Rh3BG057500

branched-chain-amino-acid aminotransferase-like protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
Physical Location & Seq
Forward (+)
3922339 .. 3929837
7499 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG057500.1

Sequence Viewer

Length: 1491 bp
ATGGAACCTGATGGAAATAAAGTAGTAAATGAGATCATTCTTGGTCCAGGAAGCAAGAAGTATCGCTTCTGTAAGCATATAGCAAAGCAACGTGTCCCTGGCTTACCAATTGATCTAATGAAGAAAGGAAAGCATGTCATTTTGACGAGGAATCCCCTTGATATATTGCCATCCTTTGGCAAGGTTGTGCCTCCAACCCTTGTTGAGTTAGGCTTCGCAGATCTGGTCTGTATATACAGTGAGCTCTCCCAATTGGGGAAGCCCCCACCTGTCATTGATGCAGCCGAACTTCAAGAAGATCCTGAGCGTACACTGCATGGACTTTGTGAAGACTTGGATATCCCTTTTCAGTCCACAATGCTCAAGTGGGAGGCTGGTCCCAAACCAGTAGATGGCGTTTGGGCTCCATGGTGGTATGAGAGTGTGCATAAATCAACATGCTTTCAGCCAGCAAAAAAATATCCCATGCCATTTCCTTTTCCTCTGTATGATGTACTTGAGCAAAGTCTACCCTTCTACAACTTCCTTCGGCGCCATATGAGTGCATCATGCCTTATGAAGTCTGGTTTGCCTGAACCCGAACTCCCAGTTCCAGAAAATGAGAAGTTACTTGCATGGGTTGGTGATGAGATTGTTCCACGAGAGAGTGCAAAGGTTTCTGTGTTCGACTCGGTTGTCCAAGGTGGTGATTCAGTTTGGGAGGGACTTCGAGTTTACCAGGGGAAAATATTTAAGCTTGAAGAACATTTGGATAGGTTATTTGACTCAGCAAAGGCTTTGGCATTCAACAATGTTCCTACTCGTGAAGAGGTTAAAGAAGCCATATTCAGAACTCTTATTCGGAATGGAATGTTTGACAATTCACACATCCGACTAAGTTTAACTCGTGGCAAAAAGGTTACTTCTGGCATGAGCCCAGCATTCAATCTTTATGGATGCACCTTGATTGTGCTTGCTGAATGGAAACCCCCCGTGTATGACAATACAAAGGGTATAACTCTTGTTACAGCTACAACACGTCGTAATTCACCGAATAATTTGGATTCAAAGATTCACCACAATAACCTGCTCAACAATATCCTTGCAAAGATAGAAGGCAATAATGCAAGCGCTGATGATGCAATCATGCTTGACAAGGATGGTTATGTATCTGAAACAAATGCTACAAACATTTTTTTAGTGAAGAAAGGTCGTGTATTGACACCTCATGCTGATTACTGCCTTCCTGGTGTGACTCGAGCAACTGTTATGGACCTTGTGGTGCAGGAGAAGTTTCCCCTACAGGAGAGAAATATCAGCCTATCAGAGTTCCATACTGCAGATGAGGTATGGACAACCGGAACAATGGGAGAACTCAGTCCTGTTGTGAAGATTGATGGGCGTCTAGTTGGTGACGGAAAAGTGGGGCCCGTGACCCGAAGATTGCAAAATGCTTACAAACAGCTGACAGCAGAGTCTGGGGTGCCAATACCAACCTATCATGAAAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

496

Amino Acids

55.45

Weight (kDa)

6.66

Isoelectric Point (pI)

50.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sulfotransfer_5 PF19798 18 - 177 1.4e-24 Sulfotransferase domain
Aminotran_4 PF01063 232 - 458 1.3e-49 Amino-transferase class IV
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 674, 1453
Acc36I ACCTGC 1 cut(s) 1074
AccB1I GGYRCC 2 cut(s) 531, 1462
AccB7I CCANNNNNTGG 2 cut(s) 176, 392
AccI GTMKAC 1 cut(s) 508
AclWI GGATC 1 cut(s) 293
AcyI GRCGYC 2 cut(s) 532, 1381
AfaI GTAC 2 cut(s) 310, 495
AfeI AGCGCT 1 cut(s) 1111
AfiI CCNNNNNNNGG 3 cut(s) 176, 255, 392
AflIII ACRYGT 2 cut(s) 91, 1016
AgsI TTSAA 5 cut(s) 293, 740, 787, 925, 1047
AjiI CACGTC 1 cut(s) 1019
AjnI CCWGG 4 cut(s) 46, 97, 717, 1225
AloI GAACNNNNNNTCC 2 cut(s) 567, 599
AluBI AGCT 4 cut(s) 244, 736, 1010, 1444
AluI AGCT 4 cut(s) 244, 736, 1010, 1444
Alw21I GWGCWC 1 cut(s) 246
AlwI GGATC 1 cut(s) 293
AlwNI CAGNNNCTG 1 cut(s) 1457
Ama87I CYCGRG 1 cut(s) 1236
Aor51HI AGCGCT 1 cut(s) 1111
AoxI GGCC 1 cut(s) 1406
ApaI GGGCCC 1 cut(s) 1410
ApeKI GCWGC 1 cut(s) 281
AspLEI GCGC 2 cut(s) 534, 1112
AspS9I GGNCC 5 cut(s) 44, 377, 1252, 1406, 1407
AsuHPI GGTGA 5 cut(s) 635, 698, 1020, 1046, 1403
AvaI CYCGRG 1 cut(s) 1236
AvaII GGWCC 3 cut(s) 44, 377, 1252
BaeGI GKGCMC 1 cut(s) 1410
BanI GGYRCC 2 cut(s) 531, 1462
BanII GRGCYC 4 cut(s) 246, 406, 917, 1410
BauI CACGAG 3 cut(s) 639, 801, 885
BbsI GAAGAC 1 cut(s) 336
Bbv12I GWGCWC 1 cut(s) 246
BbvI GCAGC 1 cut(s) 293
BccI CCATC 5 cut(s) 5, 178, 386, 1133, 1370
BciT130I CCWGG 4 cut(s) 48, 99, 719, 1227
BfaI CTAG 1 cut(s) 1385
BfmI CTRYAG 2 cut(s) 1280, 1317
BfoI RGCGCY 2 cut(s) 535, 1113
BfuAI ACCTGC 1 cut(s) 1074
BglII AGATCT 1 cut(s) 220
BisI GCNGC 1 cut(s) 282
BlsI GCNGC 1 cut(s) 283
Bme1390I CCNGG 4 cut(s) 48, 99, 719, 1227
Bme18I GGWCC 3 cut(s) 44, 377, 1252
BmeT110I CYCGRG 1 cut(s) 1236
BmgBI CACGTC 1 cut(s) 1019
BmgT120I GGNCC 5 cut(s) 44, 377, 1252, 1406, 1407
BmiI GGNNCC 7 cut(s) 6, 379, 405, 533, 1407, 1408, 1464
BmrFI CCNGG 4 cut(s) 48, 99, 719, 1227
BmrI ACTGGG 1 cut(s) 581
BmsI GCATC 4 cut(s) 268, 554, 926, 1108
BmuI ACTGGG 1 cut(s) 581
BpiI GAAGAC 1 cut(s) 336
Bpu10I CCTNAGC 1 cut(s) 303
BpuEI CTTGAG 2 cut(s) 347, 518
BsaHI GRCGYC 2 cut(s) 532, 1381
BsaJI CCNNGG 4 cut(s) 97, 407, 679, 718
BsaWI WCCGGW 1 cut(s) 1337
BsaXI ACNNNNNCTCC 2 cut(s) 567, 597
Bsc4I CCNNNNNNNGG 3 cut(s) 176, 255, 392
Bse1I ACTGG 2 cut(s) 386, 587
BseBI CCWGG 4 cut(s) 48, 99, 719, 1227
BseDI CCNNGG 4 cut(s) 97, 407, 679, 718
BseGI GGATG 4 cut(s) 170, 867, 941, 1144
BseLI CCNNNNNNNGG 3 cut(s) 176, 255, 392
BseMII CTCAG 3 cut(s) 294, 780, 1369
BseNI ACTGG 2 cut(s) 386, 587
BseSI GKGCMC 1 cut(s) 1410
BseXI GCAGC 1 cut(s) 293
BseYI CCCAGC 1 cut(s) 916
BsgI GTGCAG 1 cut(s) 1283
BshFI GGCC 1 cut(s) 1408
BshNI GGYRCC 2 cut(s) 531, 1462
BsiHKAI GWGCWC 1 cut(s) 246
BsiHKCI CYCGRG 1 cut(s) 1236
BsiSI CCGG 1 cut(s) 1338
BslFI GGGAC 3 cut(s) 80, 363, 717
BslI CCNNNNNNNGG 3 cut(s) 176, 255, 392
BsmFI GGGAC 3 cut(s) 80, 363, 717
BsmI GAATGC 2 cut(s) 782, 920
BsnI GGCC 1 cut(s) 1408
BsoBI CYCGRG 1 cut(s) 1236
Bsp120I GGGCCC 1 cut(s) 1406
Bsp1286I GDGCHC 4 cut(s) 246, 406, 917, 1410
Bsp143I GATC 4 cut(s) 33, 112, 220, 298
Bsp19I CCATGG 1 cut(s) 407
BspANI GGCC 1 cut(s) 1408
BspCNI CTCAG 3 cut(s) 295, 779, 1368
BspHI TCATGA 1 cut(s) 1480
BspLI GGNNCC 7 cut(s) 6, 379, 405, 533, 1407, 1408, 1464
BspMAI CTGCAG 1 cut(s) 1321
BspMI ACCTGC 1 cut(s) 1074
BspPI GGATC 1 cut(s) 293
BspT107I GGYRCC 2 cut(s) 531, 1462
BsrI ACTGG 2 cut(s) 386, 587
BssECI CCNNGG 4 cut(s) 97, 407, 679, 718
BssMI GATC 4 cut(s) 33, 112, 220, 298
BssNI GRCGYC 2 cut(s) 532, 1381
BssSI CACGAG 3 cut(s) 639, 801, 885
BssT1I CCWWGG 2 cut(s) 407, 679
Bst2BI CACGAG 3 cut(s) 639, 801, 885
Bst2UI CCWGG 4 cut(s) 48, 99, 719, 1227
Bst4CI ACNGT 2 cut(s) 239, 1246
Bst6I CTCTTC 1 cut(s) 801
BstACI GRCGYC 2 cut(s) 532, 1381
BstC8I GCNNGC 3 cut(s) 450, 954, 1108
BstDEI CTNAG 4 cut(s) 303, 766, 875, 1355
BstDSI CCRYGG 1 cut(s) 407
BstF5I GGATG 4 cut(s) 170, 867, 941, 1144
BstH2I RGCGCY 2 cut(s) 535, 1113
BstHHI GCGC 2 cut(s) 534, 1112
BstKTI GATC 4 cut(s) 36, 115, 223, 301
BstMBI GATC 4 cut(s) 33, 112, 220, 298
BstMWI GCNNNNNNNGC 2 cut(s) 313, 1118
BstNI CCWGG 4 cut(s) 48, 99, 719, 1227
BstNSI RCATGY 2 cut(s) 137, 441
BstSCI CCNGG 4 cut(s) 46, 97, 717, 1225
BstSFI CTRYAG 2 cut(s) 1280, 1317
BstSLI GKGCMC 1 cut(s) 1410
BstV1I GCAGC 1 cut(s) 293
BstV2I GAAGAC 1 cut(s) 336
BstX2I RGATCY 2 cut(s) 220, 298
BstYI RGATCY 2 cut(s) 220, 298
BsuRI GGCC 1 cut(s) 1408
BtgI CCRYGG 1 cut(s) 407
BtrI CACGTC 1 cut(s) 1019
BtsCI GGATG 4 cut(s) 170, 867, 941, 1144
BtsI GCAGTG 1 cut(s) 311
BtsIMutI CAGTG 2 cut(s) 244, 311
BveI ACCTGC 1 cut(s) 1074
Cac8I GCNNGC 3 cut(s) 450, 954, 1108
CaiI CAGNNNCTG 1 cut(s) 1457
CciI TCATGA 1 cut(s) 1480
CfoI GCGC 2 cut(s) 534, 1112
Cfr13I GGNCC 5 cut(s) 44, 377, 1252, 1406, 1407
CseI GACGC 1 cut(s) 1370
Csp6I GTAC 2 cut(s) 309, 494
CviQI GTAC 2 cut(s) 309, 494
DdeI CTNAG 4 cut(s) 303, 766, 875, 1355
DinI GGCGCC 1 cut(s) 533
DpnI GATC 4 cut(s) 35, 114, 222, 300
DpnII GATC 4 cut(s) 33, 112, 220, 298
DrdI GACNNNNNNGTC 2 cut(s) 674, 1453
DseDI GACNNNNNNGTC 2 cut(s) 674, 1453
Eam1104I CTCTTC 1 cut(s) 801
EarI CTCTTC 1 cut(s) 801
Ecl136II GAGCTC 1 cut(s) 244
Eco130I CCWWGG 2 cut(s) 407, 679
Eco24I GRGCYC 4 cut(s) 246, 406, 917, 1410
Eco32I GATATC 1 cut(s) 340
Eco47I GGWCC 3 cut(s) 44, 377, 1252
Eco47III AGCGCT 1 cut(s) 1111
Eco53kI GAGCTC 1 cut(s) 244
Eco88I CYCGRG 1 cut(s) 1236
EcoICRI GAGCTC 1 cut(s) 244
EcoO109I RGGNCCY 1 cut(s) 1406
EcoRII CCWGG 4 cut(s) 46, 97, 717, 1225
EcoRV GATATC 1 cut(s) 340
EcoT14I CCWWGG 2 cut(s) 407, 679
EcoT38I GRGCYC 4 cut(s) 246, 406, 917, 1410
EgeI GGCGCC 1 cut(s) 533
EheI GGCGCC 1 cut(s) 533
ErhI CCWWGG 2 cut(s) 407, 679
FalI AAGNNNNNCTT 2 cut(s) 50, 82
FaqI GGGAC 3 cut(s) 80, 363, 717
FauNDI CATATG 1 cut(s) 537
FblI GTMKAC 1 cut(s) 508
Fnu4HI GCNGC 1 cut(s) 282
FokI GGATG 4 cut(s) 157, 854, 948, 1151
FriOI GRGCYC 4 cut(s) 246, 406, 917, 1410
Fsp4HI GCNGC 1 cut(s) 282
FspBI CTAG 1 cut(s) 1385
GlaI GCGC 2 cut(s) 533, 1111
GluI GCNGC 1 cut(s) 282
GsaI CCCAGC 1 cut(s) 920
HaeII RGCGCY 2 cut(s) 535, 1113
HaeIII GGCC 1 cut(s) 1408
HapII CCGG 1 cut(s) 1338
HgaI GACGC 1 cut(s) 1370
HhaI GCGC 2 cut(s) 534, 1112
Hin1I GRCGYC 2 cut(s) 532, 1381
Hin6I GCGC 2 cut(s) 532, 1110
HinP1I GCGC 2 cut(s) 532, 1110
HindIII AAGCTT 1 cut(s) 734
HinfI GANTC 8 cut(s) 151, 668, 689, 764, 1043, 1051, 1234, 1454
HpaII CCGG 1 cut(s) 1338
HphI GGTGA 5 cut(s) 635, 698, 1020, 1046, 1403
Hpy166II GTNNAC 4 cut(s) 311, 354, 509, 715
Hpy188I TCNGA 5 cut(s) 830, 843, 872, 1153, 1306
Hpy188III TCNNGA 5 cut(s) 293, 302, 593, 803, 1481
Hpy8I GTNNAC 4 cut(s) 311, 354, 509, 715
Hpy99I CGWCG 1 cut(s) 1023
HpyAV CCTTC 4 cut(s) 523, 536, 1088, 1232
HpyCH4III ACNGT 2 cut(s) 239, 1246
HpyCH4IV ACGT 2 cut(s) 91, 1018
HpyF10VI GCNNNNNNNGC 2 cut(s) 313, 1118
HpyF3I CTNAG 4 cut(s) 303, 766, 875, 1355
HpySE526I ACGT 2 cut(s) 91, 1018
Hsp92I GRCGYC 2 cut(s) 532, 1381
HspAI GCGC 2 cut(s) 532, 1110
KasI GGCGCC 1 cut(s) 531
Kzo9I GATC 4 cut(s) 33, 112, 220, 298
LmnI GCTCC 1 cut(s) 409
Lsp1109I GCAGC 1 cut(s) 293
LweI GCATC 4 cut(s) 268, 554, 926, 1108
MaeI CTAG 1 cut(s) 1385
MaeII ACGT 2 cut(s) 91, 1018
MaeIII GTNAC 6 cut(s) 606, 898, 1003, 1231, 1391, 1411
MalI GATC 4 cut(s) 35, 114, 222, 300
MboI GATC 4 cut(s) 33, 112, 220, 298
MboII GAAGA 8 cut(s) 133, 308, 341, 752, 818, 1195, 1381, 1431
MfeI CAATTG 2 cut(s) 108, 251
MflI RGATCY 2 cut(s) 220, 298
MhlI GDGCHC 4 cut(s) 246, 406, 917, 1410
MluCI AATT 5 cut(s) 108, 251, 859, 1024, 1036
Mly113I GGCGCC 1 cut(s) 532
MlyI GAGTC 4 cut(s) 662, 758, 1228, 1463
MmeI TCCRAC 2 cut(s) 218, 895
MnlI CCTC 8 cut(s) 141, 201, 364, 492, 694, 802, 1215, 1318
MseI TTAA 3 cut(s) 732, 813, 881
MslI CAYNNNNRTG 1 cut(s) 540
MspA1I CMGCKG 1 cut(s) 1444
MspI CCGG 1 cut(s) 1338
MspR9I CCNGG 4 cut(s) 48, 99, 719, 1227
MunI CAATTG 2 cut(s) 108, 251
Mva1269I GAATGC 2 cut(s) 782, 920
MvaI CCWGG 4 cut(s) 48, 99, 719, 1227
MwoI GCNNNNNNNGC 2 cut(s) 313, 1118
NarI GGCGCC 1 cut(s) 532
NcoI CCATGG 1 cut(s) 407
NdeI CATATG 1 cut(s) 537
NdeII GATC 4 cut(s) 33, 112, 220, 298
NlaIV GGNNCC 7 cut(s) 6, 379, 405, 533, 1407, 1408, 1464
NmuCI GTSAC 3 cut(s) 1231, 1391, 1411
NspI RCATGY 2 cut(s) 137, 441
PaeR7I CTCGAG 1 cut(s) 1236
PagI TCATGA 1 cut(s) 1480
PctI GAATGC 2 cut(s) 782, 920
PfeI GAWTC 4 cut(s) 151, 689, 1043, 1051
PflMI CCANNNNNTGG 2 cut(s) 176, 392
PfoI TCCNGGA 1 cut(s) 46
PkrI GCNGC 1 cut(s) 283
PleI GAGTC 4 cut(s) 662, 758, 1228, 1462
PluTI GGCGCC 1 cut(s) 535
PpsI GAGTC 4 cut(s) 662, 758, 1228, 1462
Psp124BI GAGCTC 1 cut(s) 246
Psp6I CCWGG 4 cut(s) 46, 97, 717, 1225
PspFI CCCAGC 1 cut(s) 916
PspGI CCWGG 4 cut(s) 46, 97, 717, 1225
PspN4I GGNNCC 7 cut(s) 6, 379, 405, 533, 1407, 1408, 1464
PspOMI GGGCCC 1 cut(s) 1406
PspPI GGNCC 5 cut(s) 44, 377, 1252, 1406, 1407
PspXI VCTCGAGB 1 cut(s) 1236
PstI CTGCAG 1 cut(s) 1321
PstNI CAGNNNCTG 1 cut(s) 1457
PsuI RGATCY 2 cut(s) 220, 298
PvuII CAGCTG 1 cut(s) 1444
RsaI GTAC 2 cut(s) 310, 495
RsaNI GTAC 2 cut(s) 309, 494
RseI CAYNNNNRTG 1 cut(s) 540
SacI GAGCTC 1 cut(s) 246
SaqAI TTAA 3 cut(s) 732, 813, 881
SatI GCNGC 1 cut(s) 282
Sau3AI GATC 4 cut(s) 33, 112, 220, 298
Sau96I GGNCC 5 cut(s) 44, 377, 1252, 1406, 1407
SchI GAGTC 4 cut(s) 662, 758, 1228, 1463
ScrFI CCNGG 4 cut(s) 48, 99, 719, 1227
SduI GDGCHC 4 cut(s) 246, 406, 917, 1410
SfaNI GCATC 4 cut(s) 268, 554, 926, 1108
SfcI CTRYAG 2 cut(s) 1280, 1317
SfoI GGCGCC 1 cut(s) 533
Sfr274I CTCGAG 1 cut(s) 1236
SinI GGWCC 3 cut(s) 44, 377, 1252
SlaI CTCGAG 1 cut(s) 1236
SmiMI CAYNNNNRTG 1 cut(s) 540
SmlI CTYRAG 3 cut(s) 362, 497, 1236
SmoI CTYRAG 3 cut(s) 362, 497, 1236
Sse9I AATT 5 cut(s) 108, 251, 859, 1024, 1036
SspDI GGCGCC 1 cut(s) 531
SspI AATATT 1 cut(s) 729
SspMI CTAG 1 cut(s) 1385
SstI GAGCTC 1 cut(s) 246
StyD4I CCNGG 4 cut(s) 46, 97, 717, 1225
StyI CCWWGG 2 cut(s) 407, 679
TaaI ACNGT 2 cut(s) 239, 1246
TaiI ACGT 2 cut(s) 94, 1021
TaqI TCGA 3 cut(s) 666, 709, 1237
TasI AATT 5 cut(s) 108, 251, 859, 1024, 1036
TatI WGTACW 1 cut(s) 493
TfiI GAWTC 4 cut(s) 151, 689, 1043, 1051
Tru1I TTAA 3 cut(s) 732, 813, 881
Tru9I TTAA 3 cut(s) 732, 813, 881
TscAI CASTG 2 cut(s) 244, 318
TseFI GTSAC 3 cut(s) 1231, 1391, 1411
TseI GCWGC 1 cut(s) 281
Tsp45I GTSAC 3 cut(s) 1231, 1391, 1411
TspDTI ATGAA 2 cut(s) 134, 572
TspGWI ACGGA 1 cut(s) 1410
TspRI CASTG 2 cut(s) 244, 318
Van91I CCANNNNNTGG 2 cut(s) 176, 392
VpaK11BI GGWCC 3 cut(s) 44, 377, 1252
XceI RCATGY 2 cut(s) 137, 441
XhoI CTCGAG 1 cut(s) 1236
XmiI GTMKAC 1 cut(s) 508
XspI CTAG 1 cut(s) 1385
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.