A Receptor for Ubiquitination Targets
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g24880 |
| rosa_chinensis | RchiOBHm_Chr5g0044501 |
| rosa_laevigata | RLG00000034276 |
| rosa_multiflora | Rmu_co8185722.1_g000001 Rmu_sc0011598.1_g000002 Rmu_ssc0000151.1_g000013 |
| rosa_roxburghii | Rroxscaffold_1G00036510 |
| rosa_rugosa | Rorug05G0214600 |
| rosa_samantha | Rh5BG306300 Rh5CG333200 Rh5DG315600 |
| rosa_wichuraiana | Rw5G027630 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 79 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 164 |
| AciI | CCGC | 1 cut(s) | 122 |
| AfaI | GTAC | 1 cut(s) | 197 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 116, 164 |
| AgeI | ACCGGT | 1 cut(s) | 37 |
| AgsI | TTSAA | 3 cut(s) | 20, 68, 152 |
| AjnI | CCWGG | 1 cut(s) | 109 |
| Alw21I | GWGCWC | 1 cut(s) | 172 |
| AsiGI | ACCGGT | 1 cut(s) | 37 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 147 |
| AsuHPI | GGTGA | 1 cut(s) | 22 |
| BbsI | GAAGAC | 1 cut(s) | 232 |
| Bbv12I | GWGCWC | 1 cut(s) | 172 |
| BciT130I | CCWGG | 1 cut(s) | 111 |
| BclI | TGATCA | 1 cut(s) | 187 |
| BfaI | CTAG | 2 cut(s) | 24, 256 |
| BfuAI | ACCTGC | 1 cut(s) | 79 |
| Bme1390I | CCNGG | 1 cut(s) | 111 |
| BmiI | GGNNCC | 1 cut(s) | 36 |
| BmrFI | CCNGG | 1 cut(s) | 111 |
| BmrI | ACTGGG | 1 cut(s) | 152 |
| BmuI | ACTGGG | 1 cut(s) | 152 |
| BpiI | GAAGAC | 1 cut(s) | 232 |
| BsaWI | WCCGGW | 1 cut(s) | 37 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 116, 164 |
| Bse118I | RCCGGY | 2 cut(s) | 37, 102 |
| Bse1I | ACTGG | 2 cut(s) | 158, 197 |
| Bse3DI | GCAATG | 1 cut(s) | 81 |
| BseBI | CCWGG | 1 cut(s) | 111 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 116, 164 |
| BseMI | GCAATG | 1 cut(s) | 81 |
| BseNI | ACTGG | 2 cut(s) | 158, 197 |
| BsgI | GTGCAG | 1 cut(s) | 83 |
| BshTI | ACCGGT | 1 cut(s) | 37 |
| BsiHKAI | GWGCWC | 1 cut(s) | 172 |
| BsiSI | CCGG | 2 cut(s) | 38, 103 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 116, 164 |
| Bsp1286I | GDGCHC | 1 cut(s) | 172 |
| Bsp143I | GATC | 1 cut(s) | 187 |
| BspACI | CCGC | 1 cut(s) | 122 |
| BspLI | GGNNCC | 1 cut(s) | 36 |
| BspMI | ACCTGC | 1 cut(s) | 79 |
| BsrDI | GCAATG | 1 cut(s) | 81 |
| BsrFI | RCCGGY | 2 cut(s) | 37, 102 |
| BsrI | ACTGG | 2 cut(s) | 158, 197 |
| BssAI | RCCGGY | 2 cut(s) | 37, 102 |
| BssMI | GATC | 1 cut(s) | 187 |
| Bst2UI | CCWGG | 1 cut(s) | 111 |
| Bst6I | CTCTTC | 3 cut(s) | 84, 126, 138 |
| BstC8I | GCNNGC | 1 cut(s) | 98 |
| BstKTI | GATC | 1 cut(s) | 190 |
| BstMBI | GATC | 1 cut(s) | 187 |
| BstNI | CCWGG | 1 cut(s) | 111 |
| BstSCI | CCNGG | 1 cut(s) | 109 |
| BstV2I | GAAGAC | 1 cut(s) | 232 |
| BtsIMutI | CAGTG | 1 cut(s) | 190 |
| BveI | ACCTGC | 1 cut(s) | 79 |
| Cac8I | GCNNGC | 1 cut(s) | 98 |
| Cfr10I | RCCGGY | 2 cut(s) | 37, 102 |
| Csp6I | GTAC | 1 cut(s) | 196 |
| CspAI | ACCGGT | 1 cut(s) | 37 |
| CviJI | RGCY | 3 cut(s) | 96, 106, 209 |
| CviKI_1 | RGCY | 3 cut(s) | 96, 106, 209 |
| CviQI | GTAC | 1 cut(s) | 196 |
| DpnI | GATC | 1 cut(s) | 189 |
| DpnII | GATC | 1 cut(s) | 187 |
| Eam1104I | CTCTTC | 3 cut(s) | 84, 126, 138 |
| EarI | CTCTTC | 3 cut(s) | 84, 126, 138 |
| EcoRII | CCWGG | 1 cut(s) | 109 |
| FaiI | YATR | 3 cut(s) | 50, 85, 87 |
| FbaI | TGATCA | 1 cut(s) | 187 |
| FspBI | CTAG | 2 cut(s) | 24, 256 |
| HapII | CCGG | 2 cut(s) | 38, 103 |
| HinfI | GANTC | 3 cut(s) | 79, 148, 228 |
| HpaII | CCGG | 2 cut(s) | 38, 103 |
| HphI | GGTGA | 1 cut(s) | 22 |
| Hpy188III | TCNNGA | 1 cut(s) | 178 |
| HpyAV | CCTTC | 1 cut(s) | 130 |
| HpyCH4V | TGCA | 2 cut(s) | 74, 100 |
| Ksp22I | TGATCA | 1 cut(s) | 187 |
| Kzo9I | GATC | 1 cut(s) | 187 |
| MaeI | CTAG | 2 cut(s) | 24, 256 |
| MalI | GATC | 1 cut(s) | 189 |
| MboI | GATC | 1 cut(s) | 187 |
| MboII | GAAGA | 5 cut(s) | 101, 140, 143, 155, 237 |
| MhlI | GDGCHC | 1 cut(s) | 172 |
| MlyI | GAGTC | 1 cut(s) | 222 |
| MmeI | TCCRAC | 1 cut(s) | 202 |
| MnlI | CCTC | 3 cut(s) | 6, 25, 51 |
| MroXI | GAANNNNTTC | 1 cut(s) | 147 |
| MseI | TTAA | 1 cut(s) | 54 |
| MspI | CCGG | 2 cut(s) | 38, 103 |
| MspR9I | CCNGG | 1 cut(s) | 111 |
| MvaI | CCWGG | 1 cut(s) | 111 |
| NdeII | GATC | 1 cut(s) | 187 |
| NlaIV | GGNNCC | 1 cut(s) | 36 |
| PdmI | GAANNNNTTC | 1 cut(s) | 147 |
| PfeI | GAWTC | 2 cut(s) | 79, 148 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 164 |
| PinAI | ACCGGT | 1 cut(s) | 37 |
| PleI | GAGTC | 1 cut(s) | 222 |
| PpsI | GAGTC | 1 cut(s) | 222 |
| Psp6I | CCWGG | 1 cut(s) | 109 |
| PspGI | CCWGG | 1 cut(s) | 109 |
| PspN4I | GGNNCC | 1 cut(s) | 36 |
| RsaI | GTAC | 1 cut(s) | 197 |
| RsaNI | GTAC | 1 cut(s) | 196 |
| SaqAI | TTAA | 1 cut(s) | 54 |
| Sau3AI | GATC | 1 cut(s) | 187 |
| SchI | GAGTC | 1 cut(s) | 222 |
| ScrFI | CCNGG | 1 cut(s) | 111 |
| SduI | GDGCHC | 1 cut(s) | 172 |
| SetI | ASST | 3 cut(s) | 25, 73, 141 |
| SsiI | CCGC | 1 cut(s) | 122 |
| SspI | AATATT | 1 cut(s) | 249 |
| SspMI | CTAG | 2 cut(s) | 24, 256 |
| StyD4I | CCNGG | 1 cut(s) | 109 |
| TfiI | GAWTC | 2 cut(s) | 79, 148 |
| Tru1I | TTAA | 1 cut(s) | 54 |
| Tru9I | TTAA | 1 cut(s) | 54 |
| TscAI | CASTG | 1 cut(s) | 197 |
| TspDTI | ATGAA | 1 cut(s) | 102 |
| TspRI | CASTG | 1 cut(s) | 197 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 164 |
| XmnI | GAANNNNTTC | 1 cut(s) | 147 |
| XspI | CTAG | 2 cut(s) | 24, 256 |