Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0013159

Physical Location & Seq

Genomic Coordinates Reverse (-)

74844181 .. 74846784

Gene Structure 2604 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG435300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1716 bp

ATGCCAATAATCACCATCACGACTCATGAGAGAAGAATGCCATGTAAATTCACTCTTTTTATATTAAAACAATCACACTCATCTTCCCGCGCTTTACATGTCACTACTATTCCAATGACTCCCATCACCCAACACCGTACATTTCAATCCTCGCCTGACCTGTACACAAAGCTGATCGGAATTTACGCTCGTGATCGACAATTGCAGCCAGCAAGACTACTCCACGCCCATTTGATCACCACCGGGTTGGCCCGTTTGACCCATTTTGCCTCCAAGCTCATAGCCTTGTACGCTTCCTGCGGCCGAGTAGCCCATGCCCGTGACCTGTTCGACCAAATTCCCAAGACGAACATACGCCGGTGGTCTGCCCTCATCGGAGCCTACGCTCGCTCTGGGTTTCATCAGCAAGCAATGGATGTGTTCAGTGAGATGCAAAGAGCGGGTTCCAGGCCCAATAGGATTGTTATTCCCAGTGTTCTCAAGGCTTGTGGGCATCTCTCTGATGTTAAAACCGGTGAGAAACTACATGCTGTTGTGTTCAGGCACTCGTTTGAGTTTGATGCTTTTATTAGCAGCGCGCTTGTTGACATGTACTCGAAGAATGGGCGCGTGGAGAAGGCGCGCCGGGTGTTTGATATGATGGTGGAGAAAGATTTGGTGGCTTTGAATGCTGTTGTTTCGGGGTTTTGTCAGCATGGCATGGCGGAAGAAGCATTGGTTTTGGTGGAGGAAATGCAGCTGGTGGGGATTAAGCCTAATTTGATTACTTGGAACACTTTGGTTGCTGGGTTTTCGCAGAAGGGTGATGAAGCAATGGCCTCTAGGCTGTTTAAGTTTATGCGCGTGAACGGGATTGAGCCTGATGTTGTTTCTTGGACTTCGGTTATATCTGGGTTTGTGAAGAATTTTCAAAACAGTAAGGCTTTTTATACATTTAAGCAAATGTTGGATCGTGGAATATGTCCAACTTCGGCTACAGTCAGTAGCCTGTTGCCTGCTTGTGCAGCTGTGACGAACTTGAGGTCTGGTAAGGAGATACATGCTTATGCATTGGTGACTGGAGTTGAAGCTGATGTATATGTGAGGAGTGCTCTTGTTGATATGTATGCGAAATGCGGATTTATATATGAAGCAAAGACATTGTTTTGCAGGATGTCTGAAAAGAACACTGTAACGTGGAACTCAATGATTTTTGGATACACAAATCATGGGTATTGCACTGAAGCAATTGAGCTTTTCAACAAGATGAAGACAGAAGACAACAGAAAACTTGATTACTTGACTTTCGTAGCAGTCCTTACTGCTTGTTGTCATGCTGGAATGATTGAACTTGGCAAAAGCTTGTTTAGTTCGATGCAGGAAGAACATGGGATCATGCCAAGACTAGAACATTATGCATGTATGGTTGATCTTCTAGGTCGAGCAGGAAATCTCACTGAGGCATATGATATGATTAAGGCAATGCCCATGGAGCCAGATTTGTTTGTATGGGGAGCATTATTAGGAGCAAGTCGGAACTATGGAAATATAGAACTTGCTGAGATAGCAGCTAAGCATTTGTCAGAGCTAGAGCCGGAGAGTGCAGGAAACAATTTGCTATTATCAAGTCTATATGCAGATGCTGGAAATTGGGTAAATGTTGCAAGGTTGAAGAAAATGATGAAGAAAAAGAAGTTAAGGAAACTACCAGGATGCAGTTGGACTGAAGCTGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

571

Amino Acids

63.83

Weight (kDa)

9.1

Isoelectric Point (pI)

43.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR	PF01535	121 - 148	6.6e-06	PPR repeat
PPR_2	PF13041	218 - 264	7.8e-10	PPR repeat family
PPR_long	PF17177	235 - 337	8.6e-07	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	241 - 302	1.5e-10	Pentatricopeptide repeat domain
PPR_2	PF13041	252 - 301	5.1e-11	PPR repeat family
PPR_3	PF13812	276 - 334	2.4e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	287 - 335	6.2e-11	PPR repeat family
PPR_2	PF13041	388 - 438	1.1e-09	PPR repeat family
PPR	PF01535	391 - 419	3.8e-08	PPR repeat
E_motif	PF20431	507 - 569	2.4e-20	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0013159)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G59600
fragaria_vesca	FvH4_3g36900
malus_domestica	MD11G1095800.v1.1
prunus_persica	Prupe.6G071300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0066131 RchiOBHm_Chr5g0066221 RchiOBHm_Chr5g0066241 RchiOBHm_Chr5g0066281
rosa_laevigata	RLG00000035845
rosa_multiflora	Rmu_sc0002406.1_g000015 Rmu_sc0019146.1_g000002
rosa_roxburghii	Rroxscaffold_1G00014840
rosa_rugosa	Rorug05G0376700
rosa_samantha	Rh5AG435300 Rh5BG451400 Rh5CG473600 Rh5DG466100
rosa_wichuraiana	Rw5G040750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	440
AccII	CGCG	5 cut(s)	90, 578, 609, 622, 843
AciI	CCGC	5 cut(s)	88, 300, 440, 704, 1116
AclWI	GGATC	2 cut(s)	957, 1379
AcoI	YGGCCR	1 cut(s)	301
AcsI	RAATTY	4 cut(s)	47, 180, 336, 904
AcuI	CTGAAG	1 cut(s)	1242
AfaI	GTAC	4 cut(s)	139, 164, 290, 593
AflIII	ACRYGT	2 cut(s)	97, 588
AgeI	ACCGGT	1 cut(s)	512
AgsI	TTSAA	7 cut(s)	146, 667, 911, 1067, 1240, 1328, 1651
AjnI	CCWGG	2 cut(s)	446, 1687
Alw21I	GWGCWC	1 cut(s)	1093
AlwI	GGATC	2 cut(s)	957, 1379
AlwNI	CAGNNNCTG	1 cut(s)	1622
AoxI	GGCC	4 cut(s)	249, 301, 449, 816
ApeKI	GCWGC	6 cut(s)	205, 573, 736, 1004, 1547, 1709
ApoI	RAATTY	4 cut(s)	47, 180, 336, 904
ArsI	GACNNNNNNTTYG	2 cut(s)	1007, 1039
AscI	GGCGCGCC	1 cut(s)	620
AsiGI	ACCGGT	1 cut(s)	512
AspLEI	GCGC	7 cut(s)	92, 578, 580, 609, 622, 624, 843
AspS9I	GGNCC	2 cut(s)	250, 450
AsuC2I	CCSGG	2 cut(s)	244, 626
AsuHPI	GGTGA	6 cut(s)	4, 118, 229, 527, 815, 1066
BauI	CACGAG	1 cut(s)	189
BbsI	GAAGAC	2 cut(s)	1256, 1263
Bbv12I	GWGCWC	1 cut(s)	1093
BbvI	GCAGC	6 cut(s)	217, 585, 748, 1016, 1559, 1696
BccI	CCATC	3 cut(s)	23, 131, 634
BciT130I	CCWGG	2 cut(s)	448, 1689
BciVI	GTATCC	1 cut(s)	1190
BclI	TGATCA	1 cut(s)	234
BcnI	CCSGG	2 cut(s)	244, 626
BfaI	CTAG	4 cut(s)	822, 1385, 1415, 1568
BfmI	CTRYAG	1 cut(s)	975
BfuI	GTATCC	1 cut(s)	1190
BisI	GCNGC	7 cut(s)	206, 301, 574, 737, 1005, 1548, 1710
BlpI	GCTNAGC	1 cut(s)	1551
BlsI	GCNGC	7 cut(s)	207, 302, 575, 738, 1006, 1549, 1711
Bme1390I	CCNGG	4 cut(s)	244, 448, 626, 1689
BmgT120I	GGNCC	2 cut(s)	250, 450
BmiI	GGNNCC	3 cut(s)	379, 445, 1473
BmrFI	CCNGG	4 cut(s)	244, 448, 626, 1689
BmrI	ACTGGG	1 cut(s)	465
BmsI	GCATC	6 cut(s)	420, 502, 550, 1344, 1609, 1682
BmuI	ACTGGG	1 cut(s)	465
BpiI	GAAGAC	2 cut(s)	1256, 1263
BplI	GAGNNNNNCTC	2 cut(s)	1075, 1107
BpmI	CTGGAG	1 cut(s)	1080
Bpu1102I	GCTNAGC	1 cut(s)	1551
BpuEI	CTTGAG	2 cut(s)	464, 1039
BpuMI	CCSGG	2 cut(s)	244, 626
BsaJI	CCNNGG	1 cut(s)	1467
BsaWI	WCCGGW	1 cut(s)	512
Bse118I	RCCGGY	2 cut(s)	357, 512
Bse1I	ACTGG	2 cut(s)	471, 1063
Bse3DI	GCAATG	3 cut(s)	417, 819, 1467
BseBI	CCWGG	2 cut(s)	448, 1689
BseDI	CCNNGG	1 cut(s)	1467
BseGI	GGATG	3 cut(s)	421, 1158, 1697
BseMI	GCAATG	3 cut(s)	417, 819, 1467
BseMII	CTCAG	2 cut(s)	1428, 1530
BseNI	ACTGG	2 cut(s)	471, 1063
BsePI	GCGCGC	2 cut(s)	576, 620
BseRI	GAGGAG	1 cut(s)	1099
BseX3I	CGGCCG	1 cut(s)	301
BseXI	GCAGC	6 cut(s)	217, 585, 748, 1016, 1559, 1696
BseYI	CCCAGC	1 cut(s)	785
BsgI	GTGCAG	2 cut(s)	1023, 1602
Bsh1236I	CGCG	5 cut(s)	90, 578, 609, 622, 843
Bsh1285I	CGRYCG	1 cut(s)	304
BshFI	GGCC	4 cut(s)	251, 303, 451, 818
BshTI	ACCGGT	1 cut(s)	512
BsiEI	CGRYCG	1 cut(s)	304
BsiHKAI	GWGCWC	1 cut(s)	1093
BsiSI	CCGG	5 cut(s)	243, 358, 513, 625, 1574
BsmI	GAATGC	2 cut(s)	42, 673
BsnI	GGCC	4 cut(s)	251, 303, 451, 818
Bsp1286I	GDGCHC	1 cut(s)	1093
Bsp1407I	TGTACA	1 cut(s)	162
Bsp143I	GATC	6 cut(s)	174, 193, 234, 949, 1371, 1408
Bsp1720I	GCTNAGC	1 cut(s)	1551
Bsp19I	CCATGG	1 cut(s)	1467
BspACI	CCGC	5 cut(s)	88, 300, 440, 704, 1116
BspANI	GGCC	4 cut(s)	251, 303, 451, 818
BspCNI	CTCAG	2 cut(s)	1429, 1531
BspFNI	CGCG	5 cut(s)	90, 578, 609, 622, 843
BspHI	TCATGA	1 cut(s)	25
BspLI	GGNNCC	3 cut(s)	379, 445, 1473
BspPI	GGATC	2 cut(s)	957, 1379
BsrBI	CCGCTC	1 cut(s)	440
BsrDI	GCAATG	3 cut(s)	417, 819, 1467
BsrFI	RCCGGY	2 cut(s)	357, 512
BsrGI	TGTACA	1 cut(s)	162
BsrI	ACTGG	2 cut(s)	471, 1063
BssAI	RCCGGY	2 cut(s)	357, 512
BssECI	CCNNGG	1 cut(s)	1467
BssHII	GCGCGC	2 cut(s)	576, 620
BssMI	GATC	6 cut(s)	174, 193, 234, 949, 1371, 1408
BssSI	CACGAG	1 cut(s)	189
BssT1I	CCWWGG	1 cut(s)	1467
Bst2BI	CACGAG	1 cut(s)	189
Bst2UI	CCWGG	2 cut(s)	448, 1689
Bst4CI	ACNGT	4 cut(s)	137, 917, 979, 1171
BstAUI	TGTACA	1 cut(s)	162
BstC8I	GCNNGC	6 cut(s)	210, 388, 408, 578, 622, 996
BstDEI	CTNAG	3 cut(s)	1437, 1539, 1551
BstDSI	CCRYGG	1 cut(s)	1467
BstF5I	GGATG	3 cut(s)	421, 1158, 1697
BstFNI	CGCG	5 cut(s)	90, 578, 609, 622, 843
BstHHI	GCGC	7 cut(s)	92, 578, 580, 609, 622, 624, 843
BstKTI	GATC	6 cut(s)	177, 196, 237, 952, 1374, 1411
BstMBI	GATC	6 cut(s)	174, 193, 234, 949, 1371, 1408
BstMCI	CGRYCG	1 cut(s)	304
BstMWI	GCNNNNNNNGC	6 cut(s)	290, 668, 710, 1004, 1471, 1544
BstNI	CCWGG	2 cut(s)	448, 1689
BstNSI	RCATGY	5 cut(s)	101, 530, 592, 1043, 1401
BstSCI	CCNGG	4 cut(s)	242, 446, 624, 1687
BstSFI	CTRYAG	1 cut(s)	975
BstUI	CGCG	5 cut(s)	90, 578, 609, 622, 843
BstV1I	GCAGC	6 cut(s)	217, 585, 748, 1016, 1559, 1696
BstV2I	GAAGAC	2 cut(s)	1256, 1263
BstXI	CCANNNNNNTGG	1 cut(s)	247
BstZI	CGGCCG	1 cut(s)	301
BsuI	GTATCC	1 cut(s)	1190
BsuRI	GGCC	4 cut(s)	251, 303, 451, 818
BtgI	CCRYGG	1 cut(s)	1467
BtsCI	GGATG	3 cut(s)	421, 1158, 1697
BtsIMutI	CAGTG	5 cut(s)	430, 478, 1167, 1218, 1434
Cac8I	GCNNGC	6 cut(s)	210, 388, 408, 578, 622, 996
CaiI	CAGNNNCTG	1 cut(s)	1622
CciI	TCATGA	1 cut(s)	25
CfoI	GCGC	7 cut(s)	92, 578, 580, 609, 622, 624, 843
Cfr10I	RCCGGY	2 cut(s)	357, 512
Cfr13I	GGNCC	2 cut(s)	250, 450
Csp6I	GTAC	4 cut(s)	138, 163, 289, 592
CspAI	ACCGGT	1 cut(s)	512
CspCI	CAANNNNNGTGG	2 cut(s)	469, 504
CviQI	GTAC	4 cut(s)	138, 163, 289, 592
DdeI	CTNAG	3 cut(s)	1437, 1539, 1551
DpnI	GATC	6 cut(s)	176, 195, 236, 951, 1373, 1410
DpnII	GATC	6 cut(s)	174, 193, 234, 949, 1371, 1408
EaeI	YGGCCR	1 cut(s)	301
EagI	CGGCCG	1 cut(s)	301
EciI	GGCGGA	1 cut(s)	719
EclXI	CGGCCG	1 cut(s)	301
Eco130I	CCWWGG	1 cut(s)	1467
Eco52I	CGGCCG	1 cut(s)	301
Eco57I	CTGAAG	1 cut(s)	1242
EcoRII	CCWGG	2 cut(s)	446, 1687
EcoT14I	CCWWGG	1 cut(s)	1467
EcoT22I	ATGCAT	2 cut(s)	1051, 1399
ErhI	CCWWGG	1 cut(s)	1467
FauI	CCCGC	2 cut(s)	95, 433
FauNDI	CATATG	1 cut(s)	1444
FbaI	TGATCA	1 cut(s)	234
Fnu4HI	GCNGC	7 cut(s)	206, 301, 574, 737, 1005, 1548, 1710
FokI	GGATG	3 cut(s)	428, 1165, 1704
Fsp4HI	GCNGC	7 cut(s)	206, 301, 574, 737, 1005, 1548, 1710
FspBI	CTAG	4 cut(s)	822, 1385, 1415, 1568
GlaI	GCGC	7 cut(s)	91, 577, 579, 608, 621, 623, 842
GluI	GCNGC	7 cut(s)	206, 301, 574, 737, 1005, 1548, 1710
GsaI	CCCAGC	1 cut(s)	789
GsuI	CTGGAG	1 cut(s)	1080
HaeIII	GGCC	4 cut(s)	251, 303, 451, 818
HapII	CCGG	5 cut(s)	243, 358, 513, 625, 1574
HhaI	GCGC	7 cut(s)	92, 578, 580, 609, 622, 624, 843
Hin6I	GCGC	7 cut(s)	90, 576, 578, 607, 620, 622, 841
HinP1I	GCGC	7 cut(s)	90, 576, 578, 607, 620, 622, 841
HincII	GTYRAC	1 cut(s)	586
HindII	GTYRAC	1 cut(s)	586
HindIII	AAGCTT	1 cut(s)	1339
HinfI	GANTC	2 cut(s)	22, 118
HpaII	CCGG	5 cut(s)	243, 358, 513, 625, 1574
HphI	GGTGA	6 cut(s)	4, 118, 229, 527, 815, 1066
Hpy166II	GTNNAC	3 cut(s)	165, 586, 847
Hpy188I	TCNGA	6 cut(s)	179, 377, 502, 1159, 1515, 1564
Hpy188III	TCNNGA	3 cut(s)	19, 26, 191
Hpy8I	GTNNAC	3 cut(s)	165, 586, 847
HpyAV	CCTTC	2 cut(s)	610, 793
HpyCH4III	ACNGT	4 cut(s)	137, 917, 979, 1171
HpyCH4IV	ACGT	1 cut(s)	1175
HpyF10VI	GCNNNNNNNGC	6 cut(s)	290, 668, 710, 1004, 1471, 1544
HpyF3I	CTNAG	3 cut(s)	1437, 1539, 1551
HpySE526I	ACGT	1 cut(s)	1175
HspAI	GCGC	7 cut(s)	90, 576, 578, 607, 620, 622, 841
Ksp22I	TGATCA	1 cut(s)	234
Kzo9I	GATC	6 cut(s)	174, 193, 234, 949, 1371, 1408
LmnI	GCTCC	4 cut(s)	377, 1471, 1493, 1505
Lsp1109I	GCAGC	6 cut(s)	217, 585, 748, 1016, 1559, 1696
LweI	GCATC	6 cut(s)	420, 502, 550, 1344, 1609, 1682
MaeI	CTAG	4 cut(s)	822, 1385, 1415, 1568
MaeII	ACGT	1 cut(s)	1175
MaeIII	GTNAC	5 cut(s)	100, 320, 1009, 1054, 1171
MalI	GATC	6 cut(s)	176, 195, 236, 951, 1373, 1410
MbiI	CCGCTC	1 cut(s)	440
MboI	GATC	6 cut(s)	174, 193, 234, 949, 1371, 1408
MfeI	CAATTG	2 cut(s)	200, 1227
MhlI	GDGCHC	1 cut(s)	1093
MluCI	AATT	9 cut(s)	47, 180, 200, 336, 757, 904, 1227, 1591, 1627
MlyI	GAGTC	2 cut(s)	16, 112
MmeI	TCCRAC	4 cut(s)	927, 989, 1493, 1679
MnlI	CCTC	8 cut(s)	160, 280, 380, 721, 829, 1014, 1077, 1432
Mph1103I	ATGCAT	2 cut(s)	1051, 1399
MseI	TTAA	7 cut(s)	65, 507, 750, 831, 936, 1455, 1676
MslI	CAYNNNNRTG	2 cut(s)	318, 1044
MspA1I	CMGCKG	2 cut(s)	739, 1007
MspI	CCGG	5 cut(s)	243, 358, 513, 625, 1574
MspR9I	CCNGG	4 cut(s)	244, 448, 626, 1689
MunI	CAATTG	2 cut(s)	200, 1227
Mva1269I	GAATGC	2 cut(s)	42, 673
MvaI	CCWGG	2 cut(s)	448, 1689
MvnI	CGCG	5 cut(s)	90, 578, 609, 622, 843
MwoI	GCNNNNNNNGC	6 cut(s)	290, 668, 710, 1004, 1471, 1544
NciI	CCSGG	2 cut(s)	244, 626
NcoI	CCATGG	1 cut(s)	1467
NdeI	CATATG	1 cut(s)	1444
NdeII	GATC	6 cut(s)	174, 193, 234, 949, 1371, 1408
NlaIV	GGNNCC	3 cut(s)	379, 445, 1473
NmeAIII	GCCGAG	1 cut(s)	329
NmuCI	GTSAC	4 cut(s)	100, 320, 1009, 1054
NsiI	ATGCAT	2 cut(s)	1051, 1399
NspI	RCATGY	5 cut(s)	101, 530, 592, 1043, 1401
PagI	TCATGA	1 cut(s)	25
PalAI	GGCGCGCC	1 cut(s)	620
PauI	GCGCGC	2 cut(s)	576, 620
PciI	ACATGT	2 cut(s)	97, 588
PctI	GAATGC	2 cut(s)	42, 673
PinAI	ACCGGT	1 cut(s)	512
PkrI	GCNGC	7 cut(s)	207, 302, 575, 738, 1006, 1549, 1711
PleI	GAGTC	2 cut(s)	16, 112
PpsI	GAGTC	2 cut(s)	16, 112
PscI	ACATGT	2 cut(s)	97, 588
Psp6I	CCWGG	2 cut(s)	446, 1687
PspFI	CCCAGC	1 cut(s)	785
PspGI	CCWGG	2 cut(s)	446, 1687
PspN4I	GGNNCC	3 cut(s)	379, 445, 1473
PspPI	GGNCC	2 cut(s)	250, 450
PstNI	CAGNNNCTG	1 cut(s)	1622
PteI	GCGCGC	2 cut(s)	576, 620
PvuII	CAGCTG	2 cut(s)	739, 1007
RsaI	GTAC	4 cut(s)	139, 164, 290, 593
RsaNI	GTAC	4 cut(s)	138, 163, 289, 592
RseI	CAYNNNNRTG	2 cut(s)	318, 1044
SaqAI	TTAA	7 cut(s)	65, 507, 750, 831, 936, 1455, 1676
SatI	GCNGC	7 cut(s)	206, 301, 574, 737, 1005, 1548, 1710
Sau3AI	GATC	6 cut(s)	174, 193, 234, 949, 1371, 1408
Sau96I	GGNCC	2 cut(s)	250, 450
SchI	GAGTC	2 cut(s)	16, 112
ScrFI	CCNGG	4 cut(s)	244, 448, 626, 1689
SduI	GDGCHC	1 cut(s)	1093
SfaNI	GCATC	6 cut(s)	420, 502, 550, 1344, 1609, 1682
SfcI	CTRYAG	1 cut(s)	975
SgrAI	CRCCGGYG	1 cut(s)	357
SgsI	GGCGCGCC	1 cut(s)	620
SmiMI	CAYNNNNRTG	2 cut(s)	318, 1044
SmlI	CTYRAG	2 cut(s)	479, 1018
SmoI	CTYRAG	2 cut(s)	479, 1018
Sse9I	AATT	9 cut(s)	47, 180, 200, 336, 757, 904, 1227, 1591, 1627
SsiI	CCGC	5 cut(s)	88, 300, 440, 704, 1116
SspMI	CTAG	4 cut(s)	822, 1385, 1415, 1568
StyD4I	CCNGG	4 cut(s)	242, 446, 624, 1687
StyI	CCWWGG	1 cut(s)	1467
TaaI	ACNGT	4 cut(s)	137, 917, 979, 1171
TaiI	ACGT	1 cut(s)	1178
TaqI	TCGA	5 cut(s)	196, 330, 596, 1352, 1420
TasI	AATT	9 cut(s)	47, 180, 200, 336, 757, 904, 1227, 1591, 1627
TatI	WGTACW	2 cut(s)	162, 591
TauI	GCSGC	1 cut(s)	303
Tru1I	TTAA	7 cut(s)	65, 507, 750, 831, 936, 1455, 1676
Tru9I	TTAA	7 cut(s)	65, 507, 750, 831, 936, 1455, 1676
TscAI	CASTG	5 cut(s)	430, 478, 1174, 1225, 1441
TseFI	GTSAC	4 cut(s)	100, 320, 1009, 1054
TseI	GCWGC	6 cut(s)	205, 573, 736, 1004, 1547, 1709
Tsp45I	GTSAC	4 cut(s)	100, 320, 1009, 1054
TspDTI	ATGAA	5 cut(s)	389, 822, 1143, 1262, 1676
TspRI	CASTG	5 cut(s)	430, 478, 1174, 1225, 1441
XapI	RAATTY	4 cut(s)	47, 180, 336, 904
XceI	RCATGY	5 cut(s)	101, 530, 592, 1043, 1401
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1695
XspI	CTAG	4 cut(s)	822, 1385, 1415, 1568
Zsp2I	ATGCAT	2 cut(s)	1051, 1399

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.