Rh4BG060700

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
Physical Location & Seq
Reverse (-)
10909944 .. 10910105
162 bp
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UTR
Exon/CDS
Intron
Rh4BG060700.1

Sequence Viewer

Length: 162 bp
ATGGAGGAGGCGCCGATAGAGTGGTTCTGCGTCGCCGGAGAAGGCGCCGATGAAGACCGAAACAGAGGAGGCATTTTCCGGGTCGCCGATGAGGCCTCGACGGTGATTGCGCGACTCATCGTTTACGGCGGCGAGGGGCGAGATGGCGGAGGTGGCGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

53

Amino Acids

5.56

Weight (kDa)

4.25

Isoelectric Point (pI)

24.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 10, 44
AccII CGCG 1 cut(s) 112
AciI CCGC 2 cut(s) 129, 147
AcyI GRCGYC 2 cut(s) 11, 45
AoxI GGCC 1 cut(s) 93
AspLEI GCGC 3 cut(s) 13, 47, 112
AsuC2I CCSGG 1 cut(s) 80
AsuHPI GGTGA 1 cut(s) 115
BanI GGYRCC 2 cut(s) 10, 44
BbsI GAAGAC 1 cut(s) 60
BccI CCATC 1 cut(s) 137
BceAI ACGGC 1 cut(s) 142
BcnI CCSGG 1 cut(s) 80
BfoI RGCGCY 2 cut(s) 14, 48
BglI GCCNNNNNGGC 1 cut(s) 92
BisI GCNGC 1 cut(s) 130
BlsI GCNGC 1 cut(s) 131
Bme1390I CCNGG 1 cut(s) 80
BmiI GGNNCC 2 cut(s) 12, 46
BmrFI CCNGG 1 cut(s) 80
BpiI GAAGAC 1 cut(s) 60
BpuMI CCSGG 1 cut(s) 80
BsaHI GRCGYC 2 cut(s) 11, 45
BsaXI ACNNNNNCTCC 1 cut(s) 141
BseRI GAGGAG 2 cut(s) 20, 81
Bsh1236I CGCG 1 cut(s) 112
BshFI GGCC 1 cut(s) 95
BshNI GGYRCC 2 cut(s) 10, 44
BsiSI CCGG 2 cut(s) 36, 79
BsnI GGCC 1 cut(s) 95
BspACI CCGC 2 cut(s) 129, 147
BspANI GGCC 1 cut(s) 95
BspFNI CGCG 1 cut(s) 112
BspLI GGNNCC 2 cut(s) 12, 46
BspT107I GGYRCC 2 cut(s) 10, 44
BssNI GRCGYC 2 cut(s) 11, 45
Bst4CI ACNGT 1 cut(s) 103
BstACI GRCGYC 2 cut(s) 11, 45
BstFNI CGCG 1 cut(s) 112
BstH2I RGCGCY 2 cut(s) 14, 48
BstHHI GCGC 3 cut(s) 13, 47, 112
BstMWI GCNNNNNNNGC 2 cut(s) 92, 153
BstSCI CCNGG 1 cut(s) 78
BstUI CGCG 1 cut(s) 112
BstV2I GAAGAC 1 cut(s) 60
BsuRI GGCC 1 cut(s) 95
CfoI GCGC 3 cut(s) 13, 47, 112
CseI GACGC 1 cut(s) 19
CviJI RGCY 1 cut(s) 95
CviKI_1 RGCY 1 cut(s) 95
DinI GGCGCC 2 cut(s) 12, 46
EciI GGCGGA 1 cut(s) 162
Eco147I AGGCCT 1 cut(s) 95
EgeI GGCGCC 2 cut(s) 12, 46
EheI GGCGCC 2 cut(s) 12, 46
Fnu4HI GCNGC 1 cut(s) 130
Fsp4HI GCNGC 1 cut(s) 130
GlaI GCGC 3 cut(s) 12, 46, 111
GluI GCNGC 1 cut(s) 130
HaeII RGCGCY 2 cut(s) 14, 48
HaeIII GGCC 1 cut(s) 95
HapII CCGG 2 cut(s) 36, 79
HgaI GACGC 1 cut(s) 19
HhaI GCGC 3 cut(s) 13, 47, 112
Hin1I GRCGYC 2 cut(s) 11, 45
Hin6I GCGC 3 cut(s) 11, 45, 110
HinP1I GCGC 3 cut(s) 11, 45, 110
HinfI GANTC 1 cut(s) 114
HpaII CCGG 2 cut(s) 36, 79
HphI GGTGA 1 cut(s) 115
Hpy166II GTNNAC 1 cut(s) 124
Hpy8I GTNNAC 1 cut(s) 124
Hpy99I CGWCG 2 cut(s) 35, 103
HpyAV CCTTC 1 cut(s) 35
HpyCH4III ACNGT 1 cut(s) 103
HpyF10VI GCNNNNNNNGC 2 cut(s) 92, 153
Hsp92I GRCGYC 2 cut(s) 11, 45
HspAI GCGC 3 cut(s) 11, 45, 110
KasI GGCGCC 2 cut(s) 10, 44
LpnPI CCDG 2 cut(s) 49, 92
MboII GAAGA 1 cut(s) 65
Mly113I GGCGCC 2 cut(s) 11, 45
MlyI GAGTC 1 cut(s) 108
MnlI CCTC 6 cut(s) 59, 62, 85, 106, 127, 143
MspI CCGG 2 cut(s) 36, 79
MspR9I CCNGG 1 cut(s) 80
MvnI CGCG 1 cut(s) 112
MwoI GCNNNNNNNGC 2 cut(s) 92, 153
NarI GGCGCC 2 cut(s) 11, 45
NciI CCSGG 1 cut(s) 80
NlaIV GGNNCC 2 cut(s) 12, 46
PceI AGGCCT 1 cut(s) 95
PkrI GCNGC 1 cut(s) 131
PleI GAGTC 1 cut(s) 108
PluTI GGCGCC 2 cut(s) 14, 48
PpsI GAGTC 1 cut(s) 108
PspN4I GGNNCC 2 cut(s) 12, 46
SatI GCNGC 1 cut(s) 130
SchI GAGTC 1 cut(s) 108
ScrFI CCNGG 1 cut(s) 80
SetI ASST 1 cut(s) 154
SfoI GGCGCC 2 cut(s) 12, 46
SgeI CNNG 7 cut(s) 48, 91, 92, 109, 123, 145, 152
SseBI AGGCCT 1 cut(s) 95
SsiI CCGC 2 cut(s) 129, 147
SspDI GGCGCC 2 cut(s) 10, 44
StuI AGGCCT 1 cut(s) 95
StyD4I CCNGG 1 cut(s) 78
TaaI ACNGT 1 cut(s) 103
TaqI TCGA 1 cut(s) 98
TaqII GACCGA 1 cut(s) 72
TauI GCSGC 1 cut(s) 132
TspDTI ATGAA 1 cut(s) 66
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.