Rh3CG056800

branched-chain-amino-acid aminotransferase-like protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
Physical Location & Seq
Forward (+)
3922085 .. 3929837
7753 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG056800.1

Sequence Viewer

Length: 1521 bp
ATGGCAGAGCTGAAGAACCAAGGAGAGGTTGCAGTGGAGCCGATTCATTTATGGGCTACCCCAAGATCACTGAGTACAAGCCTCATGTACTCTTTTGCTCAGAGGGATGACATAGAAGTGCTTGATGAACCGCTCTACGCAACTTTCCTTCGGGTGACAGGTTTCGATAGGCCCTACAGGGAGGAAGTACTTTCCCAAATGGAACCTGATGGAAATAAAGTAGTAAATGAGATCATTCTTGGTCCAGGAAGCAAGAAGTATCGCTTCTGTAAGCATATAGCAAAGCAACGTGTCCCTGGCTTACCAATTGATCTAATGAAGAAAGGAAAGCATGTCATTTTGACGAGGAATCCCCTTGATATATTGCCATCCTTTGGCAAGGTTGTGCCTCCAACCCTTGTTGAGTTAGGCTTCGCAGATCTGGTCTGTATATACAGTGAGCTCTCCCAATTGGGGAAGCCCCCACCTGTCATTGATGCAGCCGAACTTCAAGAAGATCCTGAGCGTACACTGCATGGACTTTGTGAAGACTTGGATATCCCTTTTCAGTCCACAATGCTCAAGTGGGAGGCTGGTCCCAAACCAGTAGATGGCGTTTGGGCTCCATGGTGGTATGAGAGTGTGCATAAATCAACATGCTTTCAGCCAGCAAAAAAATATCCCATGCCATTTCCTTTTCCTCTGTATGATGTACTTGAGCAAAGTCTACCCTTCTACAACTTCCTTCGGCGCCATATGAGTGCATCATGCCTTATGAAGTCTGGTTTGCCTGAACCCGAACTCCCAGTTCCAGAAAATGAGAAGTTACTTGCATGGGTTGGTGATGAGATTGTTCCACGAGAGAGTGCAAAGGTTTCTGTGTTCGACTCGGTTGTCCAAGGTGGTGATTCAGTTTGGGAGGGACTTCGAGTTTACCAGGGGAAAATATTTAAGCTTGAAGAACATTTGGATAGGTTATTTGACTCAGCAAAGGCTTTGGCATTCAACAATGTTCCTACTCGTGAAGAGGTTAAAGAAGCCATATTCAGAACTCTTATTCGGAATGGAATGTTTGACAATTCACACATCCGACTAAGTTTAACTCGTGGCAAAAAGGTTACTTCTGGCATGAGCCCAGCATTCAATCTTTATGGATGCACCTTGATTGTGCTTGCTGAATGGAAACCCCCCGTGTATGACAATACAAAGGGTATAACTCTTGTTACAGCTACAACACGTCGTAATTCACCGAATAATTTGGATTCAAAGATTCACCACAATAACCTGCTCAACAATATCCTTGCAAAGATAGAAGGCAATAATGCAAGCGCTGATGATGCAATCATGCTTGACAAGGATGGTTATGTATCTGAAACAAATGCTACAAACATTTTTTTAGTGAAGAAAGGTCGTGTATTGACACCTCATGCTGATTACTGCCTTCCTGGTGTGACTCGAGCAACTGTAAGTAGTCATTCCCATCTTATTGCAACATATAGTACCGTACTCCCTAAATTGAACTTCACGTTGTTTAATTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

506

Amino Acids

56.86

Weight (kDa)

6.38

Isoelectric Point (pI)

48.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sulfotransfer_5 PF19798 17 - 243 3.1e-45 Sulfotransferase domain
Aminotran_4 PF01063 298 - 483 9.7e-38 Amino-transferase class IV
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 872
Acc36I ACCTGC 1 cut(s) 1272
AccB1I GGYRCC 1 cut(s) 729
AccB7I CCANNNNNTGG 2 cut(s) 374, 590
AccBSI CCGCTC 1 cut(s) 133
AccI GTMKAC 1 cut(s) 706
AciI CCGC 1 cut(s) 131
AclWI GGATC 1 cut(s) 491
AcuI CTGAAG 1 cut(s) 32
AcyI GRCGYC 1 cut(s) 730
AfaI GTAC 7 cut(s) 76, 89, 189, 508, 693, 1480, 1485
AfeI AGCGCT 1 cut(s) 1309
AfiI CCNNNNNNNGG 4 cut(s) 25, 374, 453, 590
AflIII ACRYGT 2 cut(s) 289, 1214
AgsI TTSAA 6 cut(s) 491, 938, 985, 1123, 1245, 1498
AjiI CACGTC 1 cut(s) 1217
AjnI CCWGG 4 cut(s) 244, 295, 915, 1423
AloI GAACNNNNNNTCC 2 cut(s) 765, 797
AluBI AGCT 4 cut(s) 10, 442, 934, 1208
AluI AGCT 4 cut(s) 10, 442, 934, 1208
Alw21I GWGCWC 1 cut(s) 444
AlwI GGATC 1 cut(s) 491
Ama87I CYCGRG 1 cut(s) 1434
Aor51HI AGCGCT 1 cut(s) 1309
AoxI GGCC 1 cut(s) 170
ApeKI GCWGC 1 cut(s) 479
AspLEI GCGC 2 cut(s) 732, 1310
AspS9I GGNCC 3 cut(s) 171, 242, 575
AsuHPI GGTGA 5 cut(s) 166, 833, 896, 1218, 1244
AvaI CYCGRG 1 cut(s) 1434
AvaII GGWCC 2 cut(s) 242, 575
BanI GGYRCC 1 cut(s) 729
BanII GRGCYC 3 cut(s) 444, 604, 1115
BauI CACGAG 3 cut(s) 837, 999, 1083
BbsI GAAGAC 1 cut(s) 534
Bbv12I GWGCWC 1 cut(s) 444
BbvI GCAGC 1 cut(s) 491
BccI CCATC 5 cut(s) 203, 376, 584, 1331, 1467
BciT130I CCWGG 4 cut(s) 246, 297, 917, 1425
BfmI CTRYAG 1 cut(s) 175
BfoI RGCGCY 2 cut(s) 733, 1311
BfuAI ACCTGC 1 cut(s) 1272
BglII AGATCT 1 cut(s) 418
BisI GCNGC 1 cut(s) 480
BlsI GCNGC 1 cut(s) 481
BmcAI AGTACT 1 cut(s) 189
Bme1390I CCNGG 4 cut(s) 246, 297, 917, 1425
Bme18I GGWCC 2 cut(s) 242, 575
BmeT110I CYCGRG 1 cut(s) 1434
BmgBI CACGTC 1 cut(s) 1217
BmgT120I GGNCC 3 cut(s) 171, 242, 575
BmiI GGNNCC 5 cut(s) 39, 204, 577, 603, 731
BmrFI CCNGG 4 cut(s) 246, 297, 917, 1425
BmrI ACTGGG 1 cut(s) 779
BmsI GCATC 4 cut(s) 466, 752, 1124, 1306
BmuI ACTGGG 1 cut(s) 779
BpiI GAAGAC 1 cut(s) 534
Bpu10I CCTNAGC 1 cut(s) 501
BpuEI CTTGAG 2 cut(s) 545, 716
BsaHI GRCGYC 1 cut(s) 730
BsaJI CCNNGG 5 cut(s) 19, 295, 605, 877, 916
BsaXI ACNNNNNCTCC 2 cut(s) 765, 795
Bsc4I CCNNNNNNNGG 4 cut(s) 25, 374, 453, 590
Bse1I ACTGG 2 cut(s) 584, 785
BseBI CCWGG 4 cut(s) 246, 297, 917, 1425
BseDI CCNNGG 5 cut(s) 19, 295, 605, 877, 916
BseGI GGATG 5 cut(s) 112, 368, 1065, 1139, 1342
BseLI CCNNNNNNNGG 4 cut(s) 25, 374, 453, 590
BseMII CTCAG 4 cut(s) 62, 113, 492, 978
BseNI ACTGG 2 cut(s) 584, 785
BseXI GCAGC 1 cut(s) 491
BseYI CCCAGC 1 cut(s) 1114
BshFI GGCC 1 cut(s) 172
BshNI GGYRCC 1 cut(s) 729
BsiHKAI GWGCWC 1 cut(s) 444
BsiHKCI CYCGRG 1 cut(s) 1434
BslFI GGGAC 3 cut(s) 278, 561, 915
BslI CCNNNNNNNGG 4 cut(s) 25, 374, 453, 590
BsmFI GGGAC 3 cut(s) 278, 561, 915
BsmI GAATGC 2 cut(s) 980, 1118
BsnI GGCC 1 cut(s) 172
BsoBI CYCGRG 1 cut(s) 1434
Bsp1286I GDGCHC 3 cut(s) 444, 604, 1115
Bsp143I GATC 5 cut(s) 65, 231, 310, 418, 496
Bsp19I CCATGG 1 cut(s) 605
BspACI CCGC 1 cut(s) 131
BspANI GGCC 1 cut(s) 172
BspCNI CTCAG 4 cut(s) 63, 112, 493, 977
BspLI GGNNCC 5 cut(s) 39, 204, 577, 603, 731
BspMI ACCTGC 1 cut(s) 1272
BspPI GGATC 1 cut(s) 491
BspT107I GGYRCC 1 cut(s) 729
BsrBI CCGCTC 1 cut(s) 133
BsrI ACTGG 2 cut(s) 584, 785
BssECI CCNNGG 5 cut(s) 19, 295, 605, 877, 916
BssMI GATC 5 cut(s) 65, 231, 310, 418, 496
BssNI GRCGYC 1 cut(s) 730
BssSI CACGAG 3 cut(s) 837, 999, 1083
BssT1I CCWWGG 3 cut(s) 19, 605, 877
Bst2BI CACGAG 3 cut(s) 837, 999, 1083
Bst2UI CCWGG 4 cut(s) 246, 297, 917, 1425
Bst4CI ACNGT 3 cut(s) 437, 1444, 1483
Bst6I CTCTTC 1 cut(s) 999
BstACI GRCGYC 1 cut(s) 730
BstC8I GCNNGC 3 cut(s) 648, 1152, 1306
BstDEI CTNAG 5 cut(s) 71, 99, 501, 964, 1073
BstDSI CCRYGG 1 cut(s) 605
BstF5I GGATG 5 cut(s) 112, 368, 1065, 1139, 1342
BstH2I RGCGCY 2 cut(s) 733, 1311
BstHHI GCGC 2 cut(s) 732, 1310
BstKTI GATC 5 cut(s) 68, 234, 313, 421, 499
BstMBI GATC 5 cut(s) 65, 231, 310, 418, 496
BstMWI GCNNNNNNNGC 2 cut(s) 511, 1316
BstNI CCWGG 4 cut(s) 246, 297, 917, 1425
BstNSI RCATGY 2 cut(s) 335, 639
BstSCI CCNGG 4 cut(s) 244, 295, 915, 1423
BstSFI CTRYAG 1 cut(s) 175
BstV1I GCAGC 1 cut(s) 491
BstV2I GAAGAC 1 cut(s) 534
BstX2I RGATCY 2 cut(s) 418, 496
BstYI RGATCY 2 cut(s) 418, 496
BsuRI GGCC 1 cut(s) 172
BtgI CCRYGG 1 cut(s) 605
BtrI CACGTC 1 cut(s) 1217
BtsCI GGATG 5 cut(s) 112, 368, 1065, 1139, 1342
BtsI GCAGTG 2 cut(s) 39, 509
BtsIMutI CAGTG 4 cut(s) 39, 68, 442, 509
BveI ACCTGC 1 cut(s) 1272
Cac8I GCNNGC 3 cut(s) 648, 1152, 1306
CfoI GCGC 2 cut(s) 732, 1310
Cfr13I GGNCC 3 cut(s) 171, 242, 575
Csp6I GTAC 7 cut(s) 75, 88, 188, 507, 692, 1479, 1484
CviQI GTAC 7 cut(s) 75, 88, 188, 507, 692, 1479, 1484
DdeI CTNAG 5 cut(s) 71, 99, 501, 964, 1073
DinI GGCGCC 1 cut(s) 731
DpnI GATC 5 cut(s) 67, 233, 312, 420, 498
DpnII GATC 5 cut(s) 65, 231, 310, 418, 496
DrdI GACNNNNNNGTC 1 cut(s) 872
DseDI GACNNNNNNGTC 1 cut(s) 872
Eam1104I CTCTTC 1 cut(s) 999
EarI CTCTTC 1 cut(s) 999
Ecl136II GAGCTC 1 cut(s) 442
Eco130I CCWWGG 3 cut(s) 19, 605, 877
Eco24I GRGCYC 3 cut(s) 444, 604, 1115
Eco32I GATATC 1 cut(s) 538
Eco47I GGWCC 2 cut(s) 242, 575
Eco47III AGCGCT 1 cut(s) 1309
Eco53kI GAGCTC 1 cut(s) 442
Eco57I CTGAAG 1 cut(s) 32
Eco88I CYCGRG 1 cut(s) 1434
EcoICRI GAGCTC 1 cut(s) 442
EcoO109I RGGNCCY 1 cut(s) 171
EcoRII CCWGG 4 cut(s) 244, 295, 915, 1423
EcoRV GATATC 1 cut(s) 538
EcoT14I CCWWGG 3 cut(s) 19, 605, 877
EcoT38I GRGCYC 3 cut(s) 444, 604, 1115
EgeI GGCGCC 1 cut(s) 731
EheI GGCGCC 1 cut(s) 731
ErhI CCWWGG 3 cut(s) 19, 605, 877
FalI AAGNNNNNCTT 2 cut(s) 248, 280
FaqI GGGAC 3 cut(s) 278, 561, 915
FauNDI CATATG 1 cut(s) 735
FblI GTMKAC 1 cut(s) 706
Fnu4HI GCNGC 1 cut(s) 480
FokI GGATG 5 cut(s) 119, 355, 1052, 1146, 1349
FriOI GRGCYC 3 cut(s) 444, 604, 1115
Fsp4HI GCNGC 1 cut(s) 480
GlaI GCGC 2 cut(s) 731, 1309
GluI GCNGC 1 cut(s) 480
GsaI CCCAGC 1 cut(s) 1118
HaeII RGCGCY 2 cut(s) 733, 1311
HaeIII GGCC 1 cut(s) 172
HhaI GCGC 2 cut(s) 732, 1310
Hin1I GRCGYC 1 cut(s) 730
Hin6I GCGC 2 cut(s) 730, 1308
HinP1I GCGC 2 cut(s) 730, 1308
HindIII AAGCTT 1 cut(s) 932
HinfI GANTC 8 cut(s) 43, 349, 866, 887, 962, 1241, 1249, 1432
HphI GGTGA 5 cut(s) 166, 833, 896, 1218, 1244
Hpy166II GTNNAC 4 cut(s) 509, 552, 707, 913
Hpy188I TCNGA 5 cut(s) 102, 1028, 1041, 1070, 1351
Hpy188III TCNNGA 4 cut(s) 491, 500, 791, 1001
Hpy8I GTNNAC 4 cut(s) 509, 552, 707, 913
Hpy99I CGWCG 1 cut(s) 1221
HpyAV CCTTC 5 cut(s) 158, 721, 734, 1286, 1430
HpyCH4III ACNGT 3 cut(s) 437, 1444, 1483
HpyCH4IV ACGT 3 cut(s) 289, 1216, 1505
HpyF10VI GCNNNNNNNGC 2 cut(s) 511, 1316
HpyF3I CTNAG 5 cut(s) 71, 99, 501, 964, 1073
HpySE526I ACGT 3 cut(s) 289, 1216, 1505
Hsp92I GRCGYC 1 cut(s) 730
HspAI GCGC 2 cut(s) 730, 1308
KasI GGCGCC 1 cut(s) 729
Kzo9I GATC 5 cut(s) 65, 231, 310, 418, 496
LmnI GCTCC 2 cut(s) 37, 607
Lsp1109I GCAGC 1 cut(s) 491
LweI GCATC 4 cut(s) 466, 752, 1124, 1306
MaeII ACGT 3 cut(s) 289, 1216, 1505
MaeIII GTNAC 5 cut(s) 154, 804, 1096, 1201, 1429
MalI GATC 5 cut(s) 67, 233, 312, 420, 498
MbiI CCGCTC 1 cut(s) 133
MboI GATC 5 cut(s) 65, 231, 310, 418, 496
MboII GAAGA 7 cut(s) 25, 331, 506, 539, 950, 1016, 1393
MfeI CAATTG 2 cut(s) 306, 449
MflI RGATCY 2 cut(s) 418, 496
MhlI GDGCHC 3 cut(s) 444, 604, 1115
MluCI AATT 7 cut(s) 306, 449, 1057, 1222, 1234, 1493, 1513
Mly113I GGCGCC 1 cut(s) 730
MlyI GAGTC 3 cut(s) 860, 956, 1426
MmeI TCCRAC 2 cut(s) 416, 1093
MseI TTAA 4 cut(s) 930, 1011, 1079, 1512
MslI CAYNNNNRTG 2 cut(s) 116, 738
MspR9I CCNGG 4 cut(s) 246, 297, 917, 1425
MunI CAATTG 2 cut(s) 306, 449
Mva1269I GAATGC 2 cut(s) 980, 1118
MvaI CCWGG 4 cut(s) 246, 297, 917, 1425
MwoI GCNNNNNNNGC 2 cut(s) 511, 1316
NarI GGCGCC 1 cut(s) 730
NcoI CCATGG 1 cut(s) 605
NdeI CATATG 1 cut(s) 735
NdeII GATC 5 cut(s) 65, 231, 310, 418, 496
NlaIV GGNNCC 5 cut(s) 39, 204, 577, 603, 731
NmuCI GTSAC 2 cut(s) 154, 1429
NspI RCATGY 2 cut(s) 335, 639
PaeR7I CTCGAG 1 cut(s) 1434
PctI GAATGC 2 cut(s) 980, 1118
PfeI GAWTC 5 cut(s) 43, 349, 887, 1241, 1249
PflMI CCANNNNNTGG 2 cut(s) 374, 590
PfoI TCCNGGA 1 cut(s) 244
PkrI GCNGC 1 cut(s) 481
PleI GAGTC 3 cut(s) 860, 956, 1426
PluTI GGCGCC 1 cut(s) 733
PpsI GAGTC 3 cut(s) 860, 956, 1426
Psp124BI GAGCTC 1 cut(s) 444
Psp6I CCWGG 4 cut(s) 244, 295, 915, 1423
PspFI CCCAGC 1 cut(s) 1114
PspGI CCWGG 4 cut(s) 244, 295, 915, 1423
PspN4I GGNNCC 5 cut(s) 39, 204, 577, 603, 731
PspPI GGNCC 3 cut(s) 171, 242, 575
PspXI VCTCGAGB 1 cut(s) 1434
PsuI RGATCY 2 cut(s) 418, 496
RsaI GTAC 7 cut(s) 76, 89, 189, 508, 693, 1480, 1485
RsaNI GTAC 7 cut(s) 75, 88, 188, 507, 692, 1479, 1484
RseI CAYNNNNRTG 2 cut(s) 116, 738
SacI GAGCTC 1 cut(s) 444
SaqAI TTAA 4 cut(s) 930, 1011, 1079, 1512
SatI GCNGC 1 cut(s) 480
Sau3AI GATC 5 cut(s) 65, 231, 310, 418, 496
Sau96I GGNCC 3 cut(s) 171, 242, 575
ScaI AGTACT 1 cut(s) 189
SchI GAGTC 3 cut(s) 860, 956, 1426
ScrFI CCNGG 4 cut(s) 246, 297, 917, 1425
SduI GDGCHC 3 cut(s) 444, 604, 1115
SfaNI GCATC 4 cut(s) 466, 752, 1124, 1306
SfcI CTRYAG 1 cut(s) 175
SfoI GGCGCC 1 cut(s) 731
Sfr274I CTCGAG 1 cut(s) 1434
SinI GGWCC 2 cut(s) 242, 575
SlaI CTCGAG 1 cut(s) 1434
SmiMI CAYNNNNRTG 2 cut(s) 116, 738
SmlI CTYRAG 3 cut(s) 560, 695, 1434
SmoI CTYRAG 3 cut(s) 560, 695, 1434
Sse9I AATT 7 cut(s) 306, 449, 1057, 1222, 1234, 1493, 1513
SsiI CCGC 1 cut(s) 131
SspDI GGCGCC 1 cut(s) 729
SspI AATATT 1 cut(s) 927
SstI GAGCTC 1 cut(s) 444
StyD4I CCNGG 4 cut(s) 244, 295, 915, 1423
StyI CCWWGG 3 cut(s) 19, 605, 877
TaaI ACNGT 3 cut(s) 437, 1444, 1483
TaiI ACGT 3 cut(s) 292, 1219, 1508
TaqI TCGA 4 cut(s) 165, 864, 907, 1435
TasI AATT 7 cut(s) 306, 449, 1057, 1222, 1234, 1493, 1513
TatI WGTACW 4 cut(s) 74, 87, 187, 691
TfiI GAWTC 5 cut(s) 43, 349, 887, 1241, 1249
Tru1I TTAA 4 cut(s) 930, 1011, 1079, 1512
Tru9I TTAA 4 cut(s) 930, 1011, 1079, 1512
TscAI CASTG 4 cut(s) 39, 75, 442, 516
TseFI GTSAC 2 cut(s) 154, 1429
TseI GCWGC 1 cut(s) 479
Tsp45I GTSAC 2 cut(s) 154, 1429
TspDTI ATGAA 4 cut(s) 35, 141, 332, 770
TspRI CASTG 4 cut(s) 39, 75, 442, 516
Van91I CCANNNNNTGG 2 cut(s) 374, 590
VpaK11BI GGWCC 2 cut(s) 242, 575
XceI RCATGY 2 cut(s) 335, 639
XhoI CTCGAG 1 cut(s) 1434
XmiI GTMKAC 1 cut(s) 706
ZrmI AGTACT 1 cut(s) 189
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.