Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0009972

Physical Location & Seq

Genomic Coordinates Reverse (-)

41921813 .. 41930019

Gene Structure 8207 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG196300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1779 bp

ATGGCCAAGGAGGAGCAGCTAGCGGAGCTTCTGGAAACCCTAGGCGACTTCACAAGCAAAGAGAACTGGGACAAGTTCTTCACAATCCGAGGCACCGAAGACGCCTTCGAGTGGTACGCCGAGTGGTCCGAGCTCCGAGACCCTTTACTCTCCCACCTCCCGCCAAAACCCCAAATCCTCGTCCCCGGCTGCGGCAGCTCCCGCCTCTCCGAGCATCTCTACGACGCCGGCTTCACCTCCATCACCAACATCGACTTCTCCAAGGTCGCCATTTCCGATTGCCTCCGCCGCAATGTGCGCCTCAGGCCCCTTATGCGGTGGCGCGTCATGGACATGACCGCCATGCAGCTTGAGGATGAGGCATTTGATGCTGTGGTTGACAAAGGTGGATTGGATGCGTTAATGGAGCCGGAGCTTGGCCCTAAGTTAGGGGATCAATATTTAGCAGAGGTTAGAAGAGTTTTGAAGTCCGGAGGGAAATTTATTTGCCTTACATTGGCGGAGTCGCATGTTCTGGCTCTGCTTTTCCCGAAGTTCCGGTTTGGGTGGAAAATTAGTGTCCATGCTATACCTCACAAACCGTCTAGTAAGCCAAGTCTTCAAGCGTTTATGGTGGTTGCTGTAAAAGAGATGTCCACTGAGTTGCAGGAGATCACATCCTCATTCAATAAGTCTTCCCTTGCTTGTAGAGGAAGTCAGGGTCGTGGACTTCTTGAAGCTGTTGAAAATGAGAATCAAATTCGTAGAGAATACTCCTCTGCTTCAGATATACAGCACTCTCTTGAAGACTTAAAACTTGGAGCTAGAGGAGATTTAACTAAGCTTCGCCCGGGTCGTTGTTTTCAGCTTACTTTATGTGGGGGCTCCCACTTCAGTTGCAGAGCTGTAGTTCTTGATGCTAAGGAAAACTCTGGCCCCTTTGTATATCACTGTGGGGTTTTTATTGTGCCTAAGACTCGGGCTCATGAATGGCTGTTCTCTTCTGAAGAAGGACAATGGATGGTAGTAGAAAGCTCAAAGGCAGCTCGTCTAGTAATGGTTTTATTAGATGCCAGCCATGTTAGTGCGAGCATGGATGATATTCAGAAGGAATTATCTCCTTTGGTTAAACAATTGGCGCCTGGAAAAGATGACAATGGAGCTCAAATTCCATTCATGATGGCAAGTGATGGGATCAAACAACGAGATATTGTGCACCAGGTCACATCCTCAATAACTGGACCAATAATAGTTGAGGACGTGATTTATGAAACTGATAATGGTGATATCAGTCGCATTCTACCATCCAGAGATTTGACATTTCGTCGCCTTGTCTTCCAAAGAAGTGAGGGTCTGGTTCAGTCTGAAGCTCTTCTGTCAGAGGAAGGATTGAAATATAAAATTGTTGGTCAGAGTGAGAAGAAAAAAACAAATTCATCTTCCAAATCTAAAAAAAGAGGAATCCAGAGACGAAGTGATGAGACGAGCCACCAGCTGAAGGTGTATCATGGGTATTTGGCTAGTTCTTATCATACAGGGATTATTTCTGGATTAATGTTGATTTCATCTTATTTGGAAAGCATGGTGTCAACACAAAAATCAGTCAAAACAGTTGTTATTGGTCTTGGAGCAGGTTTACTTCCTATGTTCCTTCATAAATGTATGCCCTTTATGCACATTGAGGTAATTTTAGACTTGATCCAAATCTCCCAGAAAAAAGAAGAAAGACTCTCCCATAATTTTTTTAAATTCTTTTTACAAAACTTCAATCATGAATGTACTTTAGCACAAATGCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltransf_11 Methyltransf_25 Spermine_synth

Protein Analysis

592

Amino Acids

66.5

Weight (kDa)

6.82

Isoelectric Point (pI)

47.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Methyltransf_25	PF13649	59 - 159	2.3e-11	Methyltransferase domain
Methyltransf_31	PF13847	60 - 167	6.2e-08	Methyltransferase domain
Methyltransf_11	PF08241	62 - 163	1.8e-13	Methyltransferase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009972)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31740 AT2G31740
fragaria_vesca	FvH4_4g13510
malus_domestica	MD01G1010300.v1.1 MD04G1013700.v1.1
prunus_persica	Prupe.1G159900_v2.0.a1 Prupe.1G159900_v2.0.a1 Prupe.1G159900_v2.0.a1
pyrus_communis	pycom04g01070
rosa_chinensis	RchiOBHm_Chr4g0414141
rosa_laevigata	RLG00000008167
rosa_multiflora	Rmu_sc0000808.1_g000057 Rmu_sc0008865.1_g000003
rosa_roxburghii	Rroxscaffold_5G00358100
rosa_rugosa	Rorug04G0126400 Rorug04G0126500
rosa_samantha	Rh4AG184600 Rh4BG184000 Rh4CG196300 Rh4DG179900
rosa_wichuraiana	Rw4G015720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1601
AccB1I	GGYRCC	2 cut(s)	92, 1117
AccII	CGCG	1 cut(s)	324
AccIII	TCCGGA	1 cut(s)	470
AciI	CCGC	9 cut(s)	23, 161, 192, 202, 286, 289, 316, 339, 500
AclWI	GGATC	3 cut(s)	441, 1181, 1672
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	5 cut(s)	479, 738, 1146, 1411, 1727
AcuI	CTGAAG	5 cut(s)	747, 856, 1005, 1365, 1496
AcyI	GRCGYC	3 cut(s)	102, 225, 1118
AfaI	GTAC	2 cut(s)	116, 1759
AfiI	CCNNNNNNNGG	7 cut(s)	111, 191, 315, 416, 428, 496, 1477
AgsI	TTSAA	8 cut(s)	466, 602, 667, 716, 725, 785, 1372, 1747
AhdI	GACNNNNNGTC	1 cut(s)	1302
AjiI	CACGTC	1 cut(s)	1240
AjnI	CCWGG	2 cut(s)	1120, 1197
AjuI	GAANNNNNNNTTGG	2 cut(s)	239, 271
Alw21I	GWGCWC	3 cut(s)	135, 1144, 1197
Alw26I	GTCTC	3 cut(s)	132, 1441, 1454
Alw44I	GTGCAC	1 cut(s)	1193
AlwI	GGATC	3 cut(s)	441, 1181, 1672
Ama87I	CYCGRG	2 cut(s)	829, 957
Aor13HI	TCCGGA	1 cut(s)	470
AoxI	GGCC	4 cut(s)	3, 305, 418, 913
ApaLI	GTGCAC	1 cut(s)	1193
ApeKI	GCWGC	5 cut(s)	16, 189, 195, 346, 1022
ApoI	RAATTY	5 cut(s)	479, 738, 1146, 1411, 1727
AseI	ATTAAT	1 cut(s)	1532
Asp700I	GAANNNNTTC	1 cut(s)	1350
AspA2I	CCTAGG	1 cut(s)	40
AspLEI	GCGC	3 cut(s)	300, 324, 1120
AspS9I	GGNCC	5 cut(s)	126, 306, 419, 914, 1220
AsuC2I	CCSGG	3 cut(s)	186, 830, 831
AsuHPI	GGTGA	3 cut(s)	226, 235, 1274
AsuNHI	GCTAGC	1 cut(s)	19
AvaI	CYCGRG	2 cut(s)	829, 957
AvaII	GGWCC	2 cut(s)	126, 1220
AvrII	CCTAGG	1 cut(s)	40
AxyI	CCTNAGG	1 cut(s)	302
BaeGI	GKGCMC	1 cut(s)	1197
BalI	TGGCCA	1 cut(s)	5
BanI	GGYRCC	2 cut(s)	92, 1117
BanII	GRGCYC	4 cut(s)	135, 866, 964, 1144
BbsI	GAAGAC	5 cut(s)	105, 590, 666, 792, 1306
Bbv12I	GWGCWC	3 cut(s)	135, 1144, 1197
BbvI	GCAGC	5 cut(s)	28, 176, 207, 358, 1034
BccI	CCATC	5 cut(s)	248, 994, 1153, 1163, 1291
BciT130I	CCWGG	2 cut(s)	1122, 1199
BcnI	CCSGG	3 cut(s)	186, 830, 831
BcoDI	GTCTC	3 cut(s)	132, 1441, 1454
BfaI	CTAG	6 cut(s)	20, 41, 585, 804, 1031, 1500
BfmI	CTRYAG	1 cut(s)	885
BfoI	RGCGCY	1 cut(s)	1121
BfuAI	ACCTGC	1 cut(s)	1601
BisI	GCNGC	7 cut(s)	17, 190, 193, 196, 289, 347, 1023
BlnI	CCTAGG	1 cut(s)	40
BlsI	GCNGC	7 cut(s)	18, 191, 194, 197, 290, 348, 1024
Bme1390I	CCNGG	5 cut(s)	186, 830, 831, 1122, 1199
Bme18I	GGWCC	2 cut(s)	126, 1220
BmeRI	GACNNNNNGTC	1 cut(s)	1302
BmeT110I	CYCGRG	2 cut(s)	829, 957
BmgBI	CACGTC	1 cut(s)	1240
BmgT120I	GGNCC	5 cut(s)	126, 306, 419, 914, 1220
BmiI	GGNNCC	6 cut(s)	94, 308, 408, 865, 916, 1119
BmrFI	CCNGG	5 cut(s)	186, 830, 831, 1122, 1199
BmrI	ACTGGG	1 cut(s)	76
BmsI	GCATC	5 cut(s)	223, 358, 385, 886, 1039
BmtI	GCTAGC	1 cut(s)	23
BmuI	ACTGGG	1 cut(s)	76
BpiI	GAAGAC	5 cut(s)	105, 590, 666, 792, 1306
Bpu10I	CCTNAGC	1 cut(s)	900
BpuEI	CTTGAG	1 cut(s)	371
BpuMI	CCSGG	3 cut(s)	186, 830, 831
BsaBI	GATNNNNATC	1 cut(s)	1682
BsaHI	GRCGYC	3 cut(s)	102, 225, 1118
BsaI	GGTCTC	1 cut(s)	132
BsaJI	CCNNGG	6 cut(s)	6, 40, 88, 184, 261, 829
BsaWI	WCCGGW	2 cut(s)	470, 537
Bsc4I	CCNNNNNNNGG	7 cut(s)	111, 191, 315, 416, 428, 496, 1477
Bse118I	RCCGGY	1 cut(s)	227
Bse1I	ACTGG	2 cut(s)	71, 1222
Bse21I	CCTNAGG	1 cut(s)	302
Bse3DI	GCAATG	1 cut(s)	298
Bse8I	GATNNNNATC	1 cut(s)	1682
BseAI	TCCGGA	1 cut(s)	470
BseBI	CCWGG	2 cut(s)	1122, 1199
BseDI	CCNNGG	6 cut(s)	6, 40, 88, 184, 261, 829
BseGI	GGATG	7 cut(s)	361, 400, 656, 1005, 1081, 1205, 1283
BseJI	GATNNNNATC	1 cut(s)	1682
BseLI	CCNNNNNNNGG	7 cut(s)	111, 191, 315, 416, 428, 496, 1477
BseMI	GCAATG	1 cut(s)	298
BseMII	CTCAG	2 cut(s)	316, 630
BseNI	ACTGG	2 cut(s)	71, 1222
BseRI	GAGGAG	3 cut(s)	26, 745, 822
BseSI	GKGCMC	1 cut(s)	1197
BseXI	GCAGC	5 cut(s)	28, 176, 207, 358, 1034
Bsh1236I	CGCG	1 cut(s)	324
BshFI	GGCC	4 cut(s)	5, 307, 420, 915
BshNI	GGYRCC	2 cut(s)	92, 1117
BsiHKAI	GWGCWC	3 cut(s)	135, 1144, 1197
BsiHKCI	CYCGRG	2 cut(s)	829, 957
BsiSI	CCGG	6 cut(s)	186, 228, 410, 471, 538, 830
BslFI	GGGAC	2 cut(s)	83, 167
BslI	CCNNNNNNNGG	7 cut(s)	111, 191, 315, 416, 428, 496, 1477
BsmAI	GTCTC	3 cut(s)	132, 1441, 1454
BsmBI	CGTCTC	2 cut(s)	1441, 1454
BsmFI	GGGAC	2 cut(s)	83, 167
BsmI	GAATGC	1 cut(s)	1275
BsnI	GGCC	4 cut(s)	5, 307, 420, 915
Bso31I	GGTCTC	1 cut(s)	132
BsoBI	CYCGRG	2 cut(s)	829, 957
Bsp1286I	GDGCHC	5 cut(s)	135, 866, 964, 1144, 1197
Bsp13I	TCCGGA	1 cut(s)	470
Bsp143I	GATC	4 cut(s)	433, 651, 1173, 1677
BspACI	CCGC	9 cut(s)	23, 161, 192, 202, 286, 289, 316, 339, 500
BspANI	GGCC	4 cut(s)	5, 307, 420, 915
BspCNI	CTCAG	2 cut(s)	315, 631
BspEI	TCCGGA	1 cut(s)	470
BspFNI	CGCG	1 cut(s)	324
BspHI	TCATGA	3 cut(s)	964, 1155, 1750
BspLI	GGNNCC	6 cut(s)	94, 308, 408, 865, 916, 1119
BspMI	ACCTGC	1 cut(s)	1601
BspOI	GCTAGC	1 cut(s)	23
BspPI	GGATC	3 cut(s)	441, 1181, 1672
BspQI	GCTCTTC	1 cut(s)	1356
BspT107I	GGYRCC	2 cut(s)	92, 1117
BspTNI	GGTCTC	1 cut(s)	132
BsrDI	GCAATG	1 cut(s)	298
BsrFI	RCCGGY	1 cut(s)	227
BsrI	ACTGG	2 cut(s)	71, 1222
BssAI	RCCGGY	1 cut(s)	227
BssECI	CCNNGG	6 cut(s)	6, 40, 88, 184, 261, 829
BssMI	GATC	4 cut(s)	433, 651, 1173, 1677
BssNI	GRCGYC	3 cut(s)	102, 225, 1118
BssT1I	CCWWGG	3 cut(s)	6, 40, 261
Bst2UI	CCWGG	2 cut(s)	1122, 1199
Bst4CI	ACNGT	3 cut(s)	582, 932, 1591
Bst6I	CTCTTC	3 cut(s)	451, 985, 1356
BstACI	GRCGYC	3 cut(s)	102, 225, 1118
BstAPI	GCANNNNNTGC	1 cut(s)	368
BstC8I	GCNNGC	4 cut(s)	21, 229, 1054, 1069
BstDEI	CTNAG	6 cut(s)	302, 423, 639, 819, 900, 951
BstENI	CCTNNNNNAGG	1 cut(s)	426
BstF5I	GGATG	7 cut(s)	361, 400, 656, 1005, 1081, 1205, 1283
BstFNI	CGCG	1 cut(s)	324
BstH2I	RGCGCY	1 cut(s)	1121
BstHHI	GCGC	3 cut(s)	300, 324, 1120
BstKTI	GATC	4 cut(s)	436, 654, 1176, 1680
BstMAI	GTCTC	3 cut(s)	132, 1441, 1454
BstMBI	GATC	4 cut(s)	433, 651, 1173, 1677
BstMWI	GCNNNNNNNGC	9 cut(s)	25, 195, 201, 288, 297, 304, 313, 368, 1651
BstNI	CCWGG	2 cut(s)	1122, 1199
BstNSI	RCATGY	1 cut(s)	512
BstSCI	CCNGG	5 cut(s)	184, 828, 829, 1120, 1197
BstSFI	CTRYAG	1 cut(s)	885
BstSLI	GKGCMC	1 cut(s)	1197
BstUI	CGCG	1 cut(s)	324
BstV1I	GCAGC	5 cut(s)	28, 176, 207, 358, 1034
BstV2I	GAAGAC	5 cut(s)	105, 590, 666, 792, 1306
Bsu36I	CCTNAGG	1 cut(s)	302
BsuRI	GGCC	4 cut(s)	5, 307, 420, 915
BtrI	CACGTC	1 cut(s)	1240
BtsCI	GGATG	7 cut(s)	361, 400, 656, 1005, 1081, 1205, 1283
BtsIMutI	CAGTG	2 cut(s)	636, 928
BveI	ACCTGC	1 cut(s)	1601
Cac8I	GCNNGC	4 cut(s)	21, 229, 1054, 1069
CciI	TCATGA	3 cut(s)	964, 1155, 1750
CfoI	GCGC	3 cut(s)	300, 324, 1120
Cfr10I	RCCGGY	1 cut(s)	227
Cfr13I	GGNCC	5 cut(s)	126, 306, 419, 914, 1220
Cfr9I	CCCGGG	1 cut(s)	829
CseI	GACGC	3 cut(s)	110, 233, 313
CsiI	ACCWGGT	1 cut(s)	1197
Csp6I	GTAC	2 cut(s)	115, 1758
CspCI	CAANNNNNGTGG	2 cut(s)	857, 892
CviQI	GTAC	2 cut(s)	115, 1758
DdeI	CTNAG	6 cut(s)	302, 423, 639, 819, 900, 951
DinI	GGCGCC	1 cut(s)	1119
DpnI	GATC	4 cut(s)	435, 653, 1175, 1679
DpnII	GATC	4 cut(s)	433, 651, 1173, 1677
DraI	TTTAAA	1 cut(s)	1726
DriI	GACNNNNNGTC	1 cut(s)	1302
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	3 cut(s)	451, 985, 1356
Eam1105I	GACNNNNNGTC	1 cut(s)	1302
EarI	CTCTTC	3 cut(s)	451, 985, 1356
EciI	GGCGGA	2 cut(s)	275, 515
Ecl136II	GAGCTC	2 cut(s)	133, 1142
Eco130I	CCWWGG	3 cut(s)	6, 40, 261
Eco24I	GRGCYC	4 cut(s)	135, 866, 964, 1144
Eco31I	GGTCTC	1 cut(s)	132
Eco32I	GATATC	1 cut(s)	1267
Eco47I	GGWCC	2 cut(s)	126, 1220
Eco53kI	GAGCTC	2 cut(s)	133, 1142
Eco57I	CTGAAG	5 cut(s)	747, 856, 1005, 1365, 1496
Eco81I	CCTNAGG	1 cut(s)	302
Eco88I	CYCGRG	2 cut(s)	829, 957
EcoICRI	GAGCTC	2 cut(s)	133, 1142
EcoNI	CCTNNNNNAGG	1 cut(s)	426
EcoO109I	RGGNCCY	1 cut(s)	306
EcoRII	CCWGG	2 cut(s)	1120, 1197
EcoRV	GATATC	1 cut(s)	1267
EcoT14I	CCWWGG	3 cut(s)	6, 40, 261
EcoT38I	GRGCYC	4 cut(s)	135, 866, 964, 1144
EgeI	GGCGCC	1 cut(s)	1119
EheI	GGCGCC	1 cut(s)	1119
ErhI	CCWWGG	3 cut(s)	6, 40, 261
Esp3I	CGTCTC	2 cut(s)	1441, 1454
FaqI	GGGAC	2 cut(s)	83, 167
FauI	CCCGC	2 cut(s)	168, 209
Fnu4HI	GCNGC	7 cut(s)	17, 190, 193, 196, 289, 347, 1023
FokI	GGATG	7 cut(s)	368, 407, 643, 1012, 1088, 1192, 1270
FriOI	GRGCYC	4 cut(s)	135, 866, 964, 1144
Fsp4HI	GCNGC	7 cut(s)	17, 190, 193, 196, 289, 347, 1023
FspBI	CTAG	6 cut(s)	20, 41, 585, 804, 1031, 1500
GlaI	GCGC	3 cut(s)	299, 323, 1119
GluI	GCNGC	7 cut(s)	17, 190, 193, 196, 289, 347, 1023
HaeII	RGCGCY	1 cut(s)	1121
HaeIII	GGCC	4 cut(s)	5, 307, 420, 915
HapII	CCGG	6 cut(s)	186, 228, 410, 471, 538, 830
HgaI	GACGC	3 cut(s)	110, 233, 313
HhaI	GCGC	3 cut(s)	300, 324, 1120
Hin1I	GRCGYC	3 cut(s)	102, 225, 1118
Hin6I	GCGC	3 cut(s)	298, 322, 1118
HinP1I	GCGC	3 cut(s)	298, 322, 1118
HincII	GTYRAC	2 cut(s)	379, 1569
HindII	GTYRAC	2 cut(s)	379, 1569
HindIII	AAGCTT	1 cut(s)	821
HinfI	GANTC	5 cut(s)	503, 733, 955, 1440, 1707
HpaII	CCGG	6 cut(s)	186, 228, 410, 471, 538, 830
HphI	GGTGA	3 cut(s)	226, 235, 1274
Hpy166II	GTNNAC	6 cut(s)	379, 636, 707, 1195, 1569, 1616
Hpy8I	GTNNAC	6 cut(s)	379, 636, 707, 1195, 1569, 1616
Hpy99I	CGWCG	2 cut(s)	227, 1308
HpyAV	CCTTC	6 cut(s)	115, 983, 1081, 1358, 1471, 1640
HpyCH4III	ACNGT	3 cut(s)	582, 932, 1591
HpyCH4IV	ACGT	1 cut(s)	1239
HpyCH4V	TGCA	6 cut(s)	346, 646, 879, 1195, 1654, 1774
HpyF10VI	GCNNNNNNNGC	9 cut(s)	25, 195, 201, 288, 297, 304, 313, 368, 1651
HpyF3I	CTNAG	6 cut(s)	302, 423, 639, 819, 900, 951
HpySE526I	ACGT	1 cut(s)	1239
Hsp92I	GRCGYC	3 cut(s)	102, 225, 1118
HspAI	GCGC	3 cut(s)	298, 322, 1118
KasI	GGCGCC	1 cut(s)	1117
Kpn2I	TCCGGA	1 cut(s)	470
KroI	GCCGGC	1 cut(s)	227
KroNI	GCCGGC	1 cut(s)	229
Kzo9I	GATC	4 cut(s)	433, 651, 1173, 1677
LguI	GCTCTTC	1 cut(s)	1356
Lsp1109I	GCAGC	5 cut(s)	28, 176, 207, 358, 1034
LweI	GCATC	5 cut(s)	223, 358, 385, 886, 1039
MabI	ACCWGGT	1 cut(s)	1197
MaeI	CTAG	6 cut(s)	20, 41, 585, 804, 1031, 1500
MaeII	ACGT	1 cut(s)	1239
MaeIII	GTNAC	1 cut(s)	1201
MalI	GATC	4 cut(s)	435, 653, 1175, 1679
MboI	GATC	4 cut(s)	433, 651, 1173, 1677
MfeI	CAATTG	1 cut(s)	1112
MhlI	GDGCHC	5 cut(s)	135, 866, 964, 1144, 1197
MlsI	TGGCCA	1 cut(s)	5
MluNI	TGGCCA	1 cut(s)	5
Mly113I	GGCGCC	1 cut(s)	1118
MlyI	GAGTC	3 cut(s)	512, 949, 1701
Mox20I	TGGCCA	1 cut(s)	5
MroI	TCCGGA	1 cut(s)	470
MroNI	GCCGGC	1 cut(s)	227
MroXI	GAANNNNTTC	1 cut(s)	1350
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	6 cut(s)	401, 791, 815, 1107, 1532, 1725
MslI	CAYNNNNRTG	2 cut(s)	332, 1062
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	1 cut(s)	1474
MspI	CCGG	6 cut(s)	186, 228, 410, 471, 538, 830
MspR9I	CCNGG	5 cut(s)	186, 830, 831, 1122, 1199
MunI	CAATTG	1 cut(s)	1112
Mva1269I	GAATGC	1 cut(s)	1275
MvaI	CCWGG	2 cut(s)	1122, 1199
MvnI	CGCG	1 cut(s)	324
MwoI	GCNNNNNNNGC	9 cut(s)	25, 195, 201, 288, 297, 304, 313, 368, 1651
NaeI	GCCGGC	1 cut(s)	229
NarI	GGCGCC	1 cut(s)	1118
NciI	CCSGG	3 cut(s)	186, 830, 831
NdeII	GATC	4 cut(s)	433, 651, 1173, 1677
NgoMIV	GCCGGC	1 cut(s)	227
NheI	GCTAGC	1 cut(s)	19
NlaIV	GGNNCC	6 cut(s)	94, 308, 408, 865, 916, 1119
NmeAIII	GCCGAG	1 cut(s)	145
NmuCI	GTSAC	1 cut(s)	1201
NspI	RCATGY	1 cut(s)	512
PagI	TCATGA	3 cut(s)	964, 1155, 1750
PciSI	GCTCTTC	1 cut(s)	1356
PcsI	WCGNNNNNNNCGW	2 cut(s)	273, 832
PctI	GAATGC	1 cut(s)	1275
PdiI	GCCGGC	1 cut(s)	229
PdmI	GAANNNNTTC	1 cut(s)	1350
PfeI	GAWTC	2 cut(s)	733, 1440
PkrI	GCNGC	7 cut(s)	18, 191, 194, 197, 290, 348, 1024
PleI	GAGTC	3 cut(s)	511, 949, 1701
PluTI	GGCGCC	1 cut(s)	1121
PpsI	GAGTC	3 cut(s)	511, 949, 1701
PshBI	ATTAAT	1 cut(s)	1532
Psp124BI	GAGCTC	2 cut(s)	135, 1144
Psp6I	CCWGG	2 cut(s)	1120, 1197
PspGI	CCWGG	2 cut(s)	1120, 1197
PspN4I	GGNNCC	6 cut(s)	94, 308, 408, 865, 916, 1119
PspPI	GGNCC	5 cut(s)	126, 306, 419, 914, 1220
PvuII	CAGCTG	1 cut(s)	1474
RsaI	GTAC	2 cut(s)	116, 1759
RsaNI	GTAC	2 cut(s)	115, 1758
RseI	CAYNNNNRTG	2 cut(s)	332, 1062
SacI	GAGCTC	2 cut(s)	135, 1144
SapI	GCTCTTC	1 cut(s)	1356
SaqAI	TTAA	6 cut(s)	401, 791, 815, 1107, 1532, 1725
SatI	GCNGC	7 cut(s)	17, 190, 193, 196, 289, 347, 1023
Sau3AI	GATC	4 cut(s)	433, 651, 1173, 1677
Sau96I	GGNCC	5 cut(s)	126, 306, 419, 914, 1220
SchI	GAGTC	3 cut(s)	512, 949, 1701
ScrFI	CCNGG	5 cut(s)	186, 830, 831, 1122, 1199
SduI	GDGCHC	5 cut(s)	135, 866, 964, 1144, 1197
SexAI	ACCWGGT	1 cut(s)	1197
SfaNI	GCATC	5 cut(s)	223, 358, 385, 886, 1039
SfcI	CTRYAG	1 cut(s)	885
SfoI	GGCGCC	1 cut(s)	1119
SinI	GGWCC	2 cut(s)	126, 1220
SmaI	CCCGGG	1 cut(s)	831
SmiMI	CAYNNNNRTG	2 cut(s)	332, 1062
SmlI	CTYRAG	1 cut(s)	350
SmoI	CTYRAG	1 cut(s)	350
SsiI	CCGC	9 cut(s)	23, 161, 192, 202, 286, 289, 316, 339, 500
SspDI	GGCGCC	1 cut(s)	1117
SspI	AATATT	1 cut(s)	440
SspMI	CTAG	6 cut(s)	20, 41, 585, 804, 1031, 1500
SstI	GAGCTC	2 cut(s)	135, 1144
StyD4I	CCNGG	5 cut(s)	184, 828, 829, 1120, 1197
StyI	CCWWGG	3 cut(s)	6, 40, 261
TaaI	ACNGT	3 cut(s)	582, 932, 1591
TaiI	ACGT	1 cut(s)	1242
TaqI	TCGA	2 cut(s)	108, 252
TatI	WGTACW	1 cut(s)	1757
TauI	GCSGC	2 cut(s)	195, 291
TfiI	GAWTC	2 cut(s)	733, 1440
Tru1I	TTAA	6 cut(s)	401, 791, 815, 1107, 1532, 1725
Tru9I	TTAA	6 cut(s)	401, 791, 815, 1107, 1532, 1725
TscAI	CASTG	2 cut(s)	643, 935
TseFI	GTSAC	1 cut(s)	1201
TseI	GCWGC	5 cut(s)	16, 189, 195, 346, 1022
Tsp45I	GTSAC	1 cut(s)	1201
TspDTI	ATGAA	7 cut(s)	981, 1144, 1263, 1404, 1533, 1622, 1767
TspMI	CCCGGG	1 cut(s)	829
TspRI	CASTG	2 cut(s)	643, 935
VneI	GTGCAC	1 cut(s)	1193
VpaK11BI	GGWCC	2 cut(s)	126, 1220
VspI	ATTAAT	1 cut(s)	1532
XagI	CCTNNNNNAGG	1 cut(s)	426
XapI	RAATTY	5 cut(s)	479, 738, 1146, 1411, 1727
XceI	RCATGY	1 cut(s)	512
XmaI	CCCGGG	1 cut(s)	829
XmaJI	CCTAGG	1 cut(s)	40
XmnI	GAANNNNTTC	1 cut(s)	1350
XspI	CTAG	6 cut(s)	20, 41, 585, 804, 1031, 1500

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.