Rh5CG255500

Non-specific lipid-transfer protein-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Forward (+)
27090503 .. 27090865
363 bp
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UTR
Exon/CDS
Intron
Rh5CG255500.1

Sequence Viewer

Length: 363 bp
ATGGGAAGCAACGATGAGTTGAAGTCGGAGGTGCTGGAGCAGATGAAACAGCAGAATGCCAGTAAAGTCATCGTCAAGAAGATCAGTCTCGTTTATCAGATCAAAATCGCACCCAAGAAAATTGGGTTCAATGAGTTGGCTTACACCATTGATCTGATCATGAAAGGAGAGGTCACGAAAGGGGCATACGAAGGAATAAGAAACGCATATATATATGCGATATTTTCGTTCAAGGTTGAGAATTTCGTGAAGATTGCGTTGGGGAAGATAAATCCCCAAATTGCTTTCAATCCTTTCATCGAGGGCTTAATTACTTGGCTCCAATCAATTTCTTCAAATACCAGTTACTTCAATTTAGCTTGA

Protein Analysis

120

Amino Acids

13.53

Weight (kDa)

9.27

Isoelectric Point (pI)

17.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 241
AgsI TTSAA 6 cut(s) 22, 130, 232, 289, 336, 352
AjuI GAANNNNNNNTTGG 2 cut(s) 242, 274
AluBI AGCT 1 cut(s) 359
AluI AGCT 1 cut(s) 359
Alw26I GTCTC 1 cut(s) 92
ApoI RAATTY 1 cut(s) 241
BclI TGATCA 1 cut(s) 156
BcoDI GTCTC 1 cut(s) 92
BmiI GGNNCC 1 cut(s) 320
BpmI CTGGAG 1 cut(s) 56
BsaBI GATNNNNATC 1 cut(s) 104
Bse1I ACTGG 2 cut(s) 60, 342
Bse8I GATNNNNATC 1 cut(s) 104
BseJI GATNNNNATC 1 cut(s) 104
BseNI ACTGG 2 cut(s) 60, 342
BsmAI GTCTC 1 cut(s) 92
BsmI GAATGC 1 cut(s) 61
Bsp143I GATC 4 cut(s) 81, 99, 151, 156
BspHI TCATGA 1 cut(s) 159
BspLI GGNNCC 1 cut(s) 320
BsrI ACTGG 2 cut(s) 60, 342
BssMI GATC 4 cut(s) 81, 99, 151, 156
BstKTI GATC 4 cut(s) 84, 102, 154, 159
BstMAI GTCTC 1 cut(s) 92
BstMBI GATC 4 cut(s) 81, 99, 151, 156
CciI TCATGA 1 cut(s) 159
CviAII CATG 1 cut(s) 160
CviJI RGCY 4 cut(s) 140, 306, 319, 359
CviKI_1 RGCY 4 cut(s) 140, 306, 319, 359
DpnI GATC 4 cut(s) 83, 101, 153, 158
DpnII GATC 4 cut(s) 81, 99, 151, 156
FaeI CATG 1 cut(s) 163
FaiI YATR 7 cut(s) 161, 187, 208, 210, 212, 214, 216
FatI CATG 1 cut(s) 159
FbaI TGATCA 1 cut(s) 156
GsuI CTGGAG 1 cut(s) 56
Hin1II CATG 1 cut(s) 163
Hpy188I TCNGA 3 cut(s) 28, 99, 156
Hpy188III TCNNGA 4 cut(s) 76, 160, 175, 247
HpyAV CCTTC 1 cut(s) 185
Hsp92II CATG 1 cut(s) 163
Ksp22I TGATCA 1 cut(s) 156
Kzo9I GATC 4 cut(s) 81, 99, 151, 156
LmnI GCTCC 2 cut(s) 37, 324
LpnPI CCDG 3 cut(s) 20, 73, 355
MaeIII GTNAC 2 cut(s) 172, 344
MalI GATC 4 cut(s) 83, 101, 153, 158
MboI GATC 4 cut(s) 81, 99, 151, 156
MboII GAAGA 4 cut(s) 91, 262, 277, 324
MluCI AATT 6 cut(s) 120, 241, 279, 309, 327, 352
MmeI TCCRAC 1 cut(s) 6
MnlI CCTC 3 cut(s) 22, 163, 295
MseI TTAA 1 cut(s) 308
Mva1269I GAATGC 1 cut(s) 61
NdeII GATC 4 cut(s) 81, 99, 151, 156
NlaIII CATG 1 cut(s) 163
NlaIV GGNNCC 1 cut(s) 320
NmuCI GTSAC 1 cut(s) 172
PagI TCATGA 1 cut(s) 159
PctI GAATGC 1 cut(s) 61
PspN4I GGNNCC 1 cut(s) 320
SaqAI TTAA 1 cut(s) 308
Sau3AI GATC 4 cut(s) 81, 99, 151, 156
SetI ASST 4 cut(s) 33, 174, 237, 361
Sse9I AATT 6 cut(s) 120, 241, 279, 309, 327, 352
TaqI TCGA 1 cut(s) 300
TasI AATT 6 cut(s) 120, 241, 279, 309, 327, 352
Tru1I TTAA 1 cut(s) 308
Tru9I TTAA 1 cut(s) 308
TseFI GTSAC 1 cut(s) 172
Tsp45I GTSAC 1 cut(s) 172
TspDTI ATGAA 3 cut(s) 59, 176, 286
XapI RAATTY 1 cut(s) 241
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.