Cytochrome p450
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0323591 RchiOBHm_Chr1g0333521 RchiOBHm_Chr3g0459541 RchiOBHm_Chr4g0410101 RchiOBHm_Chr4g0410181 |
| rosa_laevigata | RLG00000029555 |
| rosa_multiflora | Rmu_sc0004133.1_g000006 |
| rosa_roxburghii | Rroxscaffold_7G00197180 |
| rosa_rugosa | Rorug06G0282800 Rorug07G0294900 |
| rosa_samantha | Rh4AG165500 Rh4AG182000 Rh4DG177600 Rh6CG075500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 67 |
| AgsI | TTSAA | 2 cut(s) | 169, 177 |
| AluBI | AGCT | 1 cut(s) | 190 |
| AluI | AGCT | 1 cut(s) | 190 |
| AlwI | GGATC | 1 cut(s) | 67 |
| AoxI | GGCC | 1 cut(s) | 86 |
| ArsI | GACNNNNNNTTYG | 1 cut(s) | 32 |
| AspS9I | GGNCC | 1 cut(s) | 86 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 56, 88 |
| BccI | CCATC | 2 cut(s) | 153, 190 |
| BfaI | CTAG | 1 cut(s) | 47 |
| BmgT120I | GGNCC | 1 cut(s) | 86 |
| BpmI | CTGGAG | 1 cut(s) | 32 |
| BsaJI | CCNNGG | 1 cut(s) | 154 |
| Bse1I | ACTGG | 1 cut(s) | 15 |
| BseDI | CCNNGG | 1 cut(s) | 154 |
| BseGI | GGATG | 2 cut(s) | 164, 182 |
| BseNI | ACTGG | 1 cut(s) | 15 |
| BshFI | GGCC | 1 cut(s) | 88 |
| BsmI | GAATGC | 1 cut(s) | 172 |
| BsnI | GGCC | 1 cut(s) | 88 |
| Bsp143I | GATC | 2 cut(s) | 59, 148 |
| BspANI | GGCC | 1 cut(s) | 88 |
| BspPI | GGATC | 1 cut(s) | 67 |
| BsrI | ACTGG | 1 cut(s) | 15 |
| BssECI | CCNNGG | 1 cut(s) | 154 |
| BssMI | GATC | 2 cut(s) | 59, 148 |
| BssT1I | CCWWGG | 1 cut(s) | 154 |
| Bst6I | CTCTTC | 1 cut(s) | 59 |
| BstF5I | GGATG | 2 cut(s) | 164, 182 |
| BstKTI | GATC | 2 cut(s) | 62, 151 |
| BstMBI | GATC | 2 cut(s) | 59, 148 |
| BsuRI | GGCC | 1 cut(s) | 88 |
| BtsCI | GGATG | 2 cut(s) | 164, 182 |
| Cfr13I | GGNCC | 1 cut(s) | 86 |
| CviJI | RGCY | 2 cut(s) | 88, 190 |
| CviKI_1 | RGCY | 2 cut(s) | 88, 190 |
| DpnI | GATC | 2 cut(s) | 61, 150 |
| DpnII | GATC | 2 cut(s) | 59, 148 |
| Eam1104I | CTCTTC | 1 cut(s) | 59 |
| EarI | CTCTTC | 1 cut(s) | 59 |
| Eco130I | CCWWGG | 1 cut(s) | 154 |
| EcoT14I | CCWWGG | 1 cut(s) | 154 |
| ErhI | CCWWGG | 1 cut(s) | 154 |
| FaiI | YATR | 2 cut(s) | 35, 137 |
| FokI | GGATG | 2 cut(s) | 169, 171 |
| FspBI | CTAG | 1 cut(s) | 47 |
| GsuI | CTGGAG | 1 cut(s) | 32 |
| HaeIII | GGCC | 1 cut(s) | 88 |
| HindIII | AAGCTT | 1 cut(s) | 188 |
| HinfI | GANTC | 1 cut(s) | 43 |
| Hpy188III | TCNNGA | 2 cut(s) | 29, 47 |
| HpyAV | CCTTC | 3 cut(s) | 50, 100, 115 |
| Kzo9I | GATC | 2 cut(s) | 59, 148 |
| LpnPI | CCDG | 1 cut(s) | 42 |
| MaeI | CTAG | 1 cut(s) | 47 |
| MalI | GATC | 2 cut(s) | 61, 150 |
| MboI | GATC | 2 cut(s) | 59, 148 |
| MboII | GAAGA | 2 cut(s) | 76, 130 |
| MluCI | AATT | 1 cut(s) | 90 |
| MnlI | CCTC | 1 cut(s) | 107 |
| MseI | TTAA | 1 cut(s) | 93 |
| MslI | CAYNNNNRTG | 1 cut(s) | 38 |
| Mva1269I | GAATGC | 1 cut(s) | 172 |
| NdeII | GATC | 2 cut(s) | 59, 148 |
| PctI | GAATGC | 1 cut(s) | 172 |
| PfeI | GAWTC | 1 cut(s) | 43 |
| PspPI | GGNCC | 1 cut(s) | 86 |
| RseI | CAYNNNNRTG | 1 cut(s) | 38 |
| SaqAI | TTAA | 1 cut(s) | 93 |
| Sau3AI | GATC | 2 cut(s) | 59, 148 |
| Sau96I | GGNCC | 1 cut(s) | 86 |
| SetI | ASST | 2 cut(s) | 99, 192 |
| SgeI | CNNG | 5 cut(s) | 23, 41, 59, 167, 181 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 38 |
| Sse9I | AATT | 1 cut(s) | 90 |
| SspMI | CTAG | 1 cut(s) | 47 |
| StyI | CCWWGG | 1 cut(s) | 154 |
| TaqI | TCGA | 1 cut(s) | 62 |
| TasI | AATT | 1 cut(s) | 90 |
| TfiI | GAWTC | 1 cut(s) | 43 |
| Tru1I | TTAA | 1 cut(s) | 93 |
| Tru9I | TTAA | 1 cut(s) | 93 |
| TspDTI | ATGAA | 2 cut(s) | 56, 119 |
| XbaI | TCTAGA | 1 cut(s) | 46 |
| XspI | CTAG | 1 cut(s) | 47 |