Rh4CG447200

Pentatricopeptide repeat-containing protein At1g05670

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0005286
Physical Location & Seq
Forward (+)
68213545 .. 68215788
2244 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG447200.1

Sequence Viewer

Length: 2244 bp
ATGAAGAGGTGCACCATCTTCTCAGACTATTGTTGTCAGATCTTCACTCATCGTCCCCGCTTAAATCATGGTCTAAATGGTTCGGTGTTGTTCTTTAGAAGTTTAAGCCATATGCTCTCATCTGGCTCGACAGATATGAGGCCTTTTCCTGATTATTCCCCCAAGAGACCGACCATCAAGGATGCCGAACTTGTCCATGGCATCTCCACCACAATAAAGTTGCGCAGCTCTGAGCCCTTGCGCCGGATTCTGAAGCCTTATGAATCAAAGTTCAGGTCTGACCATCTAATTTGGGTTCTCATGAAGATTAAGAGTGAGTATAAGCTGGTTTTGGATTTGTTTGATTGGGCATGCTTACGAAGGGATCCAACACTAGAAGCTCGTTGCATTGTTGTGCACATTGCCGCAGCATCAAATGATCTTAAAATAGCTCATGGGCTTATCCATGATTTTTGGGCAAAACCCAAATTAGATGTCAGTCTTTCATGCACTCACTTTGCTGACCGGTTGATATACACTTACAAGGACTGGGGTTCAGACCCCCATGTGTTCGATGTTTTCTTCCAAGTCCTTGTTGAACTTGGGATGCTCAAAGAAGCAAGAAAACATTTTGAGAAGCTGTTGAGTTATGGGTTGGTTATCTCTGTTGATTCCTGTAATTTCTTTCTTTCTCGTTTATCTAGTACATCTGATGGAATTGAGACGGCAGTAAAGTTTTTCAATGAATATCTTGAAGTGGGTGTTCATTGGAACACGTCGTCATATAATATTATCATTCATTCTCTCTGTCGATTAGGGAAGATAAAAGAAGCCCACCATTTACTACTGCAAATGGAGTTGAAGGGTTGTTTGCCTGATGTTGTAAGTTATAGTACTTTAATCAGCCAATATTGTTATGTTGGAGAACTACAGAATGTGTTGAAGCTCATAGAAGAGATGAAAAATAAAGGATTGAAGCCAAATTCCTATACCTATAACAGCATATTACTTCTTCTCTGCAAGACTGGAAAACTATCTGAAGCAGAAATGATATTGAGGGAAATGATGGTTGTGGGAGTACGTCCTGATAATGTCATCTACACGACTCTAATTGATGGTTTCTGTAAGTTAGGGAATGTTCCAGCTGCTTGGAGGCTGTTTGATGAAATGCGGGTTAGGAAAGTTATCCCAGATTTTATAACTTATACTGCTATTATTCATGGATTCTGTCGAACAGGGAAGATGATGGAAGCAGATAAGCTCTTCCATGAAATGGTTAGTAAAGGGTTGGAACCAGATGAAGTTACTTATACAGCACTGATTGATGGTTATTGCAAAGCAGGTCAGATGAAAGAGGCTTTTTCTCTTCACAACCAGATGGTTAGTATGGGGCTTAGCCCAAATGTTGTCACTTATACTGCACTGGCTGATGGTCTTTGTAAACGAGGGGAAGTAGATGTAGCAAACGAACTTCTTCATGAGGTGTGTAGGAAAGGCCTTCAACTTAATGTCTGCACTTACAACTCAATCGTTAATGGTCTTTGTAAAACAGGAAATATAGGGCAAGCAGAAGAATTGATGGAACAAATGGAGGTTGCAGGGCCCCATCCTGATACTATTACTTATACTACTCTCATGGATGCATACTGTAAGACAGGGGAGATGGCTAAGGCTCACAAGGTCCTGCGTGAGATGCTGGATAAAGGACTTGAACCTACAGTTGTTACATTTAATGTACTGATGAATGGCTTTTGTATGTCAGAAATGCTAGAAGATGGTGAGAGGTTACTTAAATGGATGTTGGAGAAGAATATTGTGCCTAATGCCACCACATACAATTCTCTAATGAAGCAGTACTGCATCAGAAATAACATGCGAGCTACAACTGAGATGTTCAAAGGCATGTCTGCTAGTGGAGTGATGCCCGATAGCAACACATATAACATTTTAATAAAAGGGCATTGTAAAGCACGGAATATGAAGGAGGCATGGTTTTTGCACAAAGAAATGGCAGGGAAGGGATTTATTCTTACAGCTAGTTCTTACATTGCACTTATTAATGGTTTTTTTAAGAGGAAGAAGTTTGTGGAGGCAAGGGAACTCTTTGAAGAGATGAGAAGACAAGGTTTGGTAGCAAATAGAGAAATATACAACATCTTTGTTGATATGAACTATGAAGAAGGGAACATAGACATTACTCTTGAGCTTTGTGACGAAGTTATAGAGAATTGTCTTGTTGGTGAGTCCAAAAATGAAGACACATAG

Protein Analysis

747

Amino Acids

85.22

Weight (kDa)

6.9

Isoelectric Point (pI)

31.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_1 PF12854 247 - 279 8.9e-07 PPR repeat
PPR_2 PF13041 251 - 298 6.9e-14 PPR repeat family
PPR PF01535 254 - 283 6.7e-06 PPR repeat
PPR_3 PF13812 274 - 330 9.2e-12 Pentatricopeptide repeat domain
PPR_1 PF12854 281 - 314 3.3e-07 PPR repeat
PPR_2 PF13041 285 - 334 2.1e-15 PPR repeat family
TPR_24 PF23276 288 - 382 9.9e-06 Fungal tetratrico peptide repeats
PPR_long PF17177 304 - 444 8.7e-12 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 316 - 348 2.6e-08 PPR repeat
PPR_2 PF13041 324 - 369 2.8e-11 PPR repeat family
PPR_3 PF13812 344 - 400 2e-08 Pentatricopeptide repeat domain
PPR_1 PF12854 352 - 384 1.2e-11 PPR repeat
PPR_2 PF13041 355 - 404 1.6e-17 PPR repeat family
PPR PF01535 358 - 387 1.8e-07 PPR repeat
PPR_1 PF12854 389 - 419 4.2e-10 PPR repeat
PPR_2 PF13041 390 - 439 5.8e-20 PPR repeat family
PPR PF01535 393 - 423 4.9e-09 PPR repeat
PPR_3 PF13812 413 - 468 5.9e-11 Pentatricopeptide repeat domain
TPR_24 PF23276 420 - 519 1.7e-09 Fungal tetratrico peptide repeats
PPR_1 PF12854 421 - 454 3.2e-14 PPR repeat
PPR_2 PF13041 426 - 474 1.2e-19 PPR repeat family
PPR PF01535 428 - 458 2.4e-10 PPR repeat
PPR_long PF17177 443 - 579 5.5e-11 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 456 - 487 1e-09 PPR repeat
PPR_2 PF13041 470 - 509 5.1e-09 PPR repeat family
PPR_1 PF12854 491 - 524 2e-11 PPR repeat
PPR_2 PF13041 496 - 542 4.5e-13 PPR repeat family
PPR_3 PF13812 520 - 576 7.6e-12 Pentatricopeptide repeat domain
PPR_1 PF12854 527 - 558 3e-10 PPR repeat
PPR_2 PF13041 530 - 578 1.1e-18 PPR repeat family
PPR PF01535 533 - 563 3e-08 PPR repeat
PPR_1 PF12854 561 - 593 8.7e-07 PPR repeat
PPR_2 PF13041 565 - 613 1.4e-13 PPR repeat family
PPR_long PF17177 581 - 679 4.7e-06 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 589 - 645 6.2e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 600 - 649 1.9e-13 PPR repeat family
PPR_1 PF12854 632 - 663 1.1e-08 PPR repeat
PPR PF01535 639 - 668 8.7e-07 PPR repeat
PPR_2 PF13041 639 - 684 2e-09 PPR repeat family
PPR_2 PF13041 673 - 715 1.1e-06 PPR repeat family
PPR PF01535 674 - 703 5.2e-06 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1178
Acc16I TGCGCA 1 cut(s) 224
Acc36I ACCTGC 1 cut(s) 1310
AccB7I CCANNNNNTGG 1 cut(s) 1252
AciI CCGC 3 cut(s) 58, 405, 1150
AclWI GGATC 2 cut(s) 359, 372
AcsI RAATTY 1 cut(s) 961
AcuI CTGAAG 2 cut(s) 272, 1038
AfaI GTAC 5 cut(s) 685, 874, 1059, 1716, 1835
AfiI CCNNNNNNNGG 2 cut(s) 243, 1252
AflIII ACRYGT 1 cut(s) 753
AgeI ACCGGT 1 cut(s) 504
AjiI CACGTC 1 cut(s) 756
Alw21I GWGCWC 2 cut(s) 14, 399
Alw26I GTCTC 2 cut(s) 160, 695
Alw44I GTGCAC 2 cut(s) 10, 395
AlwI GGATC 2 cut(s) 359, 372
AoxI GGCC 3 cut(s) 140, 1474, 1580
ApaI GGGCCC 1 cut(s) 1584
ApaLI GTGCAC 2 cut(s) 10, 395
ApeKI GCWGC 3 cut(s) 225, 407, 1124
ApoI RAATTY 1 cut(s) 961
ArsI GACNNNNNNTTYG 4 cut(s) 260, 292, 459, 491
AseI ATTAAT 1 cut(s) 2037
AsiGI ACCGGT 1 cut(s) 504
Asp700I GAANNNNTTC 1 cut(s) 1452
AspLEI GCGC 2 cut(s) 225, 243
AspS9I GGNCC 3 cut(s) 1580, 1581, 1660
AsuHPI GGTGA 2 cut(s) 1769, 2231
AvaII GGWCC 1 cut(s) 1660
BaeGI GKGCMC 3 cut(s) 14, 399, 1584
BamHI GGATCC 1 cut(s) 364
BanII GRGCYC 2 cut(s) 237, 1584
BbsI GAAGAC 1 cut(s) 2104
Bbv12I GWGCWC 2 cut(s) 14, 399
BbvI GCAGC 3 cut(s) 237, 419, 1111
BceAI ACGGC 1 cut(s) 720
BcoDI GTCTC 2 cut(s) 160, 695
BfaI CTAG 5 cut(s) 374, 681, 1748, 1890, 2016
BfmI CTRYAG 2 cut(s) 908, 1695
BfuAI ACCTGC 1 cut(s) 1310
BglII AGATCT 1 cut(s) 39
BisI GCNGC 4 cut(s) 226, 405, 408, 1125
BlpI GCTNAGC 1 cut(s) 1373
BlsI GCNGC 4 cut(s) 227, 406, 409, 1126
BmcAI AGTACT 2 cut(s) 874, 1835
Bme18I GGWCC 1 cut(s) 1660
BmgBI CACGTC 1 cut(s) 756
BmgT120I GGNCC 3 cut(s) 1580, 1581, 1660
BmiI GGNNCC 4 cut(s) 366, 1272, 1582, 1583
BmrI ACTGGG 1 cut(s) 538
BmsI GCATC 8 cut(s) 172, 210, 419, 576, 1609, 1662, 1848, 1890
BmuI ACTGGG 1 cut(s) 538
BpiI GAAGAC 1 cut(s) 2104
Bpu10I CCTNAGC 1 cut(s) 1647
Bpu1102I GCTNAGC 1 cut(s) 1373
BpuEI CTTGAG 1 cut(s) 2201
BsaI GGTCTC 1 cut(s) 160
BsaJI CCNNGG 1 cut(s) 196
BsaWI WCCGGW 1 cut(s) 504
BsaXI ACNNNNNCTCC 2 cut(s) 1955, 1985
Bsc4I CCNNNNNNNGG 2 cut(s) 243, 1252
Bse118I RCCGGY 1 cut(s) 504
Bse1I ACTGG 3 cut(s) 533, 1009, 1407
Bse3DI GCAATG 2 cut(s) 399, 2025
BseDI CCNNGG 1 cut(s) 196
BseGI GGATG 5 cut(s) 187, 591, 1585, 1624, 1782
BseLI CCNNNNNNNGG 2 cut(s) 243, 1252
BseMI GCAATG 2 cut(s) 399, 2025
BseMII CTCAG 3 cut(s) 36, 222, 1857
BseNI ACTGG 3 cut(s) 533, 1009, 1407
BseSI GKGCMC 3 cut(s) 14, 399, 1584
BseXI GCAGC 3 cut(s) 237, 419, 1111
BsgI GTGCAG 2 cut(s) 1383, 1477
BshFI GGCC 3 cut(s) 142, 1476, 1582
BshTI ACCGGT 1 cut(s) 504
BsiHKAI GWGCWC 2 cut(s) 14, 399
BsiSI CCGG 2 cut(s) 244, 505
BslFI GGGAC 1 cut(s) 39
BslI CCNNNNNNNGG 2 cut(s) 243, 1252
BsmAI GTCTC 2 cut(s) 160, 695
BsmBI CGTCTC 1 cut(s) 695
BsmFI GGGAC 1 cut(s) 39
BsnI GGCC 3 cut(s) 142, 1476, 1582
Bso31I GGTCTC 1 cut(s) 160
Bsp120I GGGCCC 1 cut(s) 1580
Bsp1286I GDGCHC 4 cut(s) 14, 237, 399, 1584
Bsp143I GATC 3 cut(s) 39, 364, 418
Bsp1720I GCTNAGC 1 cut(s) 1373
Bsp19I CCATGG 1 cut(s) 196
BspACI CCGC 3 cut(s) 58, 405, 1150
BspANI GGCC 3 cut(s) 142, 1476, 1582
BspCNI CTCAG 3 cut(s) 35, 223, 1858
BspHI TCATGA 2 cut(s) 300, 1456
BspLI GGNNCC 4 cut(s) 366, 1272, 1582, 1583
BspMI ACCTGC 1 cut(s) 1310
BspPI GGATC 2 cut(s) 359, 372
BspQI GCTCTTC 1 cut(s) 1247
BspTNI GGTCTC 1 cut(s) 160
BsrDI GCAATG 2 cut(s) 399, 2025
BsrFI RCCGGY 1 cut(s) 504
BsrI ACTGG 3 cut(s) 533, 1009, 1407
BssAI RCCGGY 1 cut(s) 504
BssECI CCNNGG 1 cut(s) 196
BssMI GATC 3 cut(s) 39, 364, 418
BssT1I CCWWGG 1 cut(s) 196
Bst4CI ACNGT 2 cut(s) 1628, 1699
Bst6I CTCTTC 4 cut(s) 927, 1247, 1350, 2082
BstC8I GCNNGC 3 cut(s) 352, 1545, 1857
BstDEI CTNAG 5 cut(s) 22, 231, 1373, 1647, 1866
BstDSI CCRYGG 1 cut(s) 196
BstF5I GGATG 5 cut(s) 187, 591, 1585, 1624, 1782
BstHHI GCGC 2 cut(s) 225, 243
BstKTI GATC 3 cut(s) 42, 367, 421
BstMAI GTCTC 2 cut(s) 160, 695
BstMBI GATC 3 cut(s) 39, 364, 418
BstMWI GCNNNNNNNGC 1 cut(s) 1672
BstNSI RCATGY 3 cut(s) 354, 1855, 1885
BstSFI CTRYAG 2 cut(s) 908, 1695
BstSLI GKGCMC 3 cut(s) 14, 399, 1584
BstV1I GCAGC 3 cut(s) 237, 419, 1111
BstV2I GAAGAC 1 cut(s) 2104
BstX2I RGATCY 2 cut(s) 39, 364
BstXI CCANNNNNNTGG 1 cut(s) 1128
BstYI RGATCY 2 cut(s) 39, 364
BsuRI GGCC 3 cut(s) 142, 1476, 1582
BtgI CCRYGG 1 cut(s) 196
BtrI CACGTC 1 cut(s) 756
BtsCI GGATG 5 cut(s) 187, 591, 1585, 1624, 1782
BtsIMutI CAGTG 2 cut(s) 1295, 1400
BveI ACCTGC 1 cut(s) 1310
Cac8I GCNNGC 3 cut(s) 352, 1545, 1857
CciI TCATGA 2 cut(s) 300, 1456
CfoI GCGC 2 cut(s) 225, 243
Cfr10I RCCGGY 1 cut(s) 504
Cfr13I GGNCC 3 cut(s) 1580, 1581, 1660
Csp6I GTAC 5 cut(s) 684, 873, 1058, 1715, 1834
CspAI ACCGGT 1 cut(s) 504
CviQI GTAC 5 cut(s) 684, 873, 1058, 1715, 1834
DdeI CTNAG 5 cut(s) 22, 231, 1373, 1647, 1866
DpnI GATC 3 cut(s) 41, 366, 420
DpnII GATC 3 cut(s) 39, 364, 418
Eam1104I CTCTTC 4 cut(s) 927, 1247, 1350, 2082
EarI CTCTTC 4 cut(s) 927, 1247, 1350, 2082
Eco130I CCWWGG 1 cut(s) 196
Eco147I AGGCCT 2 cut(s) 142, 1476
Eco24I GRGCYC 2 cut(s) 237, 1584
Eco31I GGTCTC 1 cut(s) 160
Eco47I GGWCC 1 cut(s) 1660
Eco57I CTGAAG 2 cut(s) 272, 1038
EcoO109I RGGNCCY 3 cut(s) 1580, 1581, 1660
EcoT14I CCWWGG 1 cut(s) 196
EcoT22I ATGCAT 1 cut(s) 1624
EcoT38I GRGCYC 2 cut(s) 237, 1584
ErhI CCWWGG 1 cut(s) 196
Esp3I CGTCTC 1 cut(s) 695
FaqI GGGAC 1 cut(s) 39
FauI CCCGC 2 cut(s) 65, 1143
FauNDI CATATG 1 cut(s) 111
Fnu4HI GCNGC 4 cut(s) 226, 405, 408, 1125
FokI GGATG 5 cut(s) 194, 598, 1572, 1631, 1789
FriOI GRGCYC 2 cut(s) 237, 1584
Fsp4HI GCNGC 4 cut(s) 226, 405, 408, 1125
FspBI CTAG 5 cut(s) 374, 681, 1748, 1890, 2016
FspI TGCGCA 1 cut(s) 224
GlaI GCGC 2 cut(s) 224, 242
GluI GCNGC 4 cut(s) 226, 405, 408, 1125
HaeIII GGCC 3 cut(s) 142, 1476, 1582
HapII CCGG 2 cut(s) 244, 505
HhaI GCGC 2 cut(s) 225, 243
Hin6I GCGC 2 cut(s) 223, 241
HinP1I GCGC 2 cut(s) 223, 241
HinfI GANTC 6 cut(s) 247, 263, 650, 1084, 1203, 2222
HpaII CCGG 2 cut(s) 244, 505
HphI GGTGA 2 cut(s) 1769, 2231
Hpy166II GTNNAC 3 cut(s) 12, 397, 1421
Hpy188III TCNNGA 7 cut(s) 149, 301, 731, 1064, 1457, 1589, 2180
Hpy8I GTNNAC 3 cut(s) 12, 397, 1421
Hpy99I CGWCG 1 cut(s) 760
HpyAV CCTTC 6 cut(s) 354, 835, 1487, 1954, 1990, 2153
HpyCH4III ACNGT 2 cut(s) 1628, 1699
HpyCH4IV ACGT 2 cut(s) 755, 1060
HpyF10VI GCNNNNNNNGC 1 cut(s) 1672
HpyF3I CTNAG 5 cut(s) 22, 231, 1373, 1647, 1866
HpySE526I ACGT 2 cut(s) 755, 1060
HspAI GCGC 2 cut(s) 223, 241
Kzo9I GATC 3 cut(s) 39, 364, 418
LguI GCTCTTC 1 cut(s) 1247
Lsp1109I GCAGC 3 cut(s) 237, 419, 1111
LweI GCATC 8 cut(s) 172, 210, 419, 576, 1609, 1662, 1848, 1890
MaeI CTAG 5 cut(s) 374, 681, 1748, 1890, 2016
MaeII ACGT 2 cut(s) 755, 1060
MaeIII GTNAC 5 cut(s) 1282, 1387, 1702, 1764, 2189
MalI GATC 3 cut(s) 41, 366, 420
MboI GATC 3 cut(s) 39, 364, 418
MflI RGATCY 2 cut(s) 39, 364
MhlI GDGCHC 4 cut(s) 14, 237, 399, 1584
MluCI AATT 9 cut(s) 288, 467, 658, 696, 961, 1089, 1553, 1816, 2206
MlyI GAGTC 2 cut(s) 1078, 2231
MmeI TCCRAC 4 cut(s) 392, 880, 1248, 1761
Mph1103I ATGCAT 1 cut(s) 1624
MroXI GAANNNNTTC 1 cut(s) 1452
MslI CAYNNNNRTG 1 cut(s) 392
MspA1I CMGCKG 1 cut(s) 1124
MspI CCGG 2 cut(s) 244, 505
MwoI GCNNNNNNNGC 1 cut(s) 1672
NcoI CCATGG 1 cut(s) 196
NdeI CATATG 1 cut(s) 111
NdeII GATC 3 cut(s) 39, 364, 418
NlaIV GGNNCC 4 cut(s) 366, 1272, 1582, 1583
NmuCI GTSAC 2 cut(s) 1387, 2189
NsbI TGCGCA 1 cut(s) 224
NsiI ATGCAT 1 cut(s) 1624
NspI RCATGY 3 cut(s) 354, 1855, 1885
PaeI GCATGC 1 cut(s) 354
PagI TCATGA 2 cut(s) 300, 1456
PceI AGGCCT 2 cut(s) 142, 1476
PciSI GCTCTTC 1 cut(s) 1247
PdmI GAANNNNTTC 1 cut(s) 1452
PfeI GAWTC 4 cut(s) 247, 263, 650, 1203
PflMI CCANNNNNTGG 1 cut(s) 1252
PinAI ACCGGT 1 cut(s) 504
PkrI GCNGC 4 cut(s) 227, 406, 409, 1126
PleI GAGTC 2 cut(s) 1078, 2230
PpsI GAGTC 2 cut(s) 1078, 2230
PpuMI RGGWCCY 1 cut(s) 1660
PshBI ATTAAT 1 cut(s) 2037
PsiI TTATAA 1 cut(s) 1178
Psp5II RGGWCCY 1 cut(s) 1660
PspN4I GGNNCC 4 cut(s) 366, 1272, 1582, 1583
PspOMI GGGCCC 1 cut(s) 1580
PspPI GGNCC 3 cut(s) 1580, 1581, 1660
PspPPI RGGWCCY 1 cut(s) 1660
PsuI RGATCY 2 cut(s) 39, 364
PvuII CAGCTG 1 cut(s) 1124
RsaI GTAC 5 cut(s) 685, 874, 1059, 1716, 1835
RsaNI GTAC 5 cut(s) 684, 873, 1058, 1715, 1834
RseI CAYNNNNRTG 1 cut(s) 392
SapI GCTCTTC 1 cut(s) 1247
SatI GCNGC 4 cut(s) 226, 405, 408, 1125
Sau3AI GATC 3 cut(s) 39, 364, 418
Sau96I GGNCC 3 cut(s) 1580, 1581, 1660
ScaI AGTACT 2 cut(s) 874, 1835
SchI GAGTC 2 cut(s) 1078, 2231
SduI GDGCHC 4 cut(s) 14, 237, 399, 1584
SfaNI GCATC 8 cut(s) 172, 210, 419, 576, 1609, 1662, 1848, 1890
SfcI CTRYAG 2 cut(s) 908, 1695
SinI GGWCC 1 cut(s) 1660
SmiMI CAYNNNNRTG 1 cut(s) 392
SmlI CTYRAG 1 cut(s) 2180
SmoI CTYRAG 1 cut(s) 2180
SphI GCATGC 1 cut(s) 354
Sse9I AATT 9 cut(s) 288, 467, 658, 696, 961, 1089, 1553, 1816, 2206
SseBI AGGCCT 2 cut(s) 142, 1476
SsiI CCGC 3 cut(s) 58, 405, 1150
SspI AATATT 3 cut(s) 769, 890, 1792
SspMI CTAG 5 cut(s) 374, 681, 1748, 1890, 2016
StuI AGGCCT 2 cut(s) 142, 1476
StyI CCWWGG 1 cut(s) 196
TaaI ACNGT 2 cut(s) 1628, 1699
TaiI ACGT 2 cut(s) 758, 1063
TaqI TCGA 4 cut(s) 128, 552, 790, 1210
TaqII GACCGA 1 cut(s) 184
TasI AATT 9 cut(s) 288, 467, 658, 696, 961, 1089, 1553, 1816, 2206
TatI WGTACW 4 cut(s) 683, 872, 1714, 1833
TauI GCSGC 1 cut(s) 407
TfiI GAWTC 4 cut(s) 247, 263, 650, 1203
TscAI CASTG 2 cut(s) 1302, 1407
TseFI GTSAC 2 cut(s) 1387, 2189
TseI GCWGC 3 cut(s) 225, 407, 1124
Tsp45I GTSAC 2 cut(s) 1387, 2189
TspGWI ACGGA 1 cut(s) 1966
TspRI CASTG 2 cut(s) 1302, 1407
Van91I CCANNNNNTGG 1 cut(s) 1252
VneI GTGCAC 2 cut(s) 10, 395
VpaK11BI GGWCC 1 cut(s) 1660
VspI ATTAAT 1 cut(s) 2037
XapI RAATTY 1 cut(s) 961
XceI RCATGY 3 cut(s) 354, 1855, 1885
XmnI GAANNNNTTC 1 cut(s) 1452
XspI CTAG 5 cut(s) 374, 681, 1748, 1890, 2016
ZrmI AGTACT 2 cut(s) 874, 1835
Zsp2I ATGCAT 1 cut(s) 1624
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.