Transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G23210 AT3G23210 AT4G14410 AT4G14410 AT4G14410 |
| fragaria_vesca | FvH4_4g03420 |
| malus_domestica | MD13G1212400.v1.1 MD16G1216000.v1.1 |
| prunus_persica | Prupe.1G037400_v2.0.a1 |
| pyrus_communis | pycom13g18420 pycom16g18070 |
| rosa_chinensis | RchiOBHm_Chr4g0392401 |
| rosa_laevigata | RLG00000009814 |
| rosa_multiflora | Rmu_sc0001800.1_g000017 |
| rosa_roxburghii | Rroxscaffold_5G00337580 |
| rosa_rugosa | Rorug03G0338600 |
| rosa_samantha | Rh4AG042400 Rh4BG037300 Rh4CG045200 Rh4DG039700 |
| rosa_wichuraiana | Rw4G003310 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 36 |
| AccB1I | GGYRCC | 1 cut(s) | 36 |
| AcsI | RAATTY | 1 cut(s) | 113 |
| AcuI | CTGAAG | 1 cut(s) | 381 |
| AfaI | GTAC | 1 cut(s) | 38 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 195 |
| AgsI | TTSAA | 3 cut(s) | 250, 401, 446 |
| AjnI | CCWGG | 2 cut(s) | 153, 286 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 15, 47, 178, 210 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 48, 80 |
| AluBI | AGCT | 6 cut(s) | 45, 218, 359, 365, 373, 495 |
| AluI | AGCT | 6 cut(s) | 45, 218, 359, 365, 373, 495 |
| Alw21I | GWGCWC | 1 cut(s) | 375 |
| AoxI | GGCC | 2 cut(s) | 210, 293 |
| ApeKI | GCWGC | 1 cut(s) | 137 |
| ApoI | RAATTY | 1 cut(s) | 113 |
| Asp718I | GGTACC | 1 cut(s) | 36 |
| AspS9I | GGNCC | 2 cut(s) | 81, 210 |
| AvaII | GGWCC | 1 cut(s) | 81 |
| BaeGI | GKGCMC | 1 cut(s) | 170 |
| BanI | GGYRCC | 1 cut(s) | 36 |
| BanII | GRGCYC | 1 cut(s) | 375 |
| BbsI | GAAGAC | 1 cut(s) | 30 |
| Bbv12I | GWGCWC | 1 cut(s) | 375 |
| BbvI | GCAGC | 1 cut(s) | 124 |
| BceAI | ACGGC | 1 cut(s) | 207 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 101, 135 |
| BciT130I | CCWGG | 2 cut(s) | 155, 288 |
| BisI | GCNGC | 1 cut(s) | 138 |
| BlsI | GCNGC | 1 cut(s) | 139 |
| Bme1390I | CCNGG | 2 cut(s) | 155, 288 |
| Bme18I | GGWCC | 1 cut(s) | 81 |
| BmgT120I | GGNCC | 2 cut(s) | 81, 210 |
| BmiI | GGNNCC | 3 cut(s) | 38, 211, 285 |
| BmrFI | CCNGG | 2 cut(s) | 155, 288 |
| BmsI | GCATC | 1 cut(s) | 319 |
| BpiI | GAAGAC | 1 cut(s) | 30 |
| Bpu10I | CCTNAGC | 2 cut(s) | 205, 366 |
| BsaJI | CCNNGG | 2 cut(s) | 153, 287 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 195 |
| BseBI | CCWGG | 2 cut(s) | 155, 288 |
| BseDI | CCNNGG | 2 cut(s) | 153, 287 |
| BseGI | GGATG | 1 cut(s) | 10 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 195 |
| BseMII | CTCAG | 4 cut(s) | 96, 219, 344, 380 |
| BseRI | GAGGAG | 1 cut(s) | 250 |
| BseSI | GKGCMC | 1 cut(s) | 170 |
| BseXI | GCAGC | 1 cut(s) | 124 |
| BseYI | CCCAGC | 2 cut(s) | 41, 89 |
| BshFI | GGCC | 2 cut(s) | 212, 295 |
| BshNI | GGYRCC | 1 cut(s) | 36 |
| BsiHKAI | GWGCWC | 1 cut(s) | 375 |
| BslFI | GGGAC | 1 cut(s) | 195 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 195 |
| BsmFI | GGGAC | 1 cut(s) | 195 |
| BsnI | GGCC | 2 cut(s) | 212, 295 |
| Bsp1286I | GDGCHC | 2 cut(s) | 170, 375 |
| Bsp143I | GATC | 3 cut(s) | 48, 108, 451 |
| BspANI | GGCC | 2 cut(s) | 212, 295 |
| BspCNI | CTCAG | 4 cut(s) | 97, 218, 345, 379 |
| BspLI | GGNNCC | 3 cut(s) | 38, 211, 285 |
| BspT107I | GGYRCC | 1 cut(s) | 36 |
| BssECI | CCNNGG | 2 cut(s) | 153, 287 |
| BssMI | GATC | 3 cut(s) | 48, 108, 451 |
| Bst2UI | CCWGG | 2 cut(s) | 155, 288 |
| Bst4CI | ACNGT | 1 cut(s) | 165 |
| Bst6I | CTCTTC | 1 cut(s) | 396 |
| BstC8I | GCNNGC | 5 cut(s) | 220, 297, 315, 460, 464 |
| BstDEI | CTNAG | 4 cut(s) | 105, 205, 353, 366 |
| BstF5I | GGATG | 1 cut(s) | 10 |
| BstKTI | GATC | 3 cut(s) | 51, 111, 454 |
| BstMBI | GATC | 3 cut(s) | 48, 108, 451 |
| BstNI | CCWGG | 2 cut(s) | 155, 288 |
| BstSCI | CCNGG | 2 cut(s) | 153, 286 |
| BstSLI | GKGCMC | 1 cut(s) | 170 |
| BstV1I | GCAGC | 1 cut(s) | 124 |
| BstV2I | GAAGAC | 1 cut(s) | 30 |
| BsuRI | GGCC | 2 cut(s) | 212, 295 |
| BtsCI | GGATG | 1 cut(s) | 10 |
| BtsIMutI | CAGTG | 1 cut(s) | 170 |
| Cac8I | GCNNGC | 5 cut(s) | 220, 297, 315, 460, 464 |
| Cfr13I | GGNCC | 2 cut(s) | 81, 210 |
| Csp6I | GTAC | 1 cut(s) | 37 |
| CviQI | GTAC | 1 cut(s) | 37 |
| DdeI | CTNAG | 4 cut(s) | 105, 205, 353, 366 |
| DpnI | GATC | 3 cut(s) | 50, 110, 453 |
| DpnII | GATC | 3 cut(s) | 48, 108, 451 |
| DraI | TTTAAA | 1 cut(s) | 417 |
| Eam1104I | CTCTTC | 1 cut(s) | 396 |
| EarI | CTCTTC | 1 cut(s) | 396 |
| Ecl136II | GAGCTC | 1 cut(s) | 373 |
| Eco24I | GRGCYC | 1 cut(s) | 375 |
| Eco47I | GGWCC | 1 cut(s) | 81 |
| Eco53kI | GAGCTC | 1 cut(s) | 373 |
| Eco57I | CTGAAG | 1 cut(s) | 381 |
| EcoICRI | GAGCTC | 1 cut(s) | 373 |
| EcoRI | GAATTC | 1 cut(s) | 113 |
| EcoRII | CCWGG | 2 cut(s) | 153, 286 |
| EcoT38I | GRGCYC | 1 cut(s) | 375 |
| FaiI | YATR | 5 cut(s) | 20, 320, 429, 468, 482 |
| FaqI | GGGAC | 1 cut(s) | 195 |
| Fnu4HI | GCNGC | 1 cut(s) | 138 |
| FokI | GGATG | 1 cut(s) | 17 |
| FriOI | GRGCYC | 1 cut(s) | 375 |
| Fsp4HI | GCNGC | 1 cut(s) | 138 |
| GluI | GCNGC | 1 cut(s) | 138 |
| GsaI | CCCAGC | 2 cut(s) | 45, 93 |
| HaeIII | GGCC | 2 cut(s) | 212, 295 |
| HindIII | AAGCTT | 1 cut(s) | 216 |
| HinfI | GANTC | 1 cut(s) | 191 |
| Hpy188III | TCNNGA | 3 cut(s) | 104, 343, 368 |
| Hpy99I | CGWCG | 1 cut(s) | 56 |
| HpyAV | CCTTC | 2 cut(s) | 8, 105 |
| HpyCH4III | ACNGT | 1 cut(s) | 165 |
| HpyCH4V | TGCA | 1 cut(s) | 466 |
| HpyF3I | CTNAG | 4 cut(s) | 105, 205, 353, 366 |
| KpnI | GGTACC | 1 cut(s) | 40 |
| Kzo9I | GATC | 3 cut(s) | 48, 108, 451 |
| LmnI | GCTCC | 2 cut(s) | 145, 370 |
| Lsp1109I | GCAGC | 1 cut(s) | 124 |
| LweI | GCATC | 1 cut(s) | 319 |
| MalI | GATC | 3 cut(s) | 50, 110, 453 |
| MboI | GATC | 3 cut(s) | 48, 108, 451 |
| MboII | GAAGA | 2 cut(s) | 35, 413 |
| MhlI | GDGCHC | 2 cut(s) | 170, 375 |
| MluCI | AATT | 5 cut(s) | 62, 70, 113, 230, 447 |
| MlyI | GAGTC | 1 cut(s) | 200 |
| MnlI | CCTC | 6 cut(s) | 154, 171, 180, 228, 231, 285 |
| MseI | TTAA | 1 cut(s) | 416 |
| MspR9I | CCNGG | 2 cut(s) | 155, 288 |
| MvaI | CCWGG | 2 cut(s) | 155, 288 |
| NdeII | GATC | 3 cut(s) | 48, 108, 451 |
| NlaIV | GGNNCC | 3 cut(s) | 38, 211, 285 |
| PkrI | GCNGC | 1 cut(s) | 139 |
| PleI | GAGTC | 1 cut(s) | 199 |
| PpsI | GAGTC | 1 cut(s) | 199 |
| Psp124BI | GAGCTC | 1 cut(s) | 375 |
| Psp6I | CCWGG | 2 cut(s) | 153, 286 |
| PspFI | CCCAGC | 2 cut(s) | 41, 89 |
| PspGI | CCWGG | 2 cut(s) | 153, 286 |
| PspN4I | GGNNCC | 3 cut(s) | 38, 211, 285 |
| PspPI | GGNCC | 2 cut(s) | 81, 210 |
| RsaI | GTAC | 1 cut(s) | 38 |
| RsaNI | GTAC | 1 cut(s) | 37 |
| SacI | GAGCTC | 1 cut(s) | 375 |
| SaqAI | TTAA | 1 cut(s) | 416 |
| SatI | GCNGC | 1 cut(s) | 138 |
| Sau3AI | GATC | 3 cut(s) | 48, 108, 451 |
| Sau96I | GGNCC | 2 cut(s) | 81, 210 |
| SchI | GAGTC | 1 cut(s) | 200 |
| ScrFI | CCNGG | 2 cut(s) | 155, 288 |
| SduI | GDGCHC | 2 cut(s) | 170, 375 |
| SetI | ASST | 8 cut(s) | 47, 220, 289, 361, 367, 375, 423, 497 |
| SfaNI | GCATC | 1 cut(s) | 319 |
| SinI | GGWCC | 1 cut(s) | 81 |
| Sse9I | AATT | 5 cut(s) | 62, 70, 113, 230, 447 |
| SstI | GAGCTC | 1 cut(s) | 375 |
| StyD4I | CCNGG | 2 cut(s) | 153, 286 |
| TaaI | ACNGT | 1 cut(s) | 165 |
| TaqI | TCGA | 2 cut(s) | 51, 111 |
| TasI | AATT | 5 cut(s) | 62, 70, 113, 230, 447 |
| Tru1I | TTAA | 1 cut(s) | 416 |
| Tru9I | TTAA | 1 cut(s) | 416 |
| TscAI | CASTG | 1 cut(s) | 170 |
| TseI | GCWGC | 1 cut(s) | 137 |
| TspDTI | ATGAA | 2 cut(s) | 87, 402 |
| TspRI | CASTG | 1 cut(s) | 170 |
| VpaK11BI | GGWCC | 1 cut(s) | 81 |
| XapI | RAATTY | 1 cut(s) | 113 |