GPI-anchored adhesin-like protein PGA55
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G34920 |
| fragaria_vesca | FvH4_3g13290 FvH4_3g13290 |
| malus_domestica | MD05G1243100.v1.1 MD10G1225200.v1.1 |
| prunus_persica | Prupe.4G120300_v2.0.a1 Prupe.4G120300_v2.0.a1 |
| pyrus_communis | pycom10g18910 |
| rosa_chinensis | RchiOBHm_Chr5g0021761 |
| rosa_laevigata | RLG00000032625 |
| rosa_multiflora | Rmu_ssc0000233.1_g000006 |
| rosa_roxburghii | Rroxscaffold_1G00056950 |
| rosa_rugosa | Rorug05G0069000 Rorug05G0069100 Rorug05G0069200 |
| rosa_samantha | Rh5AG157700 Rh5BG157300 Rh5CG171500 Rh5DG157600 |
| rosa_wichuraiana | Rw5G014050 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1070 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 583, 2757 |
| AatII | GACGTC | 1 cut(s) | 419 |
| Acc36I | ACCTGC | 1 cut(s) | 1247 |
| Acc65I | GGTACC | 1 cut(s) | 2616 |
| AccB1I | GGYRCC | 2 cut(s) | 397, 2616 |
| AccI | GTMKAC | 4 cut(s) | 419, 1443, 2505, 3555 |
| AccII | CGCG | 2 cut(s) | 1081, 2229 |
| AciI | CCGC | 5 cut(s) | 64, 683, 1079, 1165, 1280 |
| AclWI | GGATC | 6 cut(s) | 63, 150, 988, 1324, 2105, 2570 |
| AcsI | RAATTY | 4 cut(s) | 507, 847, 1206, 1343 |
| AcuI | CTGAAG | 2 cut(s) | 690, 2880 |
| AcvI | CACGTG | 1 cut(s) | 2935 |
| AcyI | GRCGYC | 2 cut(s) | 398, 416 |
| AfeI | AGCGCT | 1 cut(s) | 973 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 1193, 1313, 1411, 2129, 2318, 2914, 3109 |
| AflIII | ACRYGT | 4 cut(s) | 2756, 2932, 2950, 3043 |
| AgeI | ACCGGT | 1 cut(s) | 72 |
| AhlI | ACTAGT | 2 cut(s) | 1352, 1979 |
| AjnI | CCWGG | 4 cut(s) | 201, 2057, 2913, 3588 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1953, 1985 |
| Alw21I | GWGCWC | 3 cut(s) | 1380, 1776, 3477 |
| Alw26I | GTCTC | 4 cut(s) | 431, 501, 569, 3622 |
| Alw44I | GTGCAC | 1 cut(s) | 1376 |
| AlwI | GGATC | 6 cut(s) | 63, 150, 988, 1324, 2105, 2570 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 593, 2858 |
| Ama87I | CYCGRG | 1 cut(s) | 286 |
| Aor51HI | AGCGCT | 1 cut(s) | 973 |
| AoxI | GGCC | 3 cut(s) | 24, 1054, 1195 |
| ApaLI | GTGCAC | 1 cut(s) | 1376 |
| ApoI | RAATTY | 4 cut(s) | 507, 847, 1206, 1343 |
| AsiGI | ACCGGT | 1 cut(s) | 72 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1863, 2164, 2359 |
| Asp718I | GGTACC | 1 cut(s) | 2616 |
| AspLEI | GCGC | 7 cut(s) | 34, 400, 800, 974, 1083, 1312, 2849 |
| AspS9I | GGNCC | 3 cut(s) | 70, 914, 3328 |
| AsuC2I | CCSGG | 3 cut(s) | 68, 693, 1030 |
| AvaI | CYCGRG | 1 cut(s) | 286 |
| AvaII | GGWCC | 3 cut(s) | 70, 914, 3328 |
| BaeGI | GKGCMC | 1 cut(s) | 1380 |
| BanI | GGYRCC | 2 cut(s) | 397, 2616 |
| BanII | GRGCYC | 2 cut(s) | 287, 3477 |
| BauI | CACGAG | 2 cut(s) | 1293, 3131 |
| BbrPI | CACGTG | 1 cut(s) | 2935 |
| BbsI | GAAGAC | 4 cut(s) | 156, 904, 2604, 2982 |
| Bbv12I | GWGCWC | 3 cut(s) | 1380, 1776, 3477 |
| BceAI | ACGGC | 1 cut(s) | 19 |
| BciT130I | CCWGG | 4 cut(s) | 203, 2059, 2915, 3590 |
| BciVI | GTATCC | 1 cut(s) | 703 |
| BclI | TGATCA | 2 cut(s) | 949, 1036 |
| BcnI | CCSGG | 3 cut(s) | 68, 693, 1030 |
| BcoDI | GTCTC | 4 cut(s) | 431, 501, 569, 3622 |
| BcuI | ACTAGT | 2 cut(s) | 1352, 1979 |
| BfmI | CTRYAG | 3 cut(s) | 1440, 2199, 2394 |
| BfoI | RGCGCY | 3 cut(s) | 401, 801, 975 |
| BfuAI | ACCTGC | 1 cut(s) | 1247 |
| BfuI | GTATCC | 1 cut(s) | 703 |
| BglII | AGATCT | 2 cut(s) | 2020, 3661 |
| BlpI | GCTNAGC | 1 cut(s) | 1359 |
| BmcAI | AGTACT | 4 cut(s) | 1530, 1662, 1794, 1914 |
| Bme1390I | CCNGG | 7 cut(s) | 68, 203, 693, 1030, 2059, 2915, 3590 |
| Bme18I | GGWCC | 3 cut(s) | 70, 914, 3328 |
| BmeT110I | CYCGRG | 1 cut(s) | 286 |
| BmgT120I | GGNCC | 3 cut(s) | 70, 914, 3328 |
| BmiI | GGNNCC | 8 cut(s) | 71, 178, 219, 399, 524, 915, 2618, 3209 |
| BmrFI | CCNGG | 7 cut(s) | 68, 203, 693, 1030, 2059, 2915, 3590 |
| BmrI | ACTGGG | 9 cut(s) | 1464, 1563, 1652, 1784, 1815, 1904, 1947, 2343, 2518 |
| BmuI | ACTGGG | 9 cut(s) | 1464, 1563, 1652, 1784, 1815, 1904, 1947, 2343, 2518 |
| BpiI | GAAGAC | 4 cut(s) | 156, 904, 2604, 2982 |
| BpmI | CTGGAG | 1 cut(s) | 615 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1359 |
| BpuEI | CTTGAG | 3 cut(s) | 110, 2335, 3508 |
| BpuMI | CCSGG | 3 cut(s) | 68, 693, 1030 |
| Bsa29I | ATCGAT | 1 cut(s) | 310 |
| BsaAI | YACGTR | 2 cut(s) | 1016, 2935 |
| BsaBI | GATNNNNATC | 1 cut(s) | 954 |
| BsaHI | GRCGYC | 2 cut(s) | 398, 416 |
| BsaJI | CCNNGG | 7 cut(s) | 202, 287, 691, 1029, 2089, 2499, 2582 |
| BsaWI | WCCGGW | 1 cut(s) | 72 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 1193, 1313, 1411, 2129, 2318, 2914, 3109 |
| Bse118I | RCCGGY | 3 cut(s) | 72, 1306, 3429 |
| Bse3DI | GCAATG | 3 cut(s) | 94, 153, 3260 |
| Bse8I | GATNNNNATC | 1 cut(s) | 954 |
| BseBI | CCWGG | 4 cut(s) | 203, 2059, 2915, 3590 |
| BseCI | ATCGAT | 1 cut(s) | 310 |
| BseDI | CCNNGG | 7 cut(s) | 202, 287, 691, 1029, 2089, 2499, 2582 |
| BseJI | GATNNNNATC | 1 cut(s) | 954 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 1193, 1313, 1411, 2129, 2318, 2914, 3109 |
| BseMI | GCAATG | 3 cut(s) | 94, 153, 3260 |
| BseMII | CTCAG | 5 cut(s) | 600, 1348, 1350, 3463, 3516 |
| BseRI | GAGGAG | 5 cut(s) | 373, 2996, 3014, 3017, 3339 |
| BseSI | GKGCMC | 1 cut(s) | 1380 |
| BsgI | GTGCAG | 3 cut(s) | 97, 891, 2316 |
| Bsh1236I | CGCG | 2 cut(s) | 1081, 2229 |
| BshFI | GGCC | 3 cut(s) | 26, 1056, 1197 |
| BshNI | GGYRCC | 2 cut(s) | 397, 2616 |
| BshTI | ACCGGT | 1 cut(s) | 72 |
| BshVI | ATCGAT | 1 cut(s) | 310 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1380, 1776, 3477 |
| BsiHKCI | CYCGRG | 1 cut(s) | 286 |
| BsiSI | CCGG | 7 cut(s) | 67, 73, 693, 844, 1029, 1307, 3430 |
| BslFI | GGGAC | 4 cut(s) | 83, 673, 752, 2344 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 1193, 1313, 1411, 2129, 2318, 2914, 3109 |
| BsmAI | GTCTC | 4 cut(s) | 431, 501, 569, 3622 |
| BsmBI | CGTCTC | 1 cut(s) | 501 |
| BsmFI | GGGAC | 4 cut(s) | 83, 673, 752, 2344 |
| BsnI | GGCC | 3 cut(s) | 26, 1056, 1197 |
| BsoBI | CYCGRG | 1 cut(s) | 286 |
| Bsp1286I | GDGCHC | 4 cut(s) | 287, 1380, 1776, 3477 |
| Bsp1407I | TGTACA | 1 cut(s) | 3046 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1359 |
| Bsp68I | TCGCGA | 1 cut(s) | 2229 |
| BspACI | CCGC | 5 cut(s) | 64, 683, 1079, 1165, 1280 |
| BspANI | GGCC | 3 cut(s) | 26, 1056, 1197 |
| BspCNI | CTCAG | 5 cut(s) | 601, 1347, 1351, 3462, 3517 |
| BspDI | ATCGAT | 1 cut(s) | 310 |
| BspFNI | CGCG | 2 cut(s) | 1081, 2229 |
| BspLI | GGNNCC | 8 cut(s) | 71, 178, 219, 399, 524, 915, 2618, 3209 |
| BspMAI | CTGCAG | 1 cut(s) | 2398 |
| BspMI | ACCTGC | 1 cut(s) | 1247 |
| BspPI | GGATC | 6 cut(s) | 63, 150, 988, 1324, 2105, 2570 |
| BspT107I | GGYRCC | 2 cut(s) | 397, 2616 |
| BsrDI | GCAATG | 3 cut(s) | 94, 153, 3260 |
| BsrFI | RCCGGY | 3 cut(s) | 72, 1306, 3429 |
| BsrGI | TGTACA | 1 cut(s) | 3046 |
| BssAI | RCCGGY | 3 cut(s) | 72, 1306, 3429 |
| BssECI | CCNNGG | 7 cut(s) | 202, 287, 691, 1029, 2089, 2499, 2582 |
| BssNI | GRCGYC | 2 cut(s) | 398, 416 |
| BssSI | CACGAG | 2 cut(s) | 1293, 3131 |
| BssT1I | CCWWGG | 2 cut(s) | 2089, 2499 |
| Bst2BI | CACGAG | 2 cut(s) | 1293, 3131 |
| Bst2UI | CCWGG | 4 cut(s) | 203, 2059, 2915, 3590 |
| Bst6I | CTCTTC | 5 cut(s) | 360, 429, 512, 2991, 3646 |
| BstACI | GRCGYC | 2 cut(s) | 398, 416 |
| BstAUI | TGTACA | 1 cut(s) | 3046 |
| BstBAI | YACGTR | 2 cut(s) | 1016, 2935 |
| BstC8I | GCNNGC | 7 cut(s) | 294, 796, 1098, 1536, 1668, 1920, 2038 |
| BstDEI | CTNAG | 9 cut(s) | 609, 1179, 1220, 1334, 1359, 3449, 3525, 3530, 3621 |
| BstDSI | CCRYGG | 1 cut(s) | 2582 |
| BstEII | GGTNACC | 1 cut(s) | 2053 |
| BstFNI | CGCG | 2 cut(s) | 1081, 2229 |
| BstH2I | RGCGCY | 3 cut(s) | 401, 801, 975 |
| BstHHI | GCGC | 7 cut(s) | 34, 400, 800, 974, 1083, 1312, 2849 |
| BstMAI | GTCTC | 4 cut(s) | 431, 501, 569, 3622 |
| BstNI | CCWGG | 4 cut(s) | 203, 2059, 2915, 3590 |
| BstNSI | RCATGY | 5 cut(s) | 296, 2760, 2954, 3047, 3562 |
| BstPI | GGTNACC | 1 cut(s) | 2053 |
| BstSCI | CCNGG | 7 cut(s) | 66, 201, 691, 1028, 2057, 2913, 3588 |
| BstSFI | CTRYAG | 3 cut(s) | 1440, 2199, 2394 |
| BstSLI | GKGCMC | 1 cut(s) | 1380 |
| BstUI | CGCG | 2 cut(s) | 1081, 2229 |
| BstV2I | GAAGAC | 4 cut(s) | 156, 904, 2604, 2982 |
| BstX2I | RGATCY | 3 cut(s) | 1316, 2020, 3661 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3137 |
| BstYI | RGATCY | 3 cut(s) | 1316, 2020, 3661 |
| Bsu15I | ATCGAT | 1 cut(s) | 310 |
| BsuI | GTATCC | 1 cut(s) | 703 |
| BsuRI | GGCC | 3 cut(s) | 26, 1056, 1197 |
| BsuTUI | ATCGAT | 1 cut(s) | 310 |
| BtgI | CCRYGG | 1 cut(s) | 2582 |
| BtgZI | GCGATG | 1 cut(s) | 2244 |
| BtsI | GCAGTG | 2 cut(s) | 165, 1380 |
| BtuMI | TCGCGA | 1 cut(s) | 2229 |
| BveI | ACCTGC | 1 cut(s) | 1247 |
| Cac8I | GCNNGC | 7 cut(s) | 294, 796, 1098, 1536, 1668, 1920, 2038 |
| CaiI | CAGNNNCTG | 2 cut(s) | 593, 2858 |
| CfoI | GCGC | 7 cut(s) | 34, 400, 800, 974, 1083, 1312, 2849 |
| Cfr10I | RCCGGY | 3 cut(s) | 72, 1306, 3429 |
| Cfr13I | GGNCC | 3 cut(s) | 70, 914, 3328 |
| ClaI | ATCGAT | 1 cut(s) | 310 |
| CspAI | ACCGGT | 1 cut(s) | 72 |
| DdeI | CTNAG | 9 cut(s) | 609, 1179, 1220, 1334, 1359, 3449, 3525, 3530, 3621 |
| DinI | GGCGCC | 1 cut(s) | 399 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 583, 2757 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 583, 2757 |
| Eam1104I | CTCTTC | 5 cut(s) | 360, 429, 512, 2991, 3646 |
| EarI | CTCTTC | 5 cut(s) | 360, 429, 512, 2991, 3646 |
| EciI | GGCGGA | 2 cut(s) | 698, 1269 |
| Ecl136II | GAGCTC | 1 cut(s) | 3475 |
| Eco130I | CCWWGG | 2 cut(s) | 2089, 2499 |
| Eco147I | AGGCCT | 1 cut(s) | 1056 |
| Eco24I | GRGCYC | 2 cut(s) | 287, 3477 |
| Eco32I | GATATC | 1 cut(s) | 997 |
| Eco47I | GGWCC | 3 cut(s) | 70, 914, 3328 |
| Eco47III | AGCGCT | 1 cut(s) | 973 |
| Eco53kI | GAGCTC | 1 cut(s) | 3475 |
| Eco57I | CTGAAG | 2 cut(s) | 690, 2880 |
| Eco72I | CACGTG | 1 cut(s) | 2935 |
| Eco88I | CYCGRG | 1 cut(s) | 286 |
| Eco91I | GGTNACC | 1 cut(s) | 2053 |
| EcoICRI | GAGCTC | 1 cut(s) | 3475 |
| EcoO65I | GGTNACC | 1 cut(s) | 2053 |
| EcoRI | GAATTC | 1 cut(s) | 1206 |
| EcoRII | CCWGG | 4 cut(s) | 201, 2057, 2913, 3588 |
| EcoRV | GATATC | 1 cut(s) | 997 |
| EcoT14I | CCWWGG | 2 cut(s) | 2089, 2499 |
| EcoT22I | ATGCAT | 2 cut(s) | 1332, 3259 |
| EcoT38I | GRGCYC | 2 cut(s) | 287, 3477 |
| EgeI | GGCGCC | 1 cut(s) | 399 |
| EheI | GGCGCC | 1 cut(s) | 399 |
| ErhI | CCWWGG | 2 cut(s) | 2089, 2499 |
| Esp3I | CGTCTC | 1 cut(s) | 501 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2613, 2645 |
| FaqI | GGGAC | 4 cut(s) | 83, 673, 752, 2344 |
| FauNDI | CATATG | 1 cut(s) | 3498 |
| FbaI | TGATCA | 2 cut(s) | 949, 1036 |
| FblI | GTMKAC | 4 cut(s) | 419, 1443, 2505, 3555 |
| FriOI | GRGCYC | 2 cut(s) | 287, 3477 |
| GlaI | GCGC | 7 cut(s) | 33, 399, 799, 973, 1082, 1311, 2848 |
| GsuI | CTGGAG | 1 cut(s) | 615 |
| HaeII | RGCGCY | 3 cut(s) | 401, 801, 975 |
| HaeIII | GGCC | 3 cut(s) | 26, 1056, 1197 |
| HapII | CCGG | 7 cut(s) | 67, 73, 693, 844, 1029, 1307, 3430 |
| HhaI | GCGC | 7 cut(s) | 34, 400, 800, 974, 1083, 1312, 2849 |
| Hin1I | GRCGYC | 2 cut(s) | 398, 416 |
| Hin6I | GCGC | 7 cut(s) | 32, 398, 798, 972, 1081, 1310, 2847 |
| HinP1I | GCGC | 7 cut(s) | 32, 398, 798, 972, 1081, 1310, 2847 |
| HincII | GTYRAC | 3 cut(s) | 420, 2506, 3178 |
| HindII | GTYRAC | 3 cut(s) | 420, 2506, 3178 |
| HpaII | CCGG | 7 cut(s) | 67, 73, 693, 844, 1029, 1307, 3430 |
| Hpy99I | CGWCG | 1 cut(s) | 421 |
| HpyAV | CCTTC | 5 cut(s) | 411, 1874, 2044, 3279, 3468 |
| HpyCH4IV | ACGT | 4 cut(s) | 416, 1015, 1240, 2934 |
| HpyF3I | CTNAG | 9 cut(s) | 609, 1179, 1220, 1334, 1359, 3449, 3525, 3530, 3621 |
| HpySE526I | ACGT | 4 cut(s) | 416, 1015, 1240, 2934 |
| Hsp92I | GRCGYC | 2 cut(s) | 398, 416 |
| HspAI | GCGC | 7 cut(s) | 32, 398, 798, 972, 1081, 1310, 2847 |
| KasI | GGCGCC | 1 cut(s) | 397 |
| KpnI | GGTACC | 1 cut(s) | 2620 |
| Ksp22I | TGATCA | 2 cut(s) | 949, 1036 |
| MaeII | ACGT | 4 cut(s) | 416, 1015, 1240, 2934 |
| MaeIII | GTNAC | 9 cut(s) | 334, 802, 1011, 1130, 1435, 1945, 2053, 2759, 3296 |
| MfeI | CAATTG | 1 cut(s) | 345 |
| MflI | RGATCY | 3 cut(s) | 1316, 2020, 3661 |
| MhlI | GDGCHC | 4 cut(s) | 287, 1380, 1776, 3477 |
| Mly113I | GGCGCC | 1 cut(s) | 398 |
| MlyI | GAGTC | 4 cut(s) | 695, 734, 779, 2468 |
| MmeI | TCCRAC | 2 cut(s) | 2138, 2402 |
| Mph1103I | ATGCAT | 2 cut(s) | 1332, 3259 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1863, 2164, 2359 |
| MseI | TTAA | 5 cut(s) | 1497, 1629, 1761, 1881, 2631 |
| MslI | CAYNNNNRTG | 4 cut(s) | 158, 1383, 3135, 3563 |
| MspI | CCGG | 7 cut(s) | 67, 73, 693, 844, 1029, 1307, 3430 |
| MspR9I | CCNGG | 7 cut(s) | 68, 203, 693, 1030, 2059, 2915, 3590 |
| MunI | CAATTG | 1 cut(s) | 345 |
| MvaI | CCWGG | 4 cut(s) | 203, 2059, 2915, 3590 |
| MvnI | CGCG | 2 cut(s) | 1081, 2229 |
| NarI | GGCGCC | 1 cut(s) | 398 |
| NciI | CCSGG | 3 cut(s) | 68, 693, 1030 |
| NdeI | CATATG | 1 cut(s) | 3498 |
| NlaIV | GGNNCC | 8 cut(s) | 71, 178, 219, 399, 524, 915, 2618, 3209 |
| NmeAIII | GCCGAG | 1 cut(s) | 374 |
| NmuCI | GTSAC | 6 cut(s) | 334, 1130, 1435, 1945, 2053, 2759 |
| NruI | TCGCGA | 1 cut(s) | 2229 |
| NsiI | ATGCAT | 2 cut(s) | 1332, 3259 |
| NspI | RCATGY | 5 cut(s) | 296, 2760, 2954, 3047, 3562 |
| PaeI | GCATGC | 1 cut(s) | 296 |
| PceI | AGGCCT | 1 cut(s) | 1056 |
| PciI | ACATGT | 3 cut(s) | 2756, 2950, 3043 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1863, 2164, 2359 |
| PfoI | TCCNGGA | 1 cut(s) | 2913 |
| PinAI | ACCGGT | 1 cut(s) | 72 |
| PleI | GAGTC | 4 cut(s) | 694, 734, 778, 2468 |
| PluTI | GGCGCC | 1 cut(s) | 401 |
| PmaCI | CACGTG | 1 cut(s) | 2935 |
| PmlI | CACGTG | 1 cut(s) | 2935 |
| PpsI | GAGTC | 4 cut(s) | 694, 734, 778, 2468 |
| Ppu21I | YACGTR | 2 cut(s) | 1016, 2935 |
| PscI | ACATGT | 3 cut(s) | 2756, 2950, 3043 |
| PsiI | TTATAA | 1 cut(s) | 1070 |
| Psp124BI | GAGCTC | 1 cut(s) | 3477 |
| Psp6I | CCWGG | 4 cut(s) | 201, 2057, 2913, 3588 |
| PspCI | CACGTG | 1 cut(s) | 2935 |
| PspEI | GGTNACC | 1 cut(s) | 2053 |
| PspGI | CCWGG | 4 cut(s) | 201, 2057, 2913, 3588 |
| PspN4I | GGNNCC | 8 cut(s) | 71, 178, 219, 399, 524, 915, 2618, 3209 |
| PspPI | GGNCC | 3 cut(s) | 70, 914, 3328 |
| PstI | CTGCAG | 1 cut(s) | 2398 |
| PstNI | CAGNNNCTG | 2 cut(s) | 593, 2858 |
| PsuI | RGATCY | 3 cut(s) | 1316, 2020, 3661 |
| RruI | TCGCGA | 1 cut(s) | 2229 |
| RseI | CAYNNNNRTG | 4 cut(s) | 158, 1383, 3135, 3563 |
| SacI | GAGCTC | 1 cut(s) | 3477 |
| SalI | GTCGAC | 2 cut(s) | 418, 2504 |
| SaqAI | TTAA | 5 cut(s) | 1497, 1629, 1761, 1881, 2631 |
| Sau96I | GGNCC | 3 cut(s) | 70, 914, 3328 |
| ScaI | AGTACT | 4 cut(s) | 1530, 1662, 1794, 1914 |
| SchI | GAGTC | 4 cut(s) | 695, 734, 779, 2468 |
| ScrFI | CCNGG | 7 cut(s) | 68, 203, 693, 1030, 2059, 2915, 3590 |
| SduI | GDGCHC | 4 cut(s) | 287, 1380, 1776, 3477 |
| SfcI | CTRYAG | 3 cut(s) | 1440, 2199, 2394 |
| SfoI | GGCGCC | 1 cut(s) | 399 |
| SinI | GGWCC | 3 cut(s) | 70, 914, 3328 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 158, 1383, 3135, 3563 |
| SmlI | CTYRAG | 3 cut(s) | 125, 2314, 3487 |
| SmoI | CTYRAG | 3 cut(s) | 125, 2314, 3487 |
| SpeI | ACTAGT | 2 cut(s) | 1352, 1979 |
| SphI | GCATGC | 1 cut(s) | 296 |
| SseBI | AGGCCT | 1 cut(s) | 1056 |
| SsiI | CCGC | 5 cut(s) | 64, 683, 1079, 1165, 1280 |
| SspDI | GGCGCC | 1 cut(s) | 397 |
| SstI | GAGCTC | 1 cut(s) | 3477 |
| StuI | AGGCCT | 1 cut(s) | 1056 |
| StyD4I | CCNGG | 7 cut(s) | 66, 201, 691, 1028, 2057, 2913, 3588 |
| StyI | CCWWGG | 2 cut(s) | 2089, 2499 |
| TaiI | ACGT | 4 cut(s) | 419, 1018, 1243, 2937 |
| TatI | WGTACW | 5 cut(s) | 1528, 1660, 1792, 1912, 3046 |
| Tru1I | TTAA | 5 cut(s) | 1497, 1629, 1761, 1881, 2631 |
| Tru9I | TTAA | 5 cut(s) | 1497, 1629, 1761, 1881, 2631 |
| TseFI | GTSAC | 6 cut(s) | 334, 1130, 1435, 1945, 2053, 2759 |
| Tsp45I | GTSAC | 6 cut(s) | 334, 1130, 1435, 1945, 2053, 2759 |
| TspGWI | ACGGA | 3 cut(s) | 993, 2556, 2599 |
| VneI | GTGCAC | 1 cut(s) | 1376 |
| VpaK11BI | GGWCC | 3 cut(s) | 70, 914, 3328 |
| XapI | RAATTY | 4 cut(s) | 507, 847, 1206, 1343 |
| XceI | RCATGY | 5 cut(s) | 296, 2760, 2954, 3047, 3562 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 481, 2589 |
| XmiI | GTMKAC | 4 cut(s) | 419, 1443, 2505, 3555 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1863, 2164, 2359 |
| ZraI | GACGTC | 1 cut(s) | 417 |
| ZrmI | AGTACT | 4 cut(s) | 1530, 1662, 1794, 1914 |
| Zsp2I | ATGCAT | 2 cut(s) | 1332, 3259 |