Belongs to the protein kinase superfamily
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0387671 RchiOBHm_Chr4g0425071 |
| rosa_laevigata | RLG00000020037 |
| rosa_roxburghii | Rroxscaffold_3G00220840 Rroxscaffold_3G00234360 |
| rosa_rugosa | Rorug01G0076000 |
| rosa_samantha | Rh2BG244800 Rh3BG352400 Rh4BG127800 Rh4DG199900 Rh5AG231000 Rh5BG426600 Rh5CG155100 Rh5DG237000 Rh6BG289200 Rh7BG041700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 2 cut(s) | 148, 340 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 34, 35, 36 |
| AgsI | TTSAA | 4 cut(s) | 22, 349, 386, 400 |
| AluBI | AGCT | 1 cut(s) | 361 |
| AluI | AGCT | 1 cut(s) | 361 |
| AoxI | GGCC | 1 cut(s) | 24 |
| ApeKI | GCWGC | 1 cut(s) | 185 |
| ApoI | RAATTY | 2 cut(s) | 148, 340 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 344 |
| AspS9I | GGNCC | 2 cut(s) | 25, 173 |
| AsuHPI | GGTGA | 1 cut(s) | 130 |
| AvaII | GGWCC | 1 cut(s) | 173 |
| BbvI | GCAGC | 1 cut(s) | 197 |
| BccI | CCATC | 1 cut(s) | 334 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 47, 81 |
| BfaI | CTAG | 1 cut(s) | 403 |
| BfmI | CTRYAG | 1 cut(s) | 183 |
| BisI | GCNGC | 1 cut(s) | 186 |
| BlsI | GCNGC | 1 cut(s) | 187 |
| Bme18I | GGWCC | 1 cut(s) | 173 |
| BmgT120I | GGNCC | 2 cut(s) | 25, 173 |
| BmiI | GGNNCC | 1 cut(s) | 27 |
| BsaJI | CCNNGG | 1 cut(s) | 81 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 34, 35, 36 |
| Bse1I | ACTGG | 1 cut(s) | 208 |
| Bse3DI | GCAATG | 1 cut(s) | 189 |
| BseDI | CCNNGG | 1 cut(s) | 81 |
| BseGI | GGATG | 2 cut(s) | 13, 45 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 34, 35, 36 |
| BseMI | GCAATG | 1 cut(s) | 189 |
| BseMII | CTCAG | 2 cut(s) | 272, 321 |
| BseNI | ACTGG | 1 cut(s) | 208 |
| BseXI | GCAGC | 1 cut(s) | 197 |
| BshFI | GGCC | 1 cut(s) | 26 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 34, 35, 36 |
| BsnI | GGCC | 1 cut(s) | 26 |
| Bsp143I | GATC | 1 cut(s) | 284 |
| BspANI | GGCC | 1 cut(s) | 26 |
| BspCNI | CTCAG | 2 cut(s) | 273, 322 |
| BspLI | GGNNCC | 1 cut(s) | 27 |
| BspMAI | CTGCAG | 1 cut(s) | 187 |
| BsrDI | GCAATG | 1 cut(s) | 189 |
| BsrI | ACTGG | 1 cut(s) | 208 |
| BssECI | CCNNGG | 1 cut(s) | 81 |
| BssMI | GATC | 1 cut(s) | 284 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 191 |
| BstC8I | GCNNGC | 1 cut(s) | 209 |
| BstDEI | CTNAG | 2 cut(s) | 281, 330 |
| BstF5I | GGATG | 2 cut(s) | 13, 45 |
| BstKTI | GATC | 1 cut(s) | 287 |
| BstMBI | GATC | 1 cut(s) | 284 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 191, 331 |
| BstSFI | CTRYAG | 1 cut(s) | 183 |
| BstV1I | GCAGC | 1 cut(s) | 197 |
| BsuRI | GGCC | 1 cut(s) | 26 |
| BtsCI | GGATG | 2 cut(s) | 13, 45 |
| Cac8I | GCNNGC | 1 cut(s) | 209 |
| Cfr13I | GGNCC | 2 cut(s) | 25, 173 |
| CviJI | RGCY | 5 cut(s) | 26, 188, 207, 293, 361 |
| CviKI_1 | RGCY | 5 cut(s) | 26, 188, 207, 293, 361 |
| DdeI | CTNAG | 2 cut(s) | 281, 330 |
| DpnI | GATC | 1 cut(s) | 286 |
| DpnII | GATC | 1 cut(s) | 284 |
| Eco47I | GGWCC | 1 cut(s) | 173 |
| EcoO109I | RGGNCCY | 2 cut(s) | 25, 173 |
| FaiI | YATR | 2 cut(s) | 121, 374 |
| Fnu4HI | GCNGC | 1 cut(s) | 186 |
| FokI | GGATG | 2 cut(s) | 20, 52 |
| Fsp4HI | GCNGC | 1 cut(s) | 186 |
| FspBI | CTAG | 1 cut(s) | 403 |
| GluI | GCNGC | 1 cut(s) | 186 |
| HaeIII | GGCC | 1 cut(s) | 26 |
| HinfI | GANTC | 2 cut(s) | 43, 228 |
| HphI | GGTGA | 1 cut(s) | 130 |
| Hpy188I | TCNGA | 5 cut(s) | 48, 58, 82, 147, 331 |
| Hpy188III | TCNNGA | 2 cut(s) | 14, 110 |
| HpyCH4V | TGCA | 4 cut(s) | 185, 194, 211, 266 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 191, 331 |
| HpyF3I | CTNAG | 2 cut(s) | 281, 330 |
| Kzo9I | GATC | 1 cut(s) | 284 |
| LmnI | GCTCC | 1 cut(s) | 48 |
| LpnPI | CCDG | 6 cut(s) | 27, 123, 156, 179, 189, 228 |
| Lsp1109I | GCAGC | 1 cut(s) | 197 |
| MaeI | CTAG | 1 cut(s) | 403 |
| MaeIII | GTNAC | 1 cut(s) | 69 |
| MalI | GATC | 1 cut(s) | 286 |
| MboI | GATC | 1 cut(s) | 284 |
| MluCI | AATT | 5 cut(s) | 105, 148, 160, 340, 350 |
| MnlI | CCTC | 3 cut(s) | 76, 146, 403 |
| MroXI | GAANNNNTTC | 1 cut(s) | 344 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 191, 331 |
| NdeII | GATC | 1 cut(s) | 284 |
| NlaIV | GGNNCC | 1 cut(s) | 27 |
| PdmI | GAANNNNTTC | 1 cut(s) | 344 |
| PfeI | GAWTC | 2 cut(s) | 43, 228 |
| PkrI | GCNGC | 1 cut(s) | 187 |
| PpuMI | RGGWCCY | 1 cut(s) | 173 |
| Psp5II | RGGWCCY | 1 cut(s) | 173 |
| PspN4I | GGNNCC | 1 cut(s) | 27 |
| PspPI | GGNCC | 2 cut(s) | 25, 173 |
| PspPPI | RGGWCCY | 1 cut(s) | 173 |
| PstI | CTGCAG | 1 cut(s) | 187 |
| SatI | GCNGC | 1 cut(s) | 186 |
| Sau3AI | GATC | 1 cut(s) | 284 |
| Sau96I | GGNCC | 2 cut(s) | 25, 173 |
| SetI | ASST | 2 cut(s) | 178, 363 |
| SfcI | CTRYAG | 1 cut(s) | 183 |
| SinI | GGWCC | 1 cut(s) | 173 |
| Sse9I | AATT | 5 cut(s) | 105, 148, 160, 340, 350 |
| SspI | AATATT | 1 cut(s) | 389 |
| SspMI | CTAG | 1 cut(s) | 403 |
| TasI | AATT | 5 cut(s) | 105, 148, 160, 340, 350 |
| TfiI | GAWTC | 2 cut(s) | 43, 228 |
| TseI | GCWGC | 1 cut(s) | 185 |
| TspDTI | ATGAA | 1 cut(s) | 56 |
| VpaK11BI | GGWCC | 1 cut(s) | 173 |
| XapI | RAATTY | 2 cut(s) | 148, 340 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 117, 148 |
| XmnI | GAANNNNTTC | 1 cut(s) | 344 |
| XspI | CTAG | 1 cut(s) | 403 |