Helicase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0361431 RchiOBHm_Chr3g0487041 RchiOBHm_Chr3g0495601 RchiOBHm_Chr5g0009731 RchiOBHm_Chr5g0033411 RchiOBHm_Chr5g0047401 RchiOBHm_Chr5g0060131 RchiOBHm_Chr7g0197071 RchiOBHm_Chr7g0197081 RchiOBHm_Chr7g0219601 |
| rosa_multiflora | Rmu_sc0000566.1_g000030 |
| rosa_roxburghii | Rroxscaffold_7G00202750 |
| rosa_samantha | Rh5CG485800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 265 |
| AccIII | TCCGGA | 1 cut(s) | 286 |
| AfaI | GTAC | 2 cut(s) | 132, 206 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 126 |
| AflIII | ACRYGT | 1 cut(s) | 201 |
| AluBI | AGCT | 2 cut(s) | 115, 182 |
| AluI | AGCT | 2 cut(s) | 115, 182 |
| Alw26I | GTCTC | 1 cut(s) | 141 |
| Aor13HI | TCCGGA | 1 cut(s) | 286 |
| BaeGI | GKGCMC | 1 cut(s) | 270 |
| BanI | GGYRCC | 1 cut(s) | 265 |
| BciVI | GTATCC | 1 cut(s) | 92 |
| BcoDI | GTCTC | 1 cut(s) | 141 |
| BfuI | GTATCC | 1 cut(s) | 92 |
| BmiI | GGNNCC | 1 cut(s) | 267 |
| BpmI | CTGGAG | 1 cut(s) | 123 |
| BsaWI | WCCGGW | 1 cut(s) | 286 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 126 |
| BseAI | TCCGGA | 1 cut(s) | 286 |
| BseGI | GGATG | 1 cut(s) | 283 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 126 |
| BseMII | CTCAG | 1 cut(s) | 222 |
| BseRI | GAGGAG | 1 cut(s) | 203 |
| BseSI | GKGCMC | 1 cut(s) | 270 |
| BsgI | GTGCAG | 1 cut(s) | 13 |
| BshNI | GGYRCC | 1 cut(s) | 265 |
| BsiSI | CCGG | 1 cut(s) | 287 |
| BslFI | GGGAC | 1 cut(s) | 241 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 126 |
| BsmAI | GTCTC | 1 cut(s) | 141 |
| BsmFI | GGGAC | 1 cut(s) | 241 |
| Bsp1286I | GDGCHC | 1 cut(s) | 270 |
| Bsp13I | TCCGGA | 1 cut(s) | 286 |
| Bsp143I | GATC | 1 cut(s) | 75 |
| BspCNI | CTCAG | 1 cut(s) | 221 |
| BspEI | TCCGGA | 1 cut(s) | 286 |
| BspHI | TCATGA | 2 cut(s) | 78, 302 |
| BspLI | GGNNCC | 1 cut(s) | 267 |
| BspT107I | GGYRCC | 1 cut(s) | 265 |
| BssMI | GATC | 1 cut(s) | 75 |
| Bst4CI | ACNGT | 1 cut(s) | 135 |
| Bst6I | CTCTTC | 1 cut(s) | 285 |
| BstDEI | CTNAG | 1 cut(s) | 208 |
| BstF5I | GGATG | 1 cut(s) | 283 |
| BstKTI | GATC | 1 cut(s) | 78 |
| BstMAI | GTCTC | 1 cut(s) | 141 |
| BstMBI | GATC | 1 cut(s) | 75 |
| BstNSI | RCATGY | 2 cut(s) | 159, 205 |
| BstSLI | GKGCMC | 1 cut(s) | 270 |
| BsuI | GTATCC | 1 cut(s) | 92 |
| BtsCI | GGATG | 1 cut(s) | 283 |
| CciI | TCATGA | 2 cut(s) | 78, 302 |
| Csp6I | GTAC | 2 cut(s) | 131, 205 |
| CviAII | CATG | 6 cut(s) | 35, 79, 144, 156, 202, 303 |
| CviJI | RGCY | 2 cut(s) | 115, 182 |
| CviKI_1 | RGCY | 2 cut(s) | 115, 182 |
| CviQI | GTAC | 2 cut(s) | 131, 205 |
| DdeI | CTNAG | 1 cut(s) | 208 |
| DpnI | GATC | 1 cut(s) | 77 |
| DpnII | GATC | 1 cut(s) | 75 |
| Eam1104I | CTCTTC | 1 cut(s) | 285 |
| EarI | CTCTTC | 1 cut(s) | 285 |
| FaeI | CATG | 6 cut(s) | 38, 82, 147, 159, 205, 306 |
| FaqI | GGGAC | 1 cut(s) | 241 |
| FatI | CATG | 6 cut(s) | 34, 78, 143, 155, 201, 302 |
| FokI | GGATG | 1 cut(s) | 270 |
| GsuI | CTGGAG | 1 cut(s) | 123 |
| HapII | CCGG | 1 cut(s) | 287 |
| Hin1II | CATG | 6 cut(s) | 38, 82, 147, 159, 205, 306 |
| HpaII | CCGG | 1 cut(s) | 287 |
| Hpy188I | TCNGA | 1 cut(s) | 211 |
| Hpy188III | TCNNGA | 3 cut(s) | 79, 287, 303 |
| Hpy99I | CGWCG | 1 cut(s) | 129 |
| HpyAV | CCTTC | 2 cut(s) | 50, 76 |
| HpyCH4III | ACNGT | 1 cut(s) | 135 |
| HpyCH4V | TGCA | 3 cut(s) | 30, 155, 253 |
| HpyF3I | CTNAG | 1 cut(s) | 208 |
| Hsp92II | CATG | 6 cut(s) | 38, 82, 147, 159, 205, 306 |
| Kpn2I | TCCGGA | 1 cut(s) | 286 |
| Kzo9I | GATC | 1 cut(s) | 75 |
| LpnPI | CCDG | 8 cut(s) | 81, 105, 116, 133, 153, 192, 248, 300 |
| MalI | GATC | 1 cut(s) | 77 |
| MboI | GATC | 1 cut(s) | 75 |
| MboII | GAAGA | 2 cut(s) | 85, 302 |
| MhlI | GDGCHC | 1 cut(s) | 270 |
| MluCI | AATT | 1 cut(s) | 274 |
| MnlI | CCTC | 4 cut(s) | 8, 181, 235, 270 |
| MroI | TCCGGA | 1 cut(s) | 286 |
| MslI | CAYNNNNRTG | 1 cut(s) | 160 |
| MspI | CCGG | 1 cut(s) | 287 |
| NdeII | GATC | 1 cut(s) | 75 |
| NlaIII | CATG | 6 cut(s) | 38, 82, 147, 159, 205, 306 |
| NlaIV | GGNNCC | 1 cut(s) | 267 |
| NspI | RCATGY | 2 cut(s) | 159, 205 |
| PagI | TCATGA | 2 cut(s) | 78, 302 |
| PciI | ACATGT | 1 cut(s) | 201 |
| PscI | ACATGT | 1 cut(s) | 201 |
| PspN4I | GGNNCC | 1 cut(s) | 267 |
| RsaI | GTAC | 2 cut(s) | 132, 206 |
| RsaNI | GTAC | 2 cut(s) | 131, 205 |
| RseI | CAYNNNNRTG | 1 cut(s) | 160 |
| Sau3AI | GATC | 1 cut(s) | 75 |
| SduI | GDGCHC | 1 cut(s) | 270 |
| SetI | ASST | 3 cut(s) | 105, 117, 184 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 160 |
| Sse9I | AATT | 1 cut(s) | 274 |
| TaaI | ACNGT | 1 cut(s) | 135 |
| TaqI | TCGA | 1 cut(s) | 160 |
| TasI | AATT | 1 cut(s) | 274 |
| TatI | WGTACW | 1 cut(s) | 204 |
| TspDTI | ATGAA | 3 cut(s) | 69, 95, 125 |
| XceI | RCATGY | 2 cut(s) | 159, 205 |