Phosphoinositide phospholipase C
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0370211 RchiOBHm_Chr4g0394401 RchiOBHm_Chr5g0010681 RchiOBHm_Chr6g0251411 |
| rosa_multiflora | Rmu_co8189356.1_g000001 Rmu_co8429665.1_g000001 Rmu_sc0000738.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00011360 Rroxscaffold_4G00287280 Rroxscaffold_5G00339410 |
| rosa_rugosa | Rorug03G0366200.1 |
| rosa_samantha | Rh2BG156200 Rh4CG056100 Rh4CG056300 Rh4CG058300 Rh5DG487700 Rh5DG487900 Rh6AG067800 Rh6BG025400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 60 |
| AcsI | RAATTY | 1 cut(s) | 197 |
| AdeI | CACNNNGTG | 1 cut(s) | 28 |
| AfaI | GTAC | 1 cut(s) | 245 |
| AgsI | TTSAA | 1 cut(s) | 43 |
| AjiI | CACGTC | 1 cut(s) | 163 |
| AluBI | AGCT | 4 cut(s) | 153, 174, 188, 193 |
| AluI | AGCT | 4 cut(s) | 153, 174, 188, 193 |
| Alw21I | GWGCWC | 1 cut(s) | 155 |
| AoxI | GGCC | 1 cut(s) | 60 |
| ApeKI | GCWGC | 1 cut(s) | 171 |
| ApoI | RAATTY | 1 cut(s) | 197 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 199, 231 |
| AsuHPI | GGTGA | 1 cut(s) | 58 |
| BalI | TGGCCA | 1 cut(s) | 62 |
| BanII | GRGCYC | 1 cut(s) | 155 |
| Bbv12I | GWGCWC | 1 cut(s) | 155 |
| BbvI | GCAGC | 1 cut(s) | 183 |
| BclI | TGATCA | 1 cut(s) | 157 |
| BisI | GCNGC | 1 cut(s) | 172 |
| BlpI | GCTNAGC | 1 cut(s) | 189 |
| BlsI | GCNGC | 1 cut(s) | 173 |
| BmgBI | CACGTC | 1 cut(s) | 163 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 189 |
| BsaBI | GATNNNNATC | 1 cut(s) | 84 |
| Bse8I | GATNNNNATC | 1 cut(s) | 84 |
| BseGI | GGATG | 2 cut(s) | 16, 74 |
| BseJI | GATNNNNATC | 1 cut(s) | 84 |
| BseMII | CTCAG | 1 cut(s) | 203 |
| BseXI | GCAGC | 1 cut(s) | 183 |
| BsgI | GTGCAG | 1 cut(s) | 25 |
| BshFI | GGCC | 1 cut(s) | 62 |
| BsiHKAI | GWGCWC | 1 cut(s) | 155 |
| BsnI | GGCC | 1 cut(s) | 62 |
| Bsp1286I | GDGCHC | 1 cut(s) | 155 |
| Bsp1407I | TGTACA | 1 cut(s) | 243 |
| Bsp143I | GATC | 1 cut(s) | 157 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 189 |
| BspANI | GGCC | 1 cut(s) | 62 |
| BspCNI | CTCAG | 1 cut(s) | 202 |
| BsrGI | TGTACA | 1 cut(s) | 243 |
| BssMI | GATC | 1 cut(s) | 157 |
| Bst4CI | ACNGT | 1 cut(s) | 260 |
| BstAUI | TGTACA | 1 cut(s) | 243 |
| BstDEI | CTNAG | 1 cut(s) | 189 |
| BstF5I | GGATG | 2 cut(s) | 16, 74 |
| BstKTI | GATC | 1 cut(s) | 160 |
| BstMBI | GATC | 1 cut(s) | 157 |
| BstV1I | GCAGC | 1 cut(s) | 183 |
| BsuRI | GGCC | 1 cut(s) | 62 |
| BtrI | CACGTC | 1 cut(s) | 163 |
| BtsCI | GGATG | 2 cut(s) | 16, 74 |
| Csp6I | GTAC | 1 cut(s) | 244 |
| CviJI | RGCY | 5 cut(s) | 62, 153, 174, 188, 193 |
| CviKI_1 | RGCY | 5 cut(s) | 62, 153, 174, 188, 193 |
| CviQI | GTAC | 1 cut(s) | 244 |
| DdeI | CTNAG | 1 cut(s) | 189 |
| DpnI | GATC | 1 cut(s) | 159 |
| DpnII | GATC | 1 cut(s) | 157 |
| DraIII | CACNNNGTG | 1 cut(s) | 28 |
| EaeI | YGGCCR | 1 cut(s) | 60 |
| Ecl136II | GAGCTC | 1 cut(s) | 153 |
| Eco24I | GRGCYC | 1 cut(s) | 155 |
| Eco53kI | GAGCTC | 1 cut(s) | 153 |
| EcoICRI | GAGCTC | 1 cut(s) | 153 |
| EcoT38I | GRGCYC | 1 cut(s) | 155 |
| FauNDI | CATATG | 1 cut(s) | 167 |
| FbaI | TGATCA | 1 cut(s) | 157 |
| Fnu4HI | GCNGC | 1 cut(s) | 172 |
| FokI | GGATG | 2 cut(s) | 23, 81 |
| FriOI | GRGCYC | 1 cut(s) | 155 |
| Fsp4HI | GCNGC | 1 cut(s) | 172 |
| GluI | GCNGC | 1 cut(s) | 172 |
| HaeIII | GGCC | 1 cut(s) | 62 |
| HinfI | GANTC | 2 cut(s) | 101, 232 |
| HphI | GGTGA | 1 cut(s) | 58 |
| Hpy188I | TCNGA | 3 cut(s) | 157, 204, 237 |
| HpyAV | CCTTC | 1 cut(s) | 37 |
| HpyCH4III | ACNGT | 1 cut(s) | 260 |
| HpyCH4IV | ACGT | 1 cut(s) | 162 |
| HpyCH4V | TGCA | 4 cut(s) | 6, 148, 171, 223 |
| HpyF3I | CTNAG | 1 cut(s) | 189 |
| HpySE526I | ACGT | 1 cut(s) | 162 |
| Ksp22I | TGATCA | 1 cut(s) | 157 |
| Kzo9I | GATC | 1 cut(s) | 157 |
| LpnPI | CCDG | 1 cut(s) | 160 |
| Lsp1109I | GCAGC | 1 cut(s) | 183 |
| MaeII | ACGT | 1 cut(s) | 162 |
| MaeIII | GTNAC | 3 cut(s) | 28, 71, 283 |
| MalI | GATC | 1 cut(s) | 159 |
| MboI | GATC | 1 cut(s) | 157 |
| MhlI | GDGCHC | 1 cut(s) | 155 |
| MlsI | TGGCCA | 1 cut(s) | 62 |
| MluCI | AATT | 1 cut(s) | 197 |
| MluNI | TGGCCA | 1 cut(s) | 62 |
| MnlI | CCTC | 2 cut(s) | 198, 259 |
| Mox20I | TGGCCA | 1 cut(s) | 62 |
| MscI | TGGCCA | 1 cut(s) | 62 |
| MseI | TTAA | 1 cut(s) | 84 |
| Msp20I | TGGCCA | 1 cut(s) | 62 |
| MspA1I | CMGCKG | 2 cut(s) | 174, 193 |
| NdeI | CATATG | 1 cut(s) | 167 |
| NdeII | GATC | 1 cut(s) | 157 |
| NmuCI | GTSAC | 2 cut(s) | 28, 71 |
| PfeI | GAWTC | 2 cut(s) | 101, 232 |
| PkrI | GCNGC | 1 cut(s) | 173 |
| Psp124BI | GAGCTC | 1 cut(s) | 155 |
| PvuII | CAGCTG | 2 cut(s) | 174, 193 |
| RsaI | GTAC | 1 cut(s) | 245 |
| RsaNI | GTAC | 1 cut(s) | 244 |
| SacI | GAGCTC | 1 cut(s) | 155 |
| SaqAI | TTAA | 1 cut(s) | 84 |
| SatI | GCNGC | 1 cut(s) | 172 |
| Sau3AI | GATC | 1 cut(s) | 157 |
| SduI | GDGCHC | 1 cut(s) | 155 |
| SetI | ASST | 6 cut(s) | 48, 155, 165, 176, 190, 195 |
| SgeI | CNNG | 4 cut(s) | 19, 88, 173, 187 |
| Sse9I | AATT | 1 cut(s) | 197 |
| SstI | GAGCTC | 1 cut(s) | 155 |
| TaaI | ACNGT | 1 cut(s) | 260 |
| TaiI | ACGT | 1 cut(s) | 165 |
| TasI | AATT | 1 cut(s) | 197 |
| TatI | WGTACW | 1 cut(s) | 243 |
| TfiI | GAWTC | 2 cut(s) | 101, 232 |
| Tru1I | TTAA | 1 cut(s) | 84 |
| Tru9I | TTAA | 1 cut(s) | 84 |
| TseFI | GTSAC | 2 cut(s) | 28, 71 |
| TseI | GCWGC | 1 cut(s) | 171 |
| Tsp45I | GTSAC | 2 cut(s) | 28, 71 |
| TspDTI | ATGAA | 1 cut(s) | 93 |
| XapI | RAATTY | 1 cut(s) | 197 |