Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0006777

Physical Location & Seq

Genomic Coordinates Reverse (-)

4773604 .. 4780573

Gene Structure 6970 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG058300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2073 bp

ATGCCTCAGGTGAGGATCATAGCGAAGAACTTCATGGACATGGTGGCTGCCTTGCCCGCCATGAAGCTCGATAAGCTCTACGACAACGCATTCATCTGCGAAGCCATTCTCAGGTCTCTGCCACCACTGGCCAAGAAATATGTTTTGCAAATGCTATGCGTCGAGCTTCCGGTCAATTCCAAGTCAATGGAGGAGTGGGTGCTCCCCGATGGGGCCTCCAAGCATCGAGTGGCGATTGATCGATTGGTTCAATTGAGAATATTCACCGAGACCAAGAAAAAGGGGGATGTTACATACACATTGAATCCTATATTTCAGACTAATCTCAAGAAGCTTCTGGTATACGGTGTAGTTTTGCCAAGAGAACCAATGCCTTCGAGTGTCACAGTGAGGCGTCCAAGCTCTGAGGAACTTGAGGCTTTTGCTCTAGAACAATGGGAGTGTTTCTTGCTGCAACTTATCAACTCATCTCAAACTGAAAGGCCATCAAACATCAGTTCGTCTATGATGAAAACTTTCCAGCGGGGTCTTGTGACTCAAAGAGATAGAGAAGCTCCTAGGTTAACTGAAAGTGGTTTCCAGTTCTTGCTGATGGATACAAATGCACAACTTTGGTACATCATCAGAGAATATATCACTAGCTCGGAGGAGCGCGGGATCGATTCGGCAGATTTGATTTCATTCCTGCTAGAGCTAAGTTTTCATGTTACAGGCGAGGCATATAACATAAATACATTGACTGAGGTTCAGAAAAATACGATCAAGGACTTCACAGATTTGGGATTGGTCAAACTTCAGCAGGGTAGGAAAGAGAGTTGGTTTATACCTACTAAATTAGCTACTAATCTTTCGGTGAGCTTGACAGACACATCATCAAGGAAACAGGGATTTGTGGTTGTGGAAACAAACTTTAGGCTCTATGCATACTCATCATCAAAATTGCATTGTGAAATTTTGCGTCTTTTCGCAAGGATAGAATATCAACTTCCGAACCTTATAGTTGGAGCAATAACAAAAGAAAGTCTGTATGGTGCTTTTGACAATTGCATCACTGCAGAACAGATAATTTCTTTTCTTCAGCAAAATGCACATCCACGTGTTGCGGAGAGAATACCATCTGTACCTGAGAATGTCACGGATCAGATCAGGCTCTGGGAAACTGATTTAAACAGAGTTGACATGACTACTGCATATTATTACGATGAATTTCCATCCAGGGATCTCTTTGACGGTGCTGTTGACTATGCGAGAAGCTATAATGGTTTGCTATGGGAGGCTCCAGATGATTCAAAAAAGATGCGTTTGGTGCATTTAGCTGTATCTGTCATCTCGTACTATGTGTTTCTCTTCTTGATTAAGAAACACACAAAACTCACATGCCACCAGGTTGTACTTGTAGCACCCGTTTCCATAGGGGCTTTGAGAAGATTGGTAGTCACTTCAATGGCGAAAATCGCAAGAGTCCTTCTGCAGTCACTGCTTAAAGCAATGAATTCGATTTTGGGACTGCTTGGAATTGCATTGATTCTCTATGGTCTTTGGATGGTTAGAGTTTGGGAGAGGGACATGGATAGCTCATCATCCTTTGATCAATATACTACCGCTCCCTGGGTTATCTGCACTTTTATTGGGGCTGGTGTTACCCTGTGCATAATAACAGGCATAGGTCATCTTGCTGCAAACTGTGGCAGTGGTTGTTGCCTCTCTTGTTATGCGTTGATTATCTGTATGCTTCTTCTATTGGAGACTGCAATGGCTGCAGATATACTCTTAAATTCTGACTGGGAGAAGGATCTCCCCTACGACCCGACTGGAAAGTTCAATGATTTCAGAGATTTTGTGGAGTCAAACTTCGACATGTTCAAGTGGATAGGCTTGCTGATCATCTTAGCTCAGGGTTTTTCGATCTTATTGGCCACGGCTTTAAGGTCCATAGGGCCAGAGCAAGTATCAAACTGTGACAGTGATGAAGAGTATGCCCCAGCAAGAGTCCCACTCATGAACCATATCGTTCAGCCACCAGAATACATCGTTGGTGCCAAGAATAGCAGTAACTGGAATTTGAACAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0000438 GO:0000439 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005675 GO:0006139 GO:0006259 GO:0006281 GO:0006289 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006464 GO:0006468 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0016070 GO:0016310 GO:0016591 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019538 GO:0030880 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032774 GO:0032806 GO:0032991 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044798 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0055029 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0070816 GO:0071704 GO:0080090 GO:0090304 GO:0090575 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576 GO:1902494 GO:1902554 GO:1902911 GO:1903506 GO:1990234 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03022 ko03420 ko05203 map03022 map03420 map05203

Pfam Domains

Protein Families

Tfb2

Protein Analysis

690

Amino Acids

78.08

Weight (kDa)

5.97

Isoelectric Point (pI)

42.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Tfb2	PF03849	14 - 365	1.3e-113	Transcription factor Tfb2
Tfb2_C	PF18307	380 - 433	5.9e-15	Transcription factor Tfb2 (p52) C-terminal domain
Tetraspanin	PF00335	493 - 594	1.7e-10	Tetraspanin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0006777)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G17020 AT4G17020 AT4G17020
fragaria_vesca	FvH4_3g09430
malus_domestica	MD05G1314300.v1.1 MD10G1295600.v1.1
prunus_persica	Prupe.4G044800_v2.0.a1 Prupe.4G044800_v2.0.a1 Prupe.4G044800_v2.0.a1 Prupe.4G044800_v2.0.a1 Prupe.4G044800_v2.0.a1 Prupe.4G044800_v2.0.a1 Prupe.4G044800_v2.0.a1 Prupe.4G044800_v2.0.a1
pyrus_communis	pycom05g29230 pycom10g24830
rosa_chinensis	RchiOBHm_Chr5g0008121
rosa_laevigata	RLG00000031537
rosa_multiflora	Rmu_sc0001626.1_g000005
rosa_roxburghii	Rroxscaffold_1G00068370
rosa_rugosa	Rorug04G0433400
rosa_samantha	Rh5AG061600 Rh5BG058300 Rh5CG068500 Rh5DG057600
rosa_wichuraiana	Rw5G005900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	2036
AccBSI	CCGCTC	1 cut(s)	1604
AccI	GTMKAC	1 cut(s)	342
AccII	CGCG	1 cut(s)	654
AciI	CCGC	5 cut(s)	57, 523, 654, 1103, 1602
AclWI	GGATC	5 cut(s)	23, 665, 1146, 1227, 1800
AcoI	YGGCCR	2 cut(s)	129, 1914
AcsI	RAATTY	5 cut(s)	951, 1205, 1492, 1774, 2059
AcuI	CTGAAG	2 cut(s)	779, 1061
AcvI	CACGTG	1 cut(s)	1097
AcyI	GRCGYC	1 cut(s)	394
AfaI	GTAC	4 cut(s)	617, 1122, 1334, 1392
AfiI	CCNNNNNNNGG	3 cut(s)	111, 211, 1608
AflIII	ACRYGT	2 cut(s)	1096, 1857
AgsI	TTSAA	7 cut(s)	251, 304, 1290, 1443, 1822, 1864, 2065
AjnI	CCWGG	3 cut(s)	1214, 1383, 1607
AjuI	GAANNNNNNNTTGG	4 cut(s)	1484, 1516, 2016, 2048
Alw21I	GWGCWC	1 cut(s)	204
Alw26I	GTCTC	3 cut(s)	120, 263, 1739
AlwI	GGATC	5 cut(s)	23, 665, 1146, 1227, 1800
AlwNI	CAGNNNCTG	3 cut(s)	1152, 1477, 2055
AoxI	GGCC	5 cut(s)	129, 213, 482, 1914, 1937
ApeKI	GCWGC	4 cut(s)	47, 451, 1676, 1757
ApoI	RAATTY	5 cut(s)	951, 1205, 1492, 1774, 2059
Asp700I	GAANNNNTTC	3 cut(s)	29, 105, 515
AspA2I	CCTAGG	1 cut(s)	557
AspLEI	GCGC	1 cut(s)	654
AspS9I	GGNCC	3 cut(s)	213, 1929, 1937
AsuHPI	GGTGA	3 cut(s)	22, 256, 865
AvaII	GGWCC	1 cut(s)	1929
AvrII	CCTAGG	1 cut(s)	557
AxyI	CCTNAGG	1 cut(s)	6
BalI	TGGCCA	2 cut(s)	131, 1916
BanI	GGYRCC	1 cut(s)	2036
BbrPI	CACGTG	1 cut(s)	1097
Bbv12I	GWGCWC	1 cut(s)	204
BbvI	GCAGC	4 cut(s)	34, 438, 1663, 1744
BccI	CCATC	6 cut(s)	203, 493, 586, 1123, 1219, 1537
BceAI	ACGGC	1 cut(s)	1935
BcgI	CGANNNNNNTGC	2 cut(s)	1476, 1510
BciT130I	CCWGG	3 cut(s)	1216, 1385, 1609
BciVI	GTATCC	1 cut(s)	589
BclI	TGATCA	2 cut(s)	1588, 1881
BcoDI	GTCTC	3 cut(s)	120, 263, 1739
BfaI	CTAG	4 cut(s)	428, 558, 639, 689
BfmI	CTRYAG	3 cut(s)	1053, 1469, 1758
BfuI	GTATCC	1 cut(s)	589
BisI	GCNGC	4 cut(s)	48, 452, 1677, 1758
BlnI	CCTAGG	1 cut(s)	557
BlsI	GCNGC	4 cut(s)	49, 453, 1678, 1759
Bme1390I	CCNGG	3 cut(s)	1216, 1385, 1609
Bme18I	GGWCC	1 cut(s)	1929
BmgT120I	GGNCC	3 cut(s)	213, 1929, 1937
BmiI	GGNNCC	3 cut(s)	214, 1278, 2038
BmrFI	CCNGG	3 cut(s)	1216, 1385, 1609
BmrI	ACTGGG	1 cut(s)	1792
BmsI	GCATC	3 cut(s)	232, 1056, 1287
BmuI	ACTGGG	1 cut(s)	1792
BplI	GAGNNNNNCTC	2 cut(s)	1980, 2012
BpmI	CTGGAG	1 cut(s)	1263
Bpu10I	CCTNAGC	1 cut(s)	1893
BpuEI	CTTGAG	2 cut(s)	311, 434
Bsa29I	ATCGAT	2 cut(s)	241, 660
BsaAI	YACGTR	1 cut(s)	1097
BsaHI	GRCGYC	1 cut(s)	394
BsaI	GGTCTC	2 cut(s)	120, 263
BsaJI	CCNNGG	5 cut(s)	557, 1215, 1607, 1608, 1917
BsaWI	WCCGGW	1 cut(s)	169
BsaXI	ACNNNNNCTCC	2 cut(s)	1588, 1618
Bsc4I	CCNNNNNNNGG	3 cut(s)	111, 211, 1608
Bse1I	ACTGG	5 cut(s)	132, 580, 1787, 1816, 2060
Bse21I	CCTNAGG	1 cut(s)	6
Bse3DI	GCAATG	2 cut(s)	1494, 1758
BseBI	CCWGG	3 cut(s)	1216, 1385, 1609
BseCI	ATCGAT	2 cut(s)	241, 660
BseDI	CCNNGG	5 cut(s)	557, 1215, 1607, 1608, 1917
BseGI	GGATG	5 cut(s)	292, 1090, 1211, 1548, 1580
BseLI	CCNNNNNNNGG	3 cut(s)	111, 211, 1608
BseMI	GCAATG	2 cut(s)	1494, 1758
BseMII	CTCAG	6 cut(s)	20, 124, 396, 732, 1116, 1907
BseNI	ACTGG	5 cut(s)	132, 580, 1787, 1816, 2060
BseRI	GAGGAG	2 cut(s)	206, 662
BseXI	GCAGC	4 cut(s)	34, 438, 1663, 1744
BseYI	CCCAGC	1 cut(s)	1981
BsgI	GTGCAG	1 cut(s)	1603
Bsh1236I	CGCG	1 cut(s)	654
BshFI	GGCC	5 cut(s)	131, 215, 484, 1916, 1939
BshNI	GGYRCC	1 cut(s)	2036
BshVI	ATCGAT	2 cut(s)	241, 660
BsiHKAI	GWGCWC	1 cut(s)	204
BsiSI	CCGG	1 cut(s)	170
BslFI	GGGAC	3 cut(s)	1518, 1577, 1976
BslI	CCNNNNNNNGG	3 cut(s)	111, 211, 1608
BsmAI	GTCTC	3 cut(s)	120, 263, 1739
BsmFI	GGGAC	3 cut(s)	1518, 1577, 1976
BsmI	GAATGC	1 cut(s)	89
BsnI	GGCC	5 cut(s)	131, 215, 484, 1916, 1939
Bso31I	GGTCTC	2 cut(s)	120, 263
Bsp1286I	GDGCHC	1 cut(s)	204
BspACI	CCGC	5 cut(s)	57, 523, 654, 1103, 1602
BspANI	GGCC	5 cut(s)	131, 215, 484, 1916, 1939
BspCNI	CTCAG	6 cut(s)	19, 123, 397, 733, 1117, 1906
BspDI	ATCGAT	2 cut(s)	241, 660
BspFNI	CGCG	1 cut(s)	654
BspHI	TCATGA	1 cut(s)	1998
BspLI	GGNNCC	3 cut(s)	214, 1278, 2038
BspMAI	CTGCAG	3 cut(s)	1057, 1473, 1762
BspPI	GGATC	5 cut(s)	23, 665, 1146, 1227, 1800
BspT107I	GGYRCC	1 cut(s)	2036
BspTNI	GGTCTC	2 cut(s)	120, 263
BsrBI	CCGCTC	1 cut(s)	1604
BsrDI	GCAATG	2 cut(s)	1494, 1758
BsrI	ACTGG	5 cut(s)	132, 580, 1787, 1816, 2060
BssECI	CCNNGG	5 cut(s)	557, 1215, 1607, 1608, 1917
BssNAI	GTATAC	1 cut(s)	343
BssNI	GRCGYC	1 cut(s)	394
BssT1I	CCWWGG	1 cut(s)	557
Bst1107I	GTATAC	1 cut(s)	343
Bst2UI	CCWGG	3 cut(s)	1216, 1385, 1609
Bst4CI	ACNGT	6 cut(s)	347, 388, 1232, 1685, 1958, 1964
Bst6I	CTCTTC	2 cut(s)	1352, 1965
BstACI	GRCGYC	1 cut(s)	394
BstAPI	GCANNNNNTGC	2 cut(s)	1477, 1757
BstBAI	YACGTR	1 cut(s)	1097
BstC8I	GCNNGC	2 cut(s)	57, 1877
BstDEI	CTNAG	8 cut(s)	6, 110, 405, 695, 741, 1125, 1888, 1893
BstDSI	CCRYGG	1 cut(s)	1917
BstF5I	GGATG	5 cut(s)	292, 1090, 1211, 1548, 1580
BstFNI	CGCG	1 cut(s)	654
BstHHI	GCGC	1 cut(s)	654
BstMAI	GTCTC	3 cut(s)	120, 263, 1739
BstMWI	GCNNNNNNNGC	6 cut(s)	56, 73, 1306, 1454, 1477, 1757
BstNI	CCWGG	3 cut(s)	1216, 1385, 1609
BstNSI	RCATGY	2 cut(s)	1380, 1861
BstSCI	CCNGG	3 cut(s)	1214, 1383, 1607
BstSFI	CTRYAG	3 cut(s)	1053, 1469, 1758
BstUI	CGCG	1 cut(s)	654
BstV1I	GCAGC	4 cut(s)	34, 438, 1663, 1744
BstX2I	RGATCY	2 cut(s)	1219, 1792
BstXI	CCANNNNNNTGG	1 cut(s)	187
BstYI	RGATCY	2 cut(s)	1219, 1792
BstZ17I	GTATAC	1 cut(s)	343
Bsu15I	ATCGAT	2 cut(s)	241, 660
Bsu36I	CCTNAGG	1 cut(s)	6
BsuI	GTATCC	1 cut(s)	589
BsuRI	GGCC	5 cut(s)	131, 215, 484, 1916, 1939
BsuTUI	ATCGAT	2 cut(s)	241, 660
BtgI	CCRYGG	1 cut(s)	1917
BtsCI	GGATG	5 cut(s)	292, 1090, 1211, 1548, 1580
BtsI	GCAGTG	3 cut(s)	1050, 1475, 1696
BtsIMutI	CAGTG	6 cut(s)	125, 393, 1050, 1475, 1696, 1969
Cac8I	GCNNGC	2 cut(s)	57, 1877
CaiI	CAGNNNCTG	3 cut(s)	1152, 1477, 2055
CciI	TCATGA	1 cut(s)	1998
CfoI	GCGC	1 cut(s)	654
Cfr13I	GGNCC	3 cut(s)	213, 1929, 1937
ClaI	ATCGAT	2 cut(s)	241, 660
CseI	GACGC	3 cut(s)	148, 383, 947
CsiI	ACCWGGT	1 cut(s)	1383
Csp6I	GTAC	4 cut(s)	616, 1121, 1333, 1391
CviAII	CATG	9 cut(s)	34, 40, 61, 704, 1180, 1377, 1567, 1858, 1999
CviQI	GTAC	4 cut(s)	616, 1121, 1333, 1391
DdeI	CTNAG	8 cut(s)	6, 110, 405, 695, 741, 1125, 1888, 1893
DraI	TTTAAA	1 cut(s)	1167
EaeI	YGGCCR	2 cut(s)	129, 1914
Eam1104I	CTCTTC	2 cut(s)	1352, 1965
EarI	CTCTTC	2 cut(s)	1352, 1965
Eco130I	CCWWGG	1 cut(s)	557
Eco31I	GGTCTC	2 cut(s)	120, 263
Eco47I	GGWCC	1 cut(s)	1929
Eco57I	CTGAAG	2 cut(s)	779, 1061
Eco72I	CACGTG	1 cut(s)	1097
Eco81I	CCTNAGG	1 cut(s)	6
EcoO109I	RGGNCCY	1 cut(s)	213
EcoRI	GAATTC	1 cut(s)	1492
EcoRII	CCWGG	3 cut(s)	1214, 1383, 1607
EcoT14I	CCWWGG	1 cut(s)	557
EcoT22I	ATGCAT	1 cut(s)	925
ErhI	CCWWGG	1 cut(s)	557
FaeI	CATG	9 cut(s)	37, 43, 64, 707, 1183, 1380, 1570, 1861, 2002
FaqI	GGGAC	3 cut(s)	1518, 1577, 1976
FatI	CATG	9 cut(s)	33, 39, 60, 703, 1179, 1376, 1566, 1857, 1998
FauI	CCCGC	3 cut(s)	64, 516, 647
FbaI	TGATCA	2 cut(s)	1588, 1881
FblI	GTMKAC	1 cut(s)	342
Fnu4HI	GCNGC	4 cut(s)	48, 452, 1677, 1758
FokI	GGATG	5 cut(s)	299, 1077, 1198, 1555, 1567
Fsp4HI	GCNGC	4 cut(s)	48, 452, 1677, 1758
FspBI	CTAG	4 cut(s)	428, 558, 639, 689
GlaI	GCGC	1 cut(s)	653
GluI	GCNGC	4 cut(s)	48, 452, 1677, 1758
GsaI	CCCAGC	1 cut(s)	1985
GsuI	CTGGAG	1 cut(s)	1263
HaeIII	GGCC	5 cut(s)	131, 215, 484, 1916, 1939
HapII	CCGG	1 cut(s)	170
HgaI	GACGC	3 cut(s)	148, 383, 947
HhaI	GCGC	1 cut(s)	654
Hin1I	GRCGYC	1 cut(s)	394
Hin1II	CATG	9 cut(s)	37, 43, 64, 707, 1183, 1380, 1570, 1861, 2002
Hin6I	GCGC	1 cut(s)	652
HinP1I	GCGC	1 cut(s)	652
HincII	GTYRAC	3 cut(s)	564, 1177, 1240
HindII	GTYRAC	3 cut(s)	564, 1177, 1240
HindIII	AAGCTT	1 cut(s)	332
HinfI	GANTC	8 cut(s)	304, 535, 662, 1286, 1461, 1525, 1844, 1989
HpaI	GTTAAC	1 cut(s)	564
HpaII	CCGG	1 cut(s)	170
HphI	GGTGA	3 cut(s)	22, 256, 865
Hpy166II	GTNNAC	4 cut(s)	343, 564, 1177, 1240
Hpy188I	TCNGA	9 cut(s)	318, 406, 626, 646, 750, 990, 1143, 1780, 1832
Hpy188III	TCNNGA	5 cut(s)	328, 428, 1280, 1351, 1999
Hpy8I	GTNNAC	4 cut(s)	343, 564, 1177, 1240
Hpy99I	CGWCG	1 cut(s)	164
HpyAV	CCTTC	3 cut(s)	384, 1475, 1783
HpyCH4III	ACNGT	6 cut(s)	347, 388, 1232, 1685, 1958, 1964
HpyCH4IV	ACGT	1 cut(s)	1096
HpyF10VI	GCNNNNNNNGC	6 cut(s)	56, 73, 1306, 1454, 1477, 1757
HpyF3I	CTNAG	8 cut(s)	6, 110, 405, 695, 741, 1125, 1888, 1893
HpySE526I	ACGT	1 cut(s)	1096
Hsp92I	GRCGYC	1 cut(s)	394
Hsp92II	CATG	9 cut(s)	37, 43, 64, 707, 1183, 1380, 1570, 1861, 2002
HspAI	GCGC	1 cut(s)	652
Ksp22I	TGATCA	2 cut(s)	1588, 1881
KspAI	GTTAAC	1 cut(s)	564
LmnI	GCTCC	6 cut(s)	207, 559, 649, 1004, 1282, 1609
Lsp1109I	GCAGC	4 cut(s)	34, 438, 1663, 1744
LweI	GCATC	3 cut(s)	232, 1056, 1287
MabI	ACCWGGT	1 cut(s)	1383
MaeI	CTAG	4 cut(s)	428, 558, 639, 689
MaeII	ACGT	1 cut(s)	1096
MbiI	CCGCTC	1 cut(s)	1604
MboII	GAAGA	6 cut(s)	37, 1067, 1339, 1437, 1727, 1982
MfeI	CAATTG	2 cut(s)	251, 1042
MflI	RGATCY	2 cut(s)	1219, 1792
MhlI	GDGCHC	1 cut(s)	204
MlsI	TGGCCA	2 cut(s)	131, 1916
MluNI	TGGCCA	2 cut(s)	131, 1916
MlyI	GAGTC	4 cut(s)	529, 1470, 1853, 1998
MmeI	TCCRAC	1 cut(s)	982
Mox20I	TGGCCA	2 cut(s)	131, 1916
Mph1103I	ATGCAT	1 cut(s)	925
MroXI	GAANNNNTTC	3 cut(s)	29, 105, 515
MscI	TGGCCA	2 cut(s)	131, 1916
MseI	TTAA	6 cut(s)	563, 1166, 1356, 1482, 1772, 1925
MslI	CAYNNNNRTG	3 cut(s)	38, 1095, 1442
Msp20I	TGGCCA	2 cut(s)	131, 1916
MspA1I	CMGCKG	1 cut(s)	523
MspI	CCGG	1 cut(s)	170
MspR9I	CCNGG	3 cut(s)	1216, 1385, 1609
MunI	CAATTG	2 cut(s)	251, 1042
Mva1269I	GAATGC	1 cut(s)	89
MvaI	CCWGG	3 cut(s)	1216, 1385, 1609
MvnI	CGCG	1 cut(s)	654
MwoI	GCNNNNNNNGC	6 cut(s)	56, 73, 1306, 1454, 1477, 1757
NlaIII	CATG	9 cut(s)	37, 43, 64, 707, 1183, 1380, 1570, 1861, 2002
NlaIV	GGNNCC	3 cut(s)	214, 1278, 2038
NmuCI	GTSAC	6 cut(s)	382, 532, 1132, 1435, 1473, 1958
NsiI	ATGCAT	1 cut(s)	925
NspI	RCATGY	2 cut(s)	1380, 1861
PagI	TCATGA	1 cut(s)	1998
PasI	CCCWGGG	1 cut(s)	1608
PciI	ACATGT	1 cut(s)	1857
PctI	GAATGC	1 cut(s)	89
PdmI	GAANNNNTTC	3 cut(s)	29, 105, 515
PfeI	GAWTC	4 cut(s)	304, 662, 1286, 1525
PkrI	GCNGC	4 cut(s)	49, 453, 1678, 1759
PleI	GAGTC	4 cut(s)	529, 1469, 1852, 1997
PmaCI	CACGTG	1 cut(s)	1097
PmlI	CACGTG	1 cut(s)	1097
PpsI	GAGTC	4 cut(s)	529, 1469, 1852, 1997
Ppu21I	YACGTR	1 cut(s)	1097
PscI	ACATGT	1 cut(s)	1857
Psp6I	CCWGG	3 cut(s)	1214, 1383, 1607
PspCI	CACGTG	1 cut(s)	1097
PspFI	CCCAGC	1 cut(s)	1981
PspGI	CCWGG	3 cut(s)	1214, 1383, 1607
PspN4I	GGNNCC	3 cut(s)	214, 1278, 2038
PspPI	GGNCC	3 cut(s)	213, 1929, 1937
PstI	CTGCAG	3 cut(s)	1057, 1473, 1762
PstNI	CAGNNNCTG	3 cut(s)	1152, 1477, 2055
PsuI	RGATCY	2 cut(s)	1219, 1792
RsaI	GTAC	4 cut(s)	617, 1122, 1334, 1392
RsaNI	GTAC	4 cut(s)	616, 1121, 1333, 1391
RseI	CAYNNNNRTG	3 cut(s)	38, 1095, 1442
SaqAI	TTAA	6 cut(s)	563, 1166, 1356, 1482, 1772, 1925
SatI	GCNGC	4 cut(s)	48, 452, 1677, 1758
Sau96I	GGNCC	3 cut(s)	213, 1929, 1937
SchI	GAGTC	4 cut(s)	529, 1470, 1853, 1998
ScrFI	CCNGG	3 cut(s)	1216, 1385, 1609
SduI	GDGCHC	1 cut(s)	204
SexAI	ACCWGGT	1 cut(s)	1383
SfaNI	GCATC	3 cut(s)	232, 1056, 1287
SfcI	CTRYAG	3 cut(s)	1053, 1469, 1758
SinI	GGWCC	1 cut(s)	1929
SmiMI	CAYNNNNRTG	3 cut(s)	38, 1095, 1442
SmlI	CTYRAG	2 cut(s)	326, 413
SmoI	CTYRAG	2 cut(s)	326, 413
SsiI	CCGC	5 cut(s)	57, 523, 654, 1103, 1602
SspI	AATATT	1 cut(s)	261
SspMI	CTAG	4 cut(s)	428, 558, 639, 689
StyD4I	CCNGG	3 cut(s)	1214, 1383, 1607
StyI	CCWWGG	1 cut(s)	557
TaaI	ACNGT	6 cut(s)	347, 388, 1232, 1685, 1958, 1964
TaiI	ACGT	1 cut(s)	1099
TaqI	TCGA	9 cut(s)	69, 162, 226, 241, 377, 660, 1496, 1854, 1904
TatI	WGTACW	1 cut(s)	1390
TfiI	GAWTC	4 cut(s)	304, 662, 1286, 1525
Tru1I	TTAA	6 cut(s)	563, 1166, 1356, 1482, 1772, 1925
Tru9I	TTAA	6 cut(s)	563, 1166, 1356, 1482, 1772, 1925
TscAI	CASTG	6 cut(s)	132, 393, 1057, 1482, 1696, 1969
TseFI	GTSAC	6 cut(s)	382, 532, 1132, 1435, 1473, 1958
TseI	GCWGC	4 cut(s)	47, 451, 1676, 1757
Tsp45I	GTSAC	6 cut(s)	382, 532, 1132, 1435, 1473, 1958
TspGWI	ACGGA	1 cut(s)	1151
TspRI	CASTG	6 cut(s)	132, 393, 1057, 1482, 1696, 1969
VpaK11BI	GGWCC	1 cut(s)	1929
XapI	RAATTY	5 cut(s)	951, 1205, 1492, 1774, 2059
XbaI	TCTAGA	1 cut(s)	427
XceI	RCATGY	2 cut(s)	1380, 1861
XcmI	CCANNNNNNNNNTGG	1 cut(s)	226
XmaJI	CCTAGG	1 cut(s)	557
XmiI	GTMKAC	1 cut(s)	342
XmnI	GAANNNNTTC	3 cut(s)	29, 105, 515
XspI	CTAG	4 cut(s)	428, 558, 639, 689
Zsp2I	ATGCAT	1 cut(s)	925

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.