Sigma factor sigB regulation protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G37470 |
| fragaria_vesca | FvH4_1g17110 |
| malus_domestica | MD02G1181300.v1.1 MD02G1181500.v1.1 |
| prunus_persica | Prupe.6G225000_v2.0.a1 |
| pyrus_communis | pycom02g14720 pycom02g14730 |
| rosa_chinensis | RchiOBHm_Chr2g0107281 |
| rosa_laevigata | RLG00000017567 |
| rosa_multiflora | Rmu_co8389809.1_g000001 Rmu_sc0006416.1_g000017 |
| rosa_roxburghii | Rroxscaffold_2G00136470 |
| rosa_rugosa | Rorug02G0141400 |
| rosa_samantha | Rh2AG192400 Rh2BG204300 Rh2CG197600 Rh2DG199600 |
| rosa_wichuraiana | Rw2G015220 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 362 |
| Acc36I | ACCTGC | 1 cut(s) | 396 |
| AccB1I | GGYRCC | 2 cut(s) | 8, 325 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 400 |
| AccBSI | CCGCTC | 2 cut(s) | 147, 184 |
| AccII | CGCG | 1 cut(s) | 517 |
| AciI | CCGC | 5 cut(s) | 18, 63, 145, 182, 362 |
| AcsI | RAATTY | 1 cut(s) | 397 |
| AfaI | GTAC | 1 cut(s) | 386 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 27, 72, 271, 373, 400 |
| AgsI | TTSAA | 1 cut(s) | 244 |
| AjnI | CCWGG | 1 cut(s) | 161 |
| AluBI | AGCT | 4 cut(s) | 37, 49, 454, 459 |
| AluI | AGCT | 4 cut(s) | 37, 49, 454, 459 |
| Alw21I | GWGCWC | 1 cut(s) | 461 |
| Alw26I | GTCTC | 1 cut(s) | 295 |
| AoxI | GGCC | 3 cut(s) | 29, 159, 273 |
| ApeKI | GCWGC | 1 cut(s) | 484 |
| ApoI | RAATTY | 1 cut(s) | 397 |
| AspLEI | GCGC | 1 cut(s) | 170 |
| AspS9I | GGNCC | 3 cut(s) | 234, 274, 364 |
| AsuC2I | CCSGG | 1 cut(s) | 368 |
| AsuHPI | GGTGA | 1 cut(s) | 436 |
| AsuII | TTCGAA | 1 cut(s) | 135 |
| AvaII | GGWCC | 2 cut(s) | 234, 364 |
| BanI | GGYRCC | 2 cut(s) | 8, 325 |
| BanII | GRGCYC | 1 cut(s) | 461 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 105, 137 |
| BauI | CACGAG | 1 cut(s) | 298 |
| BbsI | GAAGAC | 1 cut(s) | 123 |
| Bbv12I | GWGCWC | 1 cut(s) | 461 |
| BbvCI | CCTCAGC | 1 cut(s) | 450 |
| BbvI | GCAGC | 1 cut(s) | 471 |
| BccI | CCATC | 2 cut(s) | 20, 149 |
| BceAI | ACGGC | 3 cut(s) | 5, 173, 200 |
| BciT130I | CCWGG | 1 cut(s) | 163 |
| BcnI | CCSGG | 1 cut(s) | 368 |
| BcoDI | GTCTC | 1 cut(s) | 295 |
| BfuAI | ACCTGC | 1 cut(s) | 396 |
| BisI | GCNGC | 3 cut(s) | 18, 63, 485 |
| BlpI | GCTNAGC | 1 cut(s) | 455 |
| BlsI | GCNGC | 3 cut(s) | 19, 64, 486 |
| Bme1390I | CCNGG | 2 cut(s) | 163, 368 |
| Bme18I | GGWCC | 2 cut(s) | 234, 364 |
| BmgT120I | GGNCC | 3 cut(s) | 234, 274, 364 |
| BmiI | GGNNCC | 4 cut(s) | 10, 236, 327, 366 |
| BmrFI | CCNGG | 2 cut(s) | 163, 368 |
| BmsI | GCATC | 1 cut(s) | 451 |
| BpiI | GAAGAC | 1 cut(s) | 123 |
| BpmI | CTGGAG | 1 cut(s) | 326 |
| Bpu10I | CCTNAGC | 1 cut(s) | 450 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 455 |
| Bpu14I | TTCGAA | 1 cut(s) | 135 |
| BpuMI | CCSGG | 1 cut(s) | 368 |
| BsaJI | CCNNGG | 2 cut(s) | 71, 189 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 413, 443 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 27, 72, 271, 373, 400 |
| Bse118I | RCCGGY | 1 cut(s) | 170 |
| BseBI | CCWGG | 1 cut(s) | 163 |
| BseDI | CCNNGG | 2 cut(s) | 71, 189 |
| BseGI | GGATG | 1 cut(s) | 141 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 27, 72, 271, 373, 400 |
| BseMII | CTCAG | 3 cut(s) | 280, 446, 464 |
| BseXI | GCAGC | 1 cut(s) | 471 |
| BsgI | GTGCAG | 1 cut(s) | 374 |
| Bsh1236I | CGCG | 1 cut(s) | 517 |
| Bsh1285I | CGRYCG | 2 cut(s) | 213, 417 |
| BshFI | GGCC | 3 cut(s) | 31, 161, 275 |
| BshNI | GGYRCC | 2 cut(s) | 8, 325 |
| BsiEI | CGRYCG | 2 cut(s) | 213, 417 |
| BsiHKAI | GWGCWC | 1 cut(s) | 461 |
| BsiSI | CCGG | 6 cut(s) | 32, 171, 232, 368, 464, 490 |
| BslFI | GGGAC | 1 cut(s) | 350 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 27, 72, 271, 373, 400 |
| BsmAI | GTCTC | 1 cut(s) | 295 |
| BsmFI | GGGAC | 1 cut(s) | 350 |
| BsnI | GGCC | 3 cut(s) | 31, 161, 275 |
| Bsp119I | TTCGAA | 1 cut(s) | 135 |
| Bsp1286I | GDGCHC | 1 cut(s) | 461 |
| Bsp143I | GATC | 2 cut(s) | 57, 414 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 455 |
| BspACI | CCGC | 5 cut(s) | 18, 63, 145, 182, 362 |
| BspANI | GGCC | 3 cut(s) | 31, 161, 275 |
| BspCNI | CTCAG | 3 cut(s) | 279, 447, 463 |
| BspFNI | CGCG | 1 cut(s) | 517 |
| BspHI | TCATGA | 1 cut(s) | 24 |
| BspLI | GGNNCC | 4 cut(s) | 10, 236, 327, 366 |
| BspMI | ACCTGC | 1 cut(s) | 396 |
| BspT104I | TTCGAA | 1 cut(s) | 135 |
| BspT107I | GGYRCC | 2 cut(s) | 8, 325 |
| BsrBI | CCGCTC | 2 cut(s) | 147, 184 |
| BsrFI | RCCGGY | 1 cut(s) | 170 |
| BssAI | RCCGGY | 1 cut(s) | 170 |
| BssECI | CCNNGG | 2 cut(s) | 71, 189 |
| BssMI | GATC | 2 cut(s) | 57, 414 |
| BssSI | CACGAG | 1 cut(s) | 298 |
| BssT1I | CCWWGG | 1 cut(s) | 71 |
| Bst2BI | CACGAG | 1 cut(s) | 298 |
| Bst2UI | CCWGG | 1 cut(s) | 163 |
| Bst4CI | ACNGT | 1 cut(s) | 325 |
| Bst6I | CTCTTC | 1 cut(s) | 137 |
| BstBI | TTCGAA | 1 cut(s) | 135 |
| BstC8I | GCNNGC | 3 cut(s) | 172, 186, 461 |
| BstDEI | CTNAG | 3 cut(s) | 266, 450, 455 |
| BstDSI | CCRYGG | 1 cut(s) | 189 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 70 |
| BstF5I | GGATG | 1 cut(s) | 141 |
| BstFNI | CGCG | 1 cut(s) | 517 |
| BstHHI | GCGC | 1 cut(s) | 170 |
| BstKTI | GATC | 2 cut(s) | 60, 417 |
| BstMAI | GTCTC | 1 cut(s) | 295 |
| BstMBI | GATC | 2 cut(s) | 57, 414 |
| BstMCI | CGRYCG | 2 cut(s) | 213, 417 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 167, 176, 185, 460, 490 |
| BstNI | CCWGG | 1 cut(s) | 163 |
| BstNSI | RCATGY | 1 cut(s) | 250 |
| BstSCI | CCNGG | 2 cut(s) | 161, 366 |
| BstUI | CGCG | 1 cut(s) | 517 |
| BstV1I | GCAGC | 1 cut(s) | 471 |
| BstV2I | GAAGAC | 1 cut(s) | 123 |
| BsuRI | GGCC | 3 cut(s) | 31, 161, 275 |
| BtgI | CCRYGG | 1 cut(s) | 189 |
| BtsCI | GGATG | 1 cut(s) | 141 |
| BtsIMutI | CAGTG | 1 cut(s) | 274 |
| BveI | ACCTGC | 1 cut(s) | 396 |
| Cac8I | GCNNGC | 3 cut(s) | 172, 186, 461 |
| CciI | TCATGA | 1 cut(s) | 24 |
| CfoI | GCGC | 1 cut(s) | 170 |
| Cfr10I | RCCGGY | 1 cut(s) | 170 |
| Cfr13I | GGNCC | 3 cut(s) | 234, 274, 364 |
| Csp6I | GTAC | 1 cut(s) | 385 |
| CviAII | CATG | 6 cut(s) | 25, 202, 247, 310, 316, 503 |
| CviQI | GTAC | 1 cut(s) | 385 |
| DdeI | CTNAG | 3 cut(s) | 266, 450, 455 |
| DpnI | GATC | 2 cut(s) | 59, 416 |
| DpnII | GATC | 2 cut(s) | 57, 414 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 362 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 362 |
| Eam1104I | CTCTTC | 1 cut(s) | 137 |
| EarI | CTCTTC | 1 cut(s) | 137 |
| Ecl136II | GAGCTC | 1 cut(s) | 459 |
| Eco130I | CCWWGG | 1 cut(s) | 71 |
| Eco147I | AGGCCT | 1 cut(s) | 161 |
| Eco24I | GRGCYC | 1 cut(s) | 461 |
| Eco47I | GGWCC | 2 cut(s) | 234, 364 |
| Eco53kI | GAGCTC | 1 cut(s) | 459 |
| EcoICRI | GAGCTC | 1 cut(s) | 459 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 70 |
| EcoRII | CCWGG | 1 cut(s) | 161 |
| EcoT14I | CCWWGG | 1 cut(s) | 71 |
| EcoT38I | GRGCYC | 1 cut(s) | 461 |
| ErhI | CCWWGG | 1 cut(s) | 71 |
| FaeI | CATG | 6 cut(s) | 28, 205, 250, 313, 319, 506 |
| FaqI | GGGAC | 1 cut(s) | 350 |
| FatI | CATG | 6 cut(s) | 24, 201, 246, 309, 315, 502 |
| FauI | CCCGC | 1 cut(s) | 189 |
| Fnu4HI | GCNGC | 3 cut(s) | 18, 63, 485 |
| FokI | GGATG | 1 cut(s) | 128 |
| FriOI | GRGCYC | 1 cut(s) | 461 |
| Fsp4HI | GCNGC | 3 cut(s) | 18, 63, 485 |
| GlaI | GCGC | 1 cut(s) | 169 |
| GluI | GCNGC | 3 cut(s) | 18, 63, 485 |
| GsuI | CTGGAG | 1 cut(s) | 326 |
| HaeIII | GGCC | 3 cut(s) | 31, 161, 275 |
| HapII | CCGG | 6 cut(s) | 32, 171, 232, 368, 464, 490 |
| HhaI | GCGC | 1 cut(s) | 170 |
| Hin1II | CATG | 6 cut(s) | 28, 205, 250, 313, 319, 506 |
| Hin6I | GCGC | 1 cut(s) | 168 |
| HinP1I | GCGC | 1 cut(s) | 168 |
| HinfI | GANTC | 2 cut(s) | 206, 475 |
| HpaII | CCGG | 6 cut(s) | 32, 171, 232, 368, 464, 490 |
| HphI | GGTGA | 1 cut(s) | 436 |
| Hpy188I | TCNGA | 3 cut(s) | 81, 382, 436 |
| Hpy188III | TCNNGA | 2 cut(s) | 25, 343 |
| Hpy99I | CGWCG | 1 cut(s) | 517 |
| HpyCH4III | ACNGT | 1 cut(s) | 325 |
| HpyCH4V | TGCA | 1 cut(s) | 391 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 167, 176, 185, 460, 490 |
| HpyF3I | CTNAG | 3 cut(s) | 266, 450, 455 |
| Hsp92II | CATG | 6 cut(s) | 28, 205, 250, 313, 319, 506 |
| HspAI | GCGC | 1 cut(s) | 168 |
| KroI | GCCGGC | 1 cut(s) | 170 |
| KroNI | GCCGGC | 1 cut(s) | 172 |
| Kzo9I | GATC | 2 cut(s) | 57, 414 |
| LmnI | GCTCC | 2 cut(s) | 34, 492 |
| Lsp1109I | GCAGC | 1 cut(s) | 471 |
| LweI | GCATC | 1 cut(s) | 451 |
| MaeIII | GTNAC | 1 cut(s) | 319 |
| MalI | GATC | 2 cut(s) | 59, 416 |
| MbiI | CCGCTC | 2 cut(s) | 147, 184 |
| MboI | GATC | 2 cut(s) | 57, 414 |
| MboII | GAAGA | 3 cut(s) | 124, 125, 128 |
| MhlI | GDGCHC | 1 cut(s) | 461 |
| MluCI | AATT | 1 cut(s) | 397 |
| MlyI | GAGTC | 1 cut(s) | 200 |
| MmeI | TCCRAC | 1 cut(s) | 360 |
| MnlI | CCTC | 6 cut(s) | 21, 76, 95, 275, 415, 459 |
| MroNI | GCCGGC | 1 cut(s) | 170 |
| MseI | TTAA | 2 cut(s) | 45, 351 |
| MslI | CAYNNNNRTG | 1 cut(s) | 314 |
| MspA1I | CMGCKG | 1 cut(s) | 454 |
| MspI | CCGG | 6 cut(s) | 32, 171, 232, 368, 464, 490 |
| MspR9I | CCNGG | 2 cut(s) | 163, 368 |
| MvaI | CCWGG | 1 cut(s) | 163 |
| MvnI | CGCG | 1 cut(s) | 517 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 167, 176, 185, 460, 490 |
| NaeI | GCCGGC | 1 cut(s) | 172 |
| NciI | CCSGG | 1 cut(s) | 368 |
| NdeII | GATC | 2 cut(s) | 57, 414 |
| NgoMIV | GCCGGC | 1 cut(s) | 170 |
| NlaIII | CATG | 6 cut(s) | 28, 205, 250, 313, 319, 506 |
| NlaIV | GGNNCC | 4 cut(s) | 10, 236, 327, 366 |
| NmuCI | GTSAC | 1 cut(s) | 319 |
| NspI | RCATGY | 1 cut(s) | 250 |
| NspV | TTCGAA | 1 cut(s) | 135 |
| PagI | TCATGA | 1 cut(s) | 24 |
| PceI | AGGCCT | 1 cut(s) | 161 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 105 |
| PdiI | GCCGGC | 1 cut(s) | 172 |
| PfeI | GAWTC | 1 cut(s) | 475 |
| PflFI | GACNNNGTC | 1 cut(s) | 209 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 400 |
| PkrI | GCNGC | 3 cut(s) | 19, 64, 486 |
| Ple19I | CGATCG | 1 cut(s) | 417 |
| PleI | GAGTC | 1 cut(s) | 200 |
| PpsI | GAGTC | 1 cut(s) | 200 |
| Psp124BI | GAGCTC | 1 cut(s) | 461 |
| Psp6I | CCWGG | 1 cut(s) | 161 |
| PspGI | CCWGG | 1 cut(s) | 161 |
| PspN4I | GGNNCC | 4 cut(s) | 10, 236, 327, 366 |
| PspPI | GGNCC | 3 cut(s) | 234, 274, 364 |
| PsyI | GACNNNGTC | 1 cut(s) | 209 |
| PvuI | CGATCG | 1 cut(s) | 417 |
| PvuII | CAGCTG | 1 cut(s) | 454 |
| RsaI | GTAC | 1 cut(s) | 386 |
| RsaNI | GTAC | 1 cut(s) | 385 |
| RseI | CAYNNNNRTG | 1 cut(s) | 314 |
| SacI | GAGCTC | 1 cut(s) | 461 |
| SaqAI | TTAA | 2 cut(s) | 45, 351 |
| SatI | GCNGC | 3 cut(s) | 18, 63, 485 |
| Sau3AI | GATC | 2 cut(s) | 57, 414 |
| Sau96I | GGNCC | 3 cut(s) | 234, 274, 364 |
| SchI | GAGTC | 1 cut(s) | 200 |
| ScrFI | CCNGG | 2 cut(s) | 163, 368 |
| SduI | GDGCHC | 1 cut(s) | 461 |
| SetI | ASST | 8 cut(s) | 39, 51, 77, 123, 390, 426, 456, 461 |
| SfaNI | GCATC | 1 cut(s) | 451 |
| SfuI | TTCGAA | 1 cut(s) | 135 |
| SinI | GGWCC | 2 cut(s) | 234, 364 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 314 |
| Sse9I | AATT | 1 cut(s) | 397 |
| SseBI | AGGCCT | 1 cut(s) | 161 |
| SsiI | CCGC | 5 cut(s) | 18, 63, 145, 182, 362 |
| SstI | GAGCTC | 1 cut(s) | 461 |
| StuI | AGGCCT | 1 cut(s) | 161 |
| StyD4I | CCNGG | 2 cut(s) | 161, 366 |
| StyI | CCWWGG | 1 cut(s) | 71 |
| TaaI | ACNGT | 1 cut(s) | 325 |
| TaqI | TCGA | 3 cut(s) | 108, 135, 413 |
| TaqII | GACCGA | 1 cut(s) | 199 |
| TasI | AATT | 1 cut(s) | 397 |
| TauI | GCSGC | 2 cut(s) | 20, 65 |
| TfiI | GAWTC | 1 cut(s) | 475 |
| Tru1I | TTAA | 2 cut(s) | 45, 351 |
| Tru9I | TTAA | 2 cut(s) | 45, 351 |
| TscAI | CASTG | 1 cut(s) | 274 |
| TseFI | GTSAC | 1 cut(s) | 319 |
| TseI | GCWGC | 1 cut(s) | 484 |
| Tsp45I | GTSAC | 1 cut(s) | 319 |
| TspDTI | ATGAA | 1 cut(s) | 126 |
| TspGWI | ACGGA | 2 cut(s) | 104, 114 |
| TspRI | CASTG | 1 cut(s) | 274 |
| Tth111I | GACNNNGTC | 1 cut(s) | 209 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 400 |
| VpaK11BI | GGWCC | 2 cut(s) | 234, 364 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 70 |
| XapI | RAATTY | 1 cut(s) | 397 |
| XceI | RCATGY | 1 cut(s) | 250 |