Rh2CG060200
ERF Family

Belongs to the small GTPase superfamily. Rho family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Reverse (-)
4880625 .. 4882948
2324 bp
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UTR
Exon/CDS
Intron
Rh2CG060200.1

Sequence Viewer

Length: 435 bp
ATGAGTGCTTCAAAGTTCATTAAATGTGTTACTGTTGGGGATGGAGCTGTAGGGAAGACCTGCATGCTAATTTGCTACACCAGCAACAAGTTTCCTACTGATTATATACCCACAGTGTTTGACAATTTTAGTGCAAATGTGGCTGTGGATGGAAATATTGTCAATTTGGGGCTATGGGACACTGCAGGTCAGGAGGACTACAGCAGGTTGAGGCCACTAAGTTACAGAGGTGCAGATATATTTGTGTTGGCTTTCTCTCTAATTAGTAGAGCTAGCTATGAGAATGTTCTTAAGAAGAATGTCAAAGCGGTGTTTGACACTGCCATCAAGGCTGTTCTTCAACCTCCAAGAAGGAAGGATATAGTTAAGCAGAAAAGGCACCGAAGGTCTGGTTGCTCATTTGTGAGCATTGTCTGTGGAGGATGTGACGCTTAG

Protein Analysis

144

Amino Acids

15.81

Weight (kDa)

9.34

Isoelectric Point (pI)

39.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ras PF00071 8 - 111 8.2e-32 Ras family
Roc PF08477 8 - 99 5.8e-16 Ras of Complex, Roc, domain of DAPkinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 68, 176, 195
AccB1I GGYRCC 1 cut(s) 378
AciI CCGC 1 cut(s) 308
AflII CTTAAG 1 cut(s) 290
AgsI TTSAA 2 cut(s) 12, 341
AluBI AGCT 3 cut(s) 47, 272, 276
AluI AGCT 3 cut(s) 47, 272, 276
AoxI GGCC 1 cut(s) 212
AsuNHI GCTAGC 1 cut(s) 272
BanI GGYRCC 1 cut(s) 378
BbsI GAAGAC 1 cut(s) 62
BccI CCATC 3 cut(s) 35, 143, 332
BfaI CTAG 1 cut(s) 273
BfmI CTRYAG 3 cut(s) 48, 183, 199
BfrI CTTAAG 1 cut(s) 290
BfuAI ACCTGC 3 cut(s) 68, 176, 195
BglI GCCNNNNNGGC 1 cut(s) 329
BmiI GGNNCC 1 cut(s) 380
BmtI GCTAGC 1 cut(s) 276
BpiI GAAGAC 1 cut(s) 62
BseGI GGATG 3 cut(s) 46, 154, 428
BsgI GTGCAG 1 cut(s) 252
BshFI GGCC 1 cut(s) 214
BshNI GGYRCC 1 cut(s) 378
BslFI GGGAC 1 cut(s) 191
BsmFI GGGAC 1 cut(s) 191
BsnI GGCC 1 cut(s) 214
BspACI CCGC 1 cut(s) 308
BspANI GGCC 1 cut(s) 214
BspLI GGNNCC 1 cut(s) 380
BspMAI CTGCAG 1 cut(s) 187
BspMI ACCTGC 3 cut(s) 68, 176, 195
BspOI GCTAGC 1 cut(s) 276
BspT107I GGYRCC 1 cut(s) 378
BspTI CTTAAG 1 cut(s) 290
Bst4CI ACNGT 2 cut(s) 34, 115
BstAFI CTTAAG 1 cut(s) 290
BstC8I GCNNGC 2 cut(s) 65, 274
BstDEI CTNAG 2 cut(s) 218, 432
BstF5I GGATG 3 cut(s) 46, 154, 428
BstMWI GCNNNNNNNGC 4 cut(s) 81, 140, 329, 376
BstNSI RCATGY 1 cut(s) 67
BstSFI CTRYAG 3 cut(s) 48, 183, 199
BstV2I GAAGAC 1 cut(s) 62
BsuRI GGCC 1 cut(s) 214
BtsCI GGATG 3 cut(s) 46, 154, 428
BtsI GCAGTG 2 cut(s) 180, 318
BtsIMutI CAGTG 3 cut(s) 120, 180, 318
BveI ACCTGC 3 cut(s) 68, 176, 195
Cac8I GCNNGC 2 cut(s) 65, 274
CspCI CAANNNNNGTGG 2 cut(s) 100, 135
CviAII CATG 1 cut(s) 64
CviJI RGCY 8 cut(s) 47, 143, 172, 214, 251, 272, 276, 332
CviKI_1 RGCY 8 cut(s) 47, 143, 172, 214, 251, 272, 276, 332
DdeI CTNAG 2 cut(s) 218, 432
FaeI CATG 1 cut(s) 67
FaiI YATR 7 cut(s) 65, 105, 107, 175, 239, 279, 362
FaqI GGGAC 1 cut(s) 191
FatI CATG 1 cut(s) 63
FokI GGATG 2 cut(s) 53, 161
FspBI CTAG 1 cut(s) 273
HaeIII GGCC 1 cut(s) 214
Hin1II CATG 1 cut(s) 67
Hpy188III TCNNGA 1 cut(s) 191
HpyAV CCTTC 3 cut(s) 345, 349, 378
HpyCH4III ACNGT 2 cut(s) 34, 115
HpyCH4V TGCA 4 cut(s) 63, 134, 185, 233
HpyF10VI GCNNNNNNNGC 4 cut(s) 81, 140, 329, 376
HpyF3I CTNAG 2 cut(s) 218, 432
Hsp92II CATG 1 cut(s) 67
LmnI GCTCC 1 cut(s) 44
LpnPI CCDG 6 cut(s) 73, 94, 171, 176, 190, 375
MaeI CTAG 1 cut(s) 273
MaeIII GTNAC 3 cut(s) 28, 221, 425
MboII GAAGA 3 cut(s) 67, 307, 329
MluCI AATT 4 cut(s) 69, 124, 163, 261
MnlI CCTC 5 cut(s) 187, 204, 221, 354, 413
MseI TTAA 3 cut(s) 21, 291, 366
MspCI CTTAAG 1 cut(s) 290
MwoI GCNNNNNNNGC 4 cut(s) 81, 140, 329, 376
NheI GCTAGC 1 cut(s) 272
NlaIII CATG 1 cut(s) 67
NlaIV GGNNCC 1 cut(s) 380
NmuCI GTSAC 1 cut(s) 425
NspI RCATGY 1 cut(s) 67
PaeI GCATGC 1 cut(s) 67
PspN4I GGNNCC 1 cut(s) 380
PstI CTGCAG 1 cut(s) 187
SaqAI TTAA 3 cut(s) 21, 291, 366
SetI ASST 9 cut(s) 49, 62, 190, 209, 232, 274, 278, 346, 389
SfcI CTRYAG 3 cut(s) 48, 183, 199
SmlI CTYRAG 1 cut(s) 290
SmoI CTYRAG 1 cut(s) 290
SphI GCATGC 1 cut(s) 67
Sse9I AATT 4 cut(s) 69, 124, 163, 261
SsiI CCGC 1 cut(s) 308
SspI AATATT 1 cut(s) 157
SspMI CTAG 1 cut(s) 273
TaaI ACNGT 2 cut(s) 34, 115
TasI AATT 4 cut(s) 69, 124, 163, 261
Tru1I TTAA 3 cut(s) 21, 291, 366
Tru9I TTAA 3 cut(s) 21, 291, 366
TscAI CASTG 3 cut(s) 120, 187, 325
TseFI GTSAC 1 cut(s) 425
Tsp45I GTSAC 1 cut(s) 425
TspDTI ATGAA 1 cut(s) 7
TspRI CASTG 3 cut(s) 120, 187, 325
Vha464I CTTAAG 1 cut(s) 290
XceI RCATGY 1 cut(s) 67
XspI CTAG 1 cut(s) 273
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.