Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0013159

Physical Location & Seq

Genomic Coordinates Reverse (-)

71998523 .. 72000368

Gene Structure 1846 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G040750.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1755 bp

ATGACTCCCAACACCCAACACCGTACATTTCAATCCTCGCCTGACCTGTACACAAAGCTGATCGGAATCTACGCTCGTGATCGAGAATTGCAGCCAGCAAGACTACTCCACGCCCATTTGATCACCACCGGGTTGGCCCGTTTGACCCACTTTGCCTCCAAGCTCATAGCCTTGTACGCTTCCTGCGGCCGAGTAGCCCATGCCCGTGACCTGTTCGACCAAATTCCCAAGACGAACATACGCCTGTGGTTTGCCCTCATTGGAGCCTACGCTCGCTCTGGGTTTCATCAGCAAGCAATGGATGTGTTCAGTGAGATGCAAAGAGCGGGTTCGAGGCCCAATAGGATTGTTATTCCCAGTGTTCTCAAGGCATGTGGGCATCTCTCTGATGTTAAAACGGGTGAGAAACTACATGCTCTTTTGTTCAGGCACTCGTTTGAGTTTGATGCTTTTATTAGCAGCGCGCTTGTTGACATGTACTCGAAGAATGGGCGCTTGGAGAAGGCGCGCCGGGTGTTTGATATGATGGTGGAGAAAGATTTGGTGGCTTTGAATGCTGTTGTTTCGGGGTTTTGTCAGCATGGCATGGCGGAAGAAGCATTGGTTTTGGTGGAGGAAATGCAGCTGGTGGGGATTAAGCCTAATTTGATTACTTGGAACACTTTGGTTGCTGGGTTTTCGCAGAAGGGTGATGAAGCAATGGCCTCTAGGCTGTTTAAGTTGATGCGCGTGAATGGGATTGAGCCTGATGTTGTTTCTTGGACTTCGGTTATATCTGGGTTTGTGAAGAATTTTCAAAACAGTAAGGCTTTTTATACATTTAAGCAAATGTTGGATCATGGAATATGTCCAACTTCAGCTACGATTAGTAGCCTGTTGCCTGCTTGTGCAGCTGTGGCGAACTTGAGGTCTGGTAAGGAGATACATGCTTATGCATTGGTGACTGGAGTTGAAGTTGATGTGTATGTGAGGAGTGCTCTTGTTGATATGTATGCGAAATGCGGATTTATATATGAAGCAAAGACATTGTTTTGCAAGATGTCTGAAAGGAACACCGTAACGTGGAACTCAATGATTTTTGGATACGCGAATCATGGGTATTGCACTGAAGCAATTGAGCTTTTCAACAAGATGAAGACAGAAGACAACAGGAAACTTGATTACTTGACTTTCGTAGCAGTCCTTACTGCTTGTTGTCATGCTGGAATGATTGAACTTGGCAAAAGCTTGTTTAGTTCGATGCAGGAAGAACATGGGATCATGCCAAGACTAGAACATTATGCATGTATGGTTGATCTTCTAGGTCGATTGGGGAATCTCACTGAGGCATATGATATGATTAAGGCAATGCCCATGGAGCCAGATTTGTTTGTATGGGGAGCATTATTAGGAGCAAGTCGGAACTATGGGAATATAGAACTTGCTGAGATAGCAGCTAAGCATTTGTCAGAGCTAGAGCCGGAGAGTGCAGGAAACAATTTGCTATTATCAAGTCTATATGCAGATGCTGGAAATTGGGTAAATGTTGCAAGGTTGAAGAAAATGATGAAGAAAAAGAAGTTAAGGAAACTACCGGATGCAGTTGGACGGAAGCTGCCTGATATACAAGAATGTCTTTTTAAGGAAGGTTCTGTACAATTCTTCATTCAGAAGAGACCTGAAGAGAAGGAATCTACAGATTCCAAGTGTTTGGTTGCTGGAGTACTGATAACAATCACTTTAGGCAAGAGGCTTAGTGCAGGCCTCAAAATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

584

Amino Acids

65.17

Weight (kDa)

8.85

Isoelectric Point (pI)

42.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	180 - 226	8.1e-10	PPR repeat family
PPR_long	PF17177	197 - 299	2.3e-07	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	203 - 264	4.6e-11	Pentatricopeptide repeat domain
PPR_2	PF13041	214 - 263	4.1e-11	PPR repeat family
PPR_3	PF13812	238 - 296	1.8e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	249 - 297	2.4e-10	PPR repeat family
PPR_2	PF13041	350 - 400	6.2e-10	PPR repeat family
PPR_1	PF12854	350 - 379	2.7e-06	PPR repeat
PPR	PF01535	353 - 381	1.3e-08	PPR repeat
E_motif	PF20431	469 - 525	1.6e-15	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0013159)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G59600
fragaria_vesca	FvH4_3g36900
malus_domestica	MD11G1095800.v1.1
prunus_persica	Prupe.6G071300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0066131 RchiOBHm_Chr5g0066221 RchiOBHm_Chr5g0066241 RchiOBHm_Chr5g0066281
rosa_laevigata	RLG00000035845
rosa_multiflora	Rmu_sc0002406.1_g000015 Rmu_sc0019146.1_g000002
rosa_roxburghii	Rroxscaffold_1G00014840
rosa_rugosa	Rorug05G0376700
rosa_samantha	Rh5AG435300 Rh5BG451400 Rh5CG473600 Rh5DG466100
rosa_wichuraiana	Rw5G040750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	326
AccII	CGCG	4 cut(s)	464, 508, 729, 1088
AciI	CCGC	4 cut(s)	186, 326, 590, 1002
AclWI	GGATC	2 cut(s)	843, 1265
AcoI	YGGCCR	1 cut(s)	187
AcsI	RAATTY	2 cut(s)	222, 790
AcuI	CTGAAG	3 cut(s)	840, 1128, 1680
AfaI	GTAC	6 cut(s)	25, 50, 176, 479, 1635, 1704
AfiI	CCNNNNNNNGG	1 cut(s)	1062
AflIII	ACRYGT	1 cut(s)	474
AgsI	TTSAA	7 cut(s)	32, 553, 797, 953, 1126, 1214, 1537
AjuI	GAANNNNNNNTTGG	2 cut(s)	479, 511
Alw21I	GWGCWC	1 cut(s)	979
Alw26I	GTCTC	1 cut(s)	1648
AlwI	GGATC	2 cut(s)	843, 1265
AlwNI	CAGNNNCTG	1 cut(s)	1508
AoxI	GGCC	5 cut(s)	135, 187, 335, 702, 1741
ApeKI	GCWGC	6 cut(s)	91, 459, 622, 890, 1433, 1594
ApoI	RAATTY	2 cut(s)	222, 790
ArsI	GACNNNNNNTTYG	2 cut(s)	893, 925
AscI	GGCGCGCC	1 cut(s)	506
AspLEI	GCGC	6 cut(s)	464, 466, 495, 508, 510, 729
AspS9I	GGNCC	2 cut(s)	136, 336
AsuC2I	CCSGG	2 cut(s)	130, 512
AsuHPI	GGTGA	4 cut(s)	115, 413, 701, 952
BarI	GAAGNNNNNNTAC	2 cut(s)	1617, 1649
BauI	CACGAG	1 cut(s)	75
BbsI	GAAGAC	2 cut(s)	1142, 1149
Bbv12I	GWGCWC	1 cut(s)	979
BbvI	GCAGC	6 cut(s)	103, 471, 634, 902, 1445, 1581
BccI	CCATC	1 cut(s)	520
BciVI	GTATCC	1 cut(s)	1076
BclI	TGATCA	1 cut(s)	120
BcnI	CCSGG	2 cut(s)	130, 512
BcoDI	GTCTC	1 cut(s)	1648
BfaI	CTAG	4 cut(s)	708, 1271, 1301, 1454
BfmI	CTRYAG	1 cut(s)	1674
BfoI	RGCGCY	1 cut(s)	496
BfuI	GTATCC	1 cut(s)	1076
BisI	GCNGC	7 cut(s)	92, 187, 460, 623, 891, 1434, 1595
BlpI	GCTNAGC	1 cut(s)	1437
BlsI	GCNGC	7 cut(s)	93, 188, 461, 624, 892, 1435, 1596
BmcAI	AGTACT	1 cut(s)	1704
Bme1390I	CCNGG	2 cut(s)	130, 512
BmgT120I	GGNCC	2 cut(s)	136, 336
BmiI	GGNNCC	2 cut(s)	265, 1359
BmrFI	CCNGG	2 cut(s)	130, 512
BmrI	ACTGGG	1 cut(s)	351
BmsI	GCATC	7 cut(s)	306, 388, 436, 714, 1230, 1495, 1567
BmuI	ACTGGG	1 cut(s)	351
BpiI	GAAGAC	2 cut(s)	1142, 1149
BplI	GAGNNNNNCTC	2 cut(s)	961, 993
BpmI	CTGGAG	2 cut(s)	966, 1719
Bpu1102I	GCTNAGC	1 cut(s)	1437
BpuEI	CTTGAG	2 cut(s)	350, 925
BpuMI	CCSGG	2 cut(s)	130, 512
BsaBI	GATNNNNATC	2 cut(s)	65, 1712
BsaI	GGTCTC	1 cut(s)	1648
BsaJI	CCNNGG	1 cut(s)	1353
BsaWI	WCCGGW	1 cut(s)	1573
BsaXI	ACNNNNNCTCC	4 cut(s)	140, 170, 939, 969
Bsc4I	CCNNNNNNNGG	1 cut(s)	1062
Bse1I	ACTGG	2 cut(s)	357, 949
Bse3DI	GCAATG	3 cut(s)	303, 705, 1353
Bse8I	GATNNNNATC	2 cut(s)	65, 1712
BseDI	CCNNGG	1 cut(s)	1353
BseGI	GGATG	2 cut(s)	307, 1582
BseJI	GATNNNNATC	2 cut(s)	65, 1712
BseLI	CCNNNNNNNGG	1 cut(s)	1062
BseMI	GCAATG	3 cut(s)	303, 705, 1353
BseMII	CTCAG	2 cut(s)	1314, 1416
BseNI	ACTGG	2 cut(s)	357, 949
BsePI	GCGCGC	2 cut(s)	462, 506
BseRI	GAGGAG	1 cut(s)	985
BseX3I	CGGCCG	1 cut(s)	187
BseXI	GCAGC	6 cut(s)	103, 471, 634, 902, 1445, 1581
BseYI	CCCAGC	1 cut(s)	671
BsgI	GTGCAG	2 cut(s)	909, 1488
Bsh1236I	CGCG	4 cut(s)	464, 508, 729, 1088
Bsh1285I	CGRYCG	1 cut(s)	190
BshFI	GGCC	5 cut(s)	137, 189, 337, 704, 1743
BsiEI	CGRYCG	1 cut(s)	190
BsiHKAI	GWGCWC	1 cut(s)	979
BsiSI	CCGG	4 cut(s)	129, 511, 1460, 1574
BslI	CCNNNNNNNGG	1 cut(s)	1062
BsmAI	GTCTC	1 cut(s)	1648
BsmI	GAATGC	1 cut(s)	559
BsnI	GGCC	5 cut(s)	137, 189, 337, 704, 1743
Bso31I	GGTCTC	1 cut(s)	1648
Bsp1286I	GDGCHC	1 cut(s)	979
Bsp1407I	TGTACA	2 cut(s)	48, 1633
Bsp143I	GATC	6 cut(s)	60, 79, 120, 835, 1257, 1294
Bsp1720I	GCTNAGC	1 cut(s)	1437
Bsp19I	CCATGG	1 cut(s)	1353
BspACI	CCGC	4 cut(s)	186, 326, 590, 1002
BspANI	GGCC	5 cut(s)	137, 189, 337, 704, 1743
BspCNI	CTCAG	2 cut(s)	1315, 1417
BspFNI	CGCG	4 cut(s)	464, 508, 729, 1088
BspLI	GGNNCC	2 cut(s)	265, 1359
BspPI	GGATC	2 cut(s)	843, 1265
BspTNI	GGTCTC	1 cut(s)	1648
BsrBI	CCGCTC	1 cut(s)	326
BsrDI	GCAATG	3 cut(s)	303, 705, 1353
BsrGI	TGTACA	2 cut(s)	48, 1633
BsrI	ACTGG	2 cut(s)	357, 949
BssECI	CCNNGG	1 cut(s)	1353
BssHII	GCGCGC	2 cut(s)	462, 506
BssMI	GATC	6 cut(s)	60, 79, 120, 835, 1257, 1294
BssSI	CACGAG	1 cut(s)	75
BssT1I	CCWWGG	1 cut(s)	1353
Bst2BI	CACGAG	1 cut(s)	75
Bst4CI	ACNGT	3 cut(s)	23, 803, 1057
Bst6I	CTCTTC	2 cut(s)	1646, 1656
BstAUI	TGTACA	2 cut(s)	48, 1633
BstC8I	GCNNGC	7 cut(s)	96, 274, 294, 464, 508, 882, 1741
BstDEI	CTNAG	4 cut(s)	1323, 1425, 1437, 1733
BstDSI	CCRYGG	1 cut(s)	1353
BstF5I	GGATG	2 cut(s)	307, 1582
BstFNI	CGCG	4 cut(s)	464, 508, 729, 1088
BstH2I	RGCGCY	1 cut(s)	496
BstHHI	GCGC	6 cut(s)	464, 466, 495, 508, 510, 729
BstKTI	GATC	6 cut(s)	63, 82, 123, 838, 1260, 1297
BstMAI	GTCTC	1 cut(s)	1648
BstMBI	GATC	6 cut(s)	60, 79, 120, 835, 1257, 1294
BstMCI	CGRYCG	1 cut(s)	190
BstMWI	GCNNNNNNNGC	7 cut(s)	176, 554, 596, 890, 896, 1357, 1430
BstNSI	RCATGY	5 cut(s)	375, 416, 478, 929, 1287
BstSCI	CCNGG	2 cut(s)	128, 510
BstSFI	CTRYAG	1 cut(s)	1674
BstUI	CGCG	4 cut(s)	464, 508, 729, 1088
BstV1I	GCAGC	6 cut(s)	103, 471, 634, 902, 1445, 1581
BstV2I	GAAGAC	2 cut(s)	1142, 1149
BstXI	CCANNNNNNTGG	2 cut(s)	133, 1690
BstZI	CGGCCG	1 cut(s)	187
BsuI	GTATCC	1 cut(s)	1076
BsuRI	GGCC	5 cut(s)	137, 189, 337, 704, 1743
BtgI	CCRYGG	1 cut(s)	1353
BtsCI	GGATG	2 cut(s)	307, 1582
BtsIMutI	CAGTG	4 cut(s)	316, 364, 1104, 1320
Cac8I	GCNNGC	7 cut(s)	96, 274, 294, 464, 508, 882, 1741
CaiI	CAGNNNCTG	1 cut(s)	1508
CfoI	GCGC	6 cut(s)	464, 466, 495, 508, 510, 729
Cfr13I	GGNCC	2 cut(s)	136, 336
Csp6I	GTAC	6 cut(s)	24, 49, 175, 478, 1634, 1703
CspCI	CAANNNNNGTGG	2 cut(s)	355, 390
CviQI	GTAC	6 cut(s)	24, 49, 175, 478, 1634, 1703
DdeI	CTNAG	4 cut(s)	1323, 1425, 1437, 1733
DpnI	GATC	6 cut(s)	62, 81, 122, 837, 1259, 1296
DpnII	GATC	6 cut(s)	60, 79, 120, 835, 1257, 1294
EaeI	YGGCCR	1 cut(s)	187
EagI	CGGCCG	1 cut(s)	187
Eam1104I	CTCTTC	2 cut(s)	1646, 1656
EarI	CTCTTC	2 cut(s)	1646, 1656
EciI	GGCGGA	1 cut(s)	605
EclXI	CGGCCG	1 cut(s)	187
Eco130I	CCWWGG	1 cut(s)	1353
Eco147I	AGGCCT	1 cut(s)	1743
Eco31I	GGTCTC	1 cut(s)	1648
Eco52I	CGGCCG	1 cut(s)	187
Eco57I	CTGAAG	3 cut(s)	840, 1128, 1680
EcoT14I	CCWWGG	1 cut(s)	1353
EcoT22I	ATGCAT	2 cut(s)	937, 1285
ErhI	CCWWGG	1 cut(s)	1353
FalI	AAGNNNNNCTT	2 cut(s)	1599, 1631
FauI	CCCGC	1 cut(s)	319
FauNDI	CATATG	1 cut(s)	1330
FbaI	TGATCA	1 cut(s)	120
Fnu4HI	GCNGC	7 cut(s)	92, 187, 460, 623, 891, 1434, 1595
FokI	GGATG	2 cut(s)	314, 1589
Fsp4HI	GCNGC	7 cut(s)	92, 187, 460, 623, 891, 1434, 1595
FspBI	CTAG	4 cut(s)	708, 1271, 1301, 1454
GlaI	GCGC	6 cut(s)	463, 465, 494, 507, 509, 728
GluI	GCNGC	7 cut(s)	92, 187, 460, 623, 891, 1434, 1595
GsaI	CCCAGC	1 cut(s)	675
GsuI	CTGGAG	2 cut(s)	966, 1719
HaeII	RGCGCY	1 cut(s)	496
HaeIII	GGCC	5 cut(s)	137, 189, 337, 704, 1743
HapII	CCGG	4 cut(s)	129, 511, 1460, 1574
HhaI	GCGC	6 cut(s)	464, 466, 495, 508, 510, 729
Hin6I	GCGC	6 cut(s)	462, 464, 493, 506, 508, 727
HinP1I	GCGC	6 cut(s)	462, 464, 493, 506, 508, 727
HincII	GTYRAC	1 cut(s)	472
HindII	GTYRAC	1 cut(s)	472
HindIII	AAGCTT	1 cut(s)	1225
HinfI	GANTC	6 cut(s)	4, 66, 1090, 1315, 1670, 1679
HpaII	CCGG	4 cut(s)	129, 511, 1460, 1574
HphI	GGTGA	4 cut(s)	115, 413, 701, 952
Hpy166II	GTNNAC	2 cut(s)	51, 472
Hpy188I	TCNGA	6 cut(s)	65, 388, 1045, 1401, 1450, 1650
Hpy188III	TCNNGA	2 cut(s)	77, 83
Hpy8I	GTNNAC	2 cut(s)	51, 472
HpyAV	CCTTC	4 cut(s)	496, 679, 1619, 1660
HpyCH4III	ACNGT	3 cut(s)	23, 803, 1057
HpyCH4IV	ACGT	1 cut(s)	1061
HpyF10VI	GCNNNNNNNGC	7 cut(s)	176, 554, 596, 890, 896, 1357, 1430
HpyF3I	CTNAG	4 cut(s)	1323, 1425, 1437, 1733
HpySE526I	ACGT	1 cut(s)	1061
HspAI	GCGC	6 cut(s)	462, 464, 493, 506, 508, 727
Ksp22I	TGATCA	1 cut(s)	120
Kzo9I	GATC	6 cut(s)	60, 79, 120, 835, 1257, 1294
LmnI	GCTCC	4 cut(s)	263, 1357, 1379, 1391
Lsp1109I	GCAGC	6 cut(s)	103, 471, 634, 902, 1445, 1581
LweI	GCATC	7 cut(s)	306, 388, 436, 714, 1230, 1495, 1567
MaeI	CTAG	4 cut(s)	708, 1271, 1301, 1454
MaeII	ACGT	1 cut(s)	1061
MaeIII	GTNAC	3 cut(s)	206, 940, 1057
MalI	GATC	6 cut(s)	62, 81, 122, 837, 1259, 1296
MbiI	CCGCTC	1 cut(s)	326
MboI	GATC	6 cut(s)	60, 79, 120, 835, 1257, 1294
MfeI	CAATTG	1 cut(s)	1113
MhlI	GDGCHC	1 cut(s)	979
MluCI	AATT	8 cut(s)	86, 222, 643, 790, 1113, 1477, 1513, 1637
MmeI	TCCRAC	4 cut(s)	813, 875, 1379, 1564
Mph1103I	ATGCAT	2 cut(s)	937, 1285
MseI	TTAA	7 cut(s)	393, 636, 717, 822, 1341, 1562, 1620
MslI	CAYNNNNRTG	2 cut(s)	204, 930
MspA1I	CMGCKG	2 cut(s)	625, 893
MspI	CCGG	4 cut(s)	129, 511, 1460, 1574
MspR9I	CCNGG	2 cut(s)	130, 512
MunI	CAATTG	1 cut(s)	1113
Mva1269I	GAATGC	1 cut(s)	559
MvnI	CGCG	4 cut(s)	464, 508, 729, 1088
MwoI	GCNNNNNNNGC	7 cut(s)	176, 554, 596, 890, 896, 1357, 1430
NciI	CCSGG	2 cut(s)	130, 512
NcoI	CCATGG	1 cut(s)	1353
NdeI	CATATG	1 cut(s)	1330
NdeII	GATC	6 cut(s)	60, 79, 120, 835, 1257, 1294
NlaIV	GGNNCC	2 cut(s)	265, 1359
NmeAIII	GCCGAG	1 cut(s)	215
NmuCI	GTSAC	2 cut(s)	206, 940
NsiI	ATGCAT	2 cut(s)	937, 1285
NspI	RCATGY	5 cut(s)	375, 416, 478, 929, 1287
PalAI	GGCGCGCC	1 cut(s)	506
PauI	GCGCGC	2 cut(s)	462, 506
PceI	AGGCCT	1 cut(s)	1743
PciI	ACATGT	1 cut(s)	474
PctI	GAATGC	1 cut(s)	559
PfeI	GAWTC	5 cut(s)	66, 1090, 1315, 1670, 1679
PkrI	GCNGC	7 cut(s)	93, 188, 461, 624, 892, 1435, 1596
PscI	ACATGT	1 cut(s)	474
PspFI	CCCAGC	1 cut(s)	671
PspN4I	GGNNCC	2 cut(s)	265, 1359
PspPI	GGNCC	2 cut(s)	136, 336
PstNI	CAGNNNCTG	1 cut(s)	1508
PteI	GCGCGC	2 cut(s)	462, 506
PvuII	CAGCTG	2 cut(s)	625, 893
RsaI	GTAC	6 cut(s)	25, 50, 176, 479, 1635, 1704
RsaNI	GTAC	6 cut(s)	24, 49, 175, 478, 1634, 1703
RseI	CAYNNNNRTG	2 cut(s)	204, 930
SaqAI	TTAA	7 cut(s)	393, 636, 717, 822, 1341, 1562, 1620
SatI	GCNGC	7 cut(s)	92, 187, 460, 623, 891, 1434, 1595
Sau3AI	GATC	6 cut(s)	60, 79, 120, 835, 1257, 1294
Sau96I	GGNCC	2 cut(s)	136, 336
ScaI	AGTACT	1 cut(s)	1704
ScrFI	CCNGG	2 cut(s)	130, 512
SduI	GDGCHC	1 cut(s)	979
SfaNI	GCATC	7 cut(s)	306, 388, 436, 714, 1230, 1495, 1567
SfcI	CTRYAG	1 cut(s)	1674
SgsI	GGCGCGCC	1 cut(s)	506
SmiMI	CAYNNNNRTG	2 cut(s)	204, 930
SmlI	CTYRAG	2 cut(s)	365, 904
SmoI	CTYRAG	2 cut(s)	365, 904
Sse9I	AATT	8 cut(s)	86, 222, 643, 790, 1113, 1477, 1513, 1637
SseBI	AGGCCT	1 cut(s)	1743
SsiI	CCGC	4 cut(s)	186, 326, 590, 1002
SspMI	CTAG	4 cut(s)	708, 1271, 1301, 1454
StuI	AGGCCT	1 cut(s)	1743
StyD4I	CCNGG	2 cut(s)	128, 510
StyI	CCWWGG	1 cut(s)	1353
TaaI	ACNGT	3 cut(s)	23, 803, 1057
TaiI	ACGT	1 cut(s)	1064
TaqI	TCGA	6 cut(s)	82, 216, 332, 482, 1238, 1306
TasI	AATT	8 cut(s)	86, 222, 643, 790, 1113, 1477, 1513, 1637
TatI	WGTACW	4 cut(s)	48, 477, 1633, 1702
TauI	GCSGC	1 cut(s)	189
TfiI	GAWTC	5 cut(s)	66, 1090, 1315, 1670, 1679
Tru1I	TTAA	7 cut(s)	393, 636, 717, 822, 1341, 1562, 1620
Tru9I	TTAA	7 cut(s)	393, 636, 717, 822, 1341, 1562, 1620
TscAI	CASTG	4 cut(s)	316, 364, 1111, 1327
TseFI	GTSAC	2 cut(s)	206, 940
TseI	GCWGC	6 cut(s)	91, 459, 622, 890, 1433, 1594
Tsp45I	GTSAC	2 cut(s)	206, 940
TspDTI	ATGAA	6 cut(s)	275, 708, 1029, 1148, 1562, 1633
TspGWI	ACGGA	1 cut(s)	1603
TspRI	CASTG	4 cut(s)	316, 364, 1111, 1327
XapI	RAATTY	2 cut(s)	222, 790
XceI	RCATGY	5 cut(s)	375, 416, 478, 929, 1287
XspI	CTAG	4 cut(s)	708, 1271, 1301, 1454
ZrmI	AGTACT	1 cut(s)	1704
Zsp2I	ATGCAT	2 cut(s)	937, 1285

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.