Rh2DG320700

Protein NRT1 PTR FAMILY

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Reverse (-)
40015568 .. 40017942
2375 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG320700.1

Sequence Viewer

Length: 1482 bp
ATGGTTGCAAGGGACATTATGGAGCAAACCAAAGTCACCAAATCAGTTACAAGCAAGAAGCTGGGTGGCCTTAGAACCATGCCTTTTATAATAACAAATGAGGCACTTGAAAAGGTTGCAACCTATGGTCTTCAAGCAAATATGATCTTGTACTTGATCAATGAATATCACTTGGAGGTAGCCACTGGAGCAAGCATTCTGTTCTTGTGGACATCCCTATCGTACTTAACGCCTATCTTGGGGGCTTTTCTCTCTGATTCTTGGTTGGGTCGGTTTTGTGTGATCACTTTGGGAACAATCATTAGCCTACTCGGAATTGTTATTTTATGGTTTACAGCAATATTCCCAAAAGCAAGGCCAGTCCATTGTGATCTGCTATCTGGAGAAAAATGTGTTTCACCAAAGCCAGCTCAACTCTTGCTTCTGTTGTCCTCATTTGTTCTCATGTCCATCGGATCTGGTGGTATCAAACCTTGTTCAATGGCCTTTGGTGCAGACCAAATGGAAAATCCTGAAAACCCAAAGAATGCAAGCATCATGCAGAGCTTCTTCAATTGGTACTATGCATCAGTTGGACTCTCAGTCATGATTGCAGTGACAGTCATGGTTTACATTCAAGACTCGGCTGGTTGGGTTGTGGGTTTTGGAGTTGGTGCAGGAGTCATGTTGCTGTCTACTATCTTCTTTTTGCTTGGCTCTTCTGTTTATGTCAAAGTGCCTGCAAACAAGAAATTGTCTGCTGGATTTCTGCATGTGATTGCTGCAGCTTGGAAAAATAGACGCTTGGATTTGCCGCCAGAGAATTTTGATGGATGGTATAGTCTCAAAGGTTCAAATCTTGTCACCCCAACCCACAAACTAAGATATCTAAACAAAGCTTGCATGATTACAAGTGCTGAGAAGGACTTAAGCCCTGATGGGTTGGTCATAGATCCATGGAGTTTGTGCACCGTTAGACAAGTAGAGGAGCTGAAGGTCCTTATCAACGTCCTGCCCATTTGGTCCACCGGCATCATGATTGGGGTGGTCATGAACCAAAACTCATTTCCTGTCGTCCAAGCAAGCACCATGGAGAGGCATATCTTCCCCCACATCAAACTCCCAGCAGCCTCCTTCTCCATCTTTGCAATTCTCACTCTCACAATTTGGGTGGTAGTTTACGACCGGCTTCTAGTTCCATTGATATCAAAGTACACAAAGAGGCCACGTGGATTGACCCGCAAGCAACGAATAGGTGCAGGGCTAGTACTCTCTTGCTTGGCTACTGCAGTGGCAGCAGAGGTTGAGAGGCATAGAAGAAGCACTGCAATAAAAGAAGGATTTGCAAACAATGCGCACGGAGTGGTGCCTATGTCTGCAAGGTGTTGGGCATATGGGTCCTGCGAGGATAAAACGATTTGGGATGAGGATAATGATGATCATGACAAGAAAGAGGAAGAGATGAAGTCAGAAGAGTATGTAGTTGTTGTAACTGCTGCTTGA

Protein Analysis

493

Amino Acids

54.4

Weight (kDa)

8.7

Isoelectric Point (pI)

38.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 46 - 424 4.8e-08 Major Facilitator Superfamily
PTR2 PF00854 93 - 437 1.2e-57 POT family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 89
Acc16I TGCGCA 1 cut(s) 1335
AccB1I GGYRCC 1 cut(s) 1345
AccI GTMKAC 1 cut(s) 674
AciI CCGC 2 cut(s) 794, 1219
AclWI GGATC 2 cut(s) 463, 926
AcsI RAATTY 1 cut(s) 802
AcuI CTGAAG 1 cut(s) 992
AcvI CACGTG 1 cut(s) 1208
AdeI CACNNNGTG 1 cut(s) 1342
AfaI GTAC 5 cut(s) 152, 224, 560, 1193, 1248
AfiI CCNNNNNNNGG 2 cut(s) 239, 1074
AflII CTTAAG 1 cut(s) 907
AgsI TTSAA 6 cut(s) 110, 134, 480, 553, 617, 834
AhdI GACNNNNNGTC 1 cut(s) 581
AjuI GAANNNNNNNTTGG 2 cut(s) 1029, 1061
AluBI AGCT 6 cut(s) 61, 410, 546, 767, 878, 970
AluI AGCT 6 cut(s) 61, 410, 546, 767, 878, 970
Alw21I GWGCWC 1 cut(s) 950
Alw26I GTCTC 1 cut(s) 827
Alw44I GTGCAC 1 cut(s) 946
AlwI GGATC 2 cut(s) 463, 926
AoxI GGCC 4 cut(s) 67, 356, 483, 1202
ApaLI GTGCAC 1 cut(s) 946
ApeKI GCWGC 5 cut(s) 761, 764, 1106, 1274, 1475
ApoI RAATTY 1 cut(s) 802
AspLEI GCGC 1 cut(s) 1336
AspS9I GGNCC 3 cut(s) 976, 1002, 1377
AsuHPI GGTGA 3 cut(s) 28, 390, 835
AvaII GGWCC 3 cut(s) 976, 1002, 1377
BaeGI GKGCMC 1 cut(s) 950
BanI GGYRCC 1 cut(s) 1345
BbrPI CACGTG 1 cut(s) 1208
BbsI GAAGAC 1 cut(s) 122
Bbv12I GWGCWC 1 cut(s) 950
BbvI GCAGC 5 cut(s) 748, 776, 1118, 1286, 1462
BccI CCATC 5 cut(s) 458, 803, 807, 911, 1127
BclI TGATCA 3 cut(s) 156, 282, 1417
BcoDI GTCTC 1 cut(s) 827
BfaI CTAG 2 cut(s) 1172, 1244
BfmI CTRYAG 2 cut(s) 762, 1266
BfrI CTTAAG 1 cut(s) 907
BisI GCNGC 6 cut(s) 762, 765, 794, 1107, 1275, 1476
BlsI GCNGC 6 cut(s) 763, 766, 795, 1108, 1276, 1477
BmcAI AGTACT 1 cut(s) 1248
Bme18I GGWCC 3 cut(s) 976, 1002, 1377
BmeRI GACNNNNNGTC 1 cut(s) 581
BmgT120I GGNCC 3 cut(s) 976, 1002, 1377
BmiI GGNNCC 2 cut(s) 1347, 1378
BmsI GCATC 3 cut(s) 543, 575, 1020
BpiI GAAGAC 1 cut(s) 122
BpmI CTGGAG 2 cut(s) 207, 402
BsaAI YACGTR 1 cut(s) 1208
BsaJI CCNNGG 2 cut(s) 935, 1068
Bsc4I CCNNNNNNNGG 2 cut(s) 239, 1074
Bse118I RCCGGY 2 cut(s) 1007, 1164
Bse1I ACTGG 2 cut(s) 190, 359
BseDI CCNNGG 2 cut(s) 935, 1068
BseGI GGATG 3 cut(s) 212, 818, 1408
BseLI CCNNNNNNNGG 2 cut(s) 239, 1074
BseMII CTCAG 2 cut(s) 594, 888
BseNI ACTGG 2 cut(s) 190, 359
BseRI GAGGAG 1 cut(s) 980
BseSI GKGCMC 1 cut(s) 950
BseXI GCAGC 5 cut(s) 748, 776, 1118, 1286, 1462
BseYI CCCAGC 2 cut(s) 61, 1102
BsgI GTGCAG 3 cut(s) 513, 675, 1257
Bsh1285I CGRYCG 1 cut(s) 1165
BshFI GGCC 4 cut(s) 69, 358, 485, 1204
BshNI GGYRCC 1 cut(s) 1345
BsiEI CGRYCG 1 cut(s) 1165
BsiHKAI GWGCWC 1 cut(s) 950
BsiSI CCGG 2 cut(s) 1008, 1165
BslFI GGGAC 1 cut(s) 26
BslI CCNNNNNNNGG 2 cut(s) 239, 1074
BsmAI GTCTC 1 cut(s) 827
BsmFI GGGAC 1 cut(s) 26
BsmI GAATGC 2 cut(s) 195, 532
BsnI GGCC 4 cut(s) 69, 358, 485, 1204
Bsp1286I GDGCHC 1 cut(s) 950
Bsp143I GATC 7 cut(s) 144, 156, 282, 370, 455, 931, 1417
Bsp19I CCATGG 2 cut(s) 935, 1068
BspACI CCGC 2 cut(s) 794, 1219
BspANI GGCC 4 cut(s) 69, 358, 485, 1204
BspCNI CTCAG 2 cut(s) 593, 889
BspHI TCATGA 4 cut(s) 585, 1014, 1029, 1420
BspLI GGNNCC 2 cut(s) 1347, 1378
BspMAI CTGCAG 2 cut(s) 766, 1270
BspPI GGATC 2 cut(s) 463, 926
BspQI GCTCTTC 1 cut(s) 703
BspT107I GGYRCC 1 cut(s) 1345
BspTI CTTAAG 1 cut(s) 907
BsrFI RCCGGY 2 cut(s) 1007, 1164
BsrI ACTGG 2 cut(s) 190, 359
BssAI RCCGGY 2 cut(s) 1007, 1164
BssECI CCNNGG 2 cut(s) 935, 1068
BssMI GATC 7 cut(s) 144, 156, 282, 370, 455, 931, 1417
BssT1I CCWWGG 2 cut(s) 935, 1068
Bst4CI ACNGT 2 cut(s) 601, 952
Bst6I CTCTTC 3 cut(s) 703, 1431, 1446
BstAFI CTTAAG 1 cut(s) 907
BstAPI GCANNNNNTGC 1 cut(s) 1331
BstBAI YACGTR 1 cut(s) 1208
BstC8I GCNNGC 7 cut(s) 193, 408, 532, 720, 880, 1063, 1223
BstDEI CTNAG 4 cut(s) 71, 580, 860, 897
BstDSI CCRYGG 2 cut(s) 935, 1068
BstF5I GGATG 3 cut(s) 212, 818, 1408
BstHHI GCGC 1 cut(s) 1336
BstKTI GATC 7 cut(s) 147, 159, 285, 373, 458, 934, 1420
BstMAI GTCTC 1 cut(s) 827
BstMBI GATC 7 cut(s) 144, 156, 282, 370, 455, 931, 1417
BstMCI CGRYCG 1 cut(s) 1165
BstMWI GCNNNNNNNGC 4 cut(s) 188, 491, 1274, 1331
BstNSI RCATGY 1 cut(s) 755
BstSFI CTRYAG 2 cut(s) 762, 1266
BstSLI GKGCMC 1 cut(s) 950
BstV1I GCAGC 5 cut(s) 748, 776, 1118, 1286, 1462
BstV2I GAAGAC 1 cut(s) 122
BstX2I RGATCY 2 cut(s) 455, 931
BstYI RGATCY 2 cut(s) 455, 931
BsuRI GGCC 4 cut(s) 69, 358, 485, 1204
BtgI CCRYGG 2 cut(s) 935, 1068
BtsCI GGATG 3 cut(s) 212, 818, 1408
BtsI GCAGTG 3 cut(s) 600, 1275, 1302
BtsIMutI CAGTG 4 cut(s) 183, 600, 1275, 1302
Cac8I GCNNGC 7 cut(s) 193, 408, 532, 720, 880, 1063, 1223
CciI TCATGA 4 cut(s) 585, 1014, 1029, 1420
CfoI GCGC 1 cut(s) 1336
Cfr10I RCCGGY 2 cut(s) 1007, 1164
Cfr13I GGNCC 3 cut(s) 976, 1002, 1377
CseI GACGC 1 cut(s) 789
Csp6I GTAC 5 cut(s) 151, 223, 559, 1192, 1247
CspCI CAANNNNNGTGG 4 cut(s) 1131, 1166, 1194, 1229
CviQI GTAC 5 cut(s) 151, 223, 559, 1192, 1247
DdeI CTNAG 4 cut(s) 71, 580, 860, 897
DpnI GATC 7 cut(s) 146, 158, 284, 372, 457, 933, 1419
DpnII GATC 7 cut(s) 144, 156, 282, 370, 455, 931, 1417
DraIII CACNNNGTG 1 cut(s) 1342
DriI GACNNNNNGTC 1 cut(s) 581
Eam1104I CTCTTC 3 cut(s) 703, 1431, 1446
Eam1105I GACNNNNNGTC 1 cut(s) 581
EarI CTCTTC 3 cut(s) 703, 1431, 1446
Eco130I CCWWGG 2 cut(s) 935, 1068
Eco32I GATATC 2 cut(s) 866, 1185
Eco47I GGWCC 3 cut(s) 976, 1002, 1377
Eco57I CTGAAG 1 cut(s) 992
Eco72I CACGTG 1 cut(s) 1208
EcoO109I RGGNCCY 2 cut(s) 976, 1377
EcoRV GATATC 2 cut(s) 866, 1185
EcoT14I CCWWGG 2 cut(s) 935, 1068
EcoT22I ATGCAT 1 cut(s) 568
ErhI CCWWGG 2 cut(s) 935, 1068
FaqI GGGAC 1 cut(s) 26
FauI CCCGC 1 cut(s) 1226
FauNDI CATATG 1 cut(s) 1372
FbaI TGATCA 3 cut(s) 156, 282, 1417
FblI GTMKAC 1 cut(s) 674
Fnu4HI GCNGC 6 cut(s) 762, 765, 794, 1107, 1275, 1476
FokI GGATG 3 cut(s) 199, 825, 1415
Fsp4HI GCNGC 6 cut(s) 762, 765, 794, 1107, 1275, 1476
FspAI RTGCGCAY 1 cut(s) 1335
FspBI CTAG 2 cut(s) 1172, 1244
FspI TGCGCA 1 cut(s) 1335
GlaI GCGC 1 cut(s) 1335
GluI GCNGC 6 cut(s) 762, 765, 794, 1107, 1275, 1476
GsaI CCCAGC 2 cut(s) 65, 1106
GsuI CTGGAG 2 cut(s) 207, 402
HaeIII GGCC 4 cut(s) 69, 358, 485, 1204
HapII CCGG 2 cut(s) 1008, 1165
HgaI GACGC 1 cut(s) 789
HhaI GCGC 1 cut(s) 1336
Hin6I GCGC 1 cut(s) 1334
HinP1I GCGC 1 cut(s) 1334
HindIII AAGCTT 1 cut(s) 876
HinfI GANTC 4 cut(s) 257, 576, 620, 660
HpaII CCGG 2 cut(s) 1008, 1165
HphI GGTGA 3 cut(s) 28, 390, 835
Hpy166II GTNNAC 8 cut(s) 210, 333, 610, 675, 948, 1005, 1159, 1194
Hpy188I TCNGA 4 cut(s) 256, 314, 455, 1450
Hpy188III TCNNGA 7 cut(s) 381, 512, 586, 617, 1015, 1030, 1421
Hpy8I GTNNAC 8 cut(s) 210, 333, 610, 675, 948, 1005, 1159, 1194
HpyAV CCTTC 4 cut(s) 895, 967, 1123, 1310
HpyCH4III ACNGT 2 cut(s) 601, 952
HpyCH4IV ACGT 2 cut(s) 987, 1207
HpyF10VI GCNNNNNNNGC 4 cut(s) 188, 491, 1274, 1331
HpyF3I CTNAG 4 cut(s) 71, 580, 860, 897
HpySE526I ACGT 2 cut(s) 987, 1207
HspAI GCGC 1 cut(s) 1334
Ksp22I TGATCA 3 cut(s) 156, 282, 1417
Kzo9I GATC 7 cut(s) 144, 156, 282, 370, 455, 931, 1417
LguI GCTCTTC 1 cut(s) 703
LmnI GCTCC 3 cut(s) 22, 188, 967
Lsp1109I GCAGC 5 cut(s) 748, 776, 1118, 1286, 1462
LweI GCATC 3 cut(s) 543, 575, 1020
MaeI CTAG 2 cut(s) 1172, 1244
MaeII ACGT 2 cut(s) 987, 1207
MaeIII GTNAC 5 cut(s) 34, 46, 595, 841, 1468
MalI GATC 7 cut(s) 146, 158, 284, 372, 457, 933, 1419
MboI GATC 7 cut(s) 144, 156, 282, 370, 455, 931, 1417
MboII GAAGA 8 cut(s) 122, 541, 673, 690, 1075, 1308, 1448, 1463
MfeI CAATTG 1 cut(s) 553
MflI RGATCY 2 cut(s) 455, 931
MhlI GDGCHC 1 cut(s) 950
MluCI AATT 6 cut(s) 315, 553, 731, 802, 1128, 1143
MlyI GAGTC 3 cut(s) 570, 614, 669
MmeI TCCRAC 1 cut(s) 553
Mph1103I ATGCAT 1 cut(s) 568
MseI TTAA 2 cut(s) 227, 908
MspCI CTTAAG 1 cut(s) 907
MspI CCGG 2 cut(s) 1008, 1165
MunI CAATTG 1 cut(s) 553
Mva1269I GAATGC 2 cut(s) 195, 532
MwoI GCNNNNNNNGC 4 cut(s) 188, 491, 1274, 1331
NcoI CCATGG 2 cut(s) 935, 1068
NdeI CATATG 1 cut(s) 1372
NdeII GATC 7 cut(s) 144, 156, 282, 370, 455, 931, 1417
NlaIV GGNNCC 2 cut(s) 1347, 1378
NmeAIII GCCGAG 1 cut(s) 602
NmuCI GTSAC 3 cut(s) 34, 595, 841
NsbI TGCGCA 1 cut(s) 1335
NsiI ATGCAT 1 cut(s) 568
NspI RCATGY 1 cut(s) 755
PagI TCATGA 4 cut(s) 585, 1014, 1029, 1420
PciSI GCTCTTC 1 cut(s) 703
PctI GAATGC 2 cut(s) 195, 532
PfeI GAWTC 1 cut(s) 257
PkrI GCNGC 6 cut(s) 763, 766, 795, 1108, 1276, 1477
PleI GAGTC 3 cut(s) 570, 614, 668
PmaCI CACGTG 1 cut(s) 1208
PmlI CACGTG 1 cut(s) 1208
PpsI GAGTC 3 cut(s) 570, 614, 668
Ppu21I YACGTR 1 cut(s) 1208
PpuMI RGGWCCY 2 cut(s) 976, 1377
PsiI TTATAA 1 cut(s) 89
Psp5II RGGWCCY 2 cut(s) 976, 1377
PspCI CACGTG 1 cut(s) 1208
PspFI CCCAGC 2 cut(s) 61, 1102
PspN4I GGNNCC 2 cut(s) 1347, 1378
PspPI GGNCC 3 cut(s) 976, 1002, 1377
PspPPI RGGWCCY 2 cut(s) 976, 1377
PstI CTGCAG 2 cut(s) 766, 1270
PsuI RGATCY 2 cut(s) 455, 931
RsaI GTAC 5 cut(s) 152, 224, 560, 1193, 1248
RsaNI GTAC 5 cut(s) 151, 223, 559, 1192, 1247
SapI GCTCTTC 1 cut(s) 703
SaqAI TTAA 2 cut(s) 227, 908
SatI GCNGC 6 cut(s) 762, 765, 794, 1107, 1275, 1476
Sau3AI GATC 7 cut(s) 144, 156, 282, 370, 455, 931, 1417
Sau96I GGNCC 3 cut(s) 976, 1002, 1377
ScaI AGTACT 1 cut(s) 1248
SchI GAGTC 3 cut(s) 570, 614, 669
SduI GDGCHC 1 cut(s) 950
SfaNI GCATC 3 cut(s) 543, 575, 1020
SfcI CTRYAG 2 cut(s) 762, 1266
SinI GGWCC 3 cut(s) 976, 1002, 1377
SmlI CTYRAG 1 cut(s) 907
SmoI CTYRAG 1 cut(s) 907
Sse9I AATT 6 cut(s) 315, 553, 731, 802, 1128, 1143
SsiI CCGC 2 cut(s) 794, 1219
SspI AATATT 1 cut(s) 342
SspMI CTAG 2 cut(s) 1172, 1244
StyI CCWWGG 2 cut(s) 935, 1068
TaaI ACNGT 2 cut(s) 601, 952
TaiI ACGT 2 cut(s) 990, 1210
TasI AATT 6 cut(s) 315, 553, 731, 802, 1128, 1143
TatI WGTACW 3 cut(s) 150, 1191, 1246
TauI GCSGC 1 cut(s) 796
TfiI GAWTC 1 cut(s) 257
Tru1I TTAA 2 cut(s) 227, 908
Tru9I TTAA 2 cut(s) 227, 908
TscAI CASTG 4 cut(s) 190, 600, 1275, 1309
TseFI GTSAC 3 cut(s) 34, 595, 841
TseI GCWGC 5 cut(s) 761, 764, 1106, 1274, 1475
Tsp45I GTSAC 3 cut(s) 34, 595, 841
TspDTI ATGAA 3 cut(s) 177, 1046, 1457
TspGWI ACGGA 1 cut(s) 1353
TspRI CASTG 4 cut(s) 190, 600, 1275, 1309
Vha464I CTTAAG 1 cut(s) 907
VneI GTGCAC 1 cut(s) 946
VpaK11BI GGWCC 3 cut(s) 976, 1002, 1377
XapI RAATTY 1 cut(s) 802
XceI RCATGY 1 cut(s) 755
XmiI GTMKAC 1 cut(s) 674
XspI CTAG 2 cut(s) 1172, 1244
ZrmI AGTACT 1 cut(s) 1248
Zsp2I ATGCAT 1 cut(s) 568
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.