Rh3BG292000

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0009279
Physical Location & Seq
Forward (+)
29256896 .. 29262645
5750 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG292000.1

Sequence Viewer

Length: 2646 bp
ATGGCTTGGGATCTCTGGGGTCCGTCACCTCCTCAAGTTGAACTTGGGACTACTTACTTCCCGGAATCTGAATGGCAGTGTGACTTTTACTTTGGTTATGGACATGATGTTATAGAAGAAAATGCGCTAAACGAGAAACTTTGTTTAGAAGTAGTGAGGAGATGGATAGCAAAGACCGATACTGAAATTGATGAACTCGAAAAGGATTTGGTGTCTCTTCAAAGCGAACTAGCGTGGGCTAAACATGAAGAATGGCCTGACACATGTTGTGGTGCTTTGAGAGAAAAGATTGCTTTCCTTGACAGTTCTCTTAAGAACTTGAGAAATAAAGATGAGAATAATATTGAGGTTCAGTCACTGATGCATTCAGAACCTGCAGAGAGTATAGACGAGATAATGAAGGATCTTCTTCGAAAATACGTCCTGGAGAAAGATGAGCAGCCTGCAAAGACTGAGATCATAGATTCCAGCTCAGAATCTTGGAGACTTGCTGCTGGCTACTCTGACAACAAGAAAACGTCAAGTGAGAGTAATTCAGAAAGCAGTAGGCAATCGGAGGCCAAAGGACAAGGTCCTGAAGAAAAGGAAACATCAAGAATGACTTCTAACAATGAACAGCCTGCAAATACTATTACTATGAATTCAAGCTCTGATTCTTTGGGACTTGCAGCTGGATTCACTGAAAAGAAGTTTACGTCAAGTAATAGTAGTACAGAAAGCAGTAGGCAGTGTGAGGCAAAAGGTCAAGGTGTAGCTCCTGAAGAAAAGGAATCATCATGTATGATCAACAACAAACAGCCTGCACAAAATAGTATCATGGGCTCCAGCCCTGATTCTTTGAAACTTACAGCTGGCTACATTGACAAGAAAACAACAAGCAGTTGTGATTCAGAAAGCACCAGGCCATGGGAGGCCAAAGGACTAGGTTTTCTTACTGAAGAAAAGGAAATGATTCCAACTGCATCTTCGCACTATGAAGGAAATCGTATGCAAAATTCAGAAGTTAAGTGTATGAGTACAAAATATTCAACTAGTGTCAGCTCCATTGATGAGAAGACAAGCCAACAAAGTTTTGATTCTAAATTGATTGATGAGGTGGTAGAGCACTCTTTGATACCTACAGCAGATAATATAGGTACTTCACAGAGGCCTGATGGACATGAATCAGATGTCAGTAAAACGGTTGAGCCCCCAGATGTTATTGCCAGCGATTCTCTTATATATGGAAATGTCTGTTCCAGTGAGGTGAAAAATTCATGCATGCCTATTTCGACAGAAAATGGATGTGATGAAATAAGGAAACAGCTTTCTACTGCTACAGCTAGAAGTCAAACCTTGATGTCATCTTTAACTCCTGAAATCAAGGCAACCCTTCAAAATACCAAAAAGCCTGCATGTTCCCTTGTTAAGTATGGTGGTGAAGATACTTTGAGAGAATCAGCTGGCATCAAGAAGAGTAATGAATGTTTGGAATCCAGATTGTGTGCTTTAAGCCCGACAAAAGGTGATGTAGAGCAAAAGCTAATTGACTTTGTTCCGCAAACTGCACTAAAAGTGGGCATTAAAGAATCAAAGATGACTCTGGGTAACAAGATTGGCTGTCCAAAGAAGTCTTTAAAGACTGCTGGGAATGGAAGAAATCATCGACAAACAGTCAAGTTTCAAGGCCGGATCACTGATGAGGAAGATTCTGATCAGTTTGGAACAGCAAAAGAAACTCAAAAGGATGAGAATGCTGATCTTGATGGTAAGCCCCTCTTGCCCTTGGGTTTGAAACCACAAAGGCCAAAGCGAAAGAGGAAGTTACCGTTGACTGTGCAGAATGTCCAAGAAACATGTTTTCCTTCTACAGAAACGAGTTCAAATACGACGTTTATTTCAAAAGCTCAAAAGGAACAAAAATCCAAAGTAATTGATGACTATACTAGGTTAAATCAGTTTTTTGGTTCGAAGCAGTGTGAAAAATCAGAACATCTTGAACAATATGAAGACAAAGAACATGCCACCTCTGTTGGTAACAGTAAAACTTCAGCTTCACAGTTGCAAAAGAAGAGGAAAAGGACTCCAAGTTTCCAATTTACTGCAGACACTGCAGAATGCACTGGATATCTAGGCTCGAAAGATTTACTCAGGGATGTGCAAAAGAAGAGGAAAGTGACGTCAACTTTGACACGTCCTGCAGAGGTTAAAGGTTTGTCCTTTTTGGGATTGCAAGATTCACACACAGACGCAACTAATGATTCTATTGAGGAAGATCTCAAGCATCCGGAAAAGGAAGATCCAAAAATTGTAGAGGCTTCAAAGTCACAAAAGCAGAGGAAAATGACTTCAAATTTCCCACTTCCTGCAGAAAGTAAAGATTTGCCTTTAGGTTTGGGCTTGCAAGATTTACACAAGGACAGGGACACAACTAATGGTTGGACTGAGGAAGATCCTCTGATCATAAAGTCCTATTCTGGAGATGATTCTCAAGCTAGAAATTTGGTTCCGTATGCAATTCCAACTCCTATTCCAAGTCTGAGGTTGAAGGAAATGACAGTAGGTCAACTGAAGGAATTGGCAAAGAGGCTCAAAGTGAAAGGCTTTTCCAAGCTTAAGAAAATGGAGCTGGTTGAGCTACTAGCCAGGAAACAGAGAGGTCACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Rho_N

Protein Analysis

881

Amino Acids

98.02

Weight (kDa)

5.71

Isoelectric Point (pI)

57.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rho_N PF07498 842 - 874 6.2e-06 Rho termination factor, N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2162
Acc36I ACCTGC 1 cut(s) 382
AccB7I CCANNNNNTGG 1 cut(s) 906
AccIII TCCGGA 1 cut(s) 2266
AciI CCGC 1 cut(s) 1538
AclWI GGATC 5 cut(s) 18, 411, 1679, 2273, 2426
AcsI RAATTY 5 cut(s) 640, 994, 1252, 2332, 2479
AcuI CTGAAG 5 cut(s) 597, 780, 957, 2013, 2570
AcyI GRCGYC 1 cut(s) 2159
AfaI GTAC 3 cut(s) 712, 1018, 1138
AfiI CCNNNNNNNGG 2 cut(s) 906, 1502
AflII CTTAAG 2 cut(s) 311, 2594
AflIII ACRYGT 3 cut(s) 263, 1835, 2171
AhdI GACNNNNNGTC 2 cut(s) 1652, 2541
AhlI ACTAGT 1 cut(s) 1031
AjiI CACGTC 1 cut(s) 2174
AjnI CCWGG 3 cut(s) 423, 899, 2624
AjuI GAANNNNNNNTTGG 2 cut(s) 949, 981
Alw21I GWGCWC 1 cut(s) 1107
Alw26I GTCTC 2 cut(s) 219, 478
AlwI GGATC 5 cut(s) 18, 411, 1679, 2273, 2426
AlwNI CAGNNNCTG 3 cut(s) 358, 374, 2090
Aor13HI TCCGGA 1 cut(s) 2266
AoxI GGCC 7 cut(s) 254, 558, 902, 912, 1148, 1666, 1784
ApeKI GCWGC 3 cut(s) 439, 491, 668
ApoI RAATTY 5 cut(s) 640, 994, 1252, 2332, 2479
ArsI GACNNNNNNTTYG 4 cut(s) 74, 106, 2149, 2181
Asp700I GAANNNNTTC 2 cut(s) 601, 951
AspLEI GCGC 1 cut(s) 127
AspS9I GGNCC 2 cut(s) 20, 572
AsuC2I CCSGG 1 cut(s) 62
AsuHPI GGTGA 4 cut(s) 18, 1258, 1430, 1517
AsuII TTCGAA 2 cut(s) 412, 1949
AvaII GGWCC 2 cut(s) 20, 572
BanII GRGCYC 2 cut(s) 824, 1191
BbsI GAAGAC 2 cut(s) 1061, 1995
Bbv12I GWGCWC 1 cut(s) 1107
BbvI GCAGC 3 cut(s) 451, 478, 680
BccI CCATC 3 cut(s) 156, 1148, 1739
BciT130I CCWGG 3 cut(s) 425, 901, 2626
BclI TGATCA 3 cut(s) 783, 1693, 2439
BcnI CCSGG 1 cut(s) 62
BcoDI GTCTC 2 cut(s) 219, 478
BcuI ACTAGT 1 cut(s) 1031
BfaI CTAG 9 cut(s) 230, 923, 1032, 1323, 1926, 2111, 2475, 2621, 2644
BfmI CTRYAG 8 cut(s) 375, 1119, 1317, 1848, 2082, 2091, 2178, 2346
BfrI CTTAAG 2 cut(s) 311, 2594
BfuAI ACCTGC 1 cut(s) 382
BglII AGATCT 1 cut(s) 2254
BisI GCNGC 3 cut(s) 440, 492, 669
BlsI GCNGC 3 cut(s) 441, 493, 670
Bme1390I CCNGG 4 cut(s) 62, 425, 901, 2626
Bme18I GGWCC 2 cut(s) 20, 572
BmeRI GACNNNNNGTC 2 cut(s) 1652, 2541
BmgBI CACGTC 1 cut(s) 2174
BmgT120I GGNCC 2 cut(s) 20, 572
BmiI GGNNCC 3 cut(s) 21, 823, 2487
BmrFI CCNGG 4 cut(s) 62, 425, 901, 2626
BmsI GCATC 4 cut(s) 351, 971, 1455, 2272
BpiI GAAGAC 2 cut(s) 1061, 1995
BpmI CTGGAG 3 cut(s) 446, 808, 2478
Bpu14I TTCGAA 2 cut(s) 412, 1949
BpuEI CTTGAG 4 cut(s) 18, 340, 2243, 2454
BpuMI CCSGG 1 cut(s) 62
BsaBI GATNNNNATC 1 cut(s) 1692
BsaHI GRCGYC 1 cut(s) 2159
BsaJI CCNNGG 2 cut(s) 905, 1764
BsaWI WCCGGW 1 cut(s) 2266
Bsc4I CCNNNNNNNGG 2 cut(s) 906, 1502
Bse1I ACTGG 2 cut(s) 1239, 2107
Bse8I GATNNNNATC 1 cut(s) 1692
BseAI TCCGGA 1 cut(s) 2266
BseBI CCWGG 3 cut(s) 425, 901, 2626
BseDI CCNNGG 2 cut(s) 905, 1764
BseGI GGATG 4 cut(s) 1289, 1732, 2140, 2263
BseJI GATNNNNATC 1 cut(s) 1692
BseLI CCNNNNNNNGG 2 cut(s) 906, 1502
BseMII CTCAG 5 cut(s) 444, 486, 2143, 2415, 2510
BseNI ACTGG 2 cut(s) 1239, 2107
BseRI GAGGAG 2 cut(s) 21, 172
BseXI GCAGC 3 cut(s) 451, 478, 680
BseYI CCCAGC 1 cut(s) 1625
BsgI GTGCAG 3 cut(s) 786, 1530, 1838
BshFI GGCC 7 cut(s) 256, 560, 904, 914, 1150, 1668, 1786
BsiHKAI GWGCWC 1 cut(s) 1107
BsiSI CCGG 3 cut(s) 62, 1669, 2267
BslFI GGGAC 3 cut(s) 61, 675, 2417
BslI CCNNNNNNNGG 2 cut(s) 906, 1502
BsmAI GTCTC 2 cut(s) 219, 478
BsmFI GGGAC 3 cut(s) 61, 675, 2417
BsmI GAATGC 3 cut(s) 364, 1738, 2102
BsnI GGCC 7 cut(s) 256, 560, 904, 914, 1150, 1668, 1786
Bsp119I TTCGAA 2 cut(s) 412, 1949
Bsp1286I GDGCHC 3 cut(s) 824, 1107, 1191
Bsp13I TCCGGA 1 cut(s) 2266
Bsp19I CCATGG 1 cut(s) 905
BspACI CCGC 1 cut(s) 1538
BspANI GGCC 7 cut(s) 256, 560, 904, 914, 1150, 1668, 1786
BspCNI CTCAG 5 cut(s) 445, 485, 2142, 2416, 2511
BspEI TCCGGA 1 cut(s) 2266
BspLI GGNNCC 3 cut(s) 21, 823, 2487
BspMAI CTGCAG 5 cut(s) 379, 2086, 2095, 2182, 2350
BspMI ACCTGC 1 cut(s) 382
BspPI GGATC 5 cut(s) 18, 411, 1679, 2273, 2426
BspT104I TTCGAA 2 cut(s) 412, 1949
BspTI CTTAAG 2 cut(s) 311, 2594
BsrI ACTGG 2 cut(s) 1239, 2107
BssECI CCNNGG 2 cut(s) 905, 1764
BssNI GRCGYC 1 cut(s) 2159
BssT1I CCWWGG 2 cut(s) 905, 1764
Bst2UI CCWGG 3 cut(s) 425, 901, 2626
Bst4CI ACNGT 8 cut(s) 305, 1183, 1654, 1809, 1816, 2021, 2040, 2539
Bst6I CTCTTC 4 cut(s) 222, 1448, 2045, 2141
BstACI GRCGYC 1 cut(s) 2159
BstAFI CTTAAG 2 cut(s) 311, 2594
BstAPI GCANNNNNTGC 1 cut(s) 2090
BstBI TTCGAA 2 cut(s) 412, 1949
BstDEI CTNAG 5 cut(s) 453, 472, 2129, 2424, 2519
BstDSI CCRYGG 1 cut(s) 905
BstF5I GGATG 4 cut(s) 1289, 1732, 2140, 2263
BstHHI GCGC 1 cut(s) 127
BstMAI GTCTC 2 cut(s) 219, 478
BstMWI GCNNNNNNNGC 3 cut(s) 1759, 2090, 2614
BstNI CCWGG 3 cut(s) 425, 901, 2626
BstNSI RCATGY 5 cut(s) 267, 1264, 1398, 1839, 2003
BstSCI CCNGG 4 cut(s) 60, 423, 899, 2624
BstSFI CTRYAG 8 cut(s) 375, 1119, 1317, 1848, 2082, 2091, 2178, 2346
BstV1I GCAGC 3 cut(s) 451, 478, 680
BstV2I GAAGAC 2 cut(s) 1061, 1995
BstX2I RGATCY 5 cut(s) 10, 403, 2254, 2278, 2431
BstYI RGATCY 5 cut(s) 10, 403, 2254, 2278, 2431
BsuRI GGCC 7 cut(s) 256, 560, 904, 914, 1150, 1668, 1786
BtgI CCRYGG 1 cut(s) 905
BtrI CACGTC 1 cut(s) 2174
BtsCI GGATG 4 cut(s) 1289, 1732, 2140, 2263
BtsI GCAGTG 4 cut(s) 83, 734, 1961, 2088
BtsIMutI CAGTG 9 cut(s) 83, 356, 678, 734, 1246, 1674, 1961, 2088, 2100
BveI ACCTGC 1 cut(s) 382
CaiI CAGNNNCTG 3 cut(s) 358, 374, 2090
CfoI GCGC 1 cut(s) 127
Cfr13I GGNCC 2 cut(s) 20, 572
CseI GACGC 1 cut(s) 2237
Csp6I GTAC 3 cut(s) 711, 1017, 1137
CspCI CAANNNNNGTGG 2 cut(s) 1993, 2028
CviQI GTAC 3 cut(s) 711, 1017, 1137
DdeI CTNAG 5 cut(s) 453, 472, 2129, 2424, 2519
DraI TTTAAA 1 cut(s) 1617
DriI GACNNNNNGTC 2 cut(s) 1652, 2541
Eam1104I CTCTTC 4 cut(s) 222, 1448, 2045, 2141
Eam1105I GACNNNNNGTC 2 cut(s) 1652, 2541
EarI CTCTTC 4 cut(s) 222, 1448, 2045, 2141
Eco130I CCWWGG 2 cut(s) 905, 1764
Eco147I AGGCCT 1 cut(s) 1150
Eco24I GRGCYC 2 cut(s) 824, 1191
Eco32I GATATC 1 cut(s) 2108
Eco47I GGWCC 2 cut(s) 20, 572
Eco57I CTGAAG 5 cut(s) 597, 780, 957, 2013, 2570
EcoO109I RGGNCCY 1 cut(s) 572
EcoRI GAATTC 1 cut(s) 640
EcoRII CCWGG 3 cut(s) 423, 899, 2624
EcoRV GATATC 1 cut(s) 2108
EcoT14I CCWWGG 2 cut(s) 905, 1764
EcoT22I ATGCAT 2 cut(s) 366, 1262
EcoT38I GRGCYC 2 cut(s) 824, 1191
ErhI CCWWGG 2 cut(s) 905, 1764
FalI AAGNNNNNCTT 6 cut(s) 27, 59, 586, 618, 1742, 1774
FaqI GGGAC 3 cut(s) 61, 675, 2417
FbaI TGATCA 3 cut(s) 783, 1693, 2439
Fnu4HI GCNGC 3 cut(s) 440, 492, 669
FokI GGATG 4 cut(s) 1296, 1739, 2147, 2250
FriOI GRGCYC 2 cut(s) 824, 1191
Fsp4HI GCNGC 3 cut(s) 440, 492, 669
FspBI CTAG 9 cut(s) 230, 923, 1032, 1323, 1926, 2111, 2475, 2621, 2644
GlaI GCGC 1 cut(s) 126
GluI GCNGC 3 cut(s) 440, 492, 669
GsaI CCCAGC 1 cut(s) 1629
GsuI CTGGAG 3 cut(s) 446, 808, 2478
HaeIII GGCC 7 cut(s) 256, 560, 904, 914, 1150, 1668, 1786
HapII CCGG 3 cut(s) 62, 1669, 2267
HgaI GACGC 1 cut(s) 2237
HhaI GCGC 1 cut(s) 127
Hin1I GRCGYC 1 cut(s) 2159
Hin6I GCGC 1 cut(s) 125
HinP1I GCGC 1 cut(s) 125
HincII GTYRAC 3 cut(s) 1812, 2163, 2546
HindII GTYRAC 3 cut(s) 1812, 2163, 2546
HindIII AAGCTT 1 cut(s) 2591
HpaII CCGG 3 cut(s) 62, 1669, 2267
HphI GGTGA 4 cut(s) 18, 1258, 1430, 1517
Hpy166II GTNNAC 4 cut(s) 693, 1812, 2163, 2546
Hpy8I GTNNAC 4 cut(s) 693, 1812, 2163, 2546
Hpy99I CGWCG 1 cut(s) 1873
HpyAV CCTTC 6 cut(s) 394, 971, 1382, 1854, 2521, 2545
HpyCH4III ACNGT 8 cut(s) 305, 1183, 1654, 1809, 1816, 2021, 2040, 2539
HpyCH4IV ACGT 6 cut(s) 420, 518, 695, 1871, 2159, 2173
HpyF10VI GCNNNNNNNGC 3 cut(s) 1759, 2090, 2614
HpyF3I CTNAG 5 cut(s) 453, 472, 2129, 2424, 2519
HpySE526I ACGT 6 cut(s) 420, 518, 695, 1871, 2159, 2173
Hsp92I GRCGYC 1 cut(s) 2159
HspAI GCGC 1 cut(s) 125
Kpn2I TCCGGA 1 cut(s) 2266
Ksp22I TGATCA 3 cut(s) 783, 1693, 2439
LmnI GCTCC 4 cut(s) 760, 827, 1046, 2605
Lsp1109I GCAGC 3 cut(s) 451, 478, 680
LweI GCATC 4 cut(s) 351, 971, 1455, 2272
MaeI CTAG 9 cut(s) 230, 923, 1032, 1323, 1926, 2111, 2475, 2621, 2644
MaeII ACGT 6 cut(s) 420, 518, 695, 1871, 2159, 2173
MaeIII GTNAC 9 cut(s) 24, 80, 354, 1586, 1803, 2015, 2155, 2304, 2639
MflI RGATCY 5 cut(s) 10, 403, 2254, 2278, 2431
MhlI GDGCHC 3 cut(s) 824, 1107, 1191
MlyI GAGTC 2 cut(s) 1573, 2056
MmeI TCCRAC 3 cut(s) 980, 2399, 2525
Mph1103I ATGCAT 2 cut(s) 366, 1262
MroI TCCGGA 1 cut(s) 2266
MroXI GAANNNNTTC 2 cut(s) 601, 951
MspA1I CMGCKG 3 cut(s) 671, 851, 1442
MspCI CTTAAG 2 cut(s) 311, 2594
MspI CCGG 3 cut(s) 62, 1669, 2267
MspR9I CCNGG 4 cut(s) 62, 425, 901, 2626
Mva1269I GAATGC 3 cut(s) 364, 1738, 2102
MvaI CCWGG 3 cut(s) 425, 901, 2626
MwoI GCNNNNNNNGC 3 cut(s) 1759, 2090, 2614
NciI CCSGG 1 cut(s) 62
NcoI CCATGG 1 cut(s) 905
NlaIV GGNNCC 3 cut(s) 21, 823, 2487
NmuCI GTSAC 6 cut(s) 24, 80, 354, 2155, 2304, 2639
NsiI ATGCAT 2 cut(s) 366, 1262
NspI RCATGY 5 cut(s) 267, 1264, 1398, 1839, 2003
NspV TTCGAA 2 cut(s) 412, 1949
PaeI GCATGC 1 cut(s) 1264
PceI AGGCCT 1 cut(s) 1150
PciI ACATGT 2 cut(s) 263, 1835
PctI GAATGC 3 cut(s) 364, 1738, 2102
PdmI GAANNNNTTC 2 cut(s) 601, 951
PflFI GACNNNGTC 1 cut(s) 570
PflMI CCANNNNNTGG 1 cut(s) 906
PfoI TCCNGGA 2 cut(s) 60, 423
PkrI GCNGC 3 cut(s) 441, 493, 670
PleI GAGTC 2 cut(s) 1573, 2056
PpsI GAGTC 2 cut(s) 1573, 2056
PpuMI RGGWCCY 1 cut(s) 572
PscI ACATGT 2 cut(s) 263, 1835
Psp5II RGGWCCY 1 cut(s) 572
Psp6I CCWGG 3 cut(s) 423, 899, 2624
PspFI CCCAGC 1 cut(s) 1625
PspGI CCWGG 3 cut(s) 423, 899, 2624
PspN4I GGNNCC 3 cut(s) 21, 823, 2487
PspPI GGNCC 2 cut(s) 20, 572
PspPPI RGGWCCY 1 cut(s) 572
PstI CTGCAG 5 cut(s) 379, 2086, 2095, 2182, 2350
PstNI CAGNNNCTG 3 cut(s) 358, 374, 2090
PsuI RGATCY 5 cut(s) 10, 403, 2254, 2278, 2431
PsyI GACNNNGTC 1 cut(s) 570
PvuII CAGCTG 3 cut(s) 671, 851, 1442
RsaI GTAC 3 cut(s) 712, 1018, 1138
RsaNI GTAC 3 cut(s) 711, 1017, 1137
SatI GCNGC 3 cut(s) 440, 492, 669
Sau96I GGNCC 2 cut(s) 20, 572
SchI GAGTC 2 cut(s) 1573, 2056
ScrFI CCNGG 4 cut(s) 62, 425, 901, 2626
SduI GDGCHC 3 cut(s) 824, 1107, 1191
SfaNI GCATC 4 cut(s) 351, 971, 1455, 2272
SfcI CTRYAG 8 cut(s) 375, 1119, 1317, 1848, 2082, 2091, 2178, 2346
SfuI TTCGAA 2 cut(s) 412, 1949
SinI GGWCC 2 cut(s) 20, 572
SmlI CTYRAG 6 cut(s) 33, 311, 319, 2258, 2469, 2594
SmoI CTYRAG 6 cut(s) 33, 311, 319, 2258, 2469, 2594
SpeI ACTAGT 1 cut(s) 1031
SphI GCATGC 1 cut(s) 1264
SseBI AGGCCT 1 cut(s) 1150
SsiI CCGC 1 cut(s) 1538
SspI AATATT 2 cut(s) 343, 1025
SspMI CTAG 9 cut(s) 230, 923, 1032, 1323, 1926, 2111, 2475, 2621, 2644
StuI AGGCCT 1 cut(s) 1150
StyD4I CCNGG 4 cut(s) 60, 423, 899, 2624
StyI CCWWGG 2 cut(s) 905, 1764
TaaI ACNGT 8 cut(s) 305, 1183, 1654, 1809, 1816, 2021, 2040, 2539
TaiI ACGT 6 cut(s) 423, 521, 698, 1874, 2162, 2176
TaqI TCGA 6 cut(s) 198, 412, 1271, 1645, 1949, 2117
TaqII GACCGA 1 cut(s) 191
TatI WGTACW 2 cut(s) 710, 1016
TscAI CASTG 9 cut(s) 83, 363, 685, 734, 1246, 1681, 1961, 2095, 2107
TseFI GTSAC 6 cut(s) 24, 80, 354, 2155, 2304, 2639
TseI GCWGC 3 cut(s) 439, 491, 668
Tsp45I GTSAC 6 cut(s) 24, 80, 354, 2155, 2304, 2639
TspGWI ACGGA 2 cut(s) 12, 2478
TspRI CASTG 9 cut(s) 83, 363, 685, 734, 1246, 1681, 1961, 2095, 2107
Tth111I GACNNNGTC 1 cut(s) 570
Van91I CCANNNNNTGG 1 cut(s) 906
Vha464I CTTAAG 2 cut(s) 311, 2594
VpaK11BI GGWCC 2 cut(s) 20, 572
XapI RAATTY 5 cut(s) 640, 994, 1252, 2332, 2479
XceI RCATGY 5 cut(s) 267, 1264, 1398, 1839, 2003
XmnI GAANNNNTTC 2 cut(s) 601, 951
XspI CTAG 9 cut(s) 230, 923, 1032, 1323, 1926, 2111, 2475, 2621, 2644
ZraI GACGTC 1 cut(s) 2160
Zsp2I ATGCAT 2 cut(s) 366, 1262
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.