Rh5CG171500

GPI-anchored adhesin-like protein PGA55

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0011156
Physical Location & Seq
Forward (+)
16082462 .. 16088635
6174 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG171500.1

Sequence Viewer

Length: 3483 bp
ATGGCATCTTCCCAAGTGGAAATGGCCTCTGCGCCGTTCGGTTGCGTTTTGAGGGATCACAACCGCCGGGACCGGTGCAGAGAGAGCAATGCCAGAGCCACCATAGGTGTTTTGCAGAAGAATCTCAAGAGTTTGGTGAGGGATCATCTCTGCATTGCAGTGTCTTCAAACTCTGGCTCCAATGACAACAACTCCGAGAACCAGGGTCGAAACAAGGAGCCAAACAAGGATGAGAACAGCAACAGAAATGGTGAAAGAGAAGATGGTTCGGGTTCGGTTATGAGCCCGAGGCATGCTAGGGTTCTTGATCGATGGGCTTTCGCAAGACAAATAGTGACGAAACCAATTGAGAGGCAGAGGACAGAAGAGGCAGAGGTGGTTTCTGTGCCGAACTCGGCGCCTTCTTCCACAAGGACGTCGACTTCTGCAAAGGAAGAGACTTTGGCAAGAACAGATAGCTTGGCTGATCTCACCAAAAAAGGCGTGGGGGCTTCGTCTCTGGTTCAAATTTGGGAGAAGAGGCTCCACAAATCAGAATCCCTCAAAACCAATTCCAATGGAAATGTAATATCCGAGACAAGTAGGTCAGATTCTGGAGTTAGCTGCCCTGAGAATGAGAATGAGAATGAGAATGAGAATGTAATAGCTCCCAATGCTTCACCGTCCAGAGTTTCTGAAGCAGAAAAGGCGGAGTCCCCTGGTGAGAAAGCAGGGGATACTATTTTCTCTATTGAAAAAACAGGGGACTCTGTTTTGGATATGGAAAAAGCAAGGGAGTCTATTGATGAAAGCTATGATGCTGGCGCTGTTACCGACATTGAAGATTCTGATAGGATTGCTGTGAATAGCCGGAATTTAGATTCTAAAGAAAAAGAGAAAGTTCGAGTTGTGGATATTATTAGAAGACTGACTGCACAGGGTCCATCGTCCTCTTTGAGTGAGGAAAATGCTAATGATAATGATCAGCAGTTTAGTAGCGCTCACGGATCGCCATGTAGGGATATCCCCCGTGAGCTGTTACGTGATCGGTGTTCCGGGGTTGATCAAGCAGAGCACAGAGGCCTCTCTCATGTTATAAGCTCACCGCGCATCAGAGGGAGGCAGGCATTTGCCGATTTGCTTATGCAGATGGAGCGTGACAGGCATAGGGAACTTGACGCACTGGTAAACCGCAAAACAGTTTCCAAGTTCCCACAGCGAGGCCGAACTCGAATTCAGTCATTACTTAGGCTTCGATTGCTTCAACGTGGTGTGGCATTTGCAGGTACAGATGTGCCACCACTTCCGCCAAAAGCATCTCGTATGAACAAACCGGCGCAAGGATCTAGCATCATGCATCTCAGGGAGAAATTTCGTACTAGTGCTGAGCAGGGTTCAGCAGTGCAGGGTGATGCACCTAATCCAAATAGCCCTCATAAGGAGATCATAAAGAACCAAAGTGTCAATGTAGACAAGTCCTCCACGTCCAATAAGCCCAGTGAAAACACTCCTAATCGAGAAGTTAATGTTATGGAGCAGCAGAAAACATTCCCAGTACTGCGTGCTAGTGAAGATGTTTGTGAAGAAGCGACCCCCAGTTTACACAAATCCTCCACCTCTAATAAGCCTAGTGAAAGCACTCCTAATCGAGAAGTTAATGTTATGGAGCAGCAGAAAGCATCCCCAGTACTGCGTGCTAGTGAAGATGTTTGTGAAGAAGCGACCCAGAGTTTACAGAAATCCTCCACCTCCAAAAAGCCTAGTGAAAGCACTCCTAATCGAGAAGTTAATGTTATGGAGCACCAGAAAACATCCCCAGTACTGCGTGCTAGTGAAGAAGCTATCCCCAGTTTACACAAATCCTCCACCTCCAATAAGCCTAGTGAAAGCCTTCCTAATCGAGAAGTTAATGTTATGGAGCAGCAGAAAACATCCCCAGTACTGCGTGCTAGTGAGGATGTTTGTGAAGAAGTGACCCCCAGTTTAGAAGTTTGCTTCCAAGAAACTAGTTCAGTTTCTCAAAGCACCTTGCCAAATGTTAGTGAAGATCTTGGTGAAGTAGCCAGCCCAAGTCCGAAGGTCACCTGGCAAGACACAAGTTCAGTAGCTAGAAACCTTGGTTCGCAAGAAACTGCTGATCCAACCACACCCATAAATGGTTCAAATGAGAATGAGATATGGAAAGGAAAAGGTTCAGTGGATAGAAACCTTGATTCACAAGAAACTGTAGATTCAACAACATCCTTGAATGGTCGCTATGGGGATGATGAAATATGGAAACCCACAAGTTCAGAGGCTAGATACCTTGATTCACAACAAAGTGCAGATACAAGGAAACCCTTGAGTGGTGGGGATGGGACTGGGAATGAAATATGGAAAGGAACAAATTCAGAGGCTAGAAACCTTGACATACATGAAGCTGCAGATACAACCTCATCCTTGAACGGTTGGAATGAAAATGCGATATGGCATGGAACAAGTTTAGAGGCTAGAAACTTTGACTCACAAGTAGATACAACAACTTCCTTGGTCGACTGGGATGAGAATGATGATGATTACCAGTATTACGGAGAAACAAATTATGACTGGATCAGTGAGATTTCTCGCCCACGGAGCTATTGGGAAGACATTAGGAAATCATGGTACCAAGAGGTGCTTAACTCCAATTCAGAAAAAGGCGAGATACACCAACTCCTTGAAAGAAGAACAGTATCAAACTTTCTTTCTAGTGATTTCCGAGATAGGATAGATAGATTGATGGTATCTCGCATAGAAAGACAAACATGTCACAATGTCAGTCAAGAAGAAGATGACGACGAGAGCAGCTACGATAGAATGAATCAAATGGTGTCTTTCTTACAACAACGTAGCAGCCCACCAGTCACTGAAGAAGCAGAACAAGTGCAAGAACATGTACAGGTACAAGAACAAAACCAAGTCCAAGAACAAGTGCTAGAACATGTGCAAGTCCAAGAACAGGTGCGAGAACATCAAGACCATGAAGACGAGGAGATGACAGAAGAAGAGGAGGAGCAAGAAGAAGTGAAAGAACATGCACAGGTACTAGAACAAAACCAAGTCCAAGAACAAGTGCTAGAACAGGTGCAAGTCCAAGAACAGGTACAAGAACATCAAGACCACAAGGACGAGGGGATGACAGAAGAAGAAGAGGAAGAAGAAAATGATGACAACTACGATGATGATGAAGAATCAAGGAGCCTAATTAGTGGTCAGTTTCAAGAAGCTAGTGATTATTTTGACCGTGCATCATTGCAGCCTTCACCATCTCACTTTACAACATGGAGTTACCAAGATAATGAAGTTGGGGATGATTCGGACCAAGCCACTTCTCCATCTCCTCGCCAACGGTCATCCTTTCCATCTTACTATCCAAATAGTCCACAACTTTCACCATCTCCATCTTACAACACTAATCACCGGCAACATTCTCCCTCCCTCAGTCATCCTTCAATGGTGAGTTTTATCATTTTTATTTTGCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000209 GO:0001654 GO:0001709 GO:0002009 GO:0002064 GO:0002065 GO:0002066 GO:0002165 GO:0002682 GO:0002683 GO:0003002 GO:0003006 GO:0003008 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006464 GO:0006807 GO:0007275 GO:0007276 GO:0007281 GO:0007292 GO:0007389 GO:0007398 GO:0007399 GO:0007422 GO:0007423 GO:0007444 GO:0007472 GO:0007476 GO:0007498 GO:0007552 GO:0007560 GO:0007610 GO:0007611 GO:0007613 GO:0007616 GO:0008052 GO:0008104 GO:0008150 GO:0008152 GO:0008270 GO:0008289 GO:0008356 GO:0008593 GO:0009653 GO:0009791 GO:0009886 GO:0009887 GO:0009888 GO:0009966 GO:0009967 GO:0009987 GO:0010160 GO:0010646 GO:0010647 GO:0016020 GO:0016043 GO:0016360 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019827 GO:0019953 GO:0022008 GO:0022412 GO:0022414 GO:0022603 GO:0022607 GO:0023051 GO:0023056 GO:0030154 GO:0030707 GO:0030718 GO:0030855 GO:0032446 GO:0032501 GO:0032502 GO:0032504 GO:0033036 GO:0035091 GO:0035107 GO:0035114 GO:0035120 GO:0035203 GO:0035204 GO:0035220 GO:0035239 GO:0035295 GO:0036211 GO:0042478 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043412 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0044703 GO:0045165 GO:0045314 GO:0045595 GO:0045596 GO:0045610 GO:0045611 GO:0045613 GO:0045614 GO:0045664 GO:0045747 GO:0046532 GO:0046872 GO:0046914 GO:0048468 GO:0048471 GO:0048477 GO:0048513 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048563 GO:0048569 GO:0048580 GO:0048581 GO:0048583 GO:0048584 GO:0048609 GO:0048645 GO:0048646 GO:0048699 GO:0048707 GO:0048729 GO:0048731 GO:0048736 GO:0048737 GO:0048749 GO:0048856 GO:0048859 GO:0048869 GO:0050767 GO:0050789 GO:0050793 GO:0050794 GO:0050877 GO:0050890 GO:0051093 GO:0051179 GO:0051239 GO:0051241 GO:0051259 GO:0051260 GO:0051301 GO:0051704 GO:0051960 GO:0060284 GO:0060429 GO:0060562 GO:0060581 GO:0060582 GO:0061630 GO:0061659 GO:0065003 GO:0065007 GO:0070647 GO:0071704 GO:0071840 GO:0071944 GO:0098727 GO:0140096 GO:1901564 GO:1901981 GO:1903706 GO:1903707 GO:2000026 GO:2000027
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C3HC4_3

Protein Analysis

1160

Amino Acids

130.19

Weight (kDa)

4.81

Isoelectric Point (pI)

60.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011156)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34920
fragaria_vesca FvH4_3g13290 FvH4_3g13290
malus_domestica MD05G1243100.v1.1 MD10G1225200.v1.1
prunus_persica Prupe.4G120300_v2.0.a1 Prupe.4G120300_v2.0.a1
pyrus_communis pycom10g18910
rosa_chinensis RchiOBHm_Chr5g0021761
rosa_laevigata RLG00000032625
rosa_multiflora Rmu_ssc0000233.1_g000006
rosa_roxburghii Rroxscaffold_1G00056950
rosa_rugosa Rorug05G0069000 Rorug05G0069100 Rorug05G0069200
rosa_samantha Rh5AG157700 Rh5BG157300 Rh5CG171500 Rh5DG157600
rosa_wichuraiana Rw5G014050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1076
AasI GACNNNNNNGTC 2 cut(s) 583, 2763
AatII GACGTC 1 cut(s) 419
Acc36I ACCTGC 1 cut(s) 1253
Acc65I GGTACC 1 cut(s) 2622
AccB1I GGYRCC 2 cut(s) 397, 2622
AccI GTMKAC 3 cut(s) 419, 1449, 2511
AccII CGCG 1 cut(s) 1087
AciI CCGC 5 cut(s) 64, 689, 1085, 1171, 1286
AclWI GGATC 6 cut(s) 63, 150, 994, 1330, 2111, 2576
AcsI RAATTY 5 cut(s) 507, 853, 1212, 1349, 2365
AcuI CTGAAG 2 cut(s) 696, 2886
AcyI GRCGYC 2 cut(s) 398, 416
AfeI AGCGCT 1 cut(s) 979
AfiI CCNNNNNNNGG 7 cut(s) 1199, 1319, 1417, 2135, 2324, 2956, 3097
AflIII ACRYGT 3 cut(s) 2762, 2890, 2938
AgeI ACCGGT 1 cut(s) 72
AhlI ACTAGT 2 cut(s) 1358, 1985
AjiI CACGTC 1 cut(s) 1464
AjnI CCWGG 3 cut(s) 201, 697, 2063
Alw21I GWGCWC 2 cut(s) 1056, 1782
Alw26I GTCTC 3 cut(s) 431, 501, 569
AlwI GGATC 6 cut(s) 63, 150, 994, 1330, 2111, 2576
AlwNI CAGNNNCTG 2 cut(s) 593, 2864
Ama87I CYCGRG 1 cut(s) 286
Aor51HI AGCGCT 1 cut(s) 979
AoxI GGCC 3 cut(s) 24, 1060, 1201
ApeKI GCWGC 8 cut(s) 603, 1516, 1648, 1900, 2399, 2802, 2850, 3253
ApoI RAATTY 5 cut(s) 507, 853, 1212, 1349, 2365
AsiGI ACCGGT 1 cut(s) 72
Asp700I GAANNNNTTC 4 cut(s) 1526, 1869, 2170, 2365
Asp718I GGTACC 1 cut(s) 2622
AspLEI GCGC 6 cut(s) 34, 400, 806, 980, 1089, 1318
AspS9I GGNCC 3 cut(s) 70, 920, 3316
AsuC2I CCSGG 2 cut(s) 68, 1036
AvaI CYCGRG 1 cut(s) 286
AvaII GGWCC 3 cut(s) 70, 920, 3316
BaeI ACNNNNGTAYC 2 cut(s) 1257, 1290
BanI GGYRCC 2 cut(s) 397, 2622
BanII GRGCYC 1 cut(s) 287
BbsI GAAGAC 4 cut(s) 156, 910, 2610, 2988
Bbv12I GWGCWC 2 cut(s) 1056, 1782
BbvI GCAGC 8 cut(s) 590, 1528, 1660, 1912, 2386, 2814, 2862, 3265
BceAI ACGGC 1 cut(s) 19
BciT130I CCWGG 3 cut(s) 203, 699, 2065
BciVI GTATCC 1 cut(s) 709
BclI TGATCA 2 cut(s) 961, 1042
BcnI CCSGG 2 cut(s) 68, 1036
BcoDI GTCTC 3 cut(s) 431, 501, 569
BcuI ACTAGT 2 cut(s) 1358, 1985
BfmI CTRYAG 2 cut(s) 2205, 2400
BfoI RGCGCY 3 cut(s) 401, 807, 981
BfuAI ACCTGC 1 cut(s) 1253
BfuI GTATCC 1 cut(s) 709
BglII AGATCT 1 cut(s) 2026
BisI GCNGC 8 cut(s) 604, 1517, 1649, 1901, 2400, 2803, 2851, 3254
BlpI GCTNAGC 1 cut(s) 1365
BlsI GCNGC 8 cut(s) 605, 1518, 1650, 1902, 2401, 2804, 2852, 3255
BmcAI AGTACT 4 cut(s) 1536, 1668, 1800, 1920
Bme1390I CCNGG 5 cut(s) 68, 203, 699, 1036, 2065
Bme18I GGWCC 3 cut(s) 70, 920, 3316
BmeT110I CYCGRG 1 cut(s) 286
BmgBI CACGTC 1 cut(s) 1464
BmgT120I GGNCC 3 cut(s) 70, 920, 3316
BmiI GGNNCC 8 cut(s) 71, 178, 219, 399, 524, 921, 2624, 3197
BmrFI CCNGG 5 cut(s) 68, 203, 699, 1036, 2065
BmsI GCATC 9 cut(s) 14, 787, 1098, 1304, 1338, 1345, 1381, 1667, 3254
BpiI GAAGAC 4 cut(s) 156, 910, 2610, 2988
BpmI CTGGAG 1 cut(s) 615
Bpu1102I GCTNAGC 1 cut(s) 1365
BpuEI CTTGAG 2 cut(s) 110, 2341
BpuMI CCSGG 2 cut(s) 68, 1036
Bsa29I ATCGAT 1 cut(s) 310
BsaAI YACGTR 1 cut(s) 1022
BsaBI GATNNNNATC 1 cut(s) 960
BsaHI GRCGYC 2 cut(s) 398, 416
BsaJI CCNNGG 7 cut(s) 202, 287, 697, 1035, 2095, 2505, 2588
BsaWI WCCGGW 1 cut(s) 72
Bsc4I CCNNNNNNNGG 7 cut(s) 1199, 1319, 1417, 2135, 2324, 2956, 3097
Bse118I RCCGGY 3 cut(s) 72, 1312, 3417
Bse3DI GCAATG 3 cut(s) 94, 153, 3248
Bse8I GATNNNNATC 1 cut(s) 960
BseBI CCWGG 3 cut(s) 203, 699, 2065
BseCI ATCGAT 1 cut(s) 310
BseDI CCNNGG 7 cut(s) 202, 287, 697, 1035, 2095, 2505, 2588
BseJI GATNNNNATC 1 cut(s) 960
BseLI CCNNNNNNNGG 7 cut(s) 1199, 1319, 1417, 2135, 2324, 2956, 3097
BseMI GCAATG 3 cut(s) 94, 153, 3248
BseMII CTCAG 4 cut(s) 600, 1354, 1356, 3451
BseRI GAGGAG 4 cut(s) 3002, 3020, 3023, 3327
BseXI GCAGC 8 cut(s) 590, 1528, 1660, 1912, 2386, 2814, 2862, 3265
BsgI GTGCAG 4 cut(s) 97, 897, 1403, 2322
Bsh1236I CGCG 1 cut(s) 1087
BshFI GGCC 3 cut(s) 26, 1062, 1203
BshNI GGYRCC 2 cut(s) 397, 2622
BshTI ACCGGT 1 cut(s) 72
BshVI ATCGAT 1 cut(s) 310
BsiHKAI GWGCWC 2 cut(s) 1056, 1782
BsiHKCI CYCGRG 1 cut(s) 286
BsiSI CCGG 6 cut(s) 67, 73, 850, 1035, 1313, 3418
BslFI GGGAC 4 cut(s) 83, 679, 758, 2350
BslI CCNNNNNNNGG 7 cut(s) 1199, 1319, 1417, 2135, 2324, 2956, 3097
BsmAI GTCTC 3 cut(s) 431, 501, 569
BsmBI CGTCTC 1 cut(s) 501
BsmFI GGGAC 4 cut(s) 83, 679, 758, 2350
BsnI GGCC 3 cut(s) 26, 1062, 1203
BsoBI CYCGRG 1 cut(s) 286
Bsp1286I GDGCHC 3 cut(s) 287, 1056, 1782
Bsp1407I TGTACA 1 cut(s) 2893
Bsp1720I GCTNAGC 1 cut(s) 1365
BspACI CCGC 5 cut(s) 64, 689, 1085, 1171, 1286
BspANI GGCC 3 cut(s) 26, 1062, 1203
BspCNI CTCAG 4 cut(s) 601, 1353, 1357, 3450
BspDI ATCGAT 1 cut(s) 310
BspFNI CGCG 1 cut(s) 1087
BspLI GGNNCC 8 cut(s) 71, 178, 219, 399, 524, 921, 2624, 3197
BspMAI CTGCAG 1 cut(s) 2404
BspMI ACCTGC 1 cut(s) 1253
BspPI GGATC 6 cut(s) 63, 150, 994, 1330, 2111, 2576
BspT107I GGYRCC 2 cut(s) 397, 2622
BsrDI GCAATG 3 cut(s) 94, 153, 3248
BsrFI RCCGGY 3 cut(s) 72, 1312, 3417
BsrGI TGTACA 1 cut(s) 2893
BssAI RCCGGY 3 cut(s) 72, 1312, 3417
BssECI CCNNGG 7 cut(s) 202, 287, 697, 1035, 2095, 2505, 2588
BssNI GRCGYC 2 cut(s) 398, 416
BssT1I CCWWGG 2 cut(s) 2095, 2505
Bst2UI CCWGG 3 cut(s) 203, 699, 2065
Bst4CI ACNGT 7 cut(s) 663, 1180, 2206, 2426, 2689, 3242, 3348
Bst6I CTCTTC 5 cut(s) 360, 429, 512, 2997, 3141
BstACI GRCGYC 2 cut(s) 398, 416
BstAUI TGTACA 1 cut(s) 2893
BstBAI YACGTR 1 cut(s) 1022
BstC8I GCNNGC 8 cut(s) 294, 802, 1104, 1542, 1674, 1806, 1926, 2044
BstDEI CTNAG 5 cut(s) 609, 1226, 1340, 1365, 3437
BstDSI CCRYGG 1 cut(s) 2588
BstEII GGTNACC 1 cut(s) 2059
BstFNI CGCG 1 cut(s) 1087
BstH2I RGCGCY 3 cut(s) 401, 807, 981
BstHHI GCGC 6 cut(s) 34, 400, 806, 980, 1089, 1318
BstMAI GTCTC 3 cut(s) 431, 501, 569
BstMWI GCNNNNNNNGC 8 cut(s) 84, 653, 686, 1086, 1132, 1141, 1237, 2592
BstNI CCWGG 3 cut(s) 203, 699, 2065
BstNSI RCATGY 5 cut(s) 296, 2766, 2894, 2942, 3035
BstPI GGTNACC 1 cut(s) 2059
BstSCI CCNGG 5 cut(s) 66, 201, 697, 1034, 2063
BstSFI CTRYAG 2 cut(s) 2205, 2400
BstUI CGCG 1 cut(s) 1087
BstV1I GCAGC 8 cut(s) 590, 1528, 1660, 1912, 2386, 2814, 2862, 3265
BstV2I GAAGAC 4 cut(s) 156, 910, 2610, 2988
BstX2I RGATCY 2 cut(s) 1322, 2026
BstYI RGATCY 2 cut(s) 1322, 2026
Bsu15I ATCGAT 1 cut(s) 310
BsuI GTATCC 1 cut(s) 709
BsuRI GGCC 3 cut(s) 26, 1062, 1203
BsuTUI ATCGAT 1 cut(s) 310
BtgI CCRYGG 1 cut(s) 2588
BtrI CACGTC 1 cut(s) 1464
BtsI GCAGTG 2 cut(s) 165, 1386
BtsIMutI CAGTG 7 cut(s) 165, 1160, 1386, 1483, 2181, 2578, 2862
BveI ACCTGC 1 cut(s) 1253
Cac8I GCNNGC 8 cut(s) 294, 802, 1104, 1542, 1674, 1806, 1926, 2044
CaiI CAGNNNCTG 2 cut(s) 593, 2864
CfoI GCGC 6 cut(s) 34, 400, 806, 980, 1089, 1318
Cfr10I RCCGGY 3 cut(s) 72, 1312, 3417
Cfr13I GGNCC 3 cut(s) 70, 920, 3316
ClaI ATCGAT 1 cut(s) 310
CseI GACGC 1 cut(s) 1166
CspAI ACCGGT 1 cut(s) 72
DdeI CTNAG 5 cut(s) 609, 1226, 1340, 1365, 3437
DinI GGCGCC 1 cut(s) 399
DrdI GACNNNNNNGTC 2 cut(s) 583, 2763
DseDI GACNNNNNNGTC 2 cut(s) 583, 2763
Eam1104I CTCTTC 5 cut(s) 360, 429, 512, 2997, 3141
EarI CTCTTC 5 cut(s) 360, 429, 512, 2997, 3141
EciI GGCGGA 2 cut(s) 704, 1275
Eco130I CCWWGG 2 cut(s) 2095, 2505
Eco147I AGGCCT 1 cut(s) 1062
Eco24I GRGCYC 1 cut(s) 287
Eco32I GATATC 1 cut(s) 1003
Eco47I GGWCC 3 cut(s) 70, 920, 3316
Eco47III AGCGCT 1 cut(s) 979
Eco57I CTGAAG 2 cut(s) 696, 2886
Eco88I CYCGRG 1 cut(s) 286
Eco91I GGTNACC 1 cut(s) 2059
EcoO65I GGTNACC 1 cut(s) 2059
EcoRI GAATTC 1 cut(s) 1212
EcoRII CCWGG 3 cut(s) 201, 697, 2063
EcoRV GATATC 1 cut(s) 1003
EcoT14I CCWWGG 2 cut(s) 2095, 2505
EcoT22I ATGCAT 1 cut(s) 1338
EcoT38I GRGCYC 1 cut(s) 287
EgeI GGCGCC 1 cut(s) 399
EheI GGCGCC 1 cut(s) 399
ErhI CCWWGG 2 cut(s) 2095, 2505
Esp3I CGTCTC 1 cut(s) 501
FalI AAGNNNNNCTT 2 cut(s) 2619, 2651
FaqI GGGAC 4 cut(s) 83, 679, 758, 2350
FbaI TGATCA 2 cut(s) 961, 1042
FblI GTMKAC 3 cut(s) 419, 1449, 2511
Fnu4HI GCNGC 8 cut(s) 604, 1517, 1649, 1901, 2400, 2803, 2851, 3254
FriOI GRGCYC 1 cut(s) 287
Fsp4HI GCNGC 8 cut(s) 604, 1517, 1649, 1901, 2400, 2803, 2851, 3254
GlaI GCGC 6 cut(s) 33, 399, 805, 979, 1088, 1317
GluI GCNGC 8 cut(s) 604, 1517, 1649, 1901, 2400, 2803, 2851, 3254
GsuI CTGGAG 1 cut(s) 615
HaeII RGCGCY 3 cut(s) 401, 807, 981
HaeIII GGCC 3 cut(s) 26, 1062, 1203
HapII CCGG 6 cut(s) 67, 73, 850, 1035, 1313, 3418
HgaI GACGC 1 cut(s) 1166
HhaI GCGC 6 cut(s) 34, 400, 806, 980, 1089, 1318
Hin1I GRCGYC 2 cut(s) 398, 416
Hin6I GCGC 6 cut(s) 32, 398, 804, 978, 1087, 1316
HinP1I GCGC 6 cut(s) 32, 398, 804, 978, 1087, 1316
HincII GTYRAC 2 cut(s) 420, 2512
HindII GTYRAC 2 cut(s) 420, 2512
HpaII CCGG 6 cut(s) 67, 73, 850, 1035, 1313, 3418
Hpy166II GTNNAC 8 cut(s) 420, 1168, 1450, 1580, 1712, 1832, 2512, 3380
Hpy8I GTNNAC 8 cut(s) 420, 1168, 1450, 1580, 1712, 1832, 2512, 3380
Hpy99I CGWCG 2 cut(s) 421, 2798
HpyAV CCTTC 5 cut(s) 411, 1880, 2050, 3267, 3456
HpyCH4III ACNGT 7 cut(s) 663, 1180, 2206, 2426, 2689, 3242, 3348
HpyCH4IV ACGT 5 cut(s) 416, 1021, 1246, 1463, 2845
HpyF10VI GCNNNNNNNGC 8 cut(s) 84, 653, 686, 1086, 1132, 1141, 1237, 2592
HpyF3I CTNAG 5 cut(s) 609, 1226, 1340, 1365, 3437
HpySE526I ACGT 5 cut(s) 416, 1021, 1246, 1463, 2845
Hsp92I GRCGYC 2 cut(s) 398, 416
HspAI GCGC 6 cut(s) 32, 398, 804, 978, 1087, 1316
KasI GGCGCC 1 cut(s) 397
KpnI GGTACC 1 cut(s) 2626
Ksp22I TGATCA 2 cut(s) 961, 1042
Lsp1109I GCAGC 8 cut(s) 590, 1528, 1660, 1912, 2386, 2814, 2862, 3265
LweI GCATC 9 cut(s) 14, 787, 1098, 1304, 1338, 1345, 1381, 1667, 3254
MaeII ACGT 5 cut(s) 416, 1021, 1246, 1463, 2845
MaeIII GTNAC 9 cut(s) 334, 808, 1017, 1136, 1951, 2059, 2765, 2860, 3284
MfeI CAATTG 1 cut(s) 345
MflI RGATCY 2 cut(s) 1322, 2026
MhlI GDGCHC 3 cut(s) 287, 1056, 1782
Mly113I GGCGCC 1 cut(s) 398
MlyI GAGTC 4 cut(s) 701, 740, 785, 2474
MmeI TCCRAC 2 cut(s) 2144, 2408
Mph1103I ATGCAT 1 cut(s) 1338
MroXI GAANNNNTTC 4 cut(s) 1526, 1869, 2170, 2365
MseI TTAA 6 cut(s) 1503, 1635, 1767, 1887, 2637, 3481
MslI CAYNNNNRTG 1 cut(s) 158
MspI CCGG 6 cut(s) 67, 73, 850, 1035, 1313, 3418
MspR9I CCNGG 5 cut(s) 68, 203, 699, 1036, 2065
MunI CAATTG 1 cut(s) 345
MvaI CCWGG 3 cut(s) 203, 699, 2065
MvnI CGCG 1 cut(s) 1087
MwoI GCNNNNNNNGC 8 cut(s) 84, 653, 686, 1086, 1132, 1141, 1237, 2592
NarI GGCGCC 1 cut(s) 398
NciI CCSGG 2 cut(s) 68, 1036
NlaIV GGNNCC 8 cut(s) 71, 178, 219, 399, 524, 921, 2624, 3197
NmeAIII GCCGAG 1 cut(s) 374
NmuCI GTSAC 6 cut(s) 334, 1136, 1951, 2059, 2765, 2860
NsiI ATGCAT 1 cut(s) 1338
NspI RCATGY 5 cut(s) 296, 2766, 2894, 2942, 3035
PaeI GCATGC 1 cut(s) 296
PceI AGGCCT 1 cut(s) 1062
PciI ACATGT 3 cut(s) 2762, 2890, 2938
PdmI GAANNNNTTC 4 cut(s) 1526, 1869, 2170, 2365
PinAI ACCGGT 1 cut(s) 72
PkrI GCNGC 8 cut(s) 605, 1518, 1650, 1902, 2401, 2804, 2852, 3255
PleI GAGTC 4 cut(s) 700, 740, 784, 2474
PluTI GGCGCC 1 cut(s) 401
PpsI GAGTC 4 cut(s) 700, 740, 784, 2474
Ppu21I YACGTR 1 cut(s) 1022
PscI ACATGT 3 cut(s) 2762, 2890, 2938
PsiI TTATAA 1 cut(s) 1076
Psp6I CCWGG 3 cut(s) 201, 697, 2063
PspEI GGTNACC 1 cut(s) 2059
PspGI CCWGG 3 cut(s) 201, 697, 2063
PspN4I GGNNCC 8 cut(s) 71, 178, 219, 399, 524, 921, 2624, 3197
PspPI GGNCC 3 cut(s) 70, 920, 3316
PstI CTGCAG 1 cut(s) 2404
PstNI CAGNNNCTG 2 cut(s) 593, 2864
PsuI RGATCY 2 cut(s) 1322, 2026
RseI CAYNNNNRTG 1 cut(s) 158
SalI GTCGAC 2 cut(s) 418, 2510
SaqAI TTAA 6 cut(s) 1503, 1635, 1767, 1887, 2637, 3481
SatI GCNGC 8 cut(s) 604, 1517, 1649, 1901, 2400, 2803, 2851, 3254
Sau96I GGNCC 3 cut(s) 70, 920, 3316
ScaI AGTACT 4 cut(s) 1536, 1668, 1800, 1920
SchI GAGTC 4 cut(s) 701, 740, 785, 2474
ScrFI CCNGG 5 cut(s) 68, 203, 699, 1036, 2065
SduI GDGCHC 3 cut(s) 287, 1056, 1782
SfaNI GCATC 9 cut(s) 14, 787, 1098, 1304, 1338, 1345, 1381, 1667, 3254
SfcI CTRYAG 2 cut(s) 2205, 2400
SfoI GGCGCC 1 cut(s) 399
SinI GGWCC 3 cut(s) 70, 920, 3316
SmiMI CAYNNNNRTG 1 cut(s) 158
SmlI CTYRAG 2 cut(s) 125, 2320
SmoI CTYRAG 2 cut(s) 125, 2320
SpeI ACTAGT 2 cut(s) 1358, 1985
SphI GCATGC 1 cut(s) 296
SseBI AGGCCT 1 cut(s) 1062
SsiI CCGC 5 cut(s) 64, 689, 1085, 1171, 1286
SspDI GGCGCC 1 cut(s) 397
StuI AGGCCT 1 cut(s) 1062
StyD4I CCNGG 5 cut(s) 66, 201, 697, 1034, 2063
StyI CCWWGG 2 cut(s) 2095, 2505
TaaI ACNGT 7 cut(s) 663, 1180, 2206, 2426, 2689, 3242, 3348
TaiI ACGT 5 cut(s) 419, 1024, 1249, 1466, 2848
TatI WGTACW 5 cut(s) 1534, 1666, 1798, 1918, 2893
Tru1I TTAA 6 cut(s) 1503, 1635, 1767, 1887, 2637, 3481
Tru9I TTAA 6 cut(s) 1503, 1635, 1767, 1887, 2637, 3481
TscAI CASTG 7 cut(s) 165, 1167, 1386, 1483, 2181, 2578, 2869
TseFI GTSAC 6 cut(s) 334, 1136, 1951, 2059, 2765, 2860
TseI GCWGC 8 cut(s) 603, 1516, 1648, 1900, 2399, 2802, 2850, 3253
Tsp45I GTSAC 6 cut(s) 334, 1136, 1951, 2059, 2765, 2860
TspGWI ACGGA 3 cut(s) 999, 2562, 2605
TspRI CASTG 7 cut(s) 165, 1167, 1386, 1483, 2181, 2578, 2869
VpaK11BI GGWCC 3 cut(s) 70, 920, 3316
XapI RAATTY 5 cut(s) 507, 853, 1212, 1349, 2365
XceI RCATGY 5 cut(s) 296, 2766, 2894, 2942, 3035
XcmI CCANNNNNNNNNTGG 2 cut(s) 481, 2595
XmiI GTMKAC 3 cut(s) 419, 1449, 2511
XmnI GAANNNNTTC 4 cut(s) 1526, 1869, 2170, 2365
ZraI GACGTC 1 cut(s) 417
ZrmI AGTACT 4 cut(s) 1536, 1668, 1800, 1920
Zsp2I ATGCAT 1 cut(s) 1338
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.