Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0002813

Physical Location & Seq

Genomic Coordinates Forward (+)

54230875 .. 54235831

Gene Structure 4957 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G027650.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2121 bp

ATGCCTCTCTCTCTTTCCACTATGGCTCAGCCCCTCTGCAATTCGCAACCTCCATTTCTCTCTTCCCTTCACCCCAAACACCACCACAAACTTCTTCAATTCACCTCCACCGCCAGAACCAACCGCCGAAGGGTCTCTCTCTCCTTTCATTTCTCTAATGCCGGACGGTCTCGATTTTCTCCGCTCAAATCGGCCTCCGTTAACGGCTATGCGGCGGAGGAGTACGAAAAGGAAAACGATAGAGCCGACGAAACCGAGGTCGAGCTATTCGAGCGGCTCCGGCGACTGTTCGGTTTTCTCCGGTCGATTTTGCCCGGCGGAGATTGGTGGAACTTCTCCGATGACGCCGAAATTAGTATCTTCGCGAAGCCGGTGACTGTGACGCGCGCGCTCACTCGGATGTGGGGCTTGGTTTCTCAGGACCGTTGGGTTATCTTCGCCGCTTTCTCTGCCCTAATTGTCGCCGCGCTATCGGAGATATCGATACCACATTACTTGACGGCGTCAATCTTCTCGGCACAGAGCGGCGAAGTGGCCGTGTTTCGGCACAATGTGAGGCTGTTGGTGATTCTCTGTGTTGTTTCAGGAATATGCAGTGGTGTGCGAGGATGCTGTTTTGGCATTGCAAATATGATTCTTGTCAAGCGCATGAGGGAAACACTATACTCTTCACTTCTTGTTCAGGATATATTCTTTTTTGACACTGAAACAGTTGGTGATTTGACAAGTAGGCTTGGGGCAGATTGTCAGCAAGTGTCAAGAGTTATTGGAAATGATCTCAATTTGATATTGCGGAATGTTCTTCAGGGAGCAGGAGCAATGATCTACTTGTTAGTTTTATCACGTTCCCTTGGTTTATCTGTGTTGGTGATATGTTCTACTTTAGCAGCAATTATGCTGGTTTATGGCCGGTACCAGAAGAAGGCAGCAAAACTAACTCAGGAGTTTACTGCTTCTGCCAATGAGGTTGCACAAGAGGCATTCTCTTTGGTGAGAACCGTCCGTGTTTATGGAACTGAAAAACAAGAACTTGGAAGGTACAAACTGTGGTTAGATAAAGTAGCTGATATAAGCATACGGCAAAGTGCTGCGTATGGTTTTTGGAACTTGAGCTTCAATGCTCTTTACCACTCAACCCAGGTCATTGCTGTGCTGCTTGGAGGGATGTCTATTCTATCTGGTCATATTACAGCAGAGAAACTGACAAAGTTTATATTGTATAGTGAGTGGTTAATTTATGCAACATGGTGGGTGGGTGACAATTTATCCAATCTGATGCAATCTGTTGGGGCAAGTGAAAAAGTCTTCCAATTAATGGATCTCATGCCCAGTGACCAATTTATATCAAAAGGATCAAAGTTGCAAAATCTGGTTGGAAATGTTGAGTTTGTAAACACTTCTTTCTATTATCCATCGAGGCCAACGGTCCCTGTACTGCAAAATATCAGCTTATCCGTGAAACCTAATGAAGTGGTTGCTATTGTTGGTCTTAGTGGTAGTGGAAAGAGCACACTTGTGAATCTTTTGCTCCGTCTCTATGAGCCAACAAATGGTCAGATTTTGATTGACGGCTGCCCTCTACAAGAGTTGGACGTCATGTGGTGGAGGGAAAGAATCGGATTTGTTGGACAGGAACCCAAACTGTTTCGCACAGACATTAGTTCAAACATTAGATATGGATGCACTAGAGATATCAGGCAGGAGGATGTTGAATGGGCTGCCAAGCAGGCATATGCACACGATTTCATTTTATCACTGCCCAAAGGTTATCAAACACTAGTTGATGATGATTTACTCAGTGGGGGGCAAAAGCAAAGAATTGCCATTGCGAGGGCCATTCTTAGGGACCCAACTATTTTGATCCTTGATGAAGCAACTAGTGCACTGGATGCAGAGAGTGAACACAATGTCAGGGGCGTTCTTCGTGCTGTCAGAAAAGACAAGACAACGAGGAGAAGTGTCATAATAATTGCTCACAGGCTTTCCACCATACAAGCTGCTGACAGGATAGTGGTCATGGATAATGGTAGAATTGTTGAGGCCGGCAGTCACAGTGAGCTGCTCATTAAGGATGGCCTCTATGCACGACTAACTAGAAGACAAGCTGATGCAGTGGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko02010 ko04142 map02010 map04142

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

706

Amino Acids

78.81

Weight (kDa)

8.95

Isoelectric Point (pI)

40.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_membrane	PF00664	147 - 412	5.6e-36	ABC transporter transmembrane region
ABC_tran	PF00005	479 - 627	4e-33	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002813)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G70610 AT1G70610
fragaria_vesca	FvH4_4g25540 FvH4_4g25540 FvH4_4g25540 FvH4_5g31960 FvH4_5g31960 FvH4_5g31960 FvH4_5g31960
malus_domestica	MD13G1101800.v1.1 MD17G1026800.v1.1
prunus_persica	Prupe.1G244000_v2.0.a1 Prupe.3G291900_v2.0.a1 Prupe.3G291900_v2.0.a1 Prupe.3G291900_v2.0.a1
pyrus_communis	pycom13g08890 pycom17g02190
rosa_chinensis	RchiOBHm_Chr2g0173091 RchiOBHm_Chr4g0432941
rosa_laevigata	RLG00000006800 RLG00000022157
rosa_multiflora	Rmu_sc0001762.1_g000046 Rmu_sc0011236.1_g000009 Rmu_sc0016400.1_g000001
rosa_roxburghii	Rroxscaffold_2G00079250 Rroxscaffold_5G00374340
rosa_rugosa	Rorug02G0565100 Rorug02G0565100 Rorug04G0264000 Rorug04G0264100 Rorug04G0264200 Rorug04G0264300
rosa_samantha	Rh2CG620900 Rh2DG669100 Rh4AG318000 Rh4CG341400 Rh4DG321300
rosa_wichuraiana	Rw2G052990 Rw4G027650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1596
Acc65I	GGTACC	1 cut(s)	912
AccB1I	GGYRCC	1 cut(s)	912
AccB7I	CCANNNNNTGG	2 cut(s)	1315, 1550
AccBSI	CCGCTC	3 cut(s)	184, 274, 525
AccII	CGCG	5 cut(s)	365, 385, 387, 389, 467
AclWI	GGATC	3 cut(s)	1326, 1360, 1855
AcoI	YGGCCR	2 cut(s)	534, 907
AcuI	CTGAAG	1 cut(s)	788
AcyI	GRCGYC	3 cut(s)	345, 503, 1593
AdeI	CACNNNGTG	1 cut(s)	553
AfaI	GTAC	4 cut(s)	224, 914, 1040, 1434
AfiI	CCNNNNNNNGG	7 cut(s)	130, 543, 922, 1315, 1550, 1830, 1842
AgsI	TTSAA	4 cut(s)	98, 1117, 1665, 1712
AhlI	ACTAGT	2 cut(s)	1777, 1877
AjnI	CCWGG	1 cut(s)	1137
AleI	CACNNNNGTG	1 cut(s)	1514
AluBI	AGCT	7 cut(s)	265, 1064, 1113, 1449, 1997, 2059, 2105
AluI	AGCT	7 cut(s)	265, 1064, 1113, 1449, 1997, 2059, 2105
Alw21I	GWGCWC	2 cut(s)	1511, 1885
Alw26I	GTCTC	3 cut(s)	139, 174, 1538
Alw44I	GTGCAC	1 cut(s)	1881
AlwI	GGATC	3 cut(s)	1326, 1360, 1855
AoxI	GGCC	7 cut(s)	192, 534, 907, 1418, 1833, 2040, 2074
ApaLI	GTGCAC	1 cut(s)	1881
ApeKI	GCWGC	8 cut(s)	887, 926, 1088, 1153, 1572, 1718, 1997, 2059
ArsI	GACNNNNNNTTYG	2 cut(s)	243, 275
AseI	ATTAAT	1 cut(s)	1313
Asp718I	GGTACC	1 cut(s)	912
AspLEI	GCGC	5 cut(s)	387, 389, 391, 469, 648
AspS9I	GGNCC	4 cut(s)	421, 1426, 1833, 1846
AsuC2I	CCSGG	1 cut(s)	315
AsuHPI	GGTGA	8 cut(s)	62, 94, 385, 577, 728, 880, 1003, 1268
AvaII	GGWCC	3 cut(s)	421, 1426, 1846
BaeGI	GKGCMC	1 cut(s)	1885
BanI	GGYRCC	1 cut(s)	912
BbsI	GAAGAC	2 cut(s)	1297, 2104
Bbv12I	GWGCWC	2 cut(s)	1511, 1885
BbvI	GCAGC	8 cut(s)	899, 938, 1075, 1140, 1559, 1705, 1984, 2046
BccI	CCATC	2 cut(s)	1420, 2066
BceAI	ACGGC	5 cut(s)	220, 516, 521, 1094, 1585
BciT130I	CCWGG	1 cut(s)	1139
BcnI	CCSGG	1 cut(s)	315
BcoDI	GTCTC	3 cut(s)	139, 174, 1538
BcuI	ACTAGT	2 cut(s)	1777, 1877
BfaI	CTAG	4 cut(s)	1686, 1778, 1878, 2094
BglI	GCCNNNNNGGC	1 cut(s)	1727
BlpI	GCTNAGC	1 cut(s)	27
Bme1390I	CCNGG	2 cut(s)	315, 1139
Bme18I	GGWCC	3 cut(s)	421, 1426, 1846
BmgT120I	GGNCC	4 cut(s)	421, 1426, 1833, 1846
BmiI	GGNNCC	6 cut(s)	278, 914, 1428, 1635, 1847, 1848
BmrFI	CCNGG	2 cut(s)	315, 1139
BmrI	ACTGGG	1 cut(s)	1323
BmsI	GCATC	5 cut(s)	599, 1266, 1670, 1879, 2098
BmuI	ACTGGG	1 cut(s)	1323
BpiI	GAAGAC	2 cut(s)	1297, 2104
BplI	GAGNNNNNCTC	2 cut(s)	968, 1000
Bpu1102I	GCTNAGC	1 cut(s)	27
BpuEI	CTTGAG	1 cut(s)	1129
BpuMI	CCSGG	1 cut(s)	315
Bsa29I	ATCGAT	1 cut(s)	482
BsaHI	GRCGYC	3 cut(s)	345, 503, 1593
BsaI	GGTCTC	2 cut(s)	139, 174
BsaJI	CCNNGG	3 cut(s)	255, 850, 1137
BsaWI	WCCGGW	1 cut(s)	300
Bsc4I	CCNNNNNNNGG	7 cut(s)	130, 543, 922, 1315, 1550, 1830, 1842
Bse118I	RCCGGY	3 cut(s)	370, 909, 2042
Bse1I	ACTGG	2 cut(s)	1329, 1890
Bse3DI	GCAATG	4 cut(s)	621, 825, 1143, 1824
BseBI	CCWGG	1 cut(s)	1139
BseCI	ATCGAT	1 cut(s)	482
BseDI	CCNNGG	3 cut(s)	255, 850, 1137
BseGI	GGATG	7 cut(s)	405, 614, 1170, 1685, 1711, 1894, 2077
BseLI	CCNNNNNNNGG	7 cut(s)	130, 543, 922, 1315, 1550, 1830, 1842
BseMI	GCAATG	4 cut(s)	621, 825, 1143, 1824
BseMII	CTCAG	4 cut(s)	41, 431, 953, 1810
BseNI	ACTGG	2 cut(s)	1329, 1890
BsePI	GCGCGC	2 cut(s)	385, 387
BseRI	GAGGAG	2 cut(s)	233, 1966
BseSI	GKGCMC	1 cut(s)	1885
BseXI	GCAGC	8 cut(s)	899, 938, 1075, 1140, 1559, 1705, 1984, 2046
Bsh1236I	CGCG	5 cut(s)	365, 385, 387, 389, 467
Bsh1285I	CGRYCG	1 cut(s)	305
BshFI	GGCC	7 cut(s)	194, 536, 909, 1420, 1835, 2042, 2076
BshNI	GGYRCC	1 cut(s)	912
BshVI	ATCGAT	1 cut(s)	482
BsiEI	CGRYCG	1 cut(s)	305
BsiHKAI	GWGCWC	2 cut(s)	1511, 1885
BsiSI	CCGG	7 cut(s)	162, 280, 301, 315, 371, 910, 2043
BslFI	GGGAC	2 cut(s)	1412, 1859
BslI	CCNNNNNNNGG	7 cut(s)	130, 543, 922, 1315, 1550, 1830, 1842
BsmAI	GTCTC	3 cut(s)	139, 174, 1538
BsmBI	CGTCTC	1 cut(s)	1538
BsmFI	GGGAC	2 cut(s)	1412, 1859
BsmI	GAATGC	1 cut(s)	980
BsnI	GGCC	7 cut(s)	194, 536, 909, 1420, 1835, 2042, 2076
Bso31I	GGTCTC	2 cut(s)	139, 174
Bsp1286I	GDGCHC	2 cut(s)	1511, 1885
Bsp143I	GATC	5 cut(s)	775, 822, 1318, 1352, 1860
Bsp1720I	GCTNAGC	1 cut(s)	27
Bsp68I	TCGCGA	1 cut(s)	365
BspANI	GGCC	7 cut(s)	194, 536, 909, 1420, 1835, 2042, 2076
BspCNI	CTCAG	4 cut(s)	40, 430, 952, 1809
BspDI	ATCGAT	1 cut(s)	482
BspFNI	CGCG	5 cut(s)	365, 385, 387, 389, 467
BspLI	GGNNCC	6 cut(s)	278, 914, 1428, 1635, 1847, 1848
BspPI	GGATC	3 cut(s)	1326, 1360, 1855
BspT107I	GGYRCC	1 cut(s)	912
BspTNI	GGTCTC	2 cut(s)	139, 174
BsrBI	CCGCTC	3 cut(s)	184, 274, 525
BsrDI	GCAATG	4 cut(s)	621, 825, 1143, 1824
BsrFI	RCCGGY	3 cut(s)	370, 909, 2042
BsrI	ACTGG	2 cut(s)	1329, 1890
BssAI	RCCGGY	3 cut(s)	370, 909, 2042
BssECI	CCNNGG	3 cut(s)	255, 850, 1137
BssHII	GCGCGC	2 cut(s)	385, 387
BssMI	GATC	5 cut(s)	775, 822, 1318, 1352, 1860
BssNI	GRCGYC	3 cut(s)	345, 503, 1593
BssT1I	CCWWGG	1 cut(s)	850
Bst2UI	CCWGG	1 cut(s)	1139
Bst6I	CTCTTC	2 cut(s)	67, 673
BstACI	GRCGYC	3 cut(s)	345, 503, 1593
BstAPI	GCANNNNNTGC	2 cut(s)	1880, 1889
BstC8I	GCNNGC	4 cut(s)	387, 389, 1728, 2044
BstDEI	CTNAG	6 cut(s)	27, 417, 939, 1490, 1796, 1841
BstF5I	GGATG	7 cut(s)	405, 614, 1170, 1685, 1711, 1894, 2077
BstFNI	CGCG	5 cut(s)	365, 385, 387, 389, 467
BstHHI	GCGC	5 cut(s)	387, 389, 391, 469, 648
BstKTI	GATC	5 cut(s)	778, 825, 1321, 1355, 1863
BstMAI	GTCTC	3 cut(s)	139, 174, 1538
BstMBI	GATC	5 cut(s)	775, 822, 1318, 1352, 1860
BstMCI	CGRYCG	1 cut(s)	305
BstMWI	GCNNNNNNNGC	8 cut(s)	271, 280, 449, 618, 977, 1727, 1880, 1889
BstNI	CCWGG	1 cut(s)	1139
BstSCI	CCNGG	2 cut(s)	313, 1137
BstSLI	GKGCMC	1 cut(s)	1885
BstUI	CGCG	5 cut(s)	365, 385, 387, 389, 467
BstV1I	GCAGC	8 cut(s)	899, 938, 1075, 1140, 1559, 1705, 1984, 2046
BstV2I	GAAGAC	2 cut(s)	1297, 2104
BstX2I	RGATCY	1 cut(s)	1318
BstYI	RGATCY	1 cut(s)	1318
Bsu15I	ATCGAT	1 cut(s)	482
BsuRI	GGCC	7 cut(s)	194, 536, 909, 1420, 1835, 2042, 2076
BsuTUI	ATCGAT	1 cut(s)	482
BtsCI	GGATG	7 cut(s)	405, 614, 1170, 1685, 1711, 1894, 2077
BtsI	GCAGTG	3 cut(s)	601, 1754, 2118
BtsIMutI	CAGTG	8 cut(s)	601, 702, 1336, 1754, 1804, 1883, 2059, 2118
BtuMI	TCGCGA	1 cut(s)	365
Cac8I	GCNNGC	4 cut(s)	387, 389, 1728, 2044
CfoI	GCGC	5 cut(s)	387, 389, 391, 469, 648
Cfr10I	RCCGGY	3 cut(s)	370, 909, 2042
Cfr13I	GGNCC	4 cut(s)	421, 1426, 1833, 1846
ClaI	ATCGAT	1 cut(s)	482
CseI	GACGC	3 cut(s)	353, 391, 492
Csp6I	GTAC	4 cut(s)	223, 913, 1039, 1433
CspCI	CAANNNNNGTGG	2 cut(s)	477, 512
CviAII	CATG	6 cut(s)	649, 1245, 1324, 1597, 2017, 2118
CviQI	GTAC	4 cut(s)	223, 913, 1039, 1433
DdeI	CTNAG	6 cut(s)	27, 417, 939, 1490, 1796, 1841
DpnI	GATC	5 cut(s)	777, 824, 1320, 1354, 1862
DpnII	GATC	5 cut(s)	775, 822, 1318, 1352, 1860
DraIII	CACNNNGTG	1 cut(s)	553
EaeI	YGGCCR	2 cut(s)	534, 907
Eam1104I	CTCTTC	2 cut(s)	67, 673
EarI	CTCTTC	2 cut(s)	67, 673
EciI	GGCGGA	2 cut(s)	230, 333
Eco130I	CCWWGG	1 cut(s)	850
Eco31I	GGTCTC	2 cut(s)	139, 174
Eco32I	GATATC	2 cut(s)	480, 1693
Eco47I	GGWCC	3 cut(s)	421, 1426, 1846
Eco57I	CTGAAG	1 cut(s)	788
EcoO109I	RGGNCCY	1 cut(s)	1846
EcoRII	CCWGG	1 cut(s)	1137
EcoRV	GATATC	2 cut(s)	480, 1693
EcoT14I	CCWWGG	1 cut(s)	850
ErhI	CCWWGG	1 cut(s)	850
Esp3I	CGTCTC	1 cut(s)	1538
FaeI	CATG	6 cut(s)	652, 1248, 1327, 1600, 2020, 2121
FaqI	GGGAC	2 cut(s)	1412, 1859
FatI	CATG	6 cut(s)	648, 1244, 1323, 1596, 2016, 2117
FauNDI	CATATG	1 cut(s)	1732
FokI	GGATG	7 cut(s)	412, 621, 1177, 1692, 1718, 1901, 2084
FspBI	CTAG	4 cut(s)	1686, 1778, 1878, 2094
GlaI	GCGC	5 cut(s)	386, 388, 390, 468, 647
HaeIII	GGCC	7 cut(s)	194, 536, 909, 1420, 1835, 2042, 2076
HapII	CCGG	7 cut(s)	162, 280, 301, 315, 371, 910, 2043
HgaI	GACGC	3 cut(s)	353, 391, 492
HhaI	GCGC	5 cut(s)	387, 389, 391, 469, 648
Hin1I	GRCGYC	3 cut(s)	345, 503, 1593
Hin1II	CATG	6 cut(s)	652, 1248, 1327, 1600, 2020, 2121
Hin6I	GCGC	5 cut(s)	385, 387, 389, 467, 646
HinP1I	GCGC	5 cut(s)	385, 387, 389, 467, 646
HincII	GTYRAC	1 cut(s)	202
HindII	GTYRAC	1 cut(s)	202
HinfI	GANTC	4 cut(s)	568, 634, 1519, 1614
HpaI	GTTAAC	1 cut(s)	202
HpaII	CCGG	7 cut(s)	162, 280, 301, 315, 371, 910, 2043
HphI	GGTGA	8 cut(s)	62, 94, 385, 577, 728, 880, 1003, 1268
Hpy166II	GTNNAC	5 cut(s)	202, 948, 1393, 1883, 1901
Hpy188I	TCNGA	7 cut(s)	340, 399, 475, 1275, 1557, 1619, 1934
Hpy188III	TCNNGA	7 cut(s)	171, 364, 419, 585, 683, 759, 941
Hpy8I	GTNNAC	5 cut(s)	202, 948, 1393, 1883, 1901
Hpy99I	CGWCG	1 cut(s)	251
HpyAV	CCTTC	4 cut(s)	77, 123, 916, 1029
HpyCH4IV	ACGT	2 cut(s)	844, 1593
HpyF10VI	GCNNNNNNNGC	8 cut(s)	271, 280, 449, 618, 977, 1727, 1880, 1889
HpyF3I	CTNAG	6 cut(s)	27, 417, 939, 1490, 1796, 1841
HpySE526I	ACGT	2 cut(s)	844, 1593
Hsp92I	GRCGYC	3 cut(s)	345, 503, 1593
Hsp92II	CATG	6 cut(s)	652, 1248, 1327, 1600, 2020, 2121
HspAI	GCGC	5 cut(s)	385, 387, 389, 467, 646
KflI	GGGWCCC	1 cut(s)	1846
KpnI	GGTACC	1 cut(s)	916
KroI	GCCGGC	1 cut(s)	2042
KroNI	GCCGGC	1 cut(s)	2044
KspAI	GTTAAC	1 cut(s)	202
Kzo9I	GATC	5 cut(s)	775, 822, 1318, 1352, 1860
LmnI	GCTCC	4 cut(s)	282, 809, 815, 1533
Lsp1109I	GCAGC	8 cut(s)	899, 938, 1075, 1140, 1559, 1705, 1984, 2046
LweI	GCATC	5 cut(s)	599, 1266, 1670, 1879, 2098
MaeI	CTAG	4 cut(s)	1686, 1778, 1878, 2094
MaeII	ACGT	2 cut(s)	844, 1593
MaeIII	GTNAC	5 cut(s)	373, 379, 1256, 1331, 2048
MalI	GATC	5 cut(s)	777, 824, 1320, 1354, 1862
MauBI	CGCGCGCG	1 cut(s)	385
MbiI	CCGCTC	3 cut(s)	184, 274, 525
MboI	GATC	5 cut(s)	775, 822, 1318, 1352, 1860
MflI	RGATCY	1 cut(s)	1318
MhlI	GDGCHC	2 cut(s)	1511, 1885
MmeI	TCCRAC	3 cut(s)	1354, 1569, 1606
MroNI	GCCGGC	1 cut(s)	2042
MseI	TTAA	4 cut(s)	201, 1232, 1313, 2067
MslI	CAYNNNNRTG	3 cut(s)	398, 1148, 1514
MspI	CCGG	7 cut(s)	162, 280, 301, 315, 371, 910, 2043
MspR9I	CCNGG	2 cut(s)	315, 1139
Mva1269I	GAATGC	1 cut(s)	980
MvaI	CCWGG	1 cut(s)	1139
MvnI	CGCG	5 cut(s)	365, 385, 387, 389, 467
MwoI	GCNNNNNNNGC	8 cut(s)	271, 280, 449, 618, 977, 1727, 1880, 1889
NaeI	GCCGGC	1 cut(s)	2044
NciI	CCSGG	1 cut(s)	315
NdeI	CATATG	1 cut(s)	1732
NdeII	GATC	5 cut(s)	775, 822, 1318, 1352, 1860
NgoMIV	GCCGGC	1 cut(s)	2042
NlaIII	CATG	6 cut(s)	652, 1248, 1327, 1600, 2020, 2121
NlaIV	GGNNCC	6 cut(s)	278, 914, 1428, 1635, 1847, 1848
NmeAIII	GCCGAG	1 cut(s)	494
NmuCI	GTSAC	5 cut(s)	373, 379, 1256, 1331, 2048
NruI	TCGCGA	1 cut(s)	365
OliI	CACNNNNGTG	1 cut(s)	1514
PauI	GCGCGC	2 cut(s)	385, 387
PcsI	WCGNNNNNNNCGW	3 cut(s)	243, 267, 479
PctI	GAATGC	1 cut(s)	980
PdiI	GCCGGC	1 cut(s)	2044
PfeI	GAWTC	4 cut(s)	568, 634, 1519, 1614
PflFI	GACNNNGTC	1 cut(s)	502
PflMI	CCANNNNNTGG	2 cut(s)	1315, 1550
PpuMI	RGGWCCY	1 cut(s)	1846
PshBI	ATTAAT	1 cut(s)	1313
Psp5II	RGGWCCY	1 cut(s)	1846
Psp6I	CCWGG	1 cut(s)	1137
PspGI	CCWGG	1 cut(s)	1137
PspN4I	GGNNCC	6 cut(s)	278, 914, 1428, 1635, 1847, 1848
PspPI	GGNCC	4 cut(s)	421, 1426, 1833, 1846
PspPPI	RGGWCCY	1 cut(s)	1846
PsuI	RGATCY	1 cut(s)	1318
PsyI	GACNNNGTC	1 cut(s)	502
PteI	GCGCGC	2 cut(s)	385, 387
RruI	TCGCGA	1 cut(s)	365
RsaI	GTAC	4 cut(s)	224, 914, 1040, 1434
RsaNI	GTAC	4 cut(s)	223, 913, 1039, 1433
RseI	CAYNNNNRTG	3 cut(s)	398, 1148, 1514
SaqAI	TTAA	4 cut(s)	201, 1232, 1313, 2067
Sau3AI	GATC	5 cut(s)	775, 822, 1318, 1352, 1860
Sau96I	GGNCC	4 cut(s)	421, 1426, 1833, 1846
ScrFI	CCNGG	2 cut(s)	315, 1139
SduI	GDGCHC	2 cut(s)	1511, 1885
SfaNI	GCATC	5 cut(s)	599, 1266, 1670, 1879, 2098
SinI	GGWCC	3 cut(s)	421, 1426, 1846
SmiMI	CAYNNNNRTG	3 cut(s)	398, 1148, 1514
SmlI	CTYRAG	1 cut(s)	1108
SmoI	CTYRAG	1 cut(s)	1108
SpeI	ACTAGT	2 cut(s)	1777, 1877
SspMI	CTAG	4 cut(s)	1686, 1778, 1878, 2094
StyD4I	CCNGG	2 cut(s)	313, 1137
StyI	CCWWGG	1 cut(s)	850
TaiI	ACGT	2 cut(s)	847, 1596
TaqI	TCGA	6 cut(s)	172, 261, 270, 305, 482, 1415
TatI	WGTACW	1 cut(s)	1432
TauI	GCSGC	5 cut(s)	215, 277, 443, 467, 528
TfiI	GAWTC	4 cut(s)	568, 634, 1519, 1614
Tru1I	TTAA	4 cut(s)	201, 1232, 1313, 2067
Tru9I	TTAA	4 cut(s)	201, 1232, 1313, 2067
TscAI	CASTG	8 cut(s)	601, 709, 1336, 1761, 1804, 1890, 2059, 2118
TseFI	GTSAC	5 cut(s)	373, 379, 1256, 1331, 2048
TseI	GCWGC	8 cut(s)	887, 926, 1088, 1153, 1572, 1718, 1997, 2059
Tsp45I	GTSAC	5 cut(s)	373, 379, 1256, 1331, 2048
TspDTI	ATGAA	4 cut(s)	137, 1482, 1735, 1884
TspGWI	ACGGA	4 cut(s)	187, 992, 1444, 1520
TspRI	CASTG	8 cut(s)	601, 709, 1336, 1761, 1804, 1890, 2059, 2118
Tth111I	GACNNNGTC	1 cut(s)	502
Van91I	CCANNNNNTGG	2 cut(s)	1315, 1550
VneI	GTGCAC	1 cut(s)	1881
VpaK11BI	GGWCC	3 cut(s)	421, 1426, 1846
VspI	ATTAAT	1 cut(s)	1313
XspI	CTAG	4 cut(s)	1686, 1778, 1878, 2094
ZraI	GACGTC	1 cut(s)	1594

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.