Rh5CG342500

Ankyrin repeat-containing protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Reverse (-)
39260400 .. 39262788
2389 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG342500.1

Sequence Viewer

Length: 228 bp
ATGGGCCACTTATTAGCAGAGATAAAGTCCGAGATGCACTCCGGCTACTTGTTCAGGTGGAGGTTCAATTTGGAACCATTGTCTGGCCCACAAGCACACAATTCTGTACCGCCTGGAATTCAATTGATGGCTACTGGTAATGGAGATCCAACAGCAAGTGCACACACTGCCATCAACATTTTCTCGATACCTTCGCATCGTTTTCTAGAAAACAACAATAGTATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

75

Amino Acids

8.26

Weight (kDa)

6.48

Isoelectric Point (pI)

42.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0018616)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 83
AciI CCGC 1 cut(s) 110
AclWI GGATC 1 cut(s) 140
AcsI RAATTY 1 cut(s) 117
AfaI GTAC 1 cut(s) 108
AfiI CCNNNNNNNGG 1 cut(s) 83
AgsI TTSAA 2 cut(s) 67, 122
AjnI CCWGG 1 cut(s) 112
Alw21I GWGCWC 1 cut(s) 163
Alw44I GTGCAC 1 cut(s) 159
AlwI GGATC 1 cut(s) 140
AoxI GGCC 2 cut(s) 4, 85
ApaLI GTGCAC 1 cut(s) 159
ApoI RAATTY 1 cut(s) 117
AspS9I GGNCC 2 cut(s) 4, 86
BaeGI GKGCMC 1 cut(s) 163
Bbv12I GWGCWC 1 cut(s) 163
BccI CCATC 2 cut(s) 121, 179
BciT130I CCWGG 1 cut(s) 114
BfaI CTAG 1 cut(s) 206
Bme1390I CCNGG 1 cut(s) 114
BmgT120I GGNCC 2 cut(s) 4, 86
BmiI GGNNCC 1 cut(s) 75
BmrFI CCNGG 1 cut(s) 114
BmsI GCATC 2 cut(s) 24, 205
BplI GAGNNNNNCTC 2 cut(s) 23, 55
Bsc4I CCNNNNNNNGG 1 cut(s) 83
Bse1I ACTGG 1 cut(s) 139
BseBI CCWGG 1 cut(s) 114
BseLI CCNNNNNNNGG 1 cut(s) 83
BseNI ACTGG 1 cut(s) 139
BseSI GKGCMC 1 cut(s) 163
BshFI GGCC 2 cut(s) 6, 87
BsiHKAI GWGCWC 1 cut(s) 163
BsiSI CCGG 1 cut(s) 42
BslI CCNNNNNNNGG 1 cut(s) 83
BsnI GGCC 2 cut(s) 6, 87
Bsp1286I GDGCHC 1 cut(s) 163
Bsp143I GATC 1 cut(s) 145
BspACI CCGC 1 cut(s) 110
BspANI GGCC 2 cut(s) 6, 87
BspLI GGNNCC 1 cut(s) 75
BspPI GGATC 1 cut(s) 140
BsrI ACTGG 1 cut(s) 139
BssMI GATC 1 cut(s) 145
Bst2UI CCWGG 1 cut(s) 114
BstAPI GCANNNNNTGC 1 cut(s) 167
BstKTI GATC 1 cut(s) 148
BstMBI GATC 1 cut(s) 145
BstMWI GCNNNNNNNGC 1 cut(s) 167
BstNI CCWGG 1 cut(s) 114
BstSCI CCNGG 1 cut(s) 112
BstSLI GKGCMC 1 cut(s) 163
BstX2I RGATCY 1 cut(s) 145
BstYI RGATCY 1 cut(s) 145
BsuRI GGCC 2 cut(s) 6, 87
BtsI GCAGTG 1 cut(s) 165
BtsIMutI CAGTG 1 cut(s) 165
Cfr13I GGNCC 2 cut(s) 4, 86
Csp6I GTAC 1 cut(s) 107
CviJI RGCY 4 cut(s) 6, 45, 87, 131
CviKI_1 RGCY 4 cut(s) 6, 45, 87, 131
CviQI GTAC 1 cut(s) 107
DpnI GATC 1 cut(s) 147
DpnII GATC 1 cut(s) 145
EcoRI GAATTC 1 cut(s) 117
EcoRII CCWGG 1 cut(s) 112
FaiI YATR 1 cut(s) 224
FspBI CTAG 1 cut(s) 206
HaeIII GGCC 2 cut(s) 6, 87
HapII CCGG 1 cut(s) 42
HpaII CCGG 1 cut(s) 42
Hpy166II GTNNAC 1 cut(s) 161
Hpy188I TCNGA 1 cut(s) 31
Hpy188III TCNNGA 2 cut(s) 184, 206
Hpy8I GTNNAC 1 cut(s) 161
HpyAV CCTTC 1 cut(s) 201
HpyCH4V TGCA 2 cut(s) 37, 161
HpyF10VI GCNNNNNNNGC 1 cut(s) 167
Kzo9I GATC 1 cut(s) 145
LpnPI CCDG 6 cut(s) 40, 55, 69, 99, 120, 126
LweI GCATC 2 cut(s) 24, 205
MaeI CTAG 1 cut(s) 206
MalI GATC 1 cut(s) 147
MboI GATC 1 cut(s) 145
MfeI CAATTG 1 cut(s) 122
MflI RGATCY 1 cut(s) 145
MhlI GDGCHC 1 cut(s) 163
MluCI AATT 4 cut(s) 67, 100, 117, 122
MmeI TCCRAC 1 cut(s) 173
MnlI CCTC 1 cut(s) 54
MspI CCGG 1 cut(s) 42
MspR9I CCNGG 1 cut(s) 114
MunI CAATTG 1 cut(s) 122
MvaI CCWGG 1 cut(s) 114
MwoI GCNNNNNNNGC 1 cut(s) 167
NdeII GATC 1 cut(s) 145
NlaIV GGNNCC 1 cut(s) 75
PflMI CCANNNNNTGG 1 cut(s) 83
Psp6I CCWGG 1 cut(s) 112
PspGI CCWGG 1 cut(s) 112
PspN4I GGNNCC 1 cut(s) 75
PspPI GGNCC 2 cut(s) 4, 86
PsuI RGATCY 1 cut(s) 145
RsaI GTAC 1 cut(s) 108
RsaNI GTAC 1 cut(s) 107
Sau3AI GATC 1 cut(s) 145
Sau96I GGNCC 2 cut(s) 4, 86
ScrFI CCNGG 1 cut(s) 114
SduI GDGCHC 1 cut(s) 163
SetI ASST 3 cut(s) 59, 65, 193
SfaNI GCATC 2 cut(s) 24, 205
Sse9I AATT 4 cut(s) 67, 100, 117, 122
SsiI CCGC 1 cut(s) 110
SspMI CTAG 1 cut(s) 206
StyD4I CCNGG 1 cut(s) 112
TaqI TCGA 1 cut(s) 185
TasI AATT 4 cut(s) 67, 100, 117, 122
TscAI CASTG 1 cut(s) 172
TspRI CASTG 1 cut(s) 172
Van91I CCANNNNNTGG 1 cut(s) 83
VneI GTGCAC 1 cut(s) 159
XapI RAATTY 1 cut(s) 117
XbaI TCTAGA 1 cut(s) 205
XspI CTAG 1 cut(s) 206
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.