Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0002813

Physical Location & Seq

Genomic Coordinates Forward (+)

62894493 .. 62902167

Gene Structure 7675 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG318000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2100 bp

ATGGCTCAGCCCCTCTGCAATTCGCAACCTCCATTTCTCTCTTCCTTTCACCCCAAACACCACCACAAACTTCTTCAATTCACCTCCACCGCCAGAACCAACCGCCGAAGGGTCTCTCTCTCCTTTCATTTCTCTAATGCCGGACGGTCTCGATTTTCTCCGCTCAAATCGGCCTCCGTTAACGGCTATGCGGCGGAGGAGTACGAAAAGGAAAACGATAGAGCCGACGAAACCGAGGTCGAGCTATTCGAGCGGCTCCGGCGACTGTTCGGTTTTCTCCGGTCGATTTTTCCCGGCGGAGATTGGTGGAACTTCTCCGATGACGCCGAAATTAGTATCTTCGCGAAGCCGGTGACTGTGACGCGCGCGCTCACTCGGATGTGGGGCTTGGTTTCTCAGGACCGTTGGGTTATCTTCGCCGCTTTCTCTGCCCTAATTGTCGCCGCGCTATCGGAGATATCGATACCGCATTACTTGACGGCGTCAATCTTCTCGGCACAGAGCGGCGAAGTGGCCGTGTTTCGGCACAATGTGAGGCTGTTGGTGATTCTCTGTGTTGTTTCAGGAATATGCAGTGGTGTGCGAGGATGTTGTTTTGGCATTGCAAATATGATTCTTGTCAAGCGCATGAGGGAAACACTATACTCTTCACTTCTTGTTCAGGATATATTCTTTTTTGACACTGAAACAGTTGGTGATTTGACAAGTAGGCTTGGGGCAGATTGTCAGCAAGTGTCAAGAGTTATTGGAAATGATCTCAATATGATATTGCGGAATGTTCTTCAGGGAGCAGGAGCAATGATCTACTTGTTAGTTTTATCACGTCCCCTGGGTTTATCTGTGTTGGTGATATGTTCTACTCTAGCAGCAATTATGCTGGTTTATGGCCGGTACCAGAAGAAGGCAGCAAAACTAACTCAGGAGTTTACTGCTTCTGCCAATGAGGTTGCACAAGAGGCATTCTCTTTGGTGAGAACTGTCCGTGTTTATGGAACTGAAAAACAAGAACTTGGAAGGTACAAACTGTGGTTAGATAAATTAGCTGATATAAGCATACGGCAAAGTGCTGCGTATGGTTTTTGGAACTTGAGCTTCAATGCTCTTTACCACTCAACCCAGGTCATTGCTGTGCTGCTTGGAGGGATGTCTATTCTATCTGGTCATAATACAGCAGAGAAACTGACGAAGTTTATATTGTATAGTGAGTGGTTAATTTATGCAACATGGTGGGTGGGTGACAATTTGTCCAATCTGATGCAATCTGTTGGGGCAAGTGAAAAAGTCTTCCAATTAATGGATCTCATGCCCAGTGACCAATTTATATCAAAAGGATCAAAGTTGCAAAATCTGGTTGGAAATGTTGAGTTTGTAAACACTTCTTTCTATTATCCATCGAGGCCAACGGTCCCTGTACTGCAAAATATCAGCTTATCCGTGAAACCTAATGAAGTGGTTGCTATTGTTGGTCTTAGTGGTAGTGGAAAGAGCACACTCGTGAATCTTTTGCTCCGTCTCTATGAGCCAACAAATGGTCAGATTTTGATTGACGGCTGCCCTCTACAAGAGTTGGACGTCATGTGGTGGAGGGAAAGAATCGGATTTGTTGGACAGGAACCCAAACTGTTTCGCACAGACATTAGTTCAAACATTAGATATGGATGCACTAGAGATATCAGGCAGGAGGATGTTGAATGGGCTGCTAAGAAGGCATATGCACACGATTTCATTTTATCACTGCCCAAAGGTTATCAAACACTAGTTGATGATGATTTACTCAGTGGGGGGCAAAAGCAAAGAATTGCCATTGCGAGGGCCATTCTTAGGGACCCAACTATTTTGATCCTTGATGAAGCAACTAGTGCACTGGATGCAGAGAGTGAACACAATGTCAGGGGTGTTCTTCGTGCTGTCAGAAAAGACAAGACAACGAGGAGAAGTGTCGTAATAATTGCTCACAGGCTTTCCACCATACAAGCTGCTGACAGTATAGTGGTCATGGATAATGGTAGAATTGTTGAGGCCGGCAGTCACAGTGAGCTGCTCGTTAAGGATGGCCTCTATGCACGACTAACTAGAAGACAAGCTGATGCAGTGGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko02010 ko04142 map02010 map04142

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

699

Amino Acids

78.09

Weight (kDa)

8.94

Isoelectric Point (pI)

39.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_membrane	PF00664	140 - 405	4e-35	ABC transporter transmembrane region
ABC_tran	PF00005	472 - 620	4.4e-33	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002813)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G70610 AT1G70610
fragaria_vesca	FvH4_4g25540 FvH4_4g25540 FvH4_4g25540 FvH4_5g31960 FvH4_5g31960 FvH4_5g31960 FvH4_5g31960
malus_domestica	MD13G1101800.v1.1 MD17G1026800.v1.1
prunus_persica	Prupe.1G244000_v2.0.a1 Prupe.3G291900_v2.0.a1 Prupe.3G291900_v2.0.a1 Prupe.3G291900_v2.0.a1
pyrus_communis	pycom13g08890 pycom17g02190
rosa_chinensis	RchiOBHm_Chr2g0173091 RchiOBHm_Chr4g0432941
rosa_laevigata	RLG00000006800 RLG00000022157
rosa_multiflora	Rmu_sc0001762.1_g000046 Rmu_sc0011236.1_g000009 Rmu_sc0016400.1_g000001
rosa_roxburghii	Rroxscaffold_2G00079250 Rroxscaffold_5G00374340
rosa_rugosa	Rorug02G0565100 Rorug02G0565100 Rorug04G0264000 Rorug04G0264100 Rorug04G0264200 Rorug04G0264300
rosa_samantha	Rh2CG620900 Rh2DG669100 Rh4AG318000 Rh4CG341400 Rh4DG321300
rosa_wichuraiana	Rw2G052990 Rw4G027650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1575
Acc65I	GGTACC	1 cut(s)	891
AccB1I	GGYRCC	1 cut(s)	891
AccB7I	CCANNNNNTGG	2 cut(s)	1294, 1529
AccBSI	CCGCTC	3 cut(s)	163, 253, 504
AccII	CGCG	5 cut(s)	344, 364, 366, 368, 446
AclWI	GGATC	3 cut(s)	1305, 1339, 1834
AcoI	YGGCCR	2 cut(s)	513, 886
AcuI	CTGAAG	1 cut(s)	767
AcyI	GRCGYC	3 cut(s)	324, 482, 1572
AdeI	CACNNNGTG	1 cut(s)	532
AfaI	GTAC	4 cut(s)	203, 893, 1019, 1413
AfiI	CCNNNNNNNGG	7 cut(s)	109, 522, 901, 1294, 1529, 1809, 1821
AgsI	TTSAA	4 cut(s)	77, 1096, 1644, 1691
AhdI	GACNNNNNGTC	1 cut(s)	1243
AhlI	ACTAGT	2 cut(s)	1756, 1856
AjiI	CACGTC	1 cut(s)	824
AjnI	CCWGG	2 cut(s)	828, 1116
AleI	CACNNNNGTG	1 cut(s)	1493
AluBI	AGCT	7 cut(s)	244, 1043, 1092, 1428, 1976, 2038, 2084
AluI	AGCT	7 cut(s)	244, 1043, 1092, 1428, 1976, 2038, 2084
Alw21I	GWGCWC	2 cut(s)	1490, 1864
Alw26I	GTCTC	3 cut(s)	118, 153, 1517
Alw44I	GTGCAC	1 cut(s)	1860
AlwI	GGATC	3 cut(s)	1305, 1339, 1834
AoxI	GGCC	7 cut(s)	171, 513, 886, 1397, 1812, 2019, 2053
ApaLI	GTGCAC	1 cut(s)	1860
ApeKI	GCWGC	8 cut(s)	866, 905, 1067, 1132, 1551, 1697, 1976, 2038
ArsI	GACNNNNNNTTYG	2 cut(s)	222, 254
AseI	ATTAAT	1 cut(s)	1292
Asp718I	GGTACC	1 cut(s)	891
AspLEI	GCGC	5 cut(s)	366, 368, 370, 448, 627
AspS9I	GGNCC	4 cut(s)	400, 1405, 1812, 1825
AsuC2I	CCSGG	1 cut(s)	294
AsuHPI	GGTGA	8 cut(s)	41, 73, 364, 556, 707, 859, 982, 1247
AvaII	GGWCC	3 cut(s)	400, 1405, 1825
BaeGI	GKGCMC	1 cut(s)	1864
BanI	GGYRCC	1 cut(s)	891
BauI	CACGAG	1 cut(s)	1493
BbsI	GAAGAC	2 cut(s)	1276, 2083
Bbv12I	GWGCWC	2 cut(s)	1490, 1864
BbvI	GCAGC	8 cut(s)	878, 917, 1054, 1119, 1538, 1684, 1963, 2025
BccI	CCATC	2 cut(s)	1399, 2045
BceAI	ACGGC	5 cut(s)	199, 495, 500, 1073, 1564
BciT130I	CCWGG	2 cut(s)	830, 1118
BcnI	CCSGG	1 cut(s)	294
BcoDI	GTCTC	3 cut(s)	118, 153, 1517
BcuI	ACTAGT	2 cut(s)	1756, 1856
BfaI	CTAG	5 cut(s)	863, 1665, 1757, 1857, 2073
BlpI	GCTNAGC	1 cut(s)	6
Bme1390I	CCNGG	3 cut(s)	294, 830, 1118
Bme18I	GGWCC	3 cut(s)	400, 1405, 1825
BmeRI	GACNNNNNGTC	1 cut(s)	1243
BmgBI	CACGTC	1 cut(s)	824
BmgT120I	GGNCC	4 cut(s)	400, 1405, 1812, 1825
BmiI	GGNNCC	6 cut(s)	257, 893, 1407, 1614, 1826, 1827
BmrFI	CCNGG	3 cut(s)	294, 830, 1118
BmrI	ACTGGG	1 cut(s)	1302
BmsI	GCATC	4 cut(s)	1245, 1649, 1858, 2077
BmuI	ACTGGG	1 cut(s)	1302
BpiI	GAAGAC	2 cut(s)	1276, 2083
BplI	GAGNNNNNCTC	2 cut(s)	947, 979
Bpu1102I	GCTNAGC	1 cut(s)	6
BpuEI	CTTGAG	1 cut(s)	1108
BpuMI	CCSGG	1 cut(s)	294
Bsa29I	ATCGAT	1 cut(s)	461
BsaHI	GRCGYC	3 cut(s)	324, 482, 1572
BsaI	GGTCTC	2 cut(s)	118, 153
BsaJI	CCNNGG	4 cut(s)	234, 828, 829, 1116
BsaWI	WCCGGW	1 cut(s)	279
Bsc4I	CCNNNNNNNGG	7 cut(s)	109, 522, 901, 1294, 1529, 1809, 1821
Bse118I	RCCGGY	3 cut(s)	349, 888, 2021
Bse1I	ACTGG	2 cut(s)	1308, 1869
Bse3DI	GCAATG	4 cut(s)	600, 804, 1122, 1803
BseBI	CCWGG	2 cut(s)	830, 1118
BseCI	ATCGAT	1 cut(s)	461
BseDI	CCNNGG	4 cut(s)	234, 828, 829, 1116
BseGI	GGATG	7 cut(s)	384, 593, 1149, 1664, 1690, 1873, 2056
BseLI	CCNNNNNNNGG	7 cut(s)	109, 522, 901, 1294, 1529, 1809, 1821
BseMI	GCAATG	4 cut(s)	600, 804, 1122, 1803
BseMII	CTCAG	4 cut(s)	20, 410, 932, 1789
BseNI	ACTGG	2 cut(s)	1308, 1869
BsePI	GCGCGC	2 cut(s)	364, 366
BseRI	GAGGAG	2 cut(s)	212, 1945
BseSI	GKGCMC	1 cut(s)	1864
BseXI	GCAGC	8 cut(s)	878, 917, 1054, 1119, 1538, 1684, 1963, 2025
Bsh1236I	CGCG	5 cut(s)	344, 364, 366, 368, 446
Bsh1285I	CGRYCG	1 cut(s)	284
BshFI	GGCC	7 cut(s)	173, 515, 888, 1399, 1814, 2021, 2055
BshNI	GGYRCC	1 cut(s)	891
BshVI	ATCGAT	1 cut(s)	461
BsiEI	CGRYCG	1 cut(s)	284
BsiHKAI	GWGCWC	2 cut(s)	1490, 1864
BsiSI	CCGG	7 cut(s)	141, 259, 280, 294, 350, 889, 2022
BslFI	GGGAC	3 cut(s)	810, 1391, 1838
BslI	CCNNNNNNNGG	7 cut(s)	109, 522, 901, 1294, 1529, 1809, 1821
BsmAI	GTCTC	3 cut(s)	118, 153, 1517
BsmBI	CGTCTC	1 cut(s)	1517
BsmFI	GGGAC	3 cut(s)	810, 1391, 1838
BsmI	GAATGC	1 cut(s)	959
BsnI	GGCC	7 cut(s)	173, 515, 888, 1399, 1814, 2021, 2055
Bso31I	GGTCTC	2 cut(s)	118, 153
Bsp1286I	GDGCHC	2 cut(s)	1490, 1864
Bsp143I	GATC	5 cut(s)	754, 801, 1297, 1331, 1839
Bsp1720I	GCTNAGC	1 cut(s)	6
Bsp68I	TCGCGA	1 cut(s)	344
BspANI	GGCC	7 cut(s)	173, 515, 888, 1399, 1814, 2021, 2055
BspCNI	CTCAG	4 cut(s)	19, 409, 931, 1788
BspDI	ATCGAT	1 cut(s)	461
BspFNI	CGCG	5 cut(s)	344, 364, 366, 368, 446
BspLI	GGNNCC	6 cut(s)	257, 893, 1407, 1614, 1826, 1827
BspPI	GGATC	3 cut(s)	1305, 1339, 1834
BspT107I	GGYRCC	1 cut(s)	891
BspTNI	GGTCTC	2 cut(s)	118, 153
BsrBI	CCGCTC	3 cut(s)	163, 253, 504
BsrDI	GCAATG	4 cut(s)	600, 804, 1122, 1803
BsrFI	RCCGGY	3 cut(s)	349, 888, 2021
BsrI	ACTGG	2 cut(s)	1308, 1869
BssAI	RCCGGY	3 cut(s)	349, 888, 2021
BssECI	CCNNGG	4 cut(s)	234, 828, 829, 1116
BssHII	GCGCGC	2 cut(s)	364, 366
BssMI	GATC	5 cut(s)	754, 801, 1297, 1331, 1839
BssNI	GRCGYC	3 cut(s)	324, 482, 1572
BssSI	CACGAG	1 cut(s)	1493
Bst2BI	CACGAG	1 cut(s)	1493
Bst2UI	CCWGG	2 cut(s)	830, 1118
Bst6I	CTCTTC	2 cut(s)	46, 652
BstACI	GRCGYC	3 cut(s)	324, 482, 1572
BstAPI	GCANNNNNTGC	2 cut(s)	1859, 1868
BstC8I	GCNNGC	3 cut(s)	366, 368, 2023
BstDEI	CTNAG	7 cut(s)	6, 396, 918, 1469, 1701, 1775, 1820
BstF5I	GGATG	7 cut(s)	384, 593, 1149, 1664, 1690, 1873, 2056
BstFNI	CGCG	5 cut(s)	344, 364, 366, 368, 446
BstHHI	GCGC	5 cut(s)	366, 368, 370, 448, 627
BstKTI	GATC	5 cut(s)	757, 804, 1300, 1334, 1842
BstMAI	GTCTC	3 cut(s)	118, 153, 1517
BstMBI	GATC	5 cut(s)	754, 801, 1297, 1331, 1839
BstMCI	CGRYCG	1 cut(s)	284
BstMWI	GCNNNNNNNGC	7 cut(s)	250, 259, 428, 956, 1706, 1859, 1868
BstNI	CCWGG	2 cut(s)	830, 1118
BstSCI	CCNGG	3 cut(s)	292, 828, 1116
BstSLI	GKGCMC	1 cut(s)	1864
BstUI	CGCG	5 cut(s)	344, 364, 366, 368, 446
BstV1I	GCAGC	8 cut(s)	878, 917, 1054, 1119, 1538, 1684, 1963, 2025
BstV2I	GAAGAC	2 cut(s)	1276, 2083
BstX2I	RGATCY	1 cut(s)	1297
BstYI	RGATCY	1 cut(s)	1297
Bsu15I	ATCGAT	1 cut(s)	461
BsuRI	GGCC	7 cut(s)	173, 515, 888, 1399, 1814, 2021, 2055
BsuTUI	ATCGAT	1 cut(s)	461
BtrI	CACGTC	1 cut(s)	824
BtsCI	GGATG	7 cut(s)	384, 593, 1149, 1664, 1690, 1873, 2056
BtsI	GCAGTG	3 cut(s)	580, 1733, 2097
BtsIMutI	CAGTG	8 cut(s)	580, 681, 1315, 1733, 1783, 1862, 2038, 2097
BtuMI	TCGCGA	1 cut(s)	344
Cac8I	GCNNGC	3 cut(s)	366, 368, 2023
CfoI	GCGC	5 cut(s)	366, 368, 370, 448, 627
Cfr10I	RCCGGY	3 cut(s)	349, 888, 2021
Cfr13I	GGNCC	4 cut(s)	400, 1405, 1812, 1825
ClaI	ATCGAT	1 cut(s)	461
CseI	GACGC	3 cut(s)	332, 370, 471
Csp6I	GTAC	4 cut(s)	202, 892, 1018, 1412
CviAII	CATG	6 cut(s)	628, 1224, 1303, 1576, 1996, 2097
CviQI	GTAC	4 cut(s)	202, 892, 1018, 1412
DdeI	CTNAG	7 cut(s)	6, 396, 918, 1469, 1701, 1775, 1820
DpnI	GATC	5 cut(s)	756, 803, 1299, 1333, 1841
DpnII	GATC	5 cut(s)	754, 801, 1297, 1331, 1839
DraIII	CACNNNGTG	1 cut(s)	532
DriI	GACNNNNNGTC	1 cut(s)	1243
EaeI	YGGCCR	2 cut(s)	513, 886
Eam1104I	CTCTTC	2 cut(s)	46, 652
Eam1105I	GACNNNNNGTC	1 cut(s)	1243
EarI	CTCTTC	2 cut(s)	46, 652
EciI	GGCGGA	2 cut(s)	209, 312
Eco31I	GGTCTC	2 cut(s)	118, 153
Eco32I	GATATC	2 cut(s)	459, 1672
Eco47I	GGWCC	3 cut(s)	400, 1405, 1825
Eco57I	CTGAAG	1 cut(s)	767
EcoO109I	RGGNCCY	1 cut(s)	1825
EcoRII	CCWGG	2 cut(s)	828, 1116
EcoRV	GATATC	2 cut(s)	459, 1672
Esp3I	CGTCTC	1 cut(s)	1517
FaeI	CATG	6 cut(s)	631, 1227, 1306, 1579, 1999, 2100
FaqI	GGGAC	3 cut(s)	810, 1391, 1838
FatI	CATG	6 cut(s)	627, 1223, 1302, 1575, 1995, 2096
FauNDI	CATATG	1 cut(s)	1711
FokI	GGATG	7 cut(s)	391, 600, 1156, 1671, 1697, 1880, 2063
FspBI	CTAG	5 cut(s)	863, 1665, 1757, 1857, 2073
GlaI	GCGC	5 cut(s)	365, 367, 369, 447, 626
HaeIII	GGCC	7 cut(s)	173, 515, 888, 1399, 1814, 2021, 2055
HapII	CCGG	7 cut(s)	141, 259, 280, 294, 350, 889, 2022
HgaI	GACGC	3 cut(s)	332, 370, 471
HhaI	GCGC	5 cut(s)	366, 368, 370, 448, 627
Hin1I	GRCGYC	3 cut(s)	324, 482, 1572
Hin1II	CATG	6 cut(s)	631, 1227, 1306, 1579, 1999, 2100
Hin6I	GCGC	5 cut(s)	364, 366, 368, 446, 625
HinP1I	GCGC	5 cut(s)	364, 366, 368, 446, 625
HincII	GTYRAC	1 cut(s)	181
HindII	GTYRAC	1 cut(s)	181
HinfI	GANTC	4 cut(s)	547, 613, 1498, 1593
HpaI	GTTAAC	1 cut(s)	181
HpaII	CCGG	7 cut(s)	141, 259, 280, 294, 350, 889, 2022
HphI	GGTGA	8 cut(s)	41, 73, 364, 556, 707, 859, 982, 1247
Hpy166II	GTNNAC	5 cut(s)	181, 927, 1372, 1862, 1880
Hpy188I	TCNGA	7 cut(s)	319, 378, 454, 1254, 1536, 1598, 1913
Hpy188III	TCNNGA	8 cut(s)	150, 343, 398, 564, 662, 738, 920, 1495
Hpy8I	GTNNAC	5 cut(s)	181, 927, 1372, 1862, 1880
Hpy99I	CGWCG	1 cut(s)	230
HpyAV	CCTTC	4 cut(s)	102, 895, 1008, 1699
HpyCH4IV	ACGT	2 cut(s)	823, 1572
HpyF10VI	GCNNNNNNNGC	7 cut(s)	250, 259, 428, 956, 1706, 1859, 1868
HpyF3I	CTNAG	7 cut(s)	6, 396, 918, 1469, 1701, 1775, 1820
HpySE526I	ACGT	2 cut(s)	823, 1572
Hsp92I	GRCGYC	3 cut(s)	324, 482, 1572
Hsp92II	CATG	6 cut(s)	631, 1227, 1306, 1579, 1999, 2100
HspAI	GCGC	5 cut(s)	364, 366, 368, 446, 625
KflI	GGGWCCC	1 cut(s)	1825
KpnI	GGTACC	1 cut(s)	895
KroI	GCCGGC	1 cut(s)	2021
KroNI	GCCGGC	1 cut(s)	2023
KspAI	GTTAAC	1 cut(s)	181
Kzo9I	GATC	5 cut(s)	754, 801, 1297, 1331, 1839
LmnI	GCTCC	4 cut(s)	261, 788, 794, 1512
Lsp1109I	GCAGC	8 cut(s)	878, 917, 1054, 1119, 1538, 1684, 1963, 2025
LweI	GCATC	4 cut(s)	1245, 1649, 1858, 2077
MaeI	CTAG	5 cut(s)	863, 1665, 1757, 1857, 2073
MaeII	ACGT	2 cut(s)	823, 1572
MaeIII	GTNAC	5 cut(s)	352, 358, 1235, 1310, 2027
MalI	GATC	5 cut(s)	756, 803, 1299, 1333, 1841
MauBI	CGCGCGCG	1 cut(s)	364
MbiI	CCGCTC	3 cut(s)	163, 253, 504
MboI	GATC	5 cut(s)	754, 801, 1297, 1331, 1839
MflI	RGATCY	1 cut(s)	1297
MhlI	GDGCHC	2 cut(s)	1490, 1864
MmeI	TCCRAC	3 cut(s)	1333, 1548, 1585
MroNI	GCCGGC	1 cut(s)	2021
MseI	TTAA	4 cut(s)	180, 1211, 1292, 2046
MslI	CAYNNNNRTG	3 cut(s)	377, 1127, 1493
MspI	CCGG	7 cut(s)	141, 259, 280, 294, 350, 889, 2022
MspR9I	CCNGG	3 cut(s)	294, 830, 1118
Mva1269I	GAATGC	1 cut(s)	959
MvaI	CCWGG	2 cut(s)	830, 1118
MvnI	CGCG	5 cut(s)	344, 364, 366, 368, 446
MwoI	GCNNNNNNNGC	7 cut(s)	250, 259, 428, 956, 1706, 1859, 1868
NaeI	GCCGGC	1 cut(s)	2023
NciI	CCSGG	1 cut(s)	294
NdeI	CATATG	1 cut(s)	1711
NdeII	GATC	5 cut(s)	754, 801, 1297, 1331, 1839
NgoMIV	GCCGGC	1 cut(s)	2021
NlaIII	CATG	6 cut(s)	631, 1227, 1306, 1579, 1999, 2100
NlaIV	GGNNCC	6 cut(s)	257, 893, 1407, 1614, 1826, 1827
NmeAIII	GCCGAG	1 cut(s)	473
NmuCI	GTSAC	5 cut(s)	352, 358, 1235, 1310, 2027
NruI	TCGCGA	1 cut(s)	344
OliI	CACNNNNGTG	1 cut(s)	1493
PasI	CCCWGGG	1 cut(s)	829
PauI	GCGCGC	2 cut(s)	364, 366
PcsI	WCGNNNNNNNCGW	3 cut(s)	222, 246, 458
PctI	GAATGC	1 cut(s)	959
PdiI	GCCGGC	1 cut(s)	2023
PfeI	GAWTC	4 cut(s)	547, 613, 1498, 1593
PflFI	GACNNNGTC	1 cut(s)	481
PflMI	CCANNNNNTGG	2 cut(s)	1294, 1529
PpuMI	RGGWCCY	1 cut(s)	1825
PshBI	ATTAAT	1 cut(s)	1292
Psp5II	RGGWCCY	1 cut(s)	1825
Psp6I	CCWGG	2 cut(s)	828, 1116
PspGI	CCWGG	2 cut(s)	828, 1116
PspN4I	GGNNCC	6 cut(s)	257, 893, 1407, 1614, 1826, 1827
PspPI	GGNCC	4 cut(s)	400, 1405, 1812, 1825
PspPPI	RGGWCCY	1 cut(s)	1825
PsuI	RGATCY	1 cut(s)	1297
PsyI	GACNNNGTC	1 cut(s)	481
PteI	GCGCGC	2 cut(s)	364, 366
RruI	TCGCGA	1 cut(s)	344
RsaI	GTAC	4 cut(s)	203, 893, 1019, 1413
RsaNI	GTAC	4 cut(s)	202, 892, 1018, 1412
RseI	CAYNNNNRTG	3 cut(s)	377, 1127, 1493
SaqAI	TTAA	4 cut(s)	180, 1211, 1292, 2046
Sau3AI	GATC	5 cut(s)	754, 801, 1297, 1331, 1839
Sau96I	GGNCC	4 cut(s)	400, 1405, 1812, 1825
ScrFI	CCNGG	3 cut(s)	294, 830, 1118
SduI	GDGCHC	2 cut(s)	1490, 1864
SfaNI	GCATC	4 cut(s)	1245, 1649, 1858, 2077
SinI	GGWCC	3 cut(s)	400, 1405, 1825
SmiMI	CAYNNNNRTG	3 cut(s)	377, 1127, 1493
SmlI	CTYRAG	1 cut(s)	1087
SmoI	CTYRAG	1 cut(s)	1087
SpeI	ACTAGT	2 cut(s)	1756, 1856
SspMI	CTAG	5 cut(s)	863, 1665, 1757, 1857, 2073
StyD4I	CCNGG	3 cut(s)	292, 828, 1116
TaiI	ACGT	2 cut(s)	826, 1575
TaqI	TCGA	6 cut(s)	151, 240, 249, 284, 461, 1394
TatI	WGTACW	1 cut(s)	1411
TauI	GCSGC	5 cut(s)	194, 256, 422, 446, 507
TfiI	GAWTC	4 cut(s)	547, 613, 1498, 1593
Tru1I	TTAA	4 cut(s)	180, 1211, 1292, 2046
Tru9I	TTAA	4 cut(s)	180, 1211, 1292, 2046
TscAI	CASTG	8 cut(s)	580, 688, 1315, 1740, 1783, 1869, 2038, 2097
TseFI	GTSAC	5 cut(s)	352, 358, 1235, 1310, 2027
TseI	GCWGC	8 cut(s)	866, 905, 1067, 1132, 1551, 1697, 1976, 2038
Tsp45I	GTSAC	5 cut(s)	352, 358, 1235, 1310, 2027
TspDTI	ATGAA	4 cut(s)	116, 1461, 1714, 1863
TspGWI	ACGGA	4 cut(s)	166, 971, 1423, 1499
TspRI	CASTG	8 cut(s)	580, 688, 1315, 1740, 1783, 1869, 2038, 2097
Tth111I	GACNNNGTC	1 cut(s)	481
Van91I	CCANNNNNTGG	2 cut(s)	1294, 1529
VneI	GTGCAC	1 cut(s)	1860
VpaK11BI	GGWCC	3 cut(s)	400, 1405, 1825
VspI	ATTAAT	1 cut(s)	1292
XspI	CTAG	5 cut(s)	863, 1665, 1757, 1857, 2073
ZraI	GACGTC	1 cut(s)	1573

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.