Rh4AG137400

Plasma membrane ATPase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
Physical Location & Seq
Reverse (-)
32401771 .. 32411185
9415 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG137400.1

Sequence Viewer

Length: 183 bp
ATGCACGGATCGTTGCAATTCTTGGGTGGGTTGGGTTTGCTGAATTTGTGCGTGTATCATGGGAGGTGGATTGAGGAGGATGCTTCCGTTCTTATTTCTGGTGATATAATCAGCATTAAGCTTGGGGATAATATTCCAGCAGATGCTCGTCTCCTCGACGGTGATCCACTGAAAATTGATCGG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

61

Amino Acids

6.62

Weight (kDa)

4.69

Isoelectric Point (pI)

48.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 16, 158
AcsI RAATTY 1 cut(s) 43
AluBI AGCT 1 cut(s) 121
AluI AGCT 1 cut(s) 121
Alw26I GTCTC 1 cut(s) 155
AlwI GGATC 2 cut(s) 16, 158
ApoI RAATTY 1 cut(s) 43
AsuHPI GGTGA 2 cut(s) 113, 173
BcoDI GTCTC 1 cut(s) 155
BmsI GCATC 2 cut(s) 70, 133
BseGI GGATG 1 cut(s) 85
BseRI GAGGAG 2 cut(s) 89, 143
BsmAI GTCTC 1 cut(s) 155
BsmBI CGTCTC 1 cut(s) 155
Bsp143I GATC 3 cut(s) 8, 163, 178
BspPI GGATC 2 cut(s) 16, 158
BssMI GATC 3 cut(s) 8, 163, 178
Bst4CI ACNGT 1 cut(s) 161
BstF5I GGATG 1 cut(s) 85
BstKTI GATC 3 cut(s) 11, 166, 181
BstMAI GTCTC 1 cut(s) 155
BstMBI GATC 3 cut(s) 8, 163, 178
BtsCI GGATG 1 cut(s) 85
BtsIMutI CAGTG 1 cut(s) 167
CviAII CATG 1 cut(s) 59
CviJI RGCY 1 cut(s) 121
CviKI_1 RGCY 1 cut(s) 121
DpnI GATC 3 cut(s) 10, 165, 180
DpnII GATC 3 cut(s) 8, 163, 178
Esp3I CGTCTC 1 cut(s) 155
FaeI CATG 1 cut(s) 62
FaiI YATR 2 cut(s) 60, 107
FatI CATG 1 cut(s) 58
FokI GGATG 1 cut(s) 92
Hin1II CATG 1 cut(s) 62
HindIII AAGCTT 1 cut(s) 119
HphI GGTGA 2 cut(s) 113, 173
Hpy99I CGWCG 1 cut(s) 161
HpyCH4III ACNGT 1 cut(s) 161
HpyCH4V TGCA 2 cut(s) 4, 16
Hsp92II CATG 1 cut(s) 62
Kzo9I GATC 3 cut(s) 8, 163, 178
LpnPI CCDG 2 cut(s) 84, 150
LweI GCATC 2 cut(s) 70, 133
MalI GATC 3 cut(s) 10, 165, 180
MboI GATC 3 cut(s) 8, 163, 178
MluCI AATT 3 cut(s) 17, 43, 174
MnlI CCTC 4 cut(s) 57, 67, 70, 164
MseI TTAA 1 cut(s) 117
NdeII GATC 3 cut(s) 8, 163, 178
NlaIII CATG 1 cut(s) 62
SaqAI TTAA 1 cut(s) 117
Sau3AI GATC 3 cut(s) 8, 163, 178
SetI ASST 2 cut(s) 68, 123
SfaNI GCATC 2 cut(s) 70, 133
SgeI CNNG 9 cut(s) 17, 34, 64, 71, 111, 134, 149, 159, 167
Sse9I AATT 3 cut(s) 17, 43, 174
SspI AATATT 1 cut(s) 133
TaaI ACNGT 1 cut(s) 161
TaqI TCGA 1 cut(s) 156
TasI AATT 3 cut(s) 17, 43, 174
Tru1I TTAA 1 cut(s) 117
Tru9I TTAA 1 cut(s) 117
TscAI CASTG 1 cut(s) 174
TspGWI ACGGA 2 cut(s) 21, 76
TspRI CASTG 1 cut(s) 174
XapI RAATTY 1 cut(s) 43
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.