Rh2CG426700

60S ribosomal protein L18a-like protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Forward (+)
58015776 .. 58016861
1086 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG426700.1

Sequence Viewer

Length: 237 bp
ATGTTTGACAAACCCCTTCCTTTTTGTGGTTGTGGAATTGGATGGTTTTCACTTCTGCTTGGATTTGTATTCCCAGTGATGTGGTACTATGCTGCATTTCTCTACTTTTATAAATATTATGATAAAGACCCAAGGGAACGATCTGGGCTTGGTGCTTCGGCAGTAGCTGCTTCGGTTTGTACAGTTGGTGTTTTGATAGCCGTGATAGTCATTGTTATCAAATCCTTGCATCCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

78

Amino Acids

8.69

Weight (kDa)

8.5

Isoelectric Point (pI)

35.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 111
AfaI GTAC 2 cut(s) 86, 181
AfiI CCNNNNNNNGG 1 cut(s) 26
AluBI AGCT 1 cut(s) 167
AluI AGCT 1 cut(s) 167
AlwNI CAGNNNCTG 1 cut(s) 167
ApeKI GCWGC 2 cut(s) 92, 167
BbvI GCAGC 2 cut(s) 79, 154
BccI CCATC 1 cut(s) 36
BceAI ACGGC 1 cut(s) 185
BisI GCNGC 2 cut(s) 93, 168
BlsI GCNGC 2 cut(s) 94, 169
BmrI ACTGGG 1 cut(s) 68
BmuI ACTGGG 1 cut(s) 68
BsaJI CCNNGG 1 cut(s) 131
Bsc4I CCNNNNNNNGG 1 cut(s) 26
Bse1I ACTGG 1 cut(s) 74
BseDI CCNNGG 1 cut(s) 131
BseGI GGATG 2 cut(s) 47, 229
BseLI CCNNNNNNNGG 1 cut(s) 26
BseNI ACTGG 1 cut(s) 74
BseXI GCAGC 2 cut(s) 79, 154
BslI CCNNNNNNNGG 1 cut(s) 26
Bsp1407I TGTACA 1 cut(s) 179
Bsp143I GATC 1 cut(s) 140
BsrGI TGTACA 1 cut(s) 179
BsrI ACTGG 1 cut(s) 74
BssECI CCNNGG 1 cut(s) 131
BssMI GATC 1 cut(s) 140
BssT1I CCWWGG 1 cut(s) 131
Bst4CI ACNGT 1 cut(s) 184
BstAPI GCANNNNNTGC 1 cut(s) 167
BstAUI TGTACA 1 cut(s) 179
BstF5I GGATG 2 cut(s) 47, 229
BstKTI GATC 1 cut(s) 143
BstMBI GATC 1 cut(s) 140
BstMWI GCNNNNNNNGC 1 cut(s) 167
BstV1I GCAGC 2 cut(s) 79, 154
BstXI CCANNNNNNTGG 1 cut(s) 81
BtsCI GGATG 2 cut(s) 47, 229
BtsIMutI CAGTG 1 cut(s) 81
CaiI CAGNNNCTG 1 cut(s) 167
Csp6I GTAC 2 cut(s) 85, 180
CviJI RGCY 3 cut(s) 148, 167, 200
CviKI_1 RGCY 3 cut(s) 148, 167, 200
CviQI GTAC 2 cut(s) 85, 180
DpnI GATC 1 cut(s) 142
DpnII GATC 1 cut(s) 140
Eco130I CCWWGG 1 cut(s) 131
EcoT14I CCWWGG 1 cut(s) 131
ErhI CCWWGG 1 cut(s) 131
FaiI YATR 3 cut(s) 90, 111, 120
Fnu4HI GCNGC 2 cut(s) 93, 168
FokI GGATG 2 cut(s) 54, 216
Fsp4HI GCNGC 2 cut(s) 93, 168
GluI GCNGC 2 cut(s) 93, 168
HpyAV CCTTC 1 cut(s) 26
HpyCH4III ACNGT 1 cut(s) 184
HpyCH4V TGCA 2 cut(s) 95, 229
HpyF10VI GCNNNNNNNGC 1 cut(s) 167
Kzo9I GATC 1 cut(s) 140
LpnPI CCDG 2 cut(s) 87, 129
Lsp1109I GCAGC 2 cut(s) 79, 154
MalI GATC 1 cut(s) 142
MboI GATC 1 cut(s) 140
MluCI AATT 1 cut(s) 36
MwoI GCNNNNNNNGC 1 cut(s) 167
NdeII GATC 1 cut(s) 140
PkrI GCNGC 2 cut(s) 94, 169
PsiI TTATAA 1 cut(s) 111
PstNI CAGNNNCTG 1 cut(s) 167
RsaI GTAC 2 cut(s) 86, 181
RsaNI GTAC 2 cut(s) 85, 180
SatI GCNGC 2 cut(s) 93, 168
Sau3AI GATC 1 cut(s) 140
SetI ASST 1 cut(s) 169
SgeI CNNG 6 cut(s) 71, 86, 144, 156, 161, 214
Sse9I AATT 1 cut(s) 36
SspI AATATT 1 cut(s) 116
StyI CCWWGG 1 cut(s) 131
TaaI ACNGT 1 cut(s) 184
TasI AATT 1 cut(s) 36
TatI WGTACW 1 cut(s) 179
TscAI CASTG 1 cut(s) 81
TseI GCWGC 2 cut(s) 92, 167
TspGWI ACGGA 1 cut(s) 222
TspRI CASTG 1 cut(s) 81
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.