Belongs to the argonaute family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G27040 AT2G27040 |
| fragaria_vesca | FvH4_3g27260 FvH4_3g27260 FvH4_3g27260 FvH4_3g27260 FvH4_3g27260 FvH4_3g27260 |
| malus_domestica | MD03G1164000.v1.1 MD11G1182100.v1.1 |
| prunus_persica | Prupe.6G154800_v2.0.a1 Prupe.6G154800_v2.0.a1 Prupe.6G154800_v2.0.a1 Prupe.6G154800_v2.0.a1 |
| pyrus_communis | pycom03g11750 pycom11g15700 |
| rosa_chinensis | RchiOBHm_Chr5g0049901 |
| rosa_laevigata | RLG00000034661 |
| rosa_roxburghii | Rroxscaffold_1G00031470 |
| rosa_rugosa | Rorug05G0253700 |
| rosa_samantha | Rh5AG328500 Rh5BG339100 Rh5CG364700 Rh5DG351500 |
| rosa_wichuraiana | Rw5G031030 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 2 cut(s) | 1430, 1505 |
| AccB1I | GGYRCC | 3 cut(s) | 1344, 1430, 1505 |
| AccI | GTMKAC | 1 cut(s) | 545 |
| AccII | CGCG | 1 cut(s) | 1055 |
| AciI | CCGC | 6 cut(s) | 784, 855, 1053, 1055, 1090, 1754 |
| AclWI | GGATC | 3 cut(s) | 347, 1242, 1311 |
| AcoI | YGGCCR | 3 cut(s) | 1027, 1076, 1782 |
| AcsI | RAATTY | 7 cut(s) | 790, 915, 931, 1352, 1391, 1449, 1685 |
| AcuI | CTGAAG | 1 cut(s) | 1790 |
| AdeI | CACNNNGTG | 1 cut(s) | 863 |
| AfaI | GTAC | 4 cut(s) | 1432, 1507, 1601, 1612 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 779, 780, 1003, 1095, 1096 |
| AgeI | ACCGGT | 1 cut(s) | 313 |
| AhlI | ACTAGT | 1 cut(s) | 1576 |
| AjnI | CCWGG | 4 cut(s) | 307, 1024, 1426, 1763 |
| AleI | CACNNNNGTG | 1 cut(s) | 710 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1102, 1134 |
| AluBI | AGCT | 5 cut(s) | 517, 1065, 1192, 1559, 1759 |
| AluI | AGCT | 5 cut(s) | 517, 1065, 1192, 1559, 1759 |
| Alw21I | GWGCWC | 1 cut(s) | 1489 |
| Alw26I | GTCTC | 4 cut(s) | 1122, 1275, 1507, 1697 |
| Alw44I | GTGCAC | 1 cut(s) | 1485 |
| AlwI | GGATC | 3 cut(s) | 347, 1242, 1311 |
| Ama87I | CYCGRG | 1 cut(s) | 1066 |
| AoxI | GGCC | 6 cut(s) | 208, 718, 1027, 1076, 1491, 1782 |
| ApaLI | GTGCAC | 1 cut(s) | 1485 |
| ApeKI | GCWGC | 3 cut(s) | 1192, 1658, 1756 |
| ApoI | RAATTY | 7 cut(s) | 790, 915, 931, 1352, 1391, 1449, 1685 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 249, 281 |
| AseI | ATTAAT | 1 cut(s) | 474 |
| AsiGI | ACCGGT | 1 cut(s) | 313 |
| Asp718I | GGTACC | 2 cut(s) | 1430, 1505 |
| AspA2I | CCTAGG | 1 cut(s) | 997 |
| AspLEI | GCGC | 1 cut(s) | 189 |
| AspS9I | GGNCC | 1 cut(s) | 311 |
| AsuHPI | GGTGA | 3 cut(s) | 671, 1372, 1401 |
| AsuII | TTCGAA | 1 cut(s) | 1108 |
| AvaI | CYCGRG | 1 cut(s) | 1066 |
| AvaII | GGWCC | 1 cut(s) | 311 |
| AvrII | CCTAGG | 1 cut(s) | 997 |
| BaeGI | GKGCMC | 2 cut(s) | 1349, 1489 |
| BalI | TGGCCA | 3 cut(s) | 1029, 1078, 1784 |
| BanI | GGYRCC | 3 cut(s) | 1344, 1430, 1505 |
| BanII | GRGCYC | 1 cut(s) | 18 |
| BauI | CACGAG | 2 cut(s) | 809, 1510 |
| Bbv12I | GWGCWC | 1 cut(s) | 1489 |
| BbvI | GCAGC | 3 cut(s) | 1179, 1645, 1768 |
| BccI | CCATC | 9 cut(s) | 14, 374, 383, 650, 828, 997, 998, 1051, 1250 |
| BceAI | ACGGC | 1 cut(s) | 705 |
| BciT130I | CCWGG | 4 cut(s) | 309, 1026, 1428, 1765 |
| BcoDI | GTCTC | 4 cut(s) | 1122, 1275, 1507, 1697 |
| BcuI | ACTAGT | 1 cut(s) | 1576 |
| BfaI | CTAG | 3 cut(s) | 201, 998, 1577 |
| BfmI | CTRYAG | 3 cut(s) | 1093, 1568, 1626 |
| BglII | AGATCT | 1 cut(s) | 572 |
| BisI | GCNGC | 4 cut(s) | 1053, 1193, 1659, 1757 |
| BlnI | CCTAGG | 1 cut(s) | 997 |
| BlsI | GCNGC | 4 cut(s) | 1054, 1194, 1660, 1758 |
| Bme1390I | CCNGG | 4 cut(s) | 309, 1026, 1428, 1765 |
| Bme18I | GGWCC | 1 cut(s) | 311 |
| BmeT110I | CYCGRG | 1 cut(s) | 1066 |
| BmgT120I | GGNCC | 1 cut(s) | 311 |
| BmiI | GGNNCC | 4 cut(s) | 984, 1346, 1432, 1507 |
| BmrFI | CCNGG | 4 cut(s) | 309, 1026, 1428, 1765 |
| BmsI | GCATC | 3 cut(s) | 1109, 1684, 1706 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1504, 1536, 1694, 1726 |
| BpmI | CTGGAG | 1 cut(s) | 1758 |
| Bpu14I | TTCGAA | 1 cut(s) | 1108 |
| BpuEI | CTTGAG | 4 cut(s) | 129, 533, 693, 1696 |
| Bsa29I | ATCGAT | 1 cut(s) | 1046 |
| BsaAI | YACGTR | 1 cut(s) | 674 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1476 |
| BsaI | GGTCTC | 1 cut(s) | 1507 |
| BsaJI | CCNNGG | 6 cut(s) | 211, 978, 997, 1053, 1717, 1763 |
| BsaWI | WCCGGW | 2 cut(s) | 313, 1231 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1102, 1132 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 779, 780, 1003, 1095, 1096 |
| Bse118I | RCCGGY | 1 cut(s) | 313 |
| Bse1I | ACTGG | 5 cut(s) | 374, 585, 1030, 1305, 1748 |
| Bse3DI | GCAATG | 3 cut(s) | 92, 134, 760 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1476 |
| BseBI | CCWGG | 4 cut(s) | 309, 1026, 1428, 1765 |
| BseCI | ATCGAT | 1 cut(s) | 1046 |
| BseDI | CCNNGG | 6 cut(s) | 211, 978, 997, 1053, 1717, 1763 |
| BseGI | GGATG | 9 cut(s) | 385, 394, 621, 766, 993, 1008, 1012, 1261, 1456 |
| BseJI | GATNNNNATC | 1 cut(s) | 1476 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 779, 780, 1003, 1095, 1096 |
| BseMI | GCAATG | 3 cut(s) | 92, 134, 760 |
| BseMII | CTCAG | 4 cut(s) | 1127, 1385, 1418, 1692 |
| BseNI | ACTGG | 5 cut(s) | 374, 585, 1030, 1305, 1748 |
| BseSI | GKGCMC | 2 cut(s) | 1349, 1489 |
| BseXI | GCAGC | 3 cut(s) | 1179, 1645, 1768 |
| Bsh1236I | CGCG | 1 cut(s) | 1055 |
| BshFI | GGCC | 6 cut(s) | 210, 720, 1029, 1078, 1493, 1784 |
| BshNI | GGYRCC | 3 cut(s) | 1344, 1430, 1505 |
| BshTI | ACCGGT | 1 cut(s) | 313 |
| BshVI | ATCGAT | 1 cut(s) | 1046 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1489 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1066 |
| BsiSI | CCGG | 3 cut(s) | 314, 1232, 1494 |
| BslFI | GGGAC | 1 cut(s) | 1736 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 779, 780, 1003, 1095, 1096 |
| BsmAI | GTCTC | 4 cut(s) | 1122, 1275, 1507, 1697 |
| BsmFI | GGGAC | 1 cut(s) | 1736 |
| BsmI | GAATGC | 1 cut(s) | 1582 |
| BsnI | GGCC | 6 cut(s) | 210, 720, 1029, 1078, 1493, 1784 |
| Bso31I | GGTCTC | 1 cut(s) | 1507 |
| BsoBI | CYCGRG | 1 cut(s) | 1066 |
| Bsp119I | TTCGAA | 1 cut(s) | 1108 |
| Bsp1286I | GDGCHC | 3 cut(s) | 18, 1349, 1489 |
| Bsp143I | GATC | 8 cut(s) | 286, 352, 460, 572, 865, 1234, 1303, 1564 |
| Bsp19I | CCATGG | 1 cut(s) | 1717 |
| BspACI | CCGC | 6 cut(s) | 784, 855, 1053, 1055, 1090, 1754 |
| BspANI | GGCC | 6 cut(s) | 210, 720, 1029, 1078, 1493, 1784 |
| BspCNI | CTCAG | 4 cut(s) | 1126, 1384, 1417, 1693 |
| BspDI | ATCGAT | 1 cut(s) | 1046 |
| BspFNI | CGCG | 1 cut(s) | 1055 |
| BspLI | GGNNCC | 4 cut(s) | 984, 1346, 1432, 1507 |
| BspMAI | CTGCAG | 1 cut(s) | 1572 |
| BspPI | GGATC | 3 cut(s) | 347, 1242, 1311 |
| BspT104I | TTCGAA | 1 cut(s) | 1108 |
| BspT107I | GGYRCC | 3 cut(s) | 1344, 1430, 1505 |
| BspTNI | GGTCTC | 1 cut(s) | 1507 |
| BsrDI | GCAATG | 3 cut(s) | 92, 134, 760 |
| BsrFI | RCCGGY | 1 cut(s) | 313 |
| BsrI | ACTGG | 5 cut(s) | 374, 585, 1030, 1305, 1748 |
| BssAI | RCCGGY | 1 cut(s) | 313 |
| BssECI | CCNNGG | 6 cut(s) | 211, 978, 997, 1053, 1717, 1763 |
| BssMI | GATC | 8 cut(s) | 286, 352, 460, 572, 865, 1234, 1303, 1564 |
| BssNAI | GTATAC | 1 cut(s) | 546 |
| BssSI | CACGAG | 2 cut(s) | 809, 1510 |
| BssT1I | CCWWGG | 4 cut(s) | 211, 978, 997, 1717 |
| Bst1107I | GTATAC | 1 cut(s) | 546 |
| Bst2BI | CACGAG | 2 cut(s) | 809, 1510 |
| Bst2UI | CCWGG | 4 cut(s) | 309, 1026, 1428, 1765 |
| Bst4CI | ACNGT | 4 cut(s) | 409, 444, 543, 1146 |
| Bst6I | CTCTTC | 1 cut(s) | 570 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 89 |
| BstBAI | YACGTR | 1 cut(s) | 674 |
| BstBI | TTCGAA | 1 cut(s) | 1108 |
| BstC8I | GCNNGC | 4 cut(s) | 141, 732, 859, 1321 |
| BstDEI | CTNAG | 5 cut(s) | 822, 1113, 1371, 1404, 1701 |
| BstDSI | CCRYGG | 2 cut(s) | 1053, 1717 |
| BstF5I | GGATG | 9 cut(s) | 385, 394, 621, 766, 993, 1008, 1012, 1261, 1456 |
| BstFNI | CGCG | 1 cut(s) | 1055 |
| BstHHI | GCGC | 1 cut(s) | 189 |
| BstKTI | GATC | 8 cut(s) | 289, 355, 463, 575, 868, 1237, 1306, 1567 |
| BstMAI | GTCTC | 4 cut(s) | 1122, 1275, 1507, 1697 |
| BstMBI | GATC | 8 cut(s) | 286, 352, 460, 572, 865, 1234, 1303, 1564 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 89, 1026, 1655, 1753, 1765 |
| BstNI | CCWGG | 4 cut(s) | 309, 1026, 1428, 1765 |
| BstNSI | RCATGY | 3 cut(s) | 92, 681, 1323 |
| BstSCI | CCNGG | 4 cut(s) | 307, 1024, 1426, 1763 |
| BstSFI | CTRYAG | 3 cut(s) | 1093, 1568, 1626 |
| BstSLI | GKGCMC | 2 cut(s) | 1349, 1489 |
| BstUI | CGCG | 1 cut(s) | 1055 |
| BstV1I | GCAGC | 3 cut(s) | 1179, 1645, 1768 |
| BstX2I | RGATCY | 2 cut(s) | 352, 572 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 970 |
| BstYI | RGATCY | 2 cut(s) | 352, 572 |
| BstZ17I | GTATAC | 1 cut(s) | 546 |
| Bsu15I | ATCGAT | 1 cut(s) | 1046 |
| BsuRI | GGCC | 6 cut(s) | 210, 720, 1029, 1078, 1493, 1784 |
| BsuTUI | ATCGAT | 1 cut(s) | 1046 |
| BtgI | CCRYGG | 2 cut(s) | 1053, 1717 |
| BtgZI | GCGATG | 1 cut(s) | 416 |
| BtsCI | GGATG | 9 cut(s) | 385, 394, 621, 766, 993, 1008, 1012, 1261, 1456 |
| BtsI | GCAGTG | 2 cut(s) | 1614, 1749 |
| BtsIMutI | CAGTG | 4 cut(s) | 578, 1142, 1614, 1749 |
| Cac8I | GCNNGC | 4 cut(s) | 141, 732, 859, 1321 |
| CfoI | GCGC | 1 cut(s) | 189 |
| Cfr10I | RCCGGY | 1 cut(s) | 313 |
| Cfr13I | GGNCC | 1 cut(s) | 311 |
| Cfr42I | CCGCGG | 1 cut(s) | 1056 |
| ClaI | ATCGAT | 1 cut(s) | 1046 |
| CseI | GACGC | 1 cut(s) | 482 |
| CsiI | ACCWGGT | 1 cut(s) | 1426 |
| Csp6I | GTAC | 4 cut(s) | 1431, 1506, 1600, 1611 |
| CspAI | ACCGGT | 1 cut(s) | 313 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1338, 1373 |
| CviAII | CATG | 7 cut(s) | 89, 678, 1016, 1320, 1529, 1718, 1792 |
| CviQI | GTAC | 4 cut(s) | 1431, 1506, 1600, 1611 |
| DdeI | CTNAG | 5 cut(s) | 822, 1113, 1371, 1404, 1701 |
| DpnI | GATC | 8 cut(s) | 288, 354, 462, 574, 867, 1236, 1305, 1566 |
| DpnII | GATC | 8 cut(s) | 286, 352, 460, 572, 865, 1234, 1303, 1564 |
| DraI | TTTAAA | 1 cut(s) | 171 |
| DraIII | CACNNNGTG | 1 cut(s) | 863 |
| EaeI | YGGCCR | 3 cut(s) | 1027, 1076, 1782 |
| Eam1104I | CTCTTC | 1 cut(s) | 570 |
| EarI | CTCTTC | 1 cut(s) | 570 |
| Eco130I | CCWWGG | 4 cut(s) | 211, 978, 997, 1717 |
| Eco147I | AGGCCT | 1 cut(s) | 210 |
| Eco24I | GRGCYC | 1 cut(s) | 18 |
| Eco31I | GGTCTC | 1 cut(s) | 1507 |
| Eco47I | GGWCC | 1 cut(s) | 311 |
| Eco57I | CTGAAG | 1 cut(s) | 1790 |
| Eco88I | CYCGRG | 1 cut(s) | 1066 |
| EcoRI | GAATTC | 1 cut(s) | 915 |
| EcoRII | CCWGG | 4 cut(s) | 307, 1024, 1426, 1763 |
| EcoT14I | CCWWGG | 4 cut(s) | 211, 978, 997, 1717 |
| EcoT22I | ATGCAT | 2 cut(s) | 94, 1699 |
| EcoT38I | GRGCYC | 1 cut(s) | 18 |
| ErhI | CCWWGG | 4 cut(s) | 211, 978, 997, 1717 |
| FaeI | CATG | 7 cut(s) | 92, 681, 1019, 1323, 1532, 1721, 1795 |
| FaqI | GGGAC | 1 cut(s) | 1736 |
| FatI | CATG | 7 cut(s) | 88, 677, 1015, 1319, 1528, 1717, 1791 |
| FauI | CCCGC | 2 cut(s) | 1097, 1761 |
| FblI | GTMKAC | 1 cut(s) | 545 |
| Fnu4HI | GCNGC | 4 cut(s) | 1053, 1193, 1659, 1757 |
| FokI | GGATG | 9 cut(s) | 392, 401, 628, 773, 980, 1015, 1019, 1268, 1443 |
| FriOI | GRGCYC | 1 cut(s) | 18 |
| Fsp4HI | GCNGC | 4 cut(s) | 1053, 1193, 1659, 1757 |
| FspBI | CTAG | 3 cut(s) | 201, 998, 1577 |
| GlaI | GCGC | 1 cut(s) | 188 |
| GluI | GCNGC | 4 cut(s) | 1053, 1193, 1659, 1757 |
| GsuI | CTGGAG | 1 cut(s) | 1758 |
| HaeIII | GGCC | 6 cut(s) | 210, 720, 1029, 1078, 1493, 1784 |
| HapII | CCGG | 3 cut(s) | 314, 1232, 1494 |
| HgaI | GACGC | 1 cut(s) | 482 |
| HhaI | GCGC | 1 cut(s) | 189 |
| Hin1II | CATG | 7 cut(s) | 92, 681, 1019, 1323, 1532, 1721, 1795 |
| Hin6I | GCGC | 1 cut(s) | 187 |
| HinP1I | GCGC | 1 cut(s) | 187 |
| HincII | GTYRAC | 2 cut(s) | 262, 847 |
| HindII | GTYRAC | 2 cut(s) | 262, 847 |
| HinfI | GANTC | 5 cut(s) | 5, 232, 1139, 1268, 1672 |
| HpaI | GTTAAC | 2 cut(s) | 262, 847 |
| HpaII | CCGG | 3 cut(s) | 314, 1232, 1494 |
| HphI | GGTGA | 3 cut(s) | 671, 1372, 1401 |
| Hpy166II | GTNNAC | 7 cut(s) | 262, 546, 662, 847, 1229, 1487, 1600 |
| Hpy188I | TCNGA | 7 cut(s) | 870, 1036, 1162, 1239, 1374, 1638, 1702 |
| Hpy188III | TCNNGA | 2 cut(s) | 811, 1288 |
| Hpy8I | GTNNAC | 7 cut(s) | 262, 546, 662, 847, 1229, 1487, 1600 |
| Hpy99I | CGWCG | 1 cut(s) | 1547 |
| HpyAV | CCTTC | 6 cut(s) | 172, 710, 904, 969, 1169, 1765 |
| HpyCH4III | ACNGT | 4 cut(s) | 409, 444, 543, 1146 |
| HpyCH4IV | ACGT | 4 cut(s) | 264, 673, 1545, 1779 |
| HpyCH4V | TGCA | 9 cut(s) | 92, 471, 538, 677, 1323, 1487, 1570, 1582, 1697 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 89, 1026, 1655, 1753, 1765 |
| HpyF3I | CTNAG | 5 cut(s) | 822, 1113, 1371, 1404, 1701 |
| HpySE526I | ACGT | 4 cut(s) | 264, 673, 1545, 1779 |
| Hsp92II | CATG | 7 cut(s) | 92, 681, 1019, 1323, 1532, 1721, 1795 |
| HspAI | GCGC | 1 cut(s) | 187 |
| KpnI | GGTACC | 2 cut(s) | 1434, 1509 |
| KspAI | GTTAAC | 2 cut(s) | 262, 847 |
| KspI | CCGCGG | 1 cut(s) | 1056 |
| Kzo9I | GATC | 8 cut(s) | 286, 352, 460, 572, 865, 1234, 1303, 1564 |
| LmnI | GCTCC | 4 cut(s) | 739, 988, 1639, 1739 |
| Lsp1109I | GCAGC | 3 cut(s) | 1179, 1645, 1768 |
| LweI | GCATC | 3 cut(s) | 1109, 1684, 1706 |
| MabI | ACCWGGT | 1 cut(s) | 1426 |
| MaeI | CTAG | 3 cut(s) | 201, 998, 1577 |
| MaeII | ACGT | 4 cut(s) | 264, 673, 1545, 1779 |
| MaeIII | GTNAC | 3 cut(s) | 265, 403, 1407 |
| MalI | GATC | 8 cut(s) | 288, 354, 462, 574, 867, 1236, 1305, 1566 |
| MboI | GATC | 8 cut(s) | 286, 352, 460, 572, 865, 1234, 1303, 1564 |
| MboII | GAAGA | 8 cut(s) | 187, 286, 296, 557, 567, 760, 1181, 1703 |
| MfeI | CAATTG | 2 cut(s) | 195, 690 |
| MflI | RGATCY | 2 cut(s) | 352, 572 |
| MhlI | GDGCHC | 3 cut(s) | 18, 1349, 1489 |
| MlsI | TGGCCA | 3 cut(s) | 1029, 1078, 1784 |
| MluNI | TGGCCA | 3 cut(s) | 1029, 1078, 1784 |
| MlyI | GAGTC | 2 cut(s) | 1277, 1681 |
| MmeI | TCCRAC | 3 cut(s) | 360, 1014, 1518 |
| MnlI | CCTC | 9 cut(s) | 200, 246, 379, 606, 1062, 1309, 1413, 1720, 1741 |
| Mox20I | TGGCCA | 3 cut(s) | 1029, 1078, 1784 |
| Mph1103I | ATGCAT | 2 cut(s) | 94, 1699 |
| MscI | TGGCCA | 3 cut(s) | 1029, 1078, 1784 |
| MseI | TTAA | 8 cut(s) | 170, 261, 426, 474, 743, 846, 894, 929 |
| MslI | CAYNNNNRTG | 4 cut(s) | 710, 968, 1527, 1667 |
| Msp20I | TGGCCA | 3 cut(s) | 1029, 1078, 1784 |
| MspA1I | CMGCKG | 2 cut(s) | 1055, 1559 |
| MspI | CCGG | 3 cut(s) | 314, 1232, 1494 |
| MspR9I | CCNGG | 4 cut(s) | 309, 1026, 1428, 1765 |
| MunI | CAATTG | 2 cut(s) | 195, 690 |
| Mva1269I | GAATGC | 1 cut(s) | 1582 |
| MvaI | CCWGG | 4 cut(s) | 309, 1026, 1428, 1765 |
| MvnI | CGCG | 1 cut(s) | 1055 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 89, 1026, 1655, 1753, 1765 |
| NcoI | CCATGG | 1 cut(s) | 1717 |
| NdeII | GATC | 8 cut(s) | 286, 352, 460, 572, 865, 1234, 1303, 1564 |
| NlaIII | CATG | 7 cut(s) | 92, 681, 1019, 1323, 1532, 1721, 1795 |
| NlaIV | GGNNCC | 4 cut(s) | 984, 1346, 1432, 1507 |
| NmuCI | GTSAC | 3 cut(s) | 265, 403, 1407 |
| NsiI | ATGCAT | 2 cut(s) | 94, 1699 |
| NspI | RCATGY | 3 cut(s) | 92, 681, 1323 |
| NspV | TTCGAA | 1 cut(s) | 1108 |
| OliI | CACNNNNGTG | 1 cut(s) | 710 |
| PaeI | GCATGC | 1 cut(s) | 1323 |
| PaeR7I | CTCGAG | 1 cut(s) | 1066 |
| PceI | AGGCCT | 1 cut(s) | 210 |
| PctI | GAATGC | 1 cut(s) | 1582 |
| PfeI | GAWTC | 3 cut(s) | 5, 232, 1139 |
| PfoI | TCCNGGA | 1 cut(s) | 307 |
| PinAI | ACCGGT | 1 cut(s) | 313 |
| PkrI | GCNGC | 4 cut(s) | 1054, 1194, 1660, 1758 |
| PleI | GAGTC | 2 cut(s) | 1276, 1680 |
| PpsI | GAGTC | 2 cut(s) | 1276, 1680 |
| Ppu21I | YACGTR | 1 cut(s) | 674 |
| PshBI | ATTAAT | 1 cut(s) | 474 |
| Psp6I | CCWGG | 4 cut(s) | 307, 1024, 1426, 1763 |
| PspGI | CCWGG | 4 cut(s) | 307, 1024, 1426, 1763 |
| PspN4I | GGNNCC | 4 cut(s) | 984, 1346, 1432, 1507 |
| PspPI | GGNCC | 1 cut(s) | 311 |
| PspXI | VCTCGAGB | 1 cut(s) | 1066 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 654, 686 |
| PstI | CTGCAG | 1 cut(s) | 1572 |
| PsuI | RGATCY | 2 cut(s) | 352, 572 |
| PvuII | CAGCTG | 1 cut(s) | 1559 |
| RsaI | GTAC | 4 cut(s) | 1432, 1507, 1601, 1612 |
| RsaNI | GTAC | 4 cut(s) | 1431, 1506, 1600, 1611 |
| RseI | CAYNNNNRTG | 4 cut(s) | 710, 968, 1527, 1667 |
| SacII | CCGCGG | 1 cut(s) | 1056 |
| SaqAI | TTAA | 8 cut(s) | 170, 261, 426, 474, 743, 846, 894, 929 |
| SatI | GCNGC | 4 cut(s) | 1053, 1193, 1659, 1757 |
| Sau3AI | GATC | 8 cut(s) | 286, 352, 460, 572, 865, 1234, 1303, 1564 |
| Sau96I | GGNCC | 1 cut(s) | 311 |
| SchI | GAGTC | 2 cut(s) | 1277, 1681 |
| ScrFI | CCNGG | 4 cut(s) | 309, 1026, 1428, 1765 |
| SduI | GDGCHC | 3 cut(s) | 18, 1349, 1489 |
| SexAI | ACCWGGT | 1 cut(s) | 1426 |
| SfaNI | GCATC | 3 cut(s) | 1109, 1684, 1706 |
| SfcI | CTRYAG | 3 cut(s) | 1093, 1568, 1626 |
| Sfr274I | CTCGAG | 1 cut(s) | 1066 |
| Sfr303I | CCGCGG | 1 cut(s) | 1056 |
| SfuI | TTCGAA | 1 cut(s) | 1108 |
| SgrBI | CCGCGG | 1 cut(s) | 1056 |
| SinI | GGWCC | 1 cut(s) | 311 |
| SlaI | CTCGAG | 1 cut(s) | 1066 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 710, 968, 1527, 1667 |
| SmlI | CTYRAG | 5 cut(s) | 144, 512, 708, 1066, 1711 |
| SmoI | CTYRAG | 5 cut(s) | 144, 512, 708, 1066, 1711 |
| SpeI | ACTAGT | 1 cut(s) | 1576 |
| SphI | GCATGC | 1 cut(s) | 1323 |
| SseBI | AGGCCT | 1 cut(s) | 210 |
| SsiI | CCGC | 6 cut(s) | 784, 855, 1053, 1055, 1090, 1754 |
| SspMI | CTAG | 3 cut(s) | 201, 998, 1577 |
| StuI | AGGCCT | 1 cut(s) | 210 |
| StyD4I | CCNGG | 4 cut(s) | 307, 1024, 1426, 1763 |
| StyI | CCWWGG | 4 cut(s) | 211, 978, 997, 1717 |
| TaaI | ACNGT | 4 cut(s) | 409, 444, 543, 1146 |
| TaiI | ACGT | 4 cut(s) | 267, 676, 1548, 1782 |
| TaqI | TCGA | 4 cut(s) | 1046, 1067, 1108, 1128 |
| TauI | GCSGC | 1 cut(s) | 1055 |
| TfiI | GAWTC | 3 cut(s) | 5, 232, 1139 |
| Tru1I | TTAA | 8 cut(s) | 170, 261, 426, 474, 743, 846, 894, 929 |
| Tru9I | TTAA | 8 cut(s) | 170, 261, 426, 474, 743, 846, 894, 929 |
| TscAI | CASTG | 4 cut(s) | 585, 1149, 1621, 1749 |
| TseFI | GTSAC | 3 cut(s) | 265, 403, 1407 |
| TseI | GCWGC | 3 cut(s) | 1192, 1658, 1756 |
| Tsp45I | GTSAC | 3 cut(s) | 265, 403, 1407 |
| TspDTI | ATGAA | 2 cut(s) | 923, 1188 |
| TspGWI | ACGGA | 3 cut(s) | 51, 69, 872 |
| TspRI | CASTG | 4 cut(s) | 585, 1149, 1621, 1749 |
| VneI | GTGCAC | 1 cut(s) | 1485 |
| VpaK11BI | GGWCC | 1 cut(s) | 311 |
| VspI | ATTAAT | 1 cut(s) | 474 |
| XapI | RAATTY | 7 cut(s) | 790, 915, 931, 1352, 1391, 1449, 1685 |
| XceI | RCATGY | 3 cut(s) | 92, 681, 1323 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 305 |
| XhoI | CTCGAG | 1 cut(s) | 1066 |
| XmaJI | CCTAGG | 1 cut(s) | 997 |
| XmiI | GTMKAC | 1 cut(s) | 545 |
| XspI | CTAG | 3 cut(s) | 201, 998, 1577 |
| Zsp2I | ATGCAT | 2 cut(s) | 94, 1699 |