Rh6BG025400

Phosphoinositide phospholipase C

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0012680
Physical Location & Seq
Reverse (-)
3618177 .. 3618869
693 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG025400.1

Sequence Viewer

Length: 318 bp
ATGCACAAGGGCTCAAATGATGAGATTTTTGATCCTAAAAAGACCTTGGTAGTGACAAAGACATTGAAGGTGAAAACATTTATGGCCAATGGATGTCACTTGGATTTTAATCAAACCCCCTTTGATTCATTCTCCCCACAGACTTCTACACAAAAGTTAGTAAGTATTTTGCAGAGCTCTGATCACGTCATATGCAGCTGGTTATTTATAGCTCAGCTGAAATTTCGGAGGACTTATGATTTGTTGCAAATGACGAATCAGACTTTGTACATAAACACCTACTGTTGTGAGGATATAATATATAATGTAACAATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00562 ko01100 ko04020 ko04070 ko04919 ko04933 map00562 map01100 map04020 map04070 map04919 map04933
Pfam Domains
Protein Families
C2 EF-hand_like PI-PLC-X PI-PLC-Y

Protein Analysis

105

Amino Acids

12.19

Weight (kDa)

7.67

Isoelectric Point (pI)

48.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 26
AcoI YGGCCR 1 cut(s) 84
AcsI RAATTY 1 cut(s) 221
AfaI GTAC 1 cut(s) 269
AgsI TTSAA 1 cut(s) 67
AjiI CACGTC 1 cut(s) 187
AluBI AGCT 4 cut(s) 177, 198, 212, 217
AluI AGCT 4 cut(s) 177, 198, 212, 217
Alw21I GWGCWC 1 cut(s) 179
AlwI GGATC 1 cut(s) 26
AoxI GGCC 1 cut(s) 84
ApeKI GCWGC 1 cut(s) 195
ApoI RAATTY 1 cut(s) 221
ArsI GACNNNNNNTTYG 2 cut(s) 223, 255
AsuHPI GGTGA 1 cut(s) 82
BalI TGGCCA 1 cut(s) 86
BanII GRGCYC 2 cut(s) 14, 179
Bbv12I GWGCWC 1 cut(s) 179
BbvI GCAGC 1 cut(s) 207
BclI TGATCA 1 cut(s) 181
BisI GCNGC 1 cut(s) 196
BlpI GCTNAGC 1 cut(s) 213
BlsI GCNGC 1 cut(s) 197
BmgBI CACGTC 1 cut(s) 187
Bpu1102I GCTNAGC 1 cut(s) 213
BsaBI GATNNNNATC 1 cut(s) 108
BsaJI CCNNGG 1 cut(s) 45
Bse8I GATNNNNATC 1 cut(s) 108
BseDI CCNNGG 1 cut(s) 45
BseGI GGATG 1 cut(s) 98
BseJI GATNNNNATC 1 cut(s) 108
BseMII CTCAG 1 cut(s) 227
BseXI GCAGC 1 cut(s) 207
BshFI GGCC 1 cut(s) 86
BsiHKAI GWGCWC 1 cut(s) 179
BsnI GGCC 1 cut(s) 86
Bsp1286I GDGCHC 2 cut(s) 14, 179
Bsp1407I TGTACA 1 cut(s) 267
Bsp143I GATC 2 cut(s) 31, 181
Bsp1720I GCTNAGC 1 cut(s) 213
BspANI GGCC 1 cut(s) 86
BspCNI CTCAG 1 cut(s) 226
BspPI GGATC 1 cut(s) 26
BsrGI TGTACA 1 cut(s) 267
BssECI CCNNGG 1 cut(s) 45
BssMI GATC 2 cut(s) 31, 181
BssT1I CCWWGG 1 cut(s) 45
Bst4CI ACNGT 1 cut(s) 284
BstAUI TGTACA 1 cut(s) 267
BstDEI CTNAG 1 cut(s) 213
BstF5I GGATG 1 cut(s) 98
BstKTI GATC 2 cut(s) 34, 184
BstMBI GATC 2 cut(s) 31, 181
BstV1I GCAGC 1 cut(s) 207
BsuRI GGCC 1 cut(s) 86
BtrI CACGTC 1 cut(s) 187
BtsCI GGATG 1 cut(s) 98
Csp6I GTAC 1 cut(s) 268
CviJI RGCY 6 cut(s) 12, 86, 177, 198, 212, 217
CviKI_1 RGCY 6 cut(s) 12, 86, 177, 198, 212, 217
CviQI GTAC 1 cut(s) 268
DdeI CTNAG 1 cut(s) 213
DpnI GATC 2 cut(s) 33, 183
DpnII GATC 2 cut(s) 31, 181
EaeI YGGCCR 1 cut(s) 84
Ecl136II GAGCTC 1 cut(s) 177
Eco130I CCWWGG 1 cut(s) 45
Eco24I GRGCYC 2 cut(s) 14, 179
Eco53kI GAGCTC 1 cut(s) 177
EcoICRI GAGCTC 1 cut(s) 177
EcoT14I CCWWGG 1 cut(s) 45
EcoT38I GRGCYC 2 cut(s) 14, 179
ErhI CCWWGG 1 cut(s) 45
FaiI YATR 9 cut(s) 83, 191, 193, 209, 237, 272, 296, 301, 303
FauNDI CATATG 1 cut(s) 191
FbaI TGATCA 1 cut(s) 181
Fnu4HI GCNGC 1 cut(s) 196
FokI GGATG 1 cut(s) 105
FriOI GRGCYC 2 cut(s) 14, 179
Fsp4HI GCNGC 1 cut(s) 196
GluI GCNGC 1 cut(s) 196
HaeIII GGCC 1 cut(s) 86
HinfI GANTC 2 cut(s) 125, 256
HphI GGTGA 1 cut(s) 82
Hpy188I TCNGA 3 cut(s) 181, 228, 261
HpyAV CCTTC 1 cut(s) 61
HpyCH4III ACNGT 1 cut(s) 284
HpyCH4IV ACGT 1 cut(s) 186
HpyCH4V TGCA 4 cut(s) 4, 172, 195, 247
HpyF3I CTNAG 1 cut(s) 213
HpySE526I ACGT 1 cut(s) 186
Ksp22I TGATCA 1 cut(s) 181
Kzo9I GATC 2 cut(s) 31, 181
LpnPI CCDG 1 cut(s) 184
Lsp1109I GCAGC 1 cut(s) 207
MaeII ACGT 1 cut(s) 186
MaeIII GTNAC 3 cut(s) 52, 95, 307
MalI GATC 2 cut(s) 33, 183
MboI GATC 2 cut(s) 31, 181
MhlI GDGCHC 2 cut(s) 14, 179
MlsI TGGCCA 1 cut(s) 86
MluCI AATT 1 cut(s) 221
MluNI TGGCCA 1 cut(s) 86
MnlI CCTC 2 cut(s) 222, 283
Mox20I TGGCCA 1 cut(s) 86
MscI TGGCCA 1 cut(s) 86
MseI TTAA 1 cut(s) 108
Msp20I TGGCCA 1 cut(s) 86
MspA1I CMGCKG 2 cut(s) 198, 217
NdeI CATATG 1 cut(s) 191
NdeII GATC 2 cut(s) 31, 181
NmuCI GTSAC 2 cut(s) 52, 95
PfeI GAWTC 2 cut(s) 125, 256
PkrI GCNGC 1 cut(s) 197
Psp124BI GAGCTC 1 cut(s) 179
PvuII CAGCTG 2 cut(s) 198, 217
RsaI GTAC 1 cut(s) 269
RsaNI GTAC 1 cut(s) 268
SacI GAGCTC 1 cut(s) 179
SaqAI TTAA 1 cut(s) 108
SatI GCNGC 1 cut(s) 196
Sau3AI GATC 2 cut(s) 31, 181
SduI GDGCHC 2 cut(s) 14, 179
SetI ASST 8 cut(s) 47, 72, 179, 189, 200, 214, 219, 281
SgeI CNNG 5 cut(s) 19, 58, 112, 197, 211
Sse9I AATT 1 cut(s) 221
SstI GAGCTC 1 cut(s) 179
StyI CCWWGG 1 cut(s) 45
TaaI ACNGT 1 cut(s) 284
TaiI ACGT 1 cut(s) 189
TasI AATT 1 cut(s) 221
TatI WGTACW 1 cut(s) 267
TfiI GAWTC 2 cut(s) 125, 256
Tru1I TTAA 1 cut(s) 108
Tru9I TTAA 1 cut(s) 108
TseFI GTSAC 2 cut(s) 52, 95
TseI GCWGC 1 cut(s) 195
Tsp45I GTSAC 2 cut(s) 52, 95
TspDTI ATGAA 1 cut(s) 117
XapI RAATTY 1 cut(s) 221
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.