Nudix hydrolase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G46200 AT3G46200 AT3G46200 AT3G46200 AT3G46200 AT3G46200 |
| fragaria_vesca | FvH4_3g34680 FvH4_3g34680 FvH4_3g34680 FvH4_3g34680 |
| malus_domestica | MD03G1102800.v1.1 MD11G1116600.v1.1 |
| prunus_persica | Prupe.6G086900_v2.0.a1 Prupe.6G086900_v2.0.a1 Prupe.6G086900_v2.0.a1 |
| pyrus_communis | pycom11g09800 |
| rosa_chinensis | RchiOBHm_Chr5g0062361 |
| rosa_laevigata | RLG00000035553 |
| rosa_multiflora | Rmu_sc0005798.1_g000001 Rmu_sc0018052.1_g000006 Rmu_sc0019705.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00018320 |
| rosa_rugosa | Rorug05G0349000 |
| rosa_samantha | Rh5AG408900 Rh5BG422900 Rh5CG446900 Rh5DG437700 |
| rosa_wichuraiana | Rw5G038530 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 3 cut(s) | 142, 426, 461 |
| AcuI | CTGAAG | 1 cut(s) | 615 |
| AcyI | GRCGYC | 1 cut(s) | 32 |
| AfaI | GTAC | 4 cut(s) | 38, 194, 627, 649 |
| AgsI | TTSAA | 1 cut(s) | 614 |
| AjnI | CCWGG | 2 cut(s) | 466, 484 |
| AluBI | AGCT | 2 cut(s) | 43, 341 |
| AluI | AGCT | 2 cut(s) | 43, 341 |
| Alw26I | GTCTC | 3 cut(s) | 8, 88, 404 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 17 |
| AoxI | GGCC | 1 cut(s) | 490 |
| ApeKI | GCWGC | 1 cut(s) | 398 |
| ApoI | RAATTY | 3 cut(s) | 142, 426, 461 |
| AspS9I | GGNCC | 2 cut(s) | 163, 242 |
| AvaII | GGWCC | 2 cut(s) | 163, 242 |
| BanII | GRGCYC | 1 cut(s) | 504 |
| BbvI | GCAGC | 1 cut(s) | 385 |
| BccI | CCATC | 7 cut(s) | 67, 82, 129, 193, 230, 352, 501 |
| BceAI | ACGGC | 1 cut(s) | 19 |
| BciT130I | CCWGG | 2 cut(s) | 468, 486 |
| BcoDI | GTCTC | 3 cut(s) | 8, 88, 404 |
| BfaI | CTAG | 1 cut(s) | 338 |
| BisI | GCNGC | 1 cut(s) | 399 |
| BlsI | GCNGC | 1 cut(s) | 400 |
| Bme1390I | CCNGG | 2 cut(s) | 468, 486 |
| Bme18I | GGWCC | 2 cut(s) | 163, 242 |
| BmgT120I | GGNCC | 2 cut(s) | 163, 242 |
| BmiI | GGNNCC | 1 cut(s) | 164 |
| BmrFI | CCNGG | 2 cut(s) | 468, 486 |
| BmsI | GCATC | 1 cut(s) | 346 |
| BpuEI | CTTGAG | 1 cut(s) | 364 |
| BsaHI | GRCGYC | 1 cut(s) | 32 |
| BsaI | GGTCTC | 1 cut(s) | 88 |
| BsaJI | CCNNGG | 2 cut(s) | 274, 484 |
| BseBI | CCWGG | 2 cut(s) | 468, 486 |
| BseDI | CCNNGG | 2 cut(s) | 274, 484 |
| BseGI | GGATG | 2 cut(s) | 121, 493 |
| BseMII | CTCAG | 2 cut(s) | 144, 590 |
| BseXI | GCAGC | 1 cut(s) | 385 |
| BshFI | GGCC | 1 cut(s) | 492 |
| BslFI | GGGAC | 2 cut(s) | 176, 241 |
| BsmAI | GTCTC | 3 cut(s) | 8, 88, 404 |
| BsmFI | GGGAC | 2 cut(s) | 176, 241 |
| BsmI | GAATGC | 1 cut(s) | 13 |
| BsnI | GGCC | 1 cut(s) | 492 |
| Bso31I | GGTCTC | 1 cut(s) | 88 |
| Bsp1286I | GDGCHC | 1 cut(s) | 504 |
| Bsp1407I | TGTACA | 1 cut(s) | 192 |
| BspANI | GGCC | 1 cut(s) | 492 |
| BspCNI | CTCAG | 2 cut(s) | 145, 589 |
| BspLI | GGNNCC | 1 cut(s) | 164 |
| BspTNI | GGTCTC | 1 cut(s) | 88 |
| BsrGI | TGTACA | 1 cut(s) | 192 |
| BssECI | CCNNGG | 2 cut(s) | 274, 484 |
| BssNI | GRCGYC | 1 cut(s) | 32 |
| BssT1I | CCWWGG | 1 cut(s) | 274 |
| Bst2UI | CCWGG | 2 cut(s) | 468, 486 |
| Bst4CI | ACNGT | 1 cut(s) | 676 |
| BstACI | GRCGYC | 1 cut(s) | 32 |
| BstAUI | TGTACA | 1 cut(s) | 192 |
| BstDEI | CTNAG | 2 cut(s) | 153, 576 |
| BstF5I | GGATG | 2 cut(s) | 121, 493 |
| BstMAI | GTCTC | 3 cut(s) | 8, 88, 404 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 40 |
| BstNI | CCWGG | 2 cut(s) | 468, 486 |
| BstSCI | CCNGG | 2 cut(s) | 466, 484 |
| BstV1I | GCAGC | 1 cut(s) | 385 |
| BsuRI | GGCC | 1 cut(s) | 492 |
| BtsCI | GGATG | 2 cut(s) | 121, 493 |
| CaiI | CAGNNNCTG | 1 cut(s) | 17 |
| Cfr13I | GGNCC | 2 cut(s) | 163, 242 |
| CseI | GACGC | 1 cut(s) | 40 |
| Csp6I | GTAC | 4 cut(s) | 37, 193, 626, 648 |
| CviAII | CATG | 3 cut(s) | 215, 233, 260 |
| CviJI | RGCY | 4 cut(s) | 43, 341, 492, 502 |
| CviKI_1 | RGCY | 4 cut(s) | 43, 341, 492, 502 |
| CviQI | GTAC | 4 cut(s) | 37, 193, 626, 648 |
| DdeI | CTNAG | 2 cut(s) | 153, 576 |
| Eco130I | CCWWGG | 1 cut(s) | 274 |
| Eco24I | GRGCYC | 1 cut(s) | 504 |
| Eco31I | GGTCTC | 1 cut(s) | 88 |
| Eco32I | GATATC | 1 cut(s) | 130 |
| Eco47I | GGWCC | 2 cut(s) | 163, 242 |
| Eco57I | CTGAAG | 1 cut(s) | 615 |
| EcoO109I | RGGNCCY | 1 cut(s) | 242 |
| EcoRI | GAATTC | 1 cut(s) | 142 |
| EcoRII | CCWGG | 2 cut(s) | 466, 484 |
| EcoRV | GATATC | 1 cut(s) | 130 |
| EcoT14I | CCWWGG | 1 cut(s) | 274 |
| EcoT22I | ATGCAT | 1 cut(s) | 687 |
| EcoT38I | GRGCYC | 1 cut(s) | 504 |
| ErhI | CCWWGG | 1 cut(s) | 274 |
| FaeI | CATG | 3 cut(s) | 218, 236, 263 |
| FaqI | GGGAC | 2 cut(s) | 176, 241 |
| FatI | CATG | 3 cut(s) | 214, 232, 259 |
| Fnu4HI | GCNGC | 1 cut(s) | 399 |
| FokI | GGATG | 2 cut(s) | 108, 480 |
| FriOI | GRGCYC | 1 cut(s) | 504 |
| Fsp4HI | GCNGC | 1 cut(s) | 399 |
| FspBI | CTAG | 1 cut(s) | 338 |
| GluI | GCNGC | 1 cut(s) | 399 |
| HaeIII | GGCC | 1 cut(s) | 492 |
| HgaI | GACGC | 1 cut(s) | 40 |
| Hin1I | GRCGYC | 1 cut(s) | 32 |
| Hin1II | CATG | 3 cut(s) | 218, 236, 263 |
| HindIII | AAGCTT | 1 cut(s) | 41 |
| HinfI | GANTC | 4 cut(s) | 114, 254, 548, 635 |
| Hpy188I | TCNGA | 6 cut(s) | 154, 177, 282, 349, 418, 634 |
| Hpy188III | TCNNGA | 4 cut(s) | 125, 497, 578, 602 |
| Hpy99I | CGWCG | 2 cut(s) | 34, 101 |
| HpyAV | CCTTC | 2 cut(s) | 562, 639 |
| HpyCH4III | ACNGT | 1 cut(s) | 676 |
| HpyCH4V | TGCA | 3 cut(s) | 11, 439, 685 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 40 |
| HpyF3I | CTNAG | 2 cut(s) | 153, 576 |
| Hsp92I | GRCGYC | 1 cut(s) | 32 |
| Hsp92II | CATG | 3 cut(s) | 218, 236, 263 |
| LmnI | GCTCC | 1 cut(s) | 346 |
| Lsp1109I | GCAGC | 1 cut(s) | 385 |
| LweI | GCATC | 1 cut(s) | 346 |
| MaeI | CTAG | 1 cut(s) | 338 |
| MaeIII | GTNAC | 1 cut(s) | 446 |
| MboII | GAAGA | 2 cut(s) | 362, 626 |
| MhlI | GDGCHC | 1 cut(s) | 504 |
| MluCI | AATT | 4 cut(s) | 142, 426, 461, 618 |
| MlyI | GAGTC | 2 cut(s) | 263, 542 |
| MnlI | CCTC | 5 cut(s) | 233, 278, 388, 482, 598 |
| Mph1103I | ATGCAT | 1 cut(s) | 687 |
| MseI | TTAA | 3 cut(s) | 314, 542, 705 |
| MspR9I | CCNGG | 2 cut(s) | 468, 486 |
| Mva1269I | GAATGC | 1 cut(s) | 13 |
| MvaI | CCWGG | 2 cut(s) | 468, 486 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 40 |
| NlaIII | CATG | 3 cut(s) | 218, 236, 263 |
| NlaIV | GGNNCC | 1 cut(s) | 164 |
| NmuCI | GTSAC | 1 cut(s) | 446 |
| NsiI | ATGCAT | 1 cut(s) | 687 |
| PctI | GAATGC | 1 cut(s) | 13 |
| PfeI | GAWTC | 2 cut(s) | 114, 635 |
| PfoI | TCCNGGA | 1 cut(s) | 466 |
| PkrI | GCNGC | 1 cut(s) | 400 |
| PleI | GAGTC | 2 cut(s) | 262, 542 |
| PpsI | GAGTC | 2 cut(s) | 262, 542 |
| PpuMI | RGGWCCY | 1 cut(s) | 242 |
| Psp5II | RGGWCCY | 1 cut(s) | 242 |
| Psp6I | CCWGG | 2 cut(s) | 466, 484 |
| PspGI | CCWGG | 2 cut(s) | 466, 484 |
| PspN4I | GGNNCC | 1 cut(s) | 164 |
| PspPI | GGNCC | 2 cut(s) | 163, 242 |
| PspPPI | RGGWCCY | 1 cut(s) | 242 |
| PstNI | CAGNNNCTG | 1 cut(s) | 17 |
| RsaI | GTAC | 4 cut(s) | 38, 194, 627, 649 |
| RsaNI | GTAC | 4 cut(s) | 37, 193, 626, 648 |
| SaqAI | TTAA | 3 cut(s) | 314, 542, 705 |
| SatI | GCNGC | 1 cut(s) | 399 |
| Sau96I | GGNCC | 2 cut(s) | 163, 242 |
| SchI | GAGTC | 2 cut(s) | 263, 542 |
| ScrFI | CCNGG | 2 cut(s) | 468, 486 |
| SduI | GDGCHC | 1 cut(s) | 504 |
| SfaNI | GCATC | 1 cut(s) | 346 |
| SinI | GGWCC | 2 cut(s) | 163, 242 |
| SmlI | CTYRAG | 1 cut(s) | 379 |
| SmoI | CTYRAG | 1 cut(s) | 379 |
| Sse9I | AATT | 4 cut(s) | 142, 426, 461, 618 |
| SspMI | CTAG | 1 cut(s) | 338 |
| StyD4I | CCNGG | 2 cut(s) | 466, 484 |
| StyI | CCWWGG | 1 cut(s) | 274 |
| TaaI | ACNGT | 1 cut(s) | 676 |
| TaqI | TCGA | 2 cut(s) | 96, 588 |
| TaqII | GACCGA | 1 cut(s) | 126 |
| TasI | AATT | 4 cut(s) | 142, 426, 461, 618 |
| TatI | WGTACW | 2 cut(s) | 192, 647 |
| TfiI | GAWTC | 2 cut(s) | 114, 635 |
| Tru1I | TTAA | 3 cut(s) | 314, 542, 705 |
| Tru9I | TTAA | 3 cut(s) | 314, 542, 705 |
| TseFI | GTSAC | 1 cut(s) | 446 |
| TseI | GCWGC | 1 cut(s) | 398 |
| Tsp45I | GTSAC | 1 cut(s) | 446 |
| TspGWI | ACGGA | 3 cut(s) | 38, 213, 375 |
| VpaK11BI | GGWCC | 2 cut(s) | 163, 242 |
| XapI | RAATTY | 3 cut(s) | 142, 426, 461 |
| XspI | CTAG | 1 cut(s) | 338 |
| Zsp2I | ATGCAT | 1 cut(s) | 687 |