Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3B

Orthogroup ID

OG0010775

Physical Location & Seq

Genomic Coordinates Reverse (-)

4206243 .. 4212806

Gene Structure 6564 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG062800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1737 bp

ATGGATCTAGAATCTATATCAGAGGCCACTTCAGGAGCCATAGGGTCACTGTTGAGCACCACCATTCTGTACCCACTTGACACCTGCAAAACCAGGTACCAAGCTGACGTCAGAGCCAATGATCAGGCCAAGTACAGGAACCTCTCAGACGTATTCTGGGAAGCAATATCCACTCGGCAGGTTCTTTCACTGTATCAGGGTCTGGAAACAAAAAACCTGCAATCCTTCATTTCTCAGTTTGTTTACTTTTATGGGTATAGCTACTTCAAAAGATTATATCTGGAAACCAGCGGTTCTAAATCAATAGGTACAACAGCAAACTTGATCCTTGCTGCTGCTGCTGGGGCTTGCACTGCCATTGCCACCCAGCCTCTGGATACAGCATCGTCAAGGATGCAGACAAGTGCCTTTGGAAAATCCAAAGGGCTGTGGAAGACCCTTACAGAGGGCACCTGGAGTGATGCATTTGATGGTCTTGGAATCTCCCTGTTGCTTACAGCGAACCCTGCAATTCAGTATACAGTGTTTGATCAGCTAAAACAAAGACTCCTGAAAGGAAAACAGGATAAATTGGCCAAGGGCTCATCCCGGGAAGCCCTTTCTGCCTTTTCAGCATTTGTCCTAGGTGCAGTCTCAAAAAGTGTTGCTACCGTTTTGACCTATCCTGCCATCAGGTGTAAGGTCATGATCCAAGCTGCTGACCCAGATGATGACGATAAAACCAAGGAAGCCCGCCCAAGGATCCGAAAAACGATTCCAGGAACTCTCAGTGCTATATGGAAAAGGGAAGGCATTCCAGGCTACTTCAAAGGATTGCATGCCCAGATCTTGAAAACTGTTCTGAGCTCCGCATTGCTTTTGATGATCAAGGAAAAAATTTCTGCTACTACTTGGGTTCTCATACTTGCAATCAGAAGCATTGATAACCAAAGCGTCTCGGGATCTGTTCCTGCTGCGGTTCCAGATCCAGGCCACCTCACCGTCAAATTCCAAGATTCACACCTTCAGACATTTCCTCCATCTGAGGCACAAGGGAAGATCTCTAGTGGCGCTCGCCCTCCTCGCGATGCAGATGACACATTTTCAAAACCTGTATCTGGTTCTGATGAACCCCAGCAGAGTGGTTGGCTACGTACTTTCAGTGTATCATCTTACAAGGCATATTTTGACGTTGACACTTCAGATGTTCTAGAGAGGATTAAAGACTCGCTCCTTCCATATAGTGGAGCTTTCAATGAAAAAACAACTAACAATCCAGATTTGTATGGACCTTTCTGGATATGTACCACCCTAATATTTGTTGCAGCTGCCATTGGCACCTTCGTGACATATGTAGCACACAAGGTCAAGAGTGAAGAGTGGGCATATGACATTAATGTAGTGCAATGGTCTGCTGGATTGTTCTATGGTTACGTCACTGTTGTTCCTCTTGTGCTGTATGTAATCCTTAAATACTTCTCGGCACCAGCAGGTCTCGTTCAGCTGTTTTGTCTGTATGGCTACTCCTTGTTTGTCTTTATACCAGCTTTGTGTCTCTCTGTTGTGCCCTTGGAAATTTTCCGATGGGTAATTGCAGGCGTGGCTGGGATCATGTCTGCTACTTTTGTGGCCATAAACCTTCGCGCCCACATTGTTTCAGCAGGTGAAAGCTGGTTCTTCATTGTGGCTGGGATCTTTCTGTTGCAGTTGGCTCTGGCTGTCGTGCTAAAACTCTATTTGTTCACCGTCACAGTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000295 GO:0003674 GO:0005215 GO:0005346 GO:0005347 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0005777 GO:0005778 GO:0005779 GO:0006082 GO:0006629 GO:0006631 GO:0006635 GO:0006725 GO:0006807 GO:0006810 GO:0006811 GO:0006820 GO:0006839 GO:0006855 GO:0006862 GO:0007275 GO:0008150 GO:0008152 GO:0008509 GO:0008514 GO:0009056 GO:0009062 GO:0009791 GO:0009850 GO:0009987 GO:0010817 GO:0015075 GO:0015215 GO:0015216 GO:0015217 GO:0015238 GO:0015605 GO:0015711 GO:0015748 GO:0015865 GO:0015866 GO:0015867 GO:0015868 GO:0015893 GO:0015931 GO:0015932 GO:0016020 GO:0016021 GO:0016042 GO:0016054 GO:0019395 GO:0019752 GO:0019866 GO:0022857 GO:0030258 GO:0031090 GO:0031224 GO:0031231 GO:0031300 GO:0031301 GO:0031903 GO:0031966 GO:0031967 GO:0031975 GO:0032501 GO:0032502 GO:0032787 GO:0034220 GO:0034440 GO:0034641 GO:0042221 GO:0042430 GO:0042445 GO:0042493 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0046395 GO:0046483 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0051503 GO:0055085 GO:0055114 GO:0065007 GO:0065008 GO:0071702 GO:0071704 GO:0071705 GO:0072329 GO:0080024 GO:0090351 GO:0098588 GO:0098656 GO:0098805 GO:1901264 GO:1901360 GO:1901505 GO:1901564 GO:1901575 GO:1901679

KEGG Pathways

Metabolic & Signaling

ko04146 map04146

Pfam Domains

Protein Families

Mito_carr

Protein Analysis

578

Amino Acids

63.26

Weight (kDa)

8.82

Isoelectric Point (pI)

30.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Mito_carr	PF00153	5 - 95	1.7e-14	Mitochondrial carrier protein
Mito_carr	PF00153	103 - 185	1.7e-07	Mitochondrial carrier protein
Mito_carr	PF00153	200 - 294	5.9e-12	Mitochondrial carrier protein
Yip1	PF04893	407 - 568	1.7e-15	Yip1 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010775)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05280 AT5G27490
fragaria_vesca	FvH4_6g05750 FvH4_6g05750
malus_domestica	MD04G1206000.v1.1 MD12G1220100.v1.1
prunus_persica	Prupe.6G326800_v2.0.a1 Prupe.6G326800_v2.0.a1 Prupe.6G326800_v2.0.a1
pyrus_communis	pycom04g18230 pycom12g20550
rosa_chinensis	RchiOBHm_Chr3g0454661
rosa_laevigata	RLG00000025426
rosa_roxburghii	Rroxscaffold_6G00424880
rosa_rugosa	Rorug03G0001000
rosa_samantha	Rh3AG060900 Rh3BG062800 Rh3CG061600 Rh3DG062500
rosa_wichuraiana	Rw3G004740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	92, 1631
AatII	GACGTC	1 cut(s)	111
Acc36I	ACCTGC	5 cut(s)	92, 169, 225, 1460, 1631
Acc65I	GGTACC	1 cut(s)	96
AccB1I	GGYRCC	4 cut(s)	96, 449, 1316, 1462
AccB7I	CCANNNNNTGG	2 cut(s)	373, 1223
AccI	GTMKAC	1 cut(s)	518
AccII	CGCG	2 cut(s)	1065, 1623
AciI	CCGC	4 cut(s)	291, 733, 849, 956
AclWI	GGATC	9 cut(s)	12, 319, 682, 736, 749, 949, 959, 1595, 1679
AcoI	YGGCCR	2 cut(s)	573, 1608
AcsI	RAATTY	3 cut(s)	876, 986, 1554
AcuI	CTGAAG	3 cut(s)	15, 989, 1164
AcyI	GRCGYC	1 cut(s)	108
AfaI	GTAC	6 cut(s)	71, 98, 134, 310, 1135, 1285
AfiI	CCNNNNNNNGG	7 cut(s)	135, 373, 445, 738, 968, 1097, 1223
AgsI	TTSAA	5 cut(s)	268, 808, 832, 1086, 1234
AjnI	CCWGG	5 cut(s)	92, 452, 757, 796, 967
AleI	CACNNNNGTG	1 cut(s)	1322
Alw21I	GWGCWC	2 cut(s)	59, 848
Alw26I	GTCTC	4 cut(s)	637, 940, 1478, 1538
AlwI	GGATC	9 cut(s)	12, 319, 682, 736, 749, 949, 959, 1595, 1679
AlwNI	CAGNNNCTG	2 cut(s)	202, 373
Ama87I	CYCGRG	2 cut(s)	588, 937
AoxI	GGCC	5 cut(s)	24, 126, 573, 970, 1608
ApeKI	GCWGC	7 cut(s)	332, 335, 338, 695, 953, 1304, 1307
ApoI	RAATTY	3 cut(s)	876, 986, 1554
AseI	ATTAAT	1 cut(s)	1374
Asp700I	GAANNNNTTC	1 cut(s)	792
Asp718I	GGTACC	1 cut(s)	96
AspA2I	CCTAGG	1 cut(s)	622
AspLEI	GCGC	2 cut(s)	1052, 1625
AspS9I	GGNCC	1 cut(s)	1268
AsuC2I	CCSGG	2 cut(s)	589, 590
AsuHPI	GGTGA	3 cut(s)	970, 1655, 1714
AvaI	CYCGRG	2 cut(s)	588, 937
AvaII	GGWCC	1 cut(s)	1268
AvrII	CCTAGG	1 cut(s)	622
BaeGI	GKGCMC	2 cut(s)	452, 1548
BalI	TGGCCA	2 cut(s)	575, 1610
BamHI	GGATCC	1 cut(s)	741
BanI	GGYRCC	4 cut(s)	96, 449, 1316, 1462
BanII	GRGCYC	2 cut(s)	584, 848
BarI	GAAGNNNNNNTAC	2 cut(s)	248, 280
BbsI	GAAGAC	1 cut(s)	440
Bbv12I	GWGCWC	2 cut(s)	59, 848
BbvI	GCAGC	7 cut(s)	319, 322, 325, 682, 940, 1294, 1316
BccI	CCATC	4 cut(s)	464, 677, 1027, 1557
BciT130I	CCWGG	5 cut(s)	94, 454, 759, 798, 969
BciVI	GTATCC	1 cut(s)	370
BclI	TGATCA	3 cut(s)	121, 529, 864
BcnI	CCSGG	2 cut(s)	589, 590
BcoDI	GTCTC	4 cut(s)	637, 940, 1478, 1538
BfaI	CTAG	5 cut(s)	8, 623, 1044, 1190, 1735
BfoI	RGCGCY	1 cut(s)	1053
BfuAI	ACCTGC	5 cut(s)	92, 169, 225, 1460, 1631
BfuI	GTATCC	1 cut(s)	370
BglII	AGATCT	2 cut(s)	825, 1038
BisI	GCNGC	7 cut(s)	333, 336, 339, 696, 954, 1305, 1308
BlnI	CCTAGG	1 cut(s)	622
BlsI	GCNGC	7 cut(s)	334, 337, 340, 697, 955, 1306, 1309
Bme1390I	CCNGG	7 cut(s)	94, 454, 589, 590, 759, 798, 969
Bme18I	GGWCC	1 cut(s)	1268
BmeT110I	CYCGRG	2 cut(s)	588, 937
BmgT120I	GGNCC	1 cut(s)	1268
BmiI	GGNNCC	8 cut(s)	37, 98, 140, 451, 743, 960, 1318, 1464
BmrFI	CCNGG	7 cut(s)	94, 454, 589, 590, 759, 798, 969
BmsI	GCATC	4 cut(s)	384, 392, 451, 1057
BpiI	GAAGAC	1 cut(s)	440
BpmI	CTGGAG	1 cut(s)	475
BpuMI	CCSGG	2 cut(s)	589, 590
BsaAI	YACGTR	1 cut(s)	1133
BsaHI	GRCGYC	1 cut(s)	108
BsaI	GGTCTC	1 cut(s)	1478
BsaJI	CCNNGG	6 cut(s)	576, 588, 622, 723, 737, 1548
BsaXI	ACNNNNNCTCC	4 cut(s)	531, 561, 1000, 1030
Bsc4I	CCNNNNNNNGG	7 cut(s)	135, 373, 445, 738, 968, 1097, 1223
Bse3DI	GCAATG	3 cut(s)	357, 851, 1391
BseBI	CCWGG	5 cut(s)	94, 454, 759, 798, 969
BseDI	CCNNGG	6 cut(s)	576, 588, 622, 723, 737, 1548
BseGI	GGATG	2 cut(s)	399, 584
BseLI	CCNNNNNNNGG	7 cut(s)	135, 373, 445, 738, 968, 1097, 1223
BseMI	GCAATG	3 cut(s)	357, 851, 1391
BseMII	CTCAG	5 cut(s)	159, 248, 781, 833, 1014
BseRI	GAGGAG	1 cut(s)	1050
BseSI	GKGCMC	2 cut(s)	452, 1548
BseXI	GCAGC	7 cut(s)	319, 322, 325, 682, 940, 1294, 1316
BseYI	CCCAGC	5 cut(s)	341, 366, 1113, 1583, 1667
BsgI	GTGCAG	1 cut(s)	648
Bsh1236I	CGCG	2 cut(s)	1065, 1623
BshFI	GGCC	5 cut(s)	26, 128, 575, 972, 1610
BshNI	GGYRCC	4 cut(s)	96, 449, 1316, 1462
BsiHKAI	GWGCWC	2 cut(s)	59, 848
BsiHKCI	CYCGRG	2 cut(s)	588, 937
BsiSI	CCGG	1 cut(s)	589
BslI	CCNNNNNNNGG	7 cut(s)	135, 373, 445, 738, 968, 1097, 1223
BsmAI	GTCTC	4 cut(s)	637, 940, 1478, 1538
BsmBI	CGTCTC	1 cut(s)	940
BsmI	GAATGC	1 cut(s)	792
BsnI	GGCC	5 cut(s)	26, 128, 575, 972, 1610
Bso31I	GGTCTC	1 cut(s)	1478
BsoBI	CYCGRG	2 cut(s)	588, 937
Bsp1286I	GDGCHC	5 cut(s)	59, 452, 584, 848, 1548
Bsp68I	TCGCGA	1 cut(s)	1065
BspACI	CCGC	4 cut(s)	291, 733, 849, 956
BspANI	GGCC	5 cut(s)	26, 128, 575, 972, 1610
BspCNI	CTCAG	5 cut(s)	158, 247, 780, 834, 1015
BspFNI	CGCG	2 cut(s)	1065, 1623
BspHI	TCATGA	1 cut(s)	684
BspLI	GGNNCC	8 cut(s)	37, 98, 140, 451, 743, 960, 1318, 1464
BspMI	ACCTGC	5 cut(s)	92, 169, 225, 1460, 1631
BspPI	GGATC	9 cut(s)	12, 319, 682, 736, 749, 949, 959, 1595, 1679
BspT107I	GGYRCC	4 cut(s)	96, 449, 1316, 1462
BspTNI	GGTCTC	1 cut(s)	1478
BsrDI	GCAATG	3 cut(s)	357, 851, 1391
BssECI	CCNNGG	6 cut(s)	576, 588, 622, 723, 737, 1548
BssNAI	GTATAC	1 cut(s)	519
BssNI	GRCGYC	1 cut(s)	108
BssT1I	CCWWGG	5 cut(s)	576, 622, 723, 737, 1548
Bst1107I	GTATAC	1 cut(s)	519
Bst2UI	CCWGG	5 cut(s)	94, 454, 759, 798, 969
Bst4CI	ACNGT	9 cut(s)	51, 192, 523, 652, 838, 982, 1420, 1726, 1732
Bst6I	CTCTTC	1 cut(s)	1350
BstACI	GRCGYC	1 cut(s)	108
BstBAI	YACGTR	1 cut(s)	1133
BstC8I	GCNNGC	5 cut(s)	349, 733, 819, 1054, 1576
BstDEI	CTNAG	5 cut(s)	145, 234, 767, 842, 1023
BstENI	CCTNNNNNAGG	1 cut(s)	443
BstF5I	GGATG	2 cut(s)	399, 584
BstFNI	CGCG	2 cut(s)	1065, 1623
BstH2I	RGCGCY	1 cut(s)	1053
BstHHI	GCGC	2 cut(s)	1052, 1625
BstMAI	GTCTC	4 cut(s)	637, 940, 1478, 1538
BstMWI	GCNNNNNNNGC	9 cut(s)	338, 344, 353, 506, 602, 611, 798, 1062, 1580
BstNI	CCWGG	5 cut(s)	94, 454, 759, 798, 969
BstNSI	RCATGY	1 cut(s)	821
BstSCI	CCNGG	7 cut(s)	92, 452, 587, 588, 757, 796, 967
BstSLI	GKGCMC	2 cut(s)	452, 1548
BstSNI	TACGTA	1 cut(s)	1133
BstUI	CGCG	2 cut(s)	1065, 1623
BstV1I	GCAGC	7 cut(s)	319, 322, 325, 682, 940, 1294, 1316
BstV2I	GAAGAC	1 cut(s)	440
BstX2I	RGATCY	7 cut(s)	4, 741, 825, 941, 964, 1038, 1671
BstXI	CCANNNNNNTGG	1 cut(s)	1121
BstYI	RGATCY	7 cut(s)	4, 741, 825, 941, 964, 1038, 1671
BstZ17I	GTATAC	1 cut(s)	519
BsuI	GTATCC	1 cut(s)	370
BsuRI	GGCC	5 cut(s)	26, 128, 575, 972, 1610
BtgZI	GCGATG	1 cut(s)	1080
BtsCI	GGATG	2 cut(s)	399, 584
BtsI	GCAGTG	1 cut(s)	351
BtsIMutI	CAGTG	7 cut(s)	47, 188, 351, 528, 775, 1147, 1416
BtuMI	TCGCGA	1 cut(s)	1065
BveI	ACCTGC	5 cut(s)	92, 169, 225, 1460, 1631
Cac8I	GCNNGC	5 cut(s)	349, 733, 819, 1054, 1576
CaiI	CAGNNNCTG	2 cut(s)	202, 373
CciI	TCATGA	1 cut(s)	684
CfoI	GCGC	2 cut(s)	1052, 1625
Cfr13I	GGNCC	1 cut(s)	1268
Cfr9I	CCCGGG	1 cut(s)	588
CseI	GACGC	1 cut(s)	922
CsiI	ACCWGGT	1 cut(s)	92
Csp6I	GTAC	6 cut(s)	70, 97, 133, 309, 1134, 1284
CviAII	CATG	3 cut(s)	685, 818, 1591
CviQI	GTAC	6 cut(s)	70, 97, 133, 309, 1134, 1284
DdeI	CTNAG	5 cut(s)	145, 234, 767, 842, 1023
EaeI	YGGCCR	2 cut(s)	573, 1608
Eam1104I	CTCTTC	1 cut(s)	1350
EarI	CTCTTC	1 cut(s)	1350
Ecl136II	GAGCTC	1 cut(s)	846
Eco105I	TACGTA	1 cut(s)	1133
Eco130I	CCWWGG	5 cut(s)	576, 622, 723, 737, 1548
Eco24I	GRGCYC	2 cut(s)	584, 848
Eco31I	GGTCTC	1 cut(s)	1478
Eco47I	GGWCC	1 cut(s)	1268
Eco53kI	GAGCTC	1 cut(s)	846
Eco57I	CTGAAG	3 cut(s)	15, 989, 1164
Eco88I	CYCGRG	2 cut(s)	588, 937
EcoICRI	GAGCTC	1 cut(s)	846
EcoNI	CCTNNNNNAGG	1 cut(s)	443
EcoRII	CCWGG	5 cut(s)	92, 452, 757, 796, 967
EcoT14I	CCWWGG	5 cut(s)	576, 622, 723, 737, 1548
EcoT22I	ATGCAT	1 cut(s)	466
EcoT38I	GRGCYC	2 cut(s)	584, 848
ErhI	CCWWGG	5 cut(s)	576, 622, 723, 737, 1548
Esp3I	CGTCTC	1 cut(s)	940
FaeI	CATG	3 cut(s)	688, 821, 1594
FatI	CATG	3 cut(s)	684, 817, 1590
FauI	CCCGC	1 cut(s)	740
FauNDI	CATATG	2 cut(s)	1330, 1366
FbaI	TGATCA	3 cut(s)	121, 529, 864
FblI	GTMKAC	1 cut(s)	518
Fnu4HI	GCNGC	7 cut(s)	333, 336, 339, 696, 954, 1305, 1308
FokI	GGATG	2 cut(s)	406, 571
FriOI	GRGCYC	2 cut(s)	584, 848
Fsp4HI	GCNGC	7 cut(s)	333, 336, 339, 696, 954, 1305, 1308
FspBI	CTAG	5 cut(s)	8, 623, 1044, 1190, 1735
GlaI	GCGC	2 cut(s)	1051, 1624
GluI	GCNGC	7 cut(s)	333, 336, 339, 696, 954, 1305, 1308
GsaI	CCCAGC	5 cut(s)	345, 370, 1117, 1587, 1671
GsuI	CTGGAG	1 cut(s)	475
HaeII	RGCGCY	1 cut(s)	1053
HaeIII	GGCC	5 cut(s)	26, 128, 575, 972, 1610
HapII	CCGG	1 cut(s)	589
HgaI	GACGC	1 cut(s)	922
HhaI	GCGC	2 cut(s)	1052, 1625
Hin1I	GRCGYC	1 cut(s)	108
Hin1II	CATG	3 cut(s)	688, 821, 1594
Hin6I	GCGC	2 cut(s)	1050, 1623
HinP1I	GCGC	2 cut(s)	1050, 1623
HincII	GTYRAC	1 cut(s)	1174
HindII	GTYRAC	1 cut(s)	1174
HinfI	GANTC	6 cut(s)	11, 480, 546, 754, 995, 1205
HpaII	CCGG	1 cut(s)	589
HphI	GGTGA	3 cut(s)	970, 1655, 1714
Hpy166II	GTNNAC	4 cut(s)	244, 519, 1174, 1722
Hpy8I	GTNNAC	4 cut(s)	244, 519, 1174, 1722
HpyAV	CCTTC	6 cut(s)	235, 782, 1013, 1223, 1330, 1628
HpyCH4III	ACNGT	9 cut(s)	51, 192, 523, 652, 838, 982, 1420, 1726, 1732
HpyCH4IV	ACGT	5 cut(s)	108, 150, 1132, 1170, 1413
HpyF10VI	GCNNNNNNNGC	9 cut(s)	338, 344, 353, 506, 602, 611, 798, 1062, 1580
HpyF3I	CTNAG	5 cut(s)	145, 234, 767, 842, 1023
HpySE526I	ACGT	5 cut(s)	108, 150, 1132, 1170, 1413
Hsp92I	GRCGYC	1 cut(s)	108
Hsp92II	CATG	3 cut(s)	688, 821, 1594
HspAI	GCGC	2 cut(s)	1050, 1623
KpnI	GGTACC	1 cut(s)	100
Ksp22I	TGATCA	3 cut(s)	121, 529, 864
LmnI	GCTCC	4 cut(s)	35, 851, 1215, 1226
Lsp1109I	GCAGC	7 cut(s)	319, 322, 325, 682, 940, 1294, 1316
LweI	GCATC	4 cut(s)	384, 392, 451, 1057
MabI	ACCWGGT	1 cut(s)	92
MaeI	CTAG	5 cut(s)	8, 623, 1044, 1190, 1735
MaeII	ACGT	5 cut(s)	108, 150, 1132, 1170, 1413
MaeIII	GTNAC	5 cut(s)	45, 1324, 1409, 1414, 1726
MboII	GAAGA	4 cut(s)	445, 1048, 1367, 1648
MflI	RGATCY	7 cut(s)	4, 741, 825, 941, 964, 1038, 1671
MhlI	GDGCHC	5 cut(s)	59, 452, 584, 848, 1548
MlsI	TGGCCA	2 cut(s)	575, 1610
MluCI	AATT	6 cut(s)	510, 569, 876, 986, 1554, 1569
MluNI	TGGCCA	2 cut(s)	575, 1610
MlyI	GAGTC	2 cut(s)	540, 1199
Mox20I	TGGCCA	2 cut(s)	575, 1610
Mph1103I	ATGCAT	1 cut(s)	466
MroXI	GAANNNNTTC	1 cut(s)	792
MscI	TGGCCA	2 cut(s)	575, 1610
MseI	TTAA	3 cut(s)	1200, 1374, 1449
MslI	CAYNNNNRTG	1 cut(s)	1322
Msp20I	TGGCCA	2 cut(s)	575, 1610
MspA1I	CMGCKG	3 cut(s)	291, 1307, 1483
MspI	CCGG	1 cut(s)	589
MspR9I	CCNGG	7 cut(s)	94, 454, 589, 590, 759, 798, 969
Mva1269I	GAATGC	1 cut(s)	792
MvaI	CCWGG	5 cut(s)	94, 454, 759, 798, 969
MvnI	CGCG	2 cut(s)	1065, 1623
MwoI	GCNNNNNNNGC	9 cut(s)	338, 344, 353, 506, 602, 611, 798, 1062, 1580
NciI	CCSGG	2 cut(s)	589, 590
NdeI	CATATG	2 cut(s)	1330, 1366
NlaIII	CATG	3 cut(s)	688, 821, 1594
NlaIV	GGNNCC	8 cut(s)	37, 98, 140, 451, 743, 960, 1318, 1464
NmeAIII	GCCGAG	2 cut(s)	154, 1439
NmuCI	GTSAC	4 cut(s)	45, 1324, 1414, 1726
NruI	TCGCGA	1 cut(s)	1065
NsiI	ATGCAT	1 cut(s)	466
NspI	RCATGY	1 cut(s)	821
OliI	CACNNNNGTG	1 cut(s)	1322
PaeI	GCATGC	1 cut(s)	821
PagI	TCATGA	1 cut(s)	684
PaqCI	CACCTGC	2 cut(s)	92, 1631
PctI	GAATGC	1 cut(s)	792
PdmI	GAANNNNTTC	1 cut(s)	792
PfeI	GAWTC	4 cut(s)	11, 480, 754, 995
PflMI	CCANNNNNTGG	2 cut(s)	373, 1223
PfoI	TCCNGGA	1 cut(s)	757
PkrI	GCNGC	7 cut(s)	334, 337, 340, 697, 955, 1306, 1309
PleI	GAGTC	2 cut(s)	540, 1199
PpsI	GAGTC	2 cut(s)	540, 1199
Ppu21I	YACGTR	1 cut(s)	1133
PshBI	ATTAAT	1 cut(s)	1374
Psp124BI	GAGCTC	1 cut(s)	848
Psp6I	CCWGG	5 cut(s)	92, 452, 757, 796, 967
PspFI	CCCAGC	5 cut(s)	341, 366, 1113, 1583, 1667
PspGI	CCWGG	5 cut(s)	92, 452, 757, 796, 967
PspN4I	GGNNCC	8 cut(s)	37, 98, 140, 451, 743, 960, 1318, 1464
PspPI	GGNCC	1 cut(s)	1268
PstNI	CAGNNNCTG	2 cut(s)	202, 373
PsuI	RGATCY	7 cut(s)	4, 741, 825, 941, 964, 1038, 1671
PvuII	CAGCTG	2 cut(s)	1307, 1483
RruI	TCGCGA	1 cut(s)	1065
RsaI	GTAC	6 cut(s)	71, 98, 134, 310, 1135, 1285
RsaNI	GTAC	6 cut(s)	70, 97, 133, 309, 1134, 1284
RseI	CAYNNNNRTG	1 cut(s)	1322
SacI	GAGCTC	1 cut(s)	848
SaqAI	TTAA	3 cut(s)	1200, 1374, 1449
SatI	GCNGC	7 cut(s)	333, 336, 339, 696, 954, 1305, 1308
Sau96I	GGNCC	1 cut(s)	1268
SchI	GAGTC	2 cut(s)	540, 1199
ScrFI	CCNGG	7 cut(s)	94, 454, 589, 590, 759, 798, 969
SduI	GDGCHC	5 cut(s)	59, 452, 584, 848, 1548
SexAI	ACCWGGT	1 cut(s)	92
SfaNI	GCATC	4 cut(s)	384, 392, 451, 1057
SinI	GGWCC	1 cut(s)	1268
SmaI	CCCGGG	1 cut(s)	590
SmiMI	CAYNNNNRTG	1 cut(s)	1322
SnaBI	TACGTA	1 cut(s)	1133
SphI	GCATGC	1 cut(s)	821
Sse9I	AATT	6 cut(s)	510, 569, 876, 986, 1554, 1569
SsiI	CCGC	4 cut(s)	291, 733, 849, 956
SspI	AATATT	1 cut(s)	1296
SspMI	CTAG	5 cut(s)	8, 623, 1044, 1190, 1735
SstI	GAGCTC	1 cut(s)	848
StyD4I	CCNGG	7 cut(s)	92, 452, 587, 588, 757, 796, 967
StyI	CCWWGG	5 cut(s)	576, 622, 723, 737, 1548
TaaI	ACNGT	9 cut(s)	51, 192, 523, 652, 838, 982, 1420, 1726, 1732
TaiI	ACGT	5 cut(s)	111, 153, 1135, 1173, 1416
TasI	AATT	6 cut(s)	510, 569, 876, 986, 1554, 1569
TatI	WGTACW	1 cut(s)	132
TfiI	GAWTC	4 cut(s)	11, 480, 754, 995
Tru1I	TTAA	3 cut(s)	1200, 1374, 1449
Tru9I	TTAA	3 cut(s)	1200, 1374, 1449
TscAI	CASTG	7 cut(s)	54, 195, 358, 528, 775, 1147, 1423
TseFI	GTSAC	4 cut(s)	45, 1324, 1414, 1726
TseI	GCWGC	7 cut(s)	332, 335, 338, 695, 953, 1304, 1307
Tsp45I	GTSAC	4 cut(s)	45, 1324, 1414, 1726
TspDTI	ATGAA	4 cut(s)	217, 1122, 1251, 1648
TspMI	CCCGGG	1 cut(s)	588
TspRI	CASTG	7 cut(s)	54, 195, 358, 528, 775, 1147, 1423
Van91I	CCANNNNNTGG	2 cut(s)	373, 1223
VpaK11BI	GGWCC	1 cut(s)	1268
VspI	ATTAAT	1 cut(s)	1374
XagI	CCTNNNNNAGG	1 cut(s)	443
XapI	RAATTY	3 cut(s)	876, 986, 1554
XbaI	TCTAGA	2 cut(s)	7, 1189
XceI	RCATGY	1 cut(s)	821
XcmI	CCANNNNNNNNNTGG	1 cut(s)	370
XmaI	CCCGGG	1 cut(s)	588
XmaJI	CCTAGG	1 cut(s)	622
XmiI	GTMKAC	1 cut(s)	518
XmnI	GAANNNNTTC	1 cut(s)	792
XspI	CTAG	5 cut(s)	8, 623, 1044, 1190, 1735
ZraI	GACGTC	1 cut(s)	109
Zsp2I	ATGCAT	1 cut(s)	466

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.