Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G36240 |
| fragaria_vesca | FvH4_6g18780 |
| prunus_persica | Prupe.7G109800_v2.0.a1 |
| pyrus_communis | pycom04g01140 pycom15g30020 |
| rosa_chinensis | RchiOBHm_Chr3g0473791 |
| rosa_laevigata | RLG00000015254 RLG00000023984 |
| rosa_multiflora | Rmu_co8122080.1_g000001 Rmu_sc0001293.1_g000012 Rmu_sc0007035.1_g000006 Rmu_sc0007035.1_g000008 |
| rosa_roxburghii | Rroxscaffold_1G00029320 Rroxscaffold_6G00407800 |
| rosa_rugosa | Rorug03G0135500 |
| rosa_samantha | Rh3BG214200 Rh3BG214500 Rh3CG210900 Rh3CG211100 Rh3DG210100 Rh3DG210300 |
| rosa_wichuraiana | Rw3G017010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 182 |
| AcsI | RAATTY | 1 cut(s) | 64 |
| AgsI | TTSAA | 4 cut(s) | 44, 212, 257, 367 |
| AluBI | AGCT | 5 cut(s) | 14, 97, 123, 290, 331 |
| AluI | AGCT | 5 cut(s) | 14, 97, 123, 290, 331 |
| AlwI | GGATC | 1 cut(s) | 182 |
| ApoI | RAATTY | 1 cut(s) | 64 |
| AsuHPI | GGTGA | 1 cut(s) | 400 |
| AxyI | CCTNAGG | 1 cut(s) | 299 |
| BccI | CCATC | 2 cut(s) | 190, 455 |
| BceAI | ACGGC | 1 cut(s) | 352 |
| BfaI | CTAG | 3 cut(s) | 11, 15, 332 |
| BglII | AGATCT | 1 cut(s) | 259 |
| BmiI | GGNNCC | 1 cut(s) | 225 |
| BmsI | GCATC | 2 cut(s) | 195, 399 |
| Bsa29I | ATCGAT | 1 cut(s) | 177 |
| Bse21I | CCTNAGG | 1 cut(s) | 299 |
| BseCI | ATCGAT | 1 cut(s) | 177 |
| BseGI | GGATG | 2 cut(s) | 210, 409 |
| BseMII | CTCAG | 1 cut(s) | 273 |
| BseRI | GAGGAG | 1 cut(s) | 175 |
| BshVI | ATCGAT | 1 cut(s) | 177 |
| Bsp143I | GATC | 3 cut(s) | 174, 259, 433 |
| BspCNI | CTCAG | 1 cut(s) | 274 |
| BspDI | ATCGAT | 1 cut(s) | 177 |
| BspLI | GGNNCC | 1 cut(s) | 225 |
| BspPI | GGATC | 1 cut(s) | 182 |
| BssMI | GATC | 3 cut(s) | 174, 259, 433 |
| Bst6I | CTCTTC | 1 cut(s) | 207 |
| BstDEI | CTNAG | 2 cut(s) | 282, 299 |
| BstF5I | GGATG | 2 cut(s) | 210, 409 |
| BstKTI | GATC | 3 cut(s) | 177, 262, 436 |
| BstMBI | GATC | 3 cut(s) | 174, 259, 433 |
| BstX2I | RGATCY | 1 cut(s) | 259 |
| BstYI | RGATCY | 1 cut(s) | 259 |
| Bsu15I | ATCGAT | 1 cut(s) | 177 |
| Bsu36I | CCTNAGG | 1 cut(s) | 299 |
| BsuTUI | ATCGAT | 1 cut(s) | 177 |
| BtsCI | GGATG | 2 cut(s) | 210, 409 |
| ClaI | ATCGAT | 1 cut(s) | 177 |
| CviAII | CATG | 1 cut(s) | 340 |
| CviJI | RGCY | 7 cut(s) | 14, 97, 123, 290, 324, 331, 344 |
| CviKI_1 | RGCY | 7 cut(s) | 14, 97, 123, 290, 324, 331, 344 |
| DdeI | CTNAG | 2 cut(s) | 282, 299 |
| DpnI | GATC | 3 cut(s) | 176, 261, 435 |
| DpnII | GATC | 3 cut(s) | 174, 259, 433 |
| Eam1104I | CTCTTC | 1 cut(s) | 207 |
| EarI | CTCTTC | 1 cut(s) | 207 |
| Eco81I | CCTNAGG | 1 cut(s) | 299 |
| FaeI | CATG | 1 cut(s) | 343 |
| FaiI | YATR | 6 cut(s) | 24, 33, 341, 428, 445, 447 |
| FatI | CATG | 1 cut(s) | 339 |
| FokI | GGATG | 2 cut(s) | 217, 416 |
| FspBI | CTAG | 3 cut(s) | 11, 15, 332 |
| Hin1II | CATG | 1 cut(s) | 343 |
| HinfI | GANTC | 1 cut(s) | 383 |
| HphI | GGTGA | 1 cut(s) | 400 |
| Hpy166II | GTNNAC | 1 cut(s) | 91 |
| Hpy188I | TCNGA | 1 cut(s) | 120 |
| Hpy188III | TCNNGA | 3 cut(s) | 227, 257, 367 |
| Hpy8I | GTNNAC | 1 cut(s) | 91 |
| HpyAV | CCTTC | 2 cut(s) | 263, 366 |
| HpyCH4V | TGCA | 1 cut(s) | 267 |
| HpyF3I | CTNAG | 2 cut(s) | 282, 299 |
| Hsp92II | CATG | 1 cut(s) | 343 |
| Kzo9I | GATC | 3 cut(s) | 174, 259, 433 |
| LmnI | GCTCC | 1 cut(s) | 328 |
| LpnPI | CCDG | 2 cut(s) | 240, 444 |
| LweI | GCATC | 2 cut(s) | 195, 399 |
| MaeI | CTAG | 3 cut(s) | 11, 15, 332 |
| MaeIII | GTNAC | 1 cut(s) | 137 |
| MalI | GATC | 3 cut(s) | 176, 261, 435 |
| MboI | GATC | 3 cut(s) | 174, 259, 433 |
| MboII | GAAGA | 1 cut(s) | 224 |
| MflI | RGATCY | 1 cut(s) | 259 |
| MluCI | AATT | 3 cut(s) | 64, 244, 268 |
| MmeI | TCCRAC | 1 cut(s) | 60 |
| MnlI | CCTC | 9 cut(s) | 76, 96, 145, 153, 156, 165, 208, 260, 277 |
| MseI | TTAA | 1 cut(s) | 243 |
| NdeII | GATC | 3 cut(s) | 174, 259, 433 |
| NlaIII | CATG | 1 cut(s) | 343 |
| NlaIV | GGNNCC | 1 cut(s) | 225 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 74 |
| PfeI | GAWTC | 1 cut(s) | 383 |
| PspN4I | GGNNCC | 1 cut(s) | 225 |
| PsuI | RGATCY | 1 cut(s) | 259 |
| SaqAI | TTAA | 1 cut(s) | 243 |
| Sau3AI | GATC | 3 cut(s) | 174, 259, 433 |
| SfaNI | GCATC | 2 cut(s) | 195, 399 |
| Sse9I | AATT | 3 cut(s) | 64, 244, 268 |
| SspMI | CTAG | 3 cut(s) | 11, 15, 332 |
| TaqI | TCGA | 1 cut(s) | 177 |
| TasI | AATT | 3 cut(s) | 64, 244, 268 |
| TfiI | GAWTC | 1 cut(s) | 383 |
| Tru1I | TTAA | 1 cut(s) | 243 |
| Tru9I | TTAA | 1 cut(s) | 243 |
| TspDTI | ATGAA | 1 cut(s) | 195 |
| XapI | RAATTY | 1 cut(s) | 64 |
| XspI | CTAG | 3 cut(s) | 11, 15, 332 |