Bacterial trigger factor protein (TF)
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g10500 FvH4_4g10500 FvH4_4g10500 FvH4_4g10500 FvH4_4g10500 FvH4_4g10500 |
| malus_domestica | MD08G1249800.v1.1 |
| prunus_persica | Prupe.1G586900_v2.0.a1 Prupe.1G586900_v2.0.a1 |
| pyrus_communis | pycom08g21620 |
| rosa_chinensis | RchiOBHm_Chr4g0406061 |
| rosa_laevigata | RLG00000008799 |
| rosa_multiflora | Rmu_sc0001630.1_g000028 |
| rosa_roxburghii | Rroxscaffold_5G00350800 |
| rosa_rugosa | Rorug04G0065100 |
| rosa_samantha | Rh4AG135600 Rh4BG132700 Rh4CG143500 Rh4DG130700 |
| rosa_wichuraiana | Rw4G011050 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 301 |
| AciI | CCGC | 2 cut(s) | 114, 236 |
| AcsI | RAATTY | 2 cut(s) | 37, 364 |
| AcyI | GRCGYC | 1 cut(s) | 5 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 50, 392 |
| AgsI | TTSAA | 2 cut(s) | 259, 449 |
| AjiI | CACGTC | 1 cut(s) | 319 |
| AjnI | CCWGG | 2 cut(s) | 191, 391 |
| AleI | CACNNNNGTG | 1 cut(s) | 161 |
| AluBI | AGCT | 3 cut(s) | 138, 209, 380 |
| AluI | AGCT | 3 cut(s) | 138, 209, 380 |
| AoxI | GGCC | 1 cut(s) | 194 |
| ApeKI | GCWGC | 1 cut(s) | 206 |
| ApoI | RAATTY | 2 cut(s) | 37, 364 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 113, 145 |
| BauI | CACGAG | 1 cut(s) | 159 |
| BbvI | GCAGC | 1 cut(s) | 218 |
| BciT130I | CCWGG | 2 cut(s) | 193, 393 |
| BclI | TGATCA | 1 cut(s) | 349 |
| BisI | GCNGC | 2 cut(s) | 114, 207 |
| BlsI | GCNGC | 2 cut(s) | 115, 208 |
| Bme1390I | CCNGG | 2 cut(s) | 193, 393 |
| BmgBI | CACGTC | 1 cut(s) | 319 |
| BmrFI | CCNGG | 2 cut(s) | 193, 393 |
| BmsI | GCATC | 1 cut(s) | 236 |
| BsaHI | GRCGYC | 1 cut(s) | 5 |
| BsaJI | CCNNGG | 1 cut(s) | 49 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 50, 392 |
| Bse1I | ACTGG | 1 cut(s) | 386 |
| Bse3DI | GCAATG | 1 cut(s) | 231 |
| BseBI | CCWGG | 2 cut(s) | 193, 393 |
| BseDI | CCNNGG | 1 cut(s) | 49 |
| BseGI | GGATG | 2 cut(s) | 227, 334 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 50, 392 |
| BseMI | GCAATG | 1 cut(s) | 231 |
| BseNI | ACTGG | 1 cut(s) | 386 |
| BseXI | GCAGC | 1 cut(s) | 218 |
| BseYI | CCCAGC | 1 cut(s) | 323 |
| BshFI | GGCC | 1 cut(s) | 196 |
| BslFI | GGGAC | 1 cut(s) | 268 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 50, 392 |
| BsmFI | GGGAC | 1 cut(s) | 268 |
| BsnI | GGCC | 1 cut(s) | 196 |
| Bsp143I | GATC | 1 cut(s) | 349 |
| BspACI | CCGC | 2 cut(s) | 114, 236 |
| BspANI | GGCC | 1 cut(s) | 196 |
| BsrDI | GCAATG | 1 cut(s) | 231 |
| BsrI | ACTGG | 1 cut(s) | 386 |
| BssECI | CCNNGG | 1 cut(s) | 49 |
| BssMI | GATC | 1 cut(s) | 349 |
| BssNAI | GTATAC | 1 cut(s) | 302 |
| BssNI | GRCGYC | 1 cut(s) | 5 |
| BssSI | CACGAG | 1 cut(s) | 159 |
| BssT1I | CCWWGG | 1 cut(s) | 49 |
| Bst1107I | GTATAC | 1 cut(s) | 302 |
| Bst2BI | CACGAG | 1 cut(s) | 159 |
| Bst2UI | CCWGG | 2 cut(s) | 193, 393 |
| Bst4CI | ACNGT | 1 cut(s) | 28 |
| BstACI | GRCGYC | 1 cut(s) | 5 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 233 |
| BstC8I | GCNNGC | 2 cut(s) | 184, 373 |
| BstF5I | GGATG | 2 cut(s) | 227, 334 |
| BstKTI | GATC | 1 cut(s) | 352 |
| BstMBI | GATC | 1 cut(s) | 349 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 233, 377 |
| BstNI | CCWGG | 2 cut(s) | 193, 393 |
| BstSCI | CCNGG | 2 cut(s) | 191, 391 |
| BstV1I | GCAGC | 1 cut(s) | 218 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 124 |
| BstZ17I | GTATAC | 1 cut(s) | 302 |
| BsuRI | GGCC | 1 cut(s) | 196 |
| BtrI | CACGTC | 1 cut(s) | 319 |
| BtsCI | GGATG | 2 cut(s) | 227, 334 |
| BtsI | GCAGTG | 1 cut(s) | 82 |
| BtsIMutI | CAGTG | 1 cut(s) | 82 |
| Cac8I | GCNNGC | 2 cut(s) | 184, 373 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 253, 288 |
| CviAII | CATG | 3 cut(s) | 61, 167, 427 |
| CviJI | RGCY | 5 cut(s) | 138, 196, 209, 323, 380 |
| CviKI_1 | RGCY | 5 cut(s) | 138, 196, 209, 323, 380 |
| DpnI | GATC | 1 cut(s) | 351 |
| DpnII | GATC | 1 cut(s) | 349 |
| Eco130I | CCWWGG | 1 cut(s) | 49 |
| EcoRII | CCWGG | 2 cut(s) | 191, 391 |
| EcoT14I | CCWWGG | 1 cut(s) | 49 |
| ErhI | CCWWGG | 1 cut(s) | 49 |
| FaeI | CATG | 3 cut(s) | 64, 170, 430 |
| FaiI | YATR | 7 cut(s) | 62, 133, 135, 147, 168, 302, 428 |
| FaqI | GGGAC | 1 cut(s) | 268 |
| FatI | CATG | 3 cut(s) | 60, 166, 426 |
| FbaI | TGATCA | 1 cut(s) | 349 |
| FblI | GTMKAC | 1 cut(s) | 301 |
| Fnu4HI | GCNGC | 2 cut(s) | 114, 207 |
| FokI | GGATG | 2 cut(s) | 214, 341 |
| Fsp4HI | GCNGC | 2 cut(s) | 114, 207 |
| GluI | GCNGC | 2 cut(s) | 114, 207 |
| GsaI | CCCAGC | 1 cut(s) | 327 |
| HaeIII | GGCC | 1 cut(s) | 196 |
| Hin1I | GRCGYC | 1 cut(s) | 5 |
| Hin1II | CATG | 3 cut(s) | 64, 170, 430 |
| HincII | GTYRAC | 1 cut(s) | 12 |
| HindII | GTYRAC | 1 cut(s) | 12 |
| HinfI | GANTC | 1 cut(s) | 281 |
| Hpy166II | GTNNAC | 3 cut(s) | 12, 302, 316 |
| Hpy188III | TCNNGA | 1 cut(s) | 471 |
| Hpy8I | GTNNAC | 3 cut(s) | 12, 302, 316 |
| Hpy99I | CGWCG | 3 cut(s) | 10, 19, 37 |
| HpyAV | CCTTC | 1 cut(s) | 472 |
| HpyCH4III | ACNGT | 1 cut(s) | 28 |
| HpyCH4IV | ACGT | 1 cut(s) | 318 |
| HpyCH4V | TGCA | 3 cut(s) | 64, 166, 182 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 233, 377 |
| HpySE526I | ACGT | 1 cut(s) | 318 |
| Hsp92I | GRCGYC | 1 cut(s) | 5 |
| Hsp92II | CATG | 3 cut(s) | 64, 170, 430 |
| Ksp22I | TGATCA | 1 cut(s) | 349 |
| Kzo9I | GATC | 1 cut(s) | 349 |
| LmnI | GCTCC | 1 cut(s) | 385 |
| Lsp1109I | GCAGC | 1 cut(s) | 218 |
| LweI | GCATC | 1 cut(s) | 236 |
| MaeII | ACGT | 1 cut(s) | 318 |
| MaeIII | GTNAC | 1 cut(s) | 457 |
| MalI | GATC | 1 cut(s) | 351 |
| MboI | GATC | 1 cut(s) | 349 |
| MboII | GAAGA | 1 cut(s) | 251 |
| MfeI | CAATTG | 1 cut(s) | 449 |
| MluCI | AATT | 3 cut(s) | 37, 364, 449 |
| MlyI | GAGTC | 1 cut(s) | 290 |
| MnlI | CCTC | 3 cut(s) | 55, 217, 407 |
| MslI | CAYNNNNRTG | 2 cut(s) | 122, 161 |
| MspA1I | CMGCKG | 1 cut(s) | 209 |
| MspR9I | CCNGG | 2 cut(s) | 193, 393 |
| MunI | CAATTG | 1 cut(s) | 449 |
| MvaI | CCWGG | 2 cut(s) | 193, 393 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 233, 377 |
| NdeII | GATC | 1 cut(s) | 349 |
| NlaIII | CATG | 3 cut(s) | 64, 170, 430 |
| OliI | CACNNNNGTG | 1 cut(s) | 161 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 14 |
| PfoI | TCCNGGA | 1 cut(s) | 391 |
| PkrI | GCNGC | 2 cut(s) | 115, 208 |
| PleI | GAGTC | 1 cut(s) | 289 |
| PpsI | GAGTC | 1 cut(s) | 289 |
| Psp6I | CCWGG | 2 cut(s) | 191, 391 |
| PspFI | CCCAGC | 1 cut(s) | 323 |
| PspGI | CCWGG | 2 cut(s) | 191, 391 |
| PvuII | CAGCTG | 1 cut(s) | 209 |
| RseI | CAYNNNNRTG | 2 cut(s) | 122, 161 |
| SatI | GCNGC | 2 cut(s) | 114, 207 |
| Sau3AI | GATC | 1 cut(s) | 349 |
| SchI | GAGTC | 1 cut(s) | 290 |
| ScrFI | CCNGG | 2 cut(s) | 193, 393 |
| SetI | ASST | 8 cut(s) | 140, 211, 220, 321, 357, 382, 418, 464 |
| SfaNI | GCATC | 1 cut(s) | 236 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 122, 161 |
| Sse9I | AATT | 3 cut(s) | 37, 364, 449 |
| SsiI | CCGC | 2 cut(s) | 114, 236 |
| StyD4I | CCNGG | 2 cut(s) | 191, 391 |
| StyI | CCWWGG | 1 cut(s) | 49 |
| TaaI | ACNGT | 1 cut(s) | 28 |
| TaiI | ACGT | 1 cut(s) | 321 |
| TaqI | TCGA | 2 cut(s) | 35, 279 |
| TasI | AATT | 3 cut(s) | 37, 364, 449 |
| TauI | GCSGC | 1 cut(s) | 116 |
| TscAI | CASTG | 1 cut(s) | 89 |
| TseI | GCWGC | 1 cut(s) | 206 |
| TspDTI | ATGAA | 1 cut(s) | 345 |
| TspGWI | ACGGA | 1 cut(s) | 21 |
| TspRI | CASTG | 1 cut(s) | 89 |
| XapI | RAATTY | 2 cut(s) | 37, 364 |
| XmiI | GTMKAC | 1 cut(s) | 301 |