Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0014777

Physical Location & Seq

Genomic Coordinates Reverse (-)

78363319 .. 78371021

Gene Structure 7703 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG568400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1344 bp

ATGGGAAGAGCTCCTTGCTGTGACAAGAATGGACTCAAGAAAGGTCCATGGACTTCTGAAGAAGATGTTGTTCTCGTCAACTATGTTCAGGAACATGGTCCAGGCAATTGGCGTAACCTCCCAAAGAACGCAGGACTCCAAAGATGTGGCAAGAGTTGCCGGCTTAGATGGACTAACTACCTGAGGCCTGATATAAAGAGAGGAAGATTTTCCTTCGAAGAAGAAGAGACTATAATCCAACTGCACAGCATCCTCGGCAACAAGTGGTCAGCTATTGCAGCTCGCCTGCCAGGAAGAACTGACAACGAAATCAAGAACTACTGGAACACACACATCCGAAAAAGGCTTCTCCGAATGGGAATCGATCCAGTCACTCACGCTCCACGCCTCGATCTTCTTGACCTATCTTCCATCCTCGGTTCCTATGTCTCCAATATCAACCCAGCTGCAGCACTTCTCAACCTGTCAAACTTGTTAGGCACACAACAAGCCCTTAATGTCAATCCAGAACTGTTGCGGTTGGTAACCACTCTCTCGTCACTGAAACAAGGAAACCAGCAAATGTTTTCACAAAACCAAAACCAGGTTTGCAATATTTCCCAGGATTTACAAAACCAGTTGGTCCCATCGTTACAGTCCAATCCTCAGTTCCAAAATCTCTTCCAAGATGACTTTTCTCCAGACATGGCAAATCTAAAACAGCTCATGCAAATGATCAATACTGAAGGCAACTTACCCAACATGTCCAACTTCAGCAGCCCAGCTTCTTATTCCCAGGAAAATATAGTCCCTAATTCCAATTTCGGTCCCGAAACAGTTGTTTCCAATTTGCCAAGCTATGTACCTAGCAGTACTTCTAATTCTACTGTTCCTGAGTTGGCAGGAAATTCATTTTTCCAATTGCCTTTAAACAACAGCAATGTTAATCATGATTTCGGGTTTGATTCTGTTCTGTCGACGCCTCATTCGAGCCCGACTACCTTGAATTCTTCGGGCACTTACAACAACATAAACAGCAGCAGCACAGAGGATGAGAGAGATCTGGAAAGCTATTGCAGCAACCTGTTGAAGTTTGAGATCCCGGACAGTACCTTGGATATCAATGATTACATGTCAACATCTACTGTTGCGATATCAGGCTTATCCATCACAATCAGTATCCCAAAAAACTGGATTAATTTGCGGTCTCCGAAAGAAGAGGAAGAGATCGAGACTAAAGAAACAAACAGACCATGTTTCTCAGTTTTTTTTTACCATGGGTTGGTGGGAGTCCGAAGCTTGAGGATAAAGGAAGTTCTGAAAAGCAGAATGCTACAAAGATCTCTGAGTAACAGGTCTAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001101 GO:0001134 GO:0001135 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006109 GO:0006355 GO:0006357 GO:0007275 GO:0008150 GO:0009719 GO:0009725 GO:0009737 GO:0009825 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016049 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032501 GO:0032502 GO:0033993 GO:0040007 GO:0042221 GO:0042335 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060255 GO:0065007 GO:0080090 GO:0080091 GO:0097159 GO:0097305 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

447

Amino Acids

50.08

Weight (kDa)

6.41

Isoelectric Point (pI)

57.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	14 - 61	7.6e-16	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	17 - 76	8.5e-12	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	67 - 111	3.5e-17	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	71 - 114	5.6e-07	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0014777)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g44400 FvH4_6g44400
malus_domestica	MD09G1097700.v1.1 MD17G1086000.v1.1
prunus_persica	Prupe.3G228500_v2.0.a1
pyrus_communis	pycom09g02180 pycom17g08350
rosa_chinensis	RchiOBHm_Chr2g0161391
rosa_multiflora	Rmu_sc0004030.1_g000007 Rmu_sc0010382.1_g000002
rosa_roxburghii	Rroxscaffold_2G00088880
rosa_rugosa	Rorug02G0488700
rosa_samantha	Rh2AG555100 Rh2BG568400 Rh2CG539000 Rh2DG578000
rosa_wichuraiana	Rw2G045930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1261
AccI	GTMKAC	1 cut(s)	956
AciI	CCGC	2 cut(s)	517, 1183
AclWI	GGATC	2 cut(s)	359, 1072
AcsI	RAATTY	2 cut(s)	886, 985
AcuI	CTGAAG	3 cut(s)	78, 736, 744
AcyI	GRCGYC	1 cut(s)	959
AfaI	GTAC	3 cut(s)	843, 853, 1090
AfiI	CCNNNNNNNGG	2 cut(s)	583, 1261
AflIII	ACRYGT	2 cut(s)	741, 1110
AgsI	TTSAA	2 cut(s)	985, 1069
AjnI	CCWGG	5 cut(s)	100, 289, 582, 600, 774
AjuI	GAANNNNNNNTTGG	2 cut(s)	632, 664
Alw21I	GWGCWC	1 cut(s)	13
Alw26I	GTCTC	4 cut(s)	221, 433, 1191, 1205
AlwI	GGATC	2 cut(s)	359, 1072
AoxI	GGCC	1 cut(s)	185
ApeKI	GCWGC	7 cut(s)	278, 446, 449, 756, 1017, 1020, 1056
ApoI	RAATTY	2 cut(s)	886, 985
ArsI	GACNNNNNNTTYG	2 cut(s)	949, 981
AseI	ATTAAT	1 cut(s)	1176
Asp700I	GAANNNNTTC	1 cut(s)	208
AspS9I	GGNCC	4 cut(s)	44, 98, 622, 806
AsuC2I	CCSGG	1 cut(s)	1082
AsuII	TTCGAA	1 cut(s)	216
AvaII	GGWCC	4 cut(s)	44, 98, 622, 806
AxyI	CCTNAGG	1 cut(s)	182
BaeGI	GKGCMC	1 cut(s)	998
BanII	GRGCYC	2 cut(s)	13, 974
BarI	GAAGNNNNNNTAC	2 cut(s)	717, 749
Bbv12I	GWGCWC	1 cut(s)	13
BbvI	GCAGC	7 cut(s)	290, 433, 461, 768, 1029, 1032, 1068
BccI	CCATC	4 cut(s)	162, 419, 634, 1154
BciT130I	CCWGG	5 cut(s)	102, 291, 584, 602, 776
BciVI	GTATCC	1 cut(s)	1169
BclI	TGATCA	1 cut(s)	714
BcnI	CCSGG	1 cut(s)	1082
BcoDI	GTCTC	4 cut(s)	221, 433, 1191, 1205
BfaI	CTAG	2 cut(s)	846, 1338
BfmI	CTRYAG	1 cut(s)	447
BfuI	GTATCC	1 cut(s)	1169
BglII	AGATCT	2 cut(s)	1039, 1319
BisI	GCNGC	7 cut(s)	279, 447, 450, 757, 1018, 1021, 1057
BlsI	GCNGC	7 cut(s)	280, 448, 451, 758, 1019, 1022, 1058
BmcAI	AGTACT	1 cut(s)	853
Bme1390I	CCNGG	6 cut(s)	102, 291, 584, 602, 776, 1082
Bme18I	GGWCC	4 cut(s)	44, 98, 622, 806
BmgT120I	GGNCC	4 cut(s)	44, 98, 622, 806
BmiI	GGNNCC	3 cut(s)	421, 624, 808
BmrFI	CCNGG	6 cut(s)	102, 291, 584, 602, 776, 1082
BmsI	GCATC	1 cut(s)	258
BpmI	CTGGAG	1 cut(s)	663
Bpu14I	TTCGAA	1 cut(s)	216
BpuEI	CTTGAG	2 cut(s)	20, 1300
BpuMI	CCSGG	1 cut(s)	1082
Bsa29I	ATCGAT	1 cut(s)	363
BsaHI	GRCGYC	1 cut(s)	959
BsaI	GGTCTC	1 cut(s)	1191
BsaJI	CCNNGG	7 cut(s)	47, 253, 415, 600, 774, 1092, 1255
BsaXI	ACNNNNNCTCC	2 cut(s)	364, 394
Bsc4I	CCNNNNNNNGG	2 cut(s)	583, 1261
Bse118I	RCCGGY	1 cut(s)	159
Bse1I	ACTGG	4 cut(s)	326, 368, 616, 1175
Bse21I	CCTNAGG	1 cut(s)	182
Bse3DI	GCAATG	1 cut(s)	925
BseBI	CCWGG	5 cut(s)	102, 291, 584, 602, 776
BseCI	ATCGAT	1 cut(s)	363
BseDI	CCNNGG	7 cut(s)	47, 253, 415, 600, 774, 1092, 1255
BseGI	GGATG	4 cut(s)	249, 333, 411, 1036
BseLI	CCNNNNNNNGG	2 cut(s)	583, 1261
BseMI	GCAATG	1 cut(s)	925
BseMII	CTCAG	5 cut(s)	173, 659, 864, 1254, 1316
BseNI	ACTGG	4 cut(s)	326, 368, 616, 1175
BseSI	GKGCMC	1 cut(s)	998
BseXI	GCAGC	7 cut(s)	290, 433, 461, 768, 1029, 1032, 1068
BseYI	CCCAGC	2 cut(s)	442, 760
BsgI	GTGCAG	1 cut(s)	227
BshFI	GGCC	1 cut(s)	187
BshVI	ATCGAT	1 cut(s)	363
BsiHKAI	GWGCWC	1 cut(s)	13
BsiSI	CCGG	2 cut(s)	160, 1082
BslFI	GGGAC	3 cut(s)	608, 773, 792
BslI	CCNNNNNNNGG	2 cut(s)	583, 1261
BsmAI	GTCTC	4 cut(s)	221, 433, 1191, 1205
BsmFI	GGGAC	3 cut(s)	608, 773, 792
BsmI	GAATGC	1 cut(s)	1314
BsnI	GGCC	1 cut(s)	187
Bso31I	GGTCTC	1 cut(s)	1191
Bsp119I	TTCGAA	1 cut(s)	216
Bsp1286I	GDGCHC	3 cut(s)	13, 974, 998
Bsp143I	GATC	7 cut(s)	364, 391, 714, 1039, 1077, 1206, 1319
Bsp19I	CCATGG	2 cut(s)	47, 1255
BspACI	CCGC	2 cut(s)	517, 1183
BspANI	GGCC	1 cut(s)	187
BspCNI	CTCAG	5 cut(s)	174, 658, 865, 1253, 1317
BspDI	ATCGAT	1 cut(s)	363
BspHI	TCATGA	1 cut(s)	928
BspLI	GGNNCC	3 cut(s)	421, 624, 808
BspMAI	CTGCAG	1 cut(s)	451
BspPI	GGATC	2 cut(s)	359, 1072
BspT104I	TTCGAA	1 cut(s)	216
BspTNI	GGTCTC	1 cut(s)	1191
BsrDI	GCAATG	1 cut(s)	925
BsrFI	RCCGGY	1 cut(s)	159
BsrI	ACTGG	4 cut(s)	326, 368, 616, 1175
BssAI	RCCGGY	1 cut(s)	159
BssECI	CCNNGG	7 cut(s)	47, 253, 415, 600, 774, 1092, 1255
BssMI	GATC	7 cut(s)	364, 391, 714, 1039, 1077, 1206, 1319
BssNI	GRCGYC	1 cut(s)	959
BssT1I	CCWWGG	3 cut(s)	47, 1092, 1255
Bst2UI	CCWGG	5 cut(s)	102, 291, 584, 602, 776
Bst4CI	ACNGT	6 cut(s)	513, 636, 817, 868, 1088, 1126
Bst6I	CTCTTC	4 cut(s)	219, 665, 1191, 1197
BstACI	GRCGYC	1 cut(s)	959
BstAPI	GCANNNNNTGC	1 cut(s)	156
BstBI	TTCGAA	1 cut(s)	216
BstC8I	GCNNGC	3 cut(s)	161, 283, 287
BstDEI	CTNAG	6 cut(s)	164, 182, 645, 873, 1240, 1325
BstDSI	CCRYGG	2 cut(s)	47, 1255
BstEII	GGTNACC	1 cut(s)	523
BstF5I	GGATG	4 cut(s)	249, 333, 411, 1036
BstKTI	GATC	7 cut(s)	367, 394, 717, 1042, 1080, 1209, 1322
BstMAI	GTCTC	4 cut(s)	221, 433, 1191, 1205
BstMBI	GATC	7 cut(s)	364, 391, 714, 1039, 1077, 1206, 1319
BstMWI	GCNNNNNNNGC	4 cut(s)	156, 255, 278, 1056
BstNI	CCWGG	5 cut(s)	102, 291, 584, 602, 776
BstNSI	RCATGY	2 cut(s)	745, 1114
BstPI	GGTNACC	1 cut(s)	523
BstSCI	CCNGG	6 cut(s)	100, 289, 582, 600, 774, 1080
BstSFI	CTRYAG	1 cut(s)	447
BstSLI	GKGCMC	1 cut(s)	998
BstV1I	GCAGC	7 cut(s)	290, 433, 461, 768, 1029, 1032, 1068
BstX2I	RGATCY	3 cut(s)	1039, 1077, 1319
BstXI	CCANNNNNNTGG	3 cut(s)	108, 146, 1170
BstYI	RGATCY	3 cut(s)	1039, 1077, 1319
Bsu15I	ATCGAT	1 cut(s)	363
Bsu36I	CCTNAGG	1 cut(s)	182
BsuI	GTATCC	1 cut(s)	1169
BsuRI	GGCC	1 cut(s)	187
BsuTUI	ATCGAT	1 cut(s)	363
BtgI	CCRYGG	2 cut(s)	47, 1255
BtsCI	GGATG	4 cut(s)	249, 333, 411, 1036
BtsIMutI	CAGTG	1 cut(s)	539
Cac8I	GCNNGC	3 cut(s)	161, 283, 287
CciI	TCATGA	1 cut(s)	928
Cfr10I	RCCGGY	1 cut(s)	159
Cfr13I	GGNCC	4 cut(s)	44, 98, 622, 806
ClaI	ATCGAT	1 cut(s)	363
CseI	GACGC	1 cut(s)	967
CsiI	ACCWGGT	1 cut(s)	582
Csp6I	GTAC	3 cut(s)	842, 852, 1089
CviAII	CATG	9 cut(s)	48, 95, 685, 706, 742, 929, 1111, 1233, 1256
CviQI	GTAC	3 cut(s)	842, 852, 1089
DdeI	CTNAG	6 cut(s)	164, 182, 645, 873, 1240, 1325
DpnI	GATC	7 cut(s)	366, 393, 716, 1041, 1079, 1208, 1321
DpnII	GATC	7 cut(s)	364, 391, 714, 1039, 1077, 1206, 1319
DraI	TTTAAA	1 cut(s)	909
Eam1104I	CTCTTC	4 cut(s)	219, 665, 1191, 1197
EarI	CTCTTC	4 cut(s)	219, 665, 1191, 1197
Ecl136II	GAGCTC	1 cut(s)	11
Eco130I	CCWWGG	3 cut(s)	47, 1092, 1255
Eco147I	AGGCCT	1 cut(s)	187
Eco24I	GRGCYC	2 cut(s)	13, 974
Eco31I	GGTCTC	1 cut(s)	1191
Eco32I	GATATC	2 cut(s)	1099, 1134
Eco47I	GGWCC	4 cut(s)	44, 98, 622, 806
Eco53kI	GAGCTC	1 cut(s)	11
Eco57I	CTGAAG	3 cut(s)	78, 736, 744
Eco81I	CCTNAGG	1 cut(s)	182
Eco91I	GGTNACC	1 cut(s)	523
EcoICRI	GAGCTC	1 cut(s)	11
EcoO65I	GGTNACC	1 cut(s)	523
EcoRI	GAATTC	1 cut(s)	985
EcoRII	CCWGG	5 cut(s)	100, 289, 582, 600, 774
EcoRV	GATATC	2 cut(s)	1099, 1134
EcoT14I	CCWWGG	3 cut(s)	47, 1092, 1255
EcoT38I	GRGCYC	2 cut(s)	13, 974
ErhI	CCWWGG	3 cut(s)	47, 1092, 1255
FaeI	CATG	9 cut(s)	51, 98, 688, 709, 745, 932, 1114, 1236, 1259
FalI	AAGNNNNNCTT	1 cut(s)	30
FaqI	GGGAC	3 cut(s)	608, 773, 792
FatI	CATG	9 cut(s)	47, 94, 684, 705, 741, 928, 1110, 1232, 1255
FbaI	TGATCA	1 cut(s)	714
FblI	GTMKAC	1 cut(s)	956
Fnu4HI	GCNGC	7 cut(s)	279, 447, 450, 757, 1018, 1021, 1057
FokI	GGATG	4 cut(s)	236, 320, 398, 1043
FriOI	GRGCYC	2 cut(s)	13, 974
Fsp4HI	GCNGC	7 cut(s)	279, 447, 450, 757, 1018, 1021, 1057
FspBI	CTAG	2 cut(s)	846, 1338
GluI	GCNGC	7 cut(s)	279, 447, 450, 757, 1018, 1021, 1057
GsaI	CCCAGC	2 cut(s)	446, 764
GsuI	CTGGAG	1 cut(s)	663
HaeIII	GGCC	1 cut(s)	187
HapII	CCGG	2 cut(s)	160, 1082
HgaI	GACGC	1 cut(s)	967
Hin1I	GRCGYC	1 cut(s)	959
Hin1II	CATG	9 cut(s)	51, 98, 688, 709, 745, 932, 1114, 1236, 1259
HincII	GTYRAC	3 cut(s)	79, 957, 1116
HindII	GTYRAC	3 cut(s)	79, 957, 1116
HindIII	AAGCTT	1 cut(s)	1276
HinfI	GANTC	5 cut(s)	33, 135, 360, 944, 1269
HpaII	CCGG	2 cut(s)	160, 1082
Hpy166II	GTNNAC	3 cut(s)	79, 957, 1116
Hpy188I	TCNGA	7 cut(s)	58, 338, 353, 1191, 1274, 1299, 1326
Hpy8I	GTNNAC	3 cut(s)	79, 957, 1116
Hpy99I	CGWCG	1 cut(s)	961
HpyAV	CCTTC	2 cut(s)	223, 719
HpyCH4III	ACNGT	6 cut(s)	513, 636, 817, 868, 1088, 1126
HpyCH4V	TGCA	6 cut(s)	244, 278, 449, 591, 709, 1056
HpyF10VI	GCNNNNNNNGC	4 cut(s)	156, 255, 278, 1056
HpyF3I	CTNAG	6 cut(s)	164, 182, 645, 873, 1240, 1325
Hsp92I	GRCGYC	1 cut(s)	959
Hsp92II	CATG	9 cut(s)	51, 98, 688, 709, 745, 932, 1114, 1236, 1259
KroI	GCCGGC	1 cut(s)	159
KroNI	GCCGGC	1 cut(s)	161
Ksp22I	TGATCA	1 cut(s)	714
Kzo9I	GATC	7 cut(s)	364, 391, 714, 1039, 1077, 1206, 1319
LmnI	GCTCC	2 cut(s)	16, 385
Lsp1109I	GCAGC	7 cut(s)	290, 433, 461, 768, 1029, 1032, 1068
LweI	GCATC	1 cut(s)	258
MabI	ACCWGGT	1 cut(s)	582
MaeI	CTAG	2 cut(s)	846, 1338
MaeIII	GTNAC	7 cut(s)	20, 113, 370, 523, 537, 630, 1328
MalI	GATC	7 cut(s)	366, 393, 716, 1041, 1079, 1208, 1321
MboI	GATC	7 cut(s)	364, 391, 714, 1039, 1077, 1206, 1319
MfeI	CAATTG	2 cut(s)	106, 899
MflI	RGATCY	3 cut(s)	1039, 1077, 1319
MhlI	GDGCHC	3 cut(s)	13, 974, 998
MluCI	AATT	9 cut(s)	106, 793, 799, 826, 859, 886, 899, 985, 1177
MlyI	GAGTC	3 cut(s)	27, 129, 1278
MmeI	TCCRAC	2 cut(s)	262, 771
MroNI	GCCGGC	1 cut(s)	159
MroXI	GAANNNNTTC	1 cut(s)	208
MseI	TTAA	4 cut(s)	495, 908, 924, 1176
MslI	CAYNNNNRTG	1 cut(s)	710
MspA1I	CMGCKG	1 cut(s)	446
MspI	CCGG	2 cut(s)	160, 1082
MspR9I	CCNGG	6 cut(s)	102, 291, 584, 602, 776, 1082
MunI	CAATTG	2 cut(s)	106, 899
Mva1269I	GAATGC	1 cut(s)	1314
MvaI	CCWGG	5 cut(s)	102, 291, 584, 602, 776
MwoI	GCNNNNNNNGC	4 cut(s)	156, 255, 278, 1056
NaeI	GCCGGC	1 cut(s)	161
NciI	CCSGG	1 cut(s)	1082
NcoI	CCATGG	2 cut(s)	47, 1255
NdeII	GATC	7 cut(s)	364, 391, 714, 1039, 1077, 1206, 1319
NgoMIV	GCCGGC	1 cut(s)	159
NlaIII	CATG	9 cut(s)	51, 98, 688, 709, 745, 932, 1114, 1236, 1259
NlaIV	GGNNCC	3 cut(s)	421, 624, 808
NmeAIII	GCCGAG	1 cut(s)	234
NmuCI	GTSAC	3 cut(s)	20, 370, 537
NspI	RCATGY	2 cut(s)	745, 1114
NspV	TTCGAA	1 cut(s)	216
PagI	TCATGA	1 cut(s)	928
PceI	AGGCCT	1 cut(s)	187
PciI	ACATGT	2 cut(s)	741, 1110
PcsI	WCGNNNNNNNCGW	1 cut(s)	965
PctI	GAATGC	1 cut(s)	1314
PdiI	GCCGGC	1 cut(s)	161
PdmI	GAANNNNTTC	1 cut(s)	208
PfeI	GAWTC	2 cut(s)	360, 944
PflMI	CCANNNNNTGG	1 cut(s)	1261
PfoI	TCCNGGA	1 cut(s)	1080
PkrI	GCNGC	7 cut(s)	280, 448, 451, 758, 1019, 1022, 1058
PleI	GAGTC	3 cut(s)	27, 129, 1277
PpsI	GAGTC	3 cut(s)	27, 129, 1277
PscI	ACATGT	2 cut(s)	741, 1110
PshBI	ATTAAT	1 cut(s)	1176
Psp124BI	GAGCTC	1 cut(s)	13
Psp6I	CCWGG	5 cut(s)	100, 289, 582, 600, 774
PspEI	GGTNACC	1 cut(s)	523
PspFI	CCCAGC	2 cut(s)	442, 760
PspGI	CCWGG	5 cut(s)	100, 289, 582, 600, 774
PspN4I	GGNNCC	3 cut(s)	421, 624, 808
PspPI	GGNCC	4 cut(s)	44, 98, 622, 806
PstI	CTGCAG	1 cut(s)	451
PsuI	RGATCY	3 cut(s)	1039, 1077, 1319
PvuII	CAGCTG	1 cut(s)	446
RsaI	GTAC	3 cut(s)	843, 853, 1090
RsaNI	GTAC	3 cut(s)	842, 852, 1089
RseI	CAYNNNNRTG	1 cut(s)	710
SacI	GAGCTC	1 cut(s)	13
SalI	GTCGAC	1 cut(s)	955
SaqAI	TTAA	4 cut(s)	495, 908, 924, 1176
SatI	GCNGC	7 cut(s)	279, 447, 450, 757, 1018, 1021, 1057
Sau3AI	GATC	7 cut(s)	364, 391, 714, 1039, 1077, 1206, 1319
Sau96I	GGNCC	4 cut(s)	44, 98, 622, 806
ScaI	AGTACT	1 cut(s)	853
SchI	GAGTC	3 cut(s)	27, 129, 1278
ScrFI	CCNGG	6 cut(s)	102, 291, 584, 602, 776, 1082
SduI	GDGCHC	3 cut(s)	13, 974, 998
SexAI	ACCWGGT	1 cut(s)	582
SfaNI	GCATC	1 cut(s)	258
SfcI	CTRYAG	1 cut(s)	447
SfuI	TTCGAA	1 cut(s)	216
SinI	GGWCC	4 cut(s)	44, 98, 622, 806
SmiMI	CAYNNNNRTG	1 cut(s)	710
SmlI	CTYRAG	2 cut(s)	35, 1279
SmoI	CTYRAG	2 cut(s)	35, 1279
Sse9I	AATT	9 cut(s)	106, 793, 799, 826, 859, 886, 899, 985, 1177
SseBI	AGGCCT	1 cut(s)	187
SsiI	CCGC	2 cut(s)	517, 1183
SspI	AATATT	1 cut(s)	595
SspMI	CTAG	2 cut(s)	846, 1338
SstI	GAGCTC	1 cut(s)	13
StuI	AGGCCT	1 cut(s)	187
StyD4I	CCNGG	6 cut(s)	100, 289, 582, 600, 774, 1080
StyI	CCWWGG	3 cut(s)	47, 1092, 1255
TaaI	ACNGT	6 cut(s)	513, 636, 817, 868, 1088, 1126
TaqI	TCGA	6 cut(s)	216, 363, 390, 956, 968, 1209
TaqII	GACCGA	1 cut(s)	794
TasI	AATT	9 cut(s)	106, 793, 799, 826, 859, 886, 899, 985, 1177
TatI	WGTACW	1 cut(s)	851
TfiI	GAWTC	2 cut(s)	360, 944
Tru1I	TTAA	4 cut(s)	495, 908, 924, 1176
Tru9I	TTAA	4 cut(s)	495, 908, 924, 1176
TscAI	CASTG	1 cut(s)	546
TseFI	GTSAC	3 cut(s)	20, 370, 537
TseI	GCWGC	7 cut(s)	278, 446, 449, 756, 1017, 1020, 1056
Tsp45I	GTSAC	3 cut(s)	20, 370, 537
TspDTI	ATGAA	1 cut(s)	879
TspRI	CASTG	1 cut(s)	546
Van91I	CCANNNNNTGG	1 cut(s)	1261
VpaK11BI	GGWCC	4 cut(s)	44, 98, 622, 806
VspI	ATTAAT	1 cut(s)	1176
XapI	RAATTY	2 cut(s)	886, 985
XceI	RCATGY	2 cut(s)	745, 1114
XmiI	GTMKAC	1 cut(s)	956
XmnI	GAANNNNTTC	1 cut(s)	208
XspI	CTAG	2 cut(s)	846, 1338
ZrmI	AGTACT	1 cut(s)	853

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.