26S proteasome non-atpase regulatory subunit
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0337511 RchiOBHm_Chr2g0159871 RchiOBHm_Chr6g0273251 |
| rosa_roxburghii | Rroxscaffold_5G00339200 |
| rosa_rugosa | Rorug03G0292000 Rorug06G0211400 |
| rosa_samantha | Rh1AG212700 Rh1CG196900 Rh2DG589000 Rh4AG063300 Rh4AG067400 Rh4BG061600 Rh4BG229500 Rh4CG067900 Rh7DG171100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 540 |
| AcoI | YGGCCR | 2 cut(s) | 410, 527 |
| AfaI | GTAC | 4 cut(s) | 324, 334, 449, 461 |
| AgsI | TTSAA | 4 cut(s) | 14, 395, 402, 554 |
| AjnI | CCWGG | 1 cut(s) | 93 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 298, 330 |
| AluBI | AGCT | 2 cut(s) | 238, 398 |
| AluI | AGCT | 2 cut(s) | 238, 398 |
| Alw21I | GWGCWC | 1 cut(s) | 313 |
| Alw26I | GTCTC | 1 cut(s) | 9 |
| AoxI | GGCC | 3 cut(s) | 123, 410, 527 |
| ApeKI | GCWGC | 3 cut(s) | 98, 151, 254 |
| AseI | ATTAAT | 1 cut(s) | 201 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 246 |
| AspS9I | GGNCC | 4 cut(s) | 124, 302, 488, 579 |
| AsuHPI | GGTGA | 3 cut(s) | 95, 221, 430 |
| AvaII | GGWCC | 3 cut(s) | 302, 488, 579 |
| BalI | TGGCCA | 1 cut(s) | 412 |
| Bbv12I | GWGCWC | 1 cut(s) | 313 |
| BbvI | GCAGC | 3 cut(s) | 85, 163, 241 |
| BccI | CCATC | 3 cut(s) | 35, 347, 421 |
| BceAI | ACGGC | 2 cut(s) | 391, 542 |
| BciT130I | CCWGG | 1 cut(s) | 95 |
| BcoDI | GTCTC | 1 cut(s) | 9 |
| BfaI | CTAG | 1 cut(s) | 239 |
| BisI | GCNGC | 3 cut(s) | 99, 152, 255 |
| BlsI | GCNGC | 3 cut(s) | 100, 153, 256 |
| Bme1390I | CCNGG | 1 cut(s) | 95 |
| Bme18I | GGWCC | 3 cut(s) | 302, 488, 579 |
| BmgT120I | GGNCC | 4 cut(s) | 124, 302, 488, 579 |
| BmrFI | CCNGG | 1 cut(s) | 95 |
| BpmI | CTGGAG | 1 cut(s) | 369 |
| BsaJI | CCNNGG | 1 cut(s) | 407 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 555, 585 |
| Bse1I | ACTGG | 1 cut(s) | 352 |
| Bse3DI | GCAATG | 1 cut(s) | 133 |
| BseBI | CCWGG | 1 cut(s) | 95 |
| BseDI | CCNNGG | 1 cut(s) | 407 |
| BseMI | GCAATG | 1 cut(s) | 133 |
| BseNI | ACTGG | 1 cut(s) | 352 |
| BseXI | GCAGC | 3 cut(s) | 85, 163, 241 |
| BshFI | GGCC | 3 cut(s) | 125, 412, 529 |
| BsiHKAI | GWGCWC | 1 cut(s) | 313 |
| BsmAI | GTCTC | 1 cut(s) | 9 |
| BsmI | GAATGC | 1 cut(s) | 105 |
| BsnI | GGCC | 3 cut(s) | 125, 412, 529 |
| Bsp1286I | GDGCHC | 1 cut(s) | 313 |
| BspANI | GGCC | 3 cut(s) | 125, 412, 529 |
| BsrDI | GCAATG | 1 cut(s) | 133 |
| BsrI | ACTGG | 1 cut(s) | 352 |
| BssECI | CCNNGG | 1 cut(s) | 407 |
| Bst2UI | CCWGG | 1 cut(s) | 95 |
| Bst6I | CTCTTC | 1 cut(s) | 562 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 251 |
| BstC8I | GCNNGC | 1 cut(s) | 103 |
| BstDSI | CCRYGG | 1 cut(s) | 407 |
| BstMAI | GTCTC | 1 cut(s) | 9 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 122, 251 |
| BstNI | CCWGG | 1 cut(s) | 95 |
| BstNSI | RCATGY | 1 cut(s) | 427 |
| BstSCI | CCNGG | 1 cut(s) | 93 |
| BstV1I | GCAGC | 3 cut(s) | 85, 163, 241 |
| BsuRI | GGCC | 3 cut(s) | 125, 412, 529 |
| BtgI | CCRYGG | 1 cut(s) | 407 |
| BtsIMutI | CAGTG | 1 cut(s) | 345 |
| Cac8I | GCNNGC | 1 cut(s) | 103 |
| Cfr13I | GGNCC | 4 cut(s) | 124, 302, 488, 579 |
| Csp6I | GTAC | 4 cut(s) | 323, 333, 448, 460 |
| CviAII | CATG | 4 cut(s) | 17, 290, 424, 467 |
| CviQI | GTAC | 4 cut(s) | 323, 333, 448, 460 |
| EaeI | YGGCCR | 2 cut(s) | 410, 527 |
| Eam1104I | CTCTTC | 1 cut(s) | 562 |
| EarI | CTCTTC | 1 cut(s) | 562 |
| Eco32I | GATATC | 1 cut(s) | 196 |
| Eco47I | GGWCC | 3 cut(s) | 302, 488, 579 |
| EcoO109I | RGGNCCY | 1 cut(s) | 579 |
| EcoRII | CCWGG | 1 cut(s) | 93 |
| EcoRV | GATATC | 1 cut(s) | 196 |
| FaeI | CATG | 4 cut(s) | 20, 293, 427, 470 |
| FaiI | YATR | 9 cut(s) | 18, 167, 291, 329, 425, 458, 468, 540, 561 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 234, 266 |
| FatI | CATG | 4 cut(s) | 16, 289, 423, 466 |
| Fnu4HI | GCNGC | 3 cut(s) | 99, 152, 255 |
| Fsp4HI | GCNGC | 3 cut(s) | 99, 152, 255 |
| FspBI | CTAG | 1 cut(s) | 239 |
| GluI | GCNGC | 3 cut(s) | 99, 152, 255 |
| GsuI | CTGGAG | 1 cut(s) | 369 |
| HaeIII | GGCC | 3 cut(s) | 125, 412, 529 |
| Hin1II | CATG | 4 cut(s) | 20, 293, 427, 470 |
| HindIII | AAGCTT | 1 cut(s) | 396 |
| HphI | GGTGA | 3 cut(s) | 95, 221, 430 |
| Hpy166II | GTNNAC | 3 cut(s) | 262, 335, 517 |
| Hpy188I | TCNGA | 2 cut(s) | 232, 319 |
| Hpy188III | TCNNGA | 3 cut(s) | 35, 429, 577 |
| Hpy8I | GTNNAC | 3 cut(s) | 262, 335, 517 |
| HpyAV | CCTTC | 2 cut(s) | 72, 353 |
| HpyCH4IV | ACGT | 3 cut(s) | 434, 450, 462 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 122, 251 |
| HpySE526I | ACGT | 3 cut(s) | 434, 450, 462 |
| Hsp92II | CATG | 4 cut(s) | 20, 293, 427, 470 |
| Lsp1109I | GCAGC | 3 cut(s) | 85, 163, 241 |
| MaeI | CTAG | 1 cut(s) | 239 |
| MaeII | ACGT | 3 cut(s) | 434, 450, 462 |
| MboII | GAAGA | 6 cut(s) | 224, 227, 233, 334, 566, 579 |
| MfeI | CAATTG | 1 cut(s) | 119 |
| MhlI | GDGCHC | 1 cut(s) | 313 |
| MlsI | TGGCCA | 1 cut(s) | 412 |
| MluCI | AATT | 2 cut(s) | 119, 202 |
| MluNI | TGGCCA | 1 cut(s) | 412 |
| MnlI | CCTC | 5 cut(s) | 43, 76, 137, 557, 592 |
| Mox20I | TGGCCA | 1 cut(s) | 412 |
| MroXI | GAANNNNTTC | 1 cut(s) | 246 |
| MscI | TGGCCA | 1 cut(s) | 412 |
| MseI | TTAA | 4 cut(s) | 201, 375, 381, 593 |
| MslI | CAYNNNNRTG | 1 cut(s) | 110 |
| Msp20I | TGGCCA | 1 cut(s) | 412 |
| MspR9I | CCNGG | 1 cut(s) | 95 |
| MunI | CAATTG | 1 cut(s) | 119 |
| Mva1269I | GAATGC | 1 cut(s) | 105 |
| MvaI | CCWGG | 1 cut(s) | 95 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 122, 251 |
| NlaIII | CATG | 4 cut(s) | 20, 293, 427, 470 |
| NspI | RCATGY | 1 cut(s) | 427 |
| PctI | GAATGC | 1 cut(s) | 105 |
| PdmI | GAANNNNTTC | 1 cut(s) | 246 |
| PkrI | GCNGC | 3 cut(s) | 100, 153, 256 |
| PpuMI | RGGWCCY | 1 cut(s) | 579 |
| PshBI | ATTAAT | 1 cut(s) | 201 |
| PsiI | TTATAA | 1 cut(s) | 540 |
| Psp5II | RGGWCCY | 1 cut(s) | 579 |
| Psp6I | CCWGG | 1 cut(s) | 93 |
| PspGI | CCWGG | 1 cut(s) | 93 |
| PspPI | GGNCC | 4 cut(s) | 124, 302, 488, 579 |
| PspPPI | RGGWCCY | 1 cut(s) | 579 |
| RsaI | GTAC | 4 cut(s) | 324, 334, 449, 461 |
| RsaNI | GTAC | 4 cut(s) | 323, 333, 448, 460 |
| RseI | CAYNNNNRTG | 1 cut(s) | 110 |
| SaqAI | TTAA | 4 cut(s) | 201, 375, 381, 593 |
| SatI | GCNGC | 3 cut(s) | 99, 152, 255 |
| Sau96I | GGNCC | 4 cut(s) | 124, 302, 488, 579 |
| ScrFI | CCNGG | 1 cut(s) | 95 |
| SduI | GDGCHC | 1 cut(s) | 313 |
| SinI | GGWCC | 3 cut(s) | 302, 488, 579 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 110 |
| Sse9I | AATT | 2 cut(s) | 119, 202 |
| SspMI | CTAG | 1 cut(s) | 239 |
| StyD4I | CCNGG | 1 cut(s) | 93 |
| TaiI | ACGT | 3 cut(s) | 437, 453, 465 |
| TasI | AATT | 2 cut(s) | 119, 202 |
| TatI | WGTACW | 2 cut(s) | 322, 332 |
| Tru1I | TTAA | 4 cut(s) | 201, 375, 381, 593 |
| Tru9I | TTAA | 4 cut(s) | 201, 375, 381, 593 |
| TscAI | CASTG | 1 cut(s) | 352 |
| TseI | GCWGC | 3 cut(s) | 98, 151, 254 |
| TspDTI | ATGAA | 4 cut(s) | 104, 234, 278, 455 |
| TspRI | CASTG | 1 cut(s) | 352 |
| VpaK11BI | GGWCC | 3 cut(s) | 302, 488, 579 |
| VspI | ATTAAT | 1 cut(s) | 201 |
| XceI | RCATGY | 1 cut(s) | 427 |
| XmnI | GAANNNNTTC | 1 cut(s) | 246 |
| XspI | CTAG | 1 cut(s) | 239 |