Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0009255

Physical Location & Seq

Genomic Coordinates Forward (+)

60813320 .. 60816333

Gene Structure 3014 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG392100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1209 bp

ATGGAAGCAGAAGCTCTGAATCACATAAAGTACGGCGTCCCTTTCTACGGCATCGGTTGGGTTCCCGACGGCATCCCTCTCACCTCCTCGGAACAACCGGAGCAGGAGAACAACGATCAGAAAACCGAGACTCGGACCGAGTCGACTCAGTCGGTTCCCGATTCGAACCATATAGTATTGGCCGGCGGTGGCGGCGAGGGCAACAGCGGCGTCAAAAACGCCGTCGTTCTCATCCAGTTCGATCCCGCCTCGACTTCTATCTCCCATGAGCCGGTGGCTAAGCTCGGGTTAGGCTCTGATTTGCCTTACAGAATGGCGGTTCATCCCGGTGCTGACGGTCTGATTTGTTCGTTTCCTGAAAGCTGCAGTTGGTTTGAATGGGAGAAAGAATTGAGGGAGGGAGCTCATAAGCTAAGTGTGAAGCAATCTGATAGAGTACTTAAACAATTGCAAGATGTAGGGCAACAGTTAGCGCTGGCATTTAACAAAGAAGGTTCGGTGCTTGCTACCGGAGGCGAGGATGGCAATTTAAGGGTTTTCAAGTGGCCCAGCATGGAAATTATGTTCACTGAAGCTCAAGCTCATAGAACAGTCAAGCAGTTAGATTTCAGCCATGACGGGAAATTTCTTGTCTCCTTGGGACAAAGTGGCCCTGGTAGAGTCTGGGATGTGACTTCAGCTGCAGTTGTAGCTACTTTACCAACGGAAAAGGATGAGGTATTTTGTGCATGCAAATTTTCTCTAGTGAACAATGGGATTGAAGTTCTACATCTTGCAGATAAAGATGGAATCATTGTAACATGGAACACAACCACATGGAGGAGGGTTCGATCCAAGCGAATTACTCGAGATGGCATCACCGCCTTTGATGTTTCGGCTGATGGAAAGCTCCTTGCATGCGGGACAACTGCTGGAGATCTTTTGATACTAAAGTCAGCCGGACTGCGGGTTCAAAAAGTCATCCCAAAAGCACACAGTGGGTTTGTAACTGCGTTGAGTTTCTCGCATGATTCAAGAGTTTTGGCTTCCACATCAATGGACTCAAGTGCAAGGGTGTCCACACTTGAGGAAGTGAAGAAAAGTGGAGTGAGCTTATGGGTTGTTATACTCATTATCCTAGTATCCATTCTCGCATATTTCCTAAACGATCCTGAGAGCTGGACAATGTTGAAGTCTGAATTGGAGAAAGTTTACAGCTTGTGGCGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002790 GO:0003400 GO:0003674 GO:0005085 GO:0005090 GO:0005096 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005783 GO:0005789 GO:0005886 GO:0006810 GO:0006888 GO:0008047 GO:0008104 GO:0008150 GO:0009306 GO:0009987 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016021 GO:0016192 GO:0019899 GO:0030176 GO:0030234 GO:0030695 GO:0031090 GO:0031224 GO:0031227 GO:0031984 GO:0032386 GO:0032879 GO:0032940 GO:0033036 GO:0033043 GO:0042175 GO:0042886 GO:0043085 GO:0043087 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043254 GO:0043547 GO:0044087 GO:0044093 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046903 GO:0046907 GO:0048193 GO:0048209 GO:0050789 GO:0050790 GO:0050794 GO:0051020 GO:0051049 GO:0051128 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0051641 GO:0051649 GO:0060341 GO:0060589 GO:0060627 GO:0060628 GO:0065007 GO:0065009 GO:0071702 GO:0071705 GO:0071944 GO:0090113 GO:0098588 GO:0098772 GO:0098805 GO:0098827

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

ANAPC4_WD40 WD40

Protein Analysis

402

Amino Acids

43.86

Weight (kDa)

5.74

Isoelectric Point (pI)

39.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_THOC3	PF25174	143 - 238	5.6e-11	THOC3 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	146 - 307	8.1e-16	WDR3 first beta-propeller domain
Beta-prop_EML_2	PF23414	154 - 230	2.4e-06	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR5	PF25175	157 - 276	6.4e-12	WDR5 beta-propeller domain
WD40_Prp19	PF24814	157 - 352	1.5e-15	Prp19 WD40 domain
WDR55	PF24796	157 - 344	2.9e-09	WDR55
WD40_WDHD1_1st	PF24817	158 - 344	8.3e-14	WDHD1 first WD40 domain
Beta-prop_EML	PF23409	197 - 350	1.1e-06	Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_EML_2	PF23414	217 - 359	7.7e-11	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR36-Utp21_1st	PF25171	217 - 350	2.5e-06	WDR36/Utp21 first beta-propeller
WD40_CDC20-Fz	PF24807	221 - 359	3.2e-08	CDC20/Fizzy WD40 domain
Beta-prop_THOC3	PF25174	254 - 358	3.1e-08	THOC3 beta-propeller domain
Beta-prop_WDR5	PF25175	259 - 352	5.2e-07	WDR5 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0009255)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G01470 AT5G50550 AT5G50650
fragaria_vesca	FvH4_4g32580
malus_domestica	MD08G1204700.v1.1 MD13G1024400.v1.1 MD16G1027100.v1.1
prunus_persica	Prupe.1G326100_v2.0.a1 Prupe.1G326100_v2.0.a1
pyrus_communis	pycom13g02270 pycom16g02290
rosa_chinensis	RchiOBHm_Chr4g0441451
rosa_laevigata	RLG00000006091
rosa_multiflora	Rmu_sc0003360.1_g000007 Rmu_sc0011145.1_g000002
rosa_roxburghii	Rroxscaffold_5G00382320
rosa_rugosa	Rorug04G0333800
rosa_samantha	Rh4AG385300 Rh4BG399500 Rh4CG414500 Rh4DG392100
rosa_wichuraiana	Rw4G033280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	143
AciI	CCGC	8 cut(s)	186, 192, 207, 246, 317, 861, 900, 946
AclWI	GGATC	3 cut(s)	236, 825, 1142
AcoI	YGGCCR	1 cut(s)	180
AcsI	RAATTY	2 cut(s)	623, 734
AcuI	CTGAAG	2 cut(s)	591, 660
AcyI	GRCGYC	2 cut(s)	36, 210
AdeI	CACNNNGTG	1 cut(s)	977
AfaI	GTAC	2 cut(s)	32, 438
AfeI	AGCGCT	1 cut(s)	474
AfiI	CCNNNNNNNGG	5 cut(s)	47, 132, 271, 819, 945
AgsI	TTSAA	6 cut(s)	377, 541, 761, 953, 1014, 1171
AjnI	CCWGG	1 cut(s)	652
AjuI	GAANNNNNNNTTGG	2 cut(s)	1163, 1195
AloI	GAACNNNNNNTCC	4 cut(s)	548, 580, 933, 965
Alw21I	GWGCWC	1 cut(s)	406
Alw26I	GTCTC	2 cut(s)	122, 637
AlwI	GGATC	3 cut(s)	236, 825, 1142
Ama87I	CYCGRG	2 cut(s)	284, 846
Aor51HI	AGCGCT	1 cut(s)	474
AoxI	GGCC	3 cut(s)	180, 545, 649
ApeKI	GCWGC	2 cut(s)	363, 680
ApoI	RAATTY	2 cut(s)	623, 734
ArsI	GACNNNNNNTTYG	2 cut(s)	207, 239
AspLEI	GCGC	1 cut(s)	475
AspS9I	GGNCC	3 cut(s)	135, 546, 650
AsuC2I	CCSGG	1 cut(s)	327
AsuHPI	GGTGA	2 cut(s)	73, 850
AsuII	TTCGAA	1 cut(s)	164
AvaI	CYCGRG	2 cut(s)	284, 846
AvaII	GGWCC	1 cut(s)	135
BaeI	ACNNNNGTAYC	2 cut(s)	917, 950
BanII	GRGCYC	1 cut(s)	406
Bbv12I	GWGCWC	1 cut(s)	406
BbvI	GCAGC	2 cut(s)	350, 667
BccI	CCATC	4 cut(s)	515, 779, 845, 875
BceAI	ACGGC	4 cut(s)	49, 64, 85, 206
BciT130I	CCWGG	1 cut(s)	654
BciVI	GTATCC	1 cut(s)	1132
BcnI	CCSGG	1 cut(s)	327
BcoDI	GTCTC	2 cut(s)	122, 637
BfaI	CTAG	2 cut(s)	743, 1118
BfmI	CTRYAG	2 cut(s)	364, 681
BfoI	RGCGCY	1 cut(s)	476
BfuI	GTATCC	1 cut(s)	1132
BglII	AGATCT	1 cut(s)	916
BisI	GCNGC	4 cut(s)	193, 208, 364, 681
BlpI	GCTNAGC	1 cut(s)	279
BlsI	GCNGC	4 cut(s)	194, 209, 365, 682
BmcAI	AGTACT	1 cut(s)	438
Bme1390I	CCNGG	2 cut(s)	327, 654
Bme18I	GGWCC	1 cut(s)	135
BmeT110I	CYCGRG	2 cut(s)	284, 846
BmgT120I	GGNCC	3 cut(s)	135, 546, 650
BmiI	GGNNCC	2 cut(s)	63, 156
BmrFI	CCNGG	2 cut(s)	327, 654
BmsI	GCATC	3 cut(s)	60, 81, 864
BpmI	CTGGAG	1 cut(s)	933
Bpu1102I	GCTNAGC	1 cut(s)	279
Bpu14I	TTCGAA	1 cut(s)	164
BpuEI	CTTGAG	3 cut(s)	561, 1027, 1085
BpuMI	CCSGG	1 cut(s)	327
BsaHI	GRCGYC	2 cut(s)	36, 210
BsaJI	CCNNGG	3 cut(s)	87, 636, 652
BsaWI	WCCGGW	2 cut(s)	97, 509
Bsc4I	CCNNNNNNNGG	5 cut(s)	47, 132, 271, 819, 945
Bse118I	RCCGGY	2 cut(s)	182, 271
Bse1I	ACTGG	1 cut(s)	235
BseBI	CCWGG	1 cut(s)	654
BseDI	CCNNGG	3 cut(s)	87, 636, 652
BseGI	GGATG	7 cut(s)	72, 231, 322, 526, 673, 718, 960
BseLI	CCNNNNNNNGG	5 cut(s)	47, 132, 271, 819, 945
BseMII	CTCAG	2 cut(s)	161, 1143
BseNI	ACTGG	1 cut(s)	235
BseRI	GAGGAG	2 cut(s)	76, 835
BseXI	GCAGC	2 cut(s)	350, 667
BseYI	CCCAGC	1 cut(s)	548
BshFI	GGCC	3 cut(s)	182, 547, 651
BsiHKAI	GWGCWC	1 cut(s)	406
BsiHKCI	CYCGRG	2 cut(s)	284, 846
BsiSI	CCGG	6 cut(s)	98, 183, 272, 327, 510, 939
BslFI	GGGAC	3 cut(s)	23, 654, 916
BslI	CCNNNNNNNGG	5 cut(s)	47, 132, 271, 819, 945
BsmAI	GTCTC	2 cut(s)	122, 637
BsmFI	GGGAC	3 cut(s)	23, 654, 916
BsnI	GGCC	3 cut(s)	182, 547, 651
BsoBI	CYCGRG	2 cut(s)	284, 846
Bsp119I	TTCGAA	1 cut(s)	164
Bsp1286I	GDGCHC	1 cut(s)	406
Bsp143I	GATC	5 cut(s)	115, 241, 830, 916, 1147
Bsp1720I	GCTNAGC	1 cut(s)	279
BspACI	CCGC	8 cut(s)	186, 192, 207, 246, 317, 861, 900, 946
BspANI	GGCC	3 cut(s)	182, 547, 651
BspCNI	CTCAG	2 cut(s)	160, 1144
BspLI	GGNNCC	2 cut(s)	63, 156
BspMAI	CTGCAG	2 cut(s)	368, 685
BspPI	GGATC	3 cut(s)	236, 825, 1142
BspT104I	TTCGAA	1 cut(s)	164
BsrFI	RCCGGY	2 cut(s)	182, 271
BsrI	ACTGG	1 cut(s)	235
BssAI	RCCGGY	2 cut(s)	182, 271
BssECI	CCNNGG	3 cut(s)	87, 636, 652
BssMI	GATC	5 cut(s)	115, 241, 830, 916, 1147
BssNI	GRCGYC	2 cut(s)	36, 210
BssT1I	CCWWGG	1 cut(s)	636
Bst2UI	CCWGG	1 cut(s)	654
Bst4CI	ACNGT	4 cut(s)	338, 468, 592, 977
BstACI	GRCGYC	2 cut(s)	36, 210
BstBI	TTCGAA	1 cut(s)	164
BstC8I	GCNNGC	5 cut(s)	184, 477, 504, 730, 898
BstDEI	CTNAG	4 cut(s)	147, 279, 413, 1152
BstF5I	GGATG	7 cut(s)	72, 231, 322, 526, 673, 718, 960
BstH2I	RGCGCY	1 cut(s)	476
BstHHI	GCGC	1 cut(s)	475
BstKTI	GATC	5 cut(s)	118, 244, 833, 919, 1150
BstMAI	GTCTC	2 cut(s)	122, 637
BstMBI	GATC	5 cut(s)	115, 241, 830, 916, 1147
BstMWI	GCNNNNNNNGC	5 cut(s)	192, 198, 207, 522, 689
BstNI	CCWGG	1 cut(s)	654
BstNSI	RCATGY	2 cut(s)	732, 900
BstSCI	CCNGG	2 cut(s)	325, 652
BstSFI	CTRYAG	2 cut(s)	364, 681
BstV1I	GCAGC	2 cut(s)	350, 667
BstX2I	RGATCY	1 cut(s)	916
BstXI	CCANNNNNNTGG	1 cut(s)	1036
BstYI	RGATCY	1 cut(s)	916
BsuI	GTATCC	1 cut(s)	1132
BsuRI	GGCC	3 cut(s)	182, 547, 651
BtsCI	GGATG	7 cut(s)	72, 231, 322, 526, 673, 718, 960
BtsIMutI	CAGTG	2 cut(s)	567, 982
Cac8I	GCNNGC	5 cut(s)	184, 477, 504, 730, 898
CfoI	GCGC	1 cut(s)	475
Cfr10I	RCCGGY	2 cut(s)	182, 271
Cfr13I	GGNCC	3 cut(s)	135, 546, 650
CpoI	CGGWCCG	1 cut(s)	135
CseI	GACGC	2 cut(s)	25, 199
Csp6I	GTAC	2 cut(s)	31, 437
CspI	CGGWCCG	1 cut(s)	135
CviAII	CATG	8 cut(s)	266, 553, 614, 729, 801, 816, 897, 1007
CviQI	GTAC	2 cut(s)	31, 437
DdeI	CTNAG	4 cut(s)	147, 279, 413, 1152
DpnI	GATC	5 cut(s)	117, 243, 832, 918, 1149
DpnII	GATC	5 cut(s)	115, 241, 830, 916, 1147
DraIII	CACNNNGTG	1 cut(s)	977
EaeI	YGGCCR	1 cut(s)	180
Ecl136II	GAGCTC	1 cut(s)	404
Eco130I	CCWWGG	1 cut(s)	636
Eco24I	GRGCYC	1 cut(s)	406
Eco47I	GGWCC	1 cut(s)	135
Eco47III	AGCGCT	1 cut(s)	474
Eco53kI	GAGCTC	1 cut(s)	404
Eco57I	CTGAAG	2 cut(s)	591, 660
Eco88I	CYCGRG	2 cut(s)	284, 846
EcoICRI	GAGCTC	1 cut(s)	404
EcoRII	CCWGG	1 cut(s)	652
EcoT14I	CCWWGG	1 cut(s)	636
EcoT38I	GRGCYC	1 cut(s)	406
ErhI	CCWWGG	1 cut(s)	636
FaeI	CATG	8 cut(s)	269, 556, 617, 732, 804, 819, 900, 1010
FaqI	GGGAC	3 cut(s)	23, 654, 916
FatI	CATG	8 cut(s)	265, 552, 613, 728, 800, 815, 896, 1006
FauI	CCCGC	3 cut(s)	253, 893, 939
FblI	GTMKAC	1 cut(s)	143
Fnu4HI	GCNGC	4 cut(s)	193, 208, 364, 681
FokI	GGATG	7 cut(s)	59, 218, 309, 533, 680, 725, 947
FriOI	GRGCYC	1 cut(s)	406
Fsp4HI	GCNGC	4 cut(s)	193, 208, 364, 681
FspBI	CTAG	2 cut(s)	743, 1118
GlaI	GCGC	1 cut(s)	474
GluI	GCNGC	4 cut(s)	193, 208, 364, 681
GsaI	CCCAGC	1 cut(s)	552
GsuI	CTGGAG	1 cut(s)	933
HaeII	RGCGCY	1 cut(s)	476
HaeIII	GGCC	3 cut(s)	182, 547, 651
HapII	CCGG	6 cut(s)	98, 183, 272, 327, 510, 939
HgaI	GACGC	2 cut(s)	25, 199
HhaI	GCGC	1 cut(s)	475
Hin1I	GRCGYC	2 cut(s)	36, 210
Hin1II	CATG	8 cut(s)	269, 556, 617, 732, 804, 819, 900, 1010
Hin6I	GCGC	1 cut(s)	473
HinP1I	GCGC	1 cut(s)	473
HincII	GTYRAC	1 cut(s)	144
HindII	GTYRAC	1 cut(s)	144
HinfI	GANTC	9 cut(s)	19, 130, 140, 145, 161, 660, 789, 1010, 1040
HpaII	CCGG	6 cut(s)	98, 183, 272, 327, 510, 939
HphI	GGTGA	2 cut(s)	73, 850
Hpy166II	GTNNAC	5 cut(s)	144, 567, 748, 1059, 1192
Hpy188I	TCNGA	8 cut(s)	18, 91, 120, 135, 298, 342, 430, 1177
Hpy188III	TCNNGA	6 cut(s)	65, 158, 356, 848, 1014, 1151
Hpy8I	GTNNAC	5 cut(s)	144, 567, 748, 1059, 1192
Hpy99I	CGWCG	2 cut(s)	71, 227
HpyAV	CCTTC	1 cut(s)	485
HpyCH4III	ACNGT	4 cut(s)	338, 468, 592, 977
HpyCH4V	TGCA	8 cut(s)	366, 451, 683, 728, 732, 776, 896, 1049
HpyF10VI	GCNNNNNNNGC	5 cut(s)	192, 198, 207, 522, 689
HpyF3I	CTNAG	4 cut(s)	147, 279, 413, 1152
Hsp92I	GRCGYC	2 cut(s)	36, 210
Hsp92II	CATG	8 cut(s)	269, 556, 617, 732, 804, 819, 900, 1010
HspAI	GCGC	1 cut(s)	473
KroI	GCCGGC	1 cut(s)	182
KroNI	GCCGGC	1 cut(s)	184
Kzo9I	GATC	5 cut(s)	115, 241, 830, 916, 1147
LmnI	GCTCC	3 cut(s)	100, 401, 894
Lsp1109I	GCAGC	2 cut(s)	350, 667
LweI	GCATC	3 cut(s)	60, 81, 864
MaeI	CTAG	2 cut(s)	743, 1118
MaeIII	GTNAC	3 cut(s)	670, 796, 985
MalI	GATC	5 cut(s)	117, 243, 832, 918, 1149
MboI	GATC	5 cut(s)	115, 241, 830, 916, 1147
MboII	GAAGA	1 cut(s)	1087
MfeI	CAATTG	1 cut(s)	446
MflI	RGATCY	1 cut(s)	916
MhlI	GDGCHC	1 cut(s)	406
MluCI	AATT	8 cut(s)	389, 446, 526, 558, 623, 734, 840, 1178
MlyI	GAGTC	5 cut(s)	124, 139, 149, 669, 1034
MroNI	GCCGGC	1 cut(s)	182
MseI	TTAA	3 cut(s)	441, 483, 530
MslI	CAYNNNNRTG	2 cut(s)	327, 1034
MspA1I	CMGCKG	2 cut(s)	207, 680
MspI	CCGG	6 cut(s)	98, 183, 272, 327, 510, 939
MspR9I	CCNGG	2 cut(s)	327, 654
MunI	CAATTG	1 cut(s)	446
MvaI	CCWGG	1 cut(s)	654
MwoI	GCNNNNNNNGC	5 cut(s)	192, 198, 207, 522, 689
NaeI	GCCGGC	1 cut(s)	184
NciI	CCSGG	1 cut(s)	327
NdeII	GATC	5 cut(s)	115, 241, 830, 916, 1147
NgoMIV	GCCGGC	1 cut(s)	182
NlaIII	CATG	8 cut(s)	269, 556, 617, 732, 804, 819, 900, 1010
NlaIV	GGNNCC	2 cut(s)	63, 156
NmuCI	GTSAC	1 cut(s)	670
NspI	RCATGY	2 cut(s)	732, 900
NspV	TTCGAA	1 cut(s)	164
PaeI	GCATGC	2 cut(s)	732, 900
PaeR7I	CTCGAG	1 cut(s)	846
PcsI	WCGNNNNNNNCGW	1 cut(s)	835
PdiI	GCCGGC	1 cut(s)	184
PfeI	GAWTC	4 cut(s)	19, 161, 789, 1010
PflFI	GACNNNGTC	2 cut(s)	139, 148
PkrI	GCNGC	4 cut(s)	194, 209, 365, 682
PleI	GAGTC	5 cut(s)	124, 139, 148, 668, 1034
PpsI	GAGTC	5 cut(s)	124, 139, 148, 668, 1034
Psp124BI	GAGCTC	1 cut(s)	406
Psp6I	CCWGG	1 cut(s)	652
PspFI	CCCAGC	1 cut(s)	548
PspGI	CCWGG	1 cut(s)	652
PspN4I	GGNNCC	2 cut(s)	63, 156
PspPI	GGNCC	3 cut(s)	135, 546, 650
PstI	CTGCAG	2 cut(s)	368, 685
PsuI	RGATCY	1 cut(s)	916
PsyI	GACNNNGTC	2 cut(s)	139, 148
PvuII	CAGCTG	1 cut(s)	680
RsaI	GTAC	2 cut(s)	32, 438
RsaNI	GTAC	2 cut(s)	31, 437
RseI	CAYNNNNRTG	2 cut(s)	327, 1034
Rsr2I	CGGWCCG	1 cut(s)	135
RsrII	CGGWCCG	1 cut(s)	135
SacI	GAGCTC	1 cut(s)	406
SalI	GTCGAC	1 cut(s)	142
SaqAI	TTAA	3 cut(s)	441, 483, 530
SatI	GCNGC	4 cut(s)	193, 208, 364, 681
Sau3AI	GATC	5 cut(s)	115, 241, 830, 916, 1147
Sau96I	GGNCC	3 cut(s)	135, 546, 650
ScaI	AGTACT	1 cut(s)	438
SchI	GAGTC	5 cut(s)	124, 139, 149, 669, 1034
ScrFI	CCNGG	2 cut(s)	327, 654
SduI	GDGCHC	1 cut(s)	406
SfaNI	GCATC	3 cut(s)	60, 81, 864
SfcI	CTRYAG	2 cut(s)	364, 681
Sfr274I	CTCGAG	1 cut(s)	846
SfuI	TTCGAA	1 cut(s)	164
SinI	GGWCC	1 cut(s)	135
SlaI	CTCGAG	1 cut(s)	846
SmiMI	CAYNNNNRTG	2 cut(s)	327, 1034
SmlI	CTYRAG	4 cut(s)	576, 846, 1042, 1064
SmoI	CTYRAG	4 cut(s)	576, 846, 1042, 1064
SphI	GCATGC	2 cut(s)	732, 900
Sse9I	AATT	8 cut(s)	389, 446, 526, 558, 623, 734, 840, 1178
SsiI	CCGC	8 cut(s)	186, 192, 207, 246, 317, 861, 900, 946
SspMI	CTAG	2 cut(s)	743, 1118
SstI	GAGCTC	1 cut(s)	406
StyD4I	CCNGG	2 cut(s)	325, 652
StyI	CCWWGG	1 cut(s)	636
TaaI	ACNGT	4 cut(s)	338, 468, 592, 977
TaqI	TCGA	6 cut(s)	143, 164, 240, 251, 829, 847
TaqII	GACCGA	1 cut(s)	152
TasI	AATT	8 cut(s)	389, 446, 526, 558, 623, 734, 840, 1178
TatI	WGTACW	1 cut(s)	436
TauI	GCSGC	2 cut(s)	195, 210
TfiI	GAWTC	4 cut(s)	19, 161, 789, 1010
Tru1I	TTAA	3 cut(s)	441, 483, 530
Tru9I	TTAA	3 cut(s)	441, 483, 530
TscAI	CASTG	2 cut(s)	574, 982
TseFI	GTSAC	1 cut(s)	670
TseI	GCWGC	2 cut(s)	363, 680
Tsp45I	GTSAC	1 cut(s)	670
TspDTI	ATGAA	1 cut(s)	311
TspGWI	ACGGA	1 cut(s)	719
TspRI	CASTG	2 cut(s)	574, 982
Tth111I	GACNNNGTC	2 cut(s)	139, 148
VpaK11BI	GGWCC	1 cut(s)	135
XapI	RAATTY	2 cut(s)	623, 734
XceI	RCATGY	2 cut(s)	732, 900
XhoI	CTCGAG	1 cut(s)	846
XmiI	GTMKAC	1 cut(s)	143
XspI	CTAG	2 cut(s)	743, 1118
ZrmI	AGTACT	1 cut(s)	438

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.