TATA-binding protein-associated factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G54280 AT3G54280 |
| fragaria_vesca | FvH4_3g46101 FvH4_3g46101 FvH4_3g46101 FvH4_3g46101 FvH4_3g46101 FvH4_3g46101 |
| malus_domestica | MD03G1000900.v1.1 MD11G1000100.v1.1 |
| prunus_persica | Prupe.6G000100_v2.0.a1 |
| pyrus_communis | pycom03g00100 pycom11g00010 |
| rosa_chinensis | RchiOBHm_Chr5g0084181 |
| rosa_laevigata | RLG00000037090 |
| rosa_multiflora | Rmu_sc0005537.1_g000013 |
| rosa_roxburghii | Rroxscaffold_1G00000450 |
| rosa_rugosa | Rorug05G0489600 Rorug05G0489700 |
| rosa_samantha | Rh5AG542400 Rh5BG568400 Rh5CG590000 Rh5DG576400 |
| rosa_wichuraiana | Rw5G050450 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 3752 |
| AatII | GACGTC | 1 cut(s) | 493 |
| Acc16I | TGCGCA | 1 cut(s) | 4545 |
| Acc36I | ACCTGC | 3 cut(s) | 1216, 2752, 5002 |
| AccB1I | GGYRCC | 2 cut(s) | 2095, 5456 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 732, 4229 |
| AccI | GTMKAC | 2 cut(s) | 1645, 5436 |
| AccII | CGCG | 1 cut(s) | 22 |
| AccIII | TCCGGA | 1 cut(s) | 5983 |
| AclI | AACGTT | 2 cut(s) | 4390, 5599 |
| AcoI | YGGCCR | 2 cut(s) | 1698, 3948 |
| AcsI | RAATTY | 9 cut(s) | 824, 833, 969, 1099, 1457, 1659, 2269, 2295, 3036 |
| AcuI | CTGAAG | 5 cut(s) | 3231, 4995, 5231, 5472, 6108 |
| AcyI | GRCGYC | 2 cut(s) | 490, 5343 |
| AflIII | ACRYGT | 4 cut(s) | 915, 4747, 5143, 5230 |
| AjiI | CACGTC | 1 cut(s) | 351 |
| AjnI | CCWGG | 8 cut(s) | 1935, 2004, 2238, 2839, 3234, 3807, 4203, 5338 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 3110, 3142 |
| AleI | CACNNNNGTG | 1 cut(s) | 2104 |
| Alw21I | GWGCWC | 4 cut(s) | 769, 1564, 4987, 5721 |
| Alw44I | GTGCAC | 1 cut(s) | 1560 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 174, 1796, 4075, 5091 |
| Ama87I | CYCGRG | 3 cut(s) | 408, 4883, 5217 |
| Aor13HI | TCCGGA | 1 cut(s) | 5983 |
| ApaI | GGGCCC | 1 cut(s) | 5105 |
| ApaLI | GTGCAC | 1 cut(s) | 1560 |
| ApoI | RAATTY | 9 cut(s) | 824, 833, 969, 1099, 1457, 1659, 2269, 2295, 3036 |
| AseI | ATTAAT | 3 cut(s) | 588, 3072, 5880 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 1461, 1716, 2059, 3336 |
| AspLEI | GCGC | 3 cut(s) | 397, 4546, 6023 |
| AspS9I | GGNCC | 7 cut(s) | 4, 1768, 2553, 4551, 4860, 5101, 5102 |
| AsuC2I | CCSGG | 2 cut(s) | 4884, 4885 |
| AsuHPI | GGTGA | 6 cut(s) | 1147, 1876, 5182, 5205, 5303, 5551 |
| AsuII | TTCGAA | 1 cut(s) | 2942 |
| AvaI | CYCGRG | 3 cut(s) | 408, 4883, 5217 |
| AvaII | GGWCC | 3 cut(s) | 1768, 2553, 4860 |
| AxyI | CCTNAGG | 2 cut(s) | 120, 4343 |
| BaeGI | GKGCMC | 3 cut(s) | 1564, 5105, 5764 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 5955, 5988 |
| BalI | TGGCCA | 2 cut(s) | 1700, 3950 |
| BamHI | GGATCC | 3 cut(s) | 3448, 3781, 4948 |
| BanI | GGYRCC | 2 cut(s) | 2095, 5456 |
| BanII | GRGCYC | 2 cut(s) | 794, 5105 |
| BarI | GAAGNNNNNNTAC | 6 cut(s) | 1237, 1269, 2685, 2717, 4182, 4214 |
| BauI | CACGAG | 1 cut(s) | 4209 |
| BbsI | GAAGAC | 5 cut(s) | 312, 558, 2373, 3582, 4625 |
| Bbv12I | GWGCWC | 4 cut(s) | 769, 1564, 4987, 5721 |
| BbvCI | CCTCAGC | 2 cut(s) | 3354, 3786 |
| BceAI | ACGGC | 1 cut(s) | 5444 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 333, 367 |
| BciT130I | CCWGG | 8 cut(s) | 1937, 2006, 2240, 2841, 3236, 3809, 4205, 5340 |
| BciVI | GTATCC | 4 cut(s) | 1323, 2177, 5983, 5991 |
| BclI | TGATCA | 5 cut(s) | 838, 1528, 2965, 3502, 4144 |
| BcnI | CCSGG | 2 cut(s) | 4884, 4885 |
| BfmI | CTRYAG | 6 cut(s) | 1797, 3471, 3738, 3822, 5187, 5862 |
| BfoI | RGCGCY | 1 cut(s) | 6024 |
| BfuAI | ACCTGC | 3 cut(s) | 1216, 2752, 5002 |
| BfuI | GTATCC | 4 cut(s) | 1323, 2177, 5983, 5991 |
| BlpI | GCTNAGC | 1 cut(s) | 4960 |
| BmcAI | AGTACT | 2 cut(s) | 2215, 5252 |
| Bme18I | GGWCC | 3 cut(s) | 1768, 2553, 4860 |
| BmeT110I | CYCGRG | 3 cut(s) | 408, 4883, 5217 |
| BmgBI | CACGTC | 1 cut(s) | 351 |
| BmgT120I | GGNCC | 7 cut(s) | 4, 1768, 2553, 4551, 4860, 5101, 5102 |
| BmrI | ACTGGG | 4 cut(s) | 184, 2036, 4085, 4558 |
| BmuI | ACTGGG | 4 cut(s) | 184, 2036, 4085, 4558 |
| BpiI | GAAGAC | 5 cut(s) | 312, 558, 2373, 3582, 4625 |
| BplI | GAGNNNNNCTC | 8 cut(s) | 451, 483, 1346, 1378, 3359, 3391, 3769, 3801 |
| BpmI | CTGGAG | 5 cut(s) | 2027, 2595, 2850, 4234, 4612 |
| Bpu10I | CCTNAGC | 2 cut(s) | 3354, 3786 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 4960 |
| Bpu14I | TTCGAA | 1 cut(s) | 2942 |
| BpuEI | CTTGAG | 2 cut(s) | 1036, 3073 |
| BpuMI | CCSGG | 2 cut(s) | 4884, 4885 |
| BsaAI | YACGTR | 2 cut(s) | 611, 1550 |
| BsaHI | GRCGYC | 2 cut(s) | 490, 5343 |
| BsaI | GGTCTC | 1 cut(s) | 1192 |
| BsaWI | WCCGGW | 1 cut(s) | 5983 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1506, 1536 |
| Bse21I | CCTNAGG | 2 cut(s) | 120, 4343 |
| Bse3DI | GCAATG | 4 cut(s) | 339, 1850, 5333, 5757 |
| BseAI | TCCGGA | 1 cut(s) | 5983 |
| BseBI | CCWGG | 8 cut(s) | 1937, 2006, 2240, 2841, 3236, 3809, 4205, 5340 |
| BseMI | GCAATG | 4 cut(s) | 339, 1850, 5333, 5757 |
| BseRI | GAGGAG | 1 cut(s) | 4360 |
| BseSI | GKGCMC | 3 cut(s) | 1564, 5105, 5764 |
| BseYI | CCCAGC | 3 cut(s) | 6, 284, 5674 |
| BsgI | GTGCAG | 5 cut(s) | 2634, 3200, 3258, 4062, 4278 |
| Bsh1236I | CGCG | 1 cut(s) | 22 |
| BshNI | GGYRCC | 2 cut(s) | 2095, 5456 |
| BsiHKAI | GWGCWC | 4 cut(s) | 769, 1564, 4987, 5721 |
| BsiHKCI | CYCGRG | 3 cut(s) | 408, 4883, 5217 |
| BsiSI | CCGG | 4 cut(s) | 996, 1705, 4884, 5984 |
| BsiWI | CGTACG | 1 cut(s) | 1546 |
| BslFI | GGGAC | 4 cut(s) | 191, 3712, 4086, 4846 |
| BsmBI | CGTCTC | 2 cut(s) | 29, 5350 |
| BsmFI | GGGAC | 4 cut(s) | 191, 3712, 4086, 4846 |
| BsmI | GAATGC | 6 cut(s) | 261, 1435, 1855, 3898, 4765, 5896 |
| Bso31I | GGTCTC | 1 cut(s) | 1192 |
| BsoBI | CYCGRG | 3 cut(s) | 408, 4883, 5217 |
| Bsp119I | TTCGAA | 1 cut(s) | 2942 |
| Bsp120I | GGGCCC | 1 cut(s) | 5101 |
| Bsp1286I | GDGCHC | 7 cut(s) | 769, 794, 1564, 4987, 5105, 5721, 5764 |
| Bsp13I | TCCGGA | 1 cut(s) | 5983 |
| Bsp1407I | TGTACA | 1 cut(s) | 5107 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 4960 |
| Bsp19I | CCATGG | 3 cut(s) | 574, 943, 3945 |
| BspEI | TCCGGA | 1 cut(s) | 5983 |
| BspFNI | CGCG | 1 cut(s) | 22 |
| BspHI | TCATGA | 1 cut(s) | 1609 |
| BspMAI | CTGCAG | 4 cut(s) | 1801, 3475, 3742, 5191 |
| BspMI | ACCTGC | 3 cut(s) | 1216, 2752, 5002 |
| BspQI | GCTCTTC | 1 cut(s) | 6054 |
| BspT104I | TTCGAA | 1 cut(s) | 2942 |
| BspT107I | GGYRCC | 2 cut(s) | 2095, 5456 |
| BspTNI | GGTCTC | 1 cut(s) | 1192 |
| BsrDI | GCAATG | 4 cut(s) | 339, 1850, 5333, 5757 |
| BsrGI | TGTACA | 1 cut(s) | 5107 |
| BssNI | GRCGYC | 2 cut(s) | 490, 5343 |
| BssSI | CACGAG | 1 cut(s) | 4209 |
| BssT1I | CCWWGG | 6 cut(s) | 574, 671, 726, 943, 3945, 4965 |
| Bst2BI | CACGAG | 1 cut(s) | 4209 |
| Bst2UI | CCWGG | 8 cut(s) | 1937, 2006, 2240, 2841, 3236, 3809, 4205, 5340 |
| Bst6I | CTCTTC | 8 cut(s) | 1070, 1953, 2460, 4125, 5412, 5546, 5820, 6054 |
| BstACI | GRCGYC | 2 cut(s) | 490, 5343 |
| BstAPI | GCANNNNNTGC | 5 cut(s) | 1714, 1796, 4265, 5017, 5891 |
| BstAUI | TGTACA | 1 cut(s) | 5107 |
| BstBAI | YACGTR | 2 cut(s) | 611, 1550 |
| BstBI | TTCGAA | 1 cut(s) | 2942 |
| BstDSI | CCRYGG | 4 cut(s) | 574, 943, 2099, 3945 |
| BstFNI | CGCG | 1 cut(s) | 22 |
| BstH2I | RGCGCY | 1 cut(s) | 6024 |
| BstHHI | GCGC | 3 cut(s) | 397, 4546, 6023 |
| BstNI | CCWGG | 8 cut(s) | 1937, 2006, 2240, 2841, 3236, 3809, 4205, 5340 |
| BstNSI | RCATGY | 6 cut(s) | 919, 1594, 3444, 4051, 4751, 5147 |
| BstSFI | CTRYAG | 6 cut(s) | 1797, 3471, 3738, 3822, 5187, 5862 |
| BstSLI | GKGCMC | 3 cut(s) | 1564, 5105, 5764 |
| BstUI | CGCG | 1 cut(s) | 22 |
| BstV2I | GAAGAC | 5 cut(s) | 312, 558, 2373, 3582, 4625 |
| BstX2I | RGATCY | 5 cut(s) | 1375, 3448, 3781, 4948, 5629 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 581, 2106, 4607 |
| BstYI | RGATCY | 5 cut(s) | 1375, 3448, 3781, 4948, 5629 |
| Bsu36I | CCTNAGG | 2 cut(s) | 120, 4343 |
| BsuI | GTATCC | 4 cut(s) | 1323, 2177, 5983, 5991 |
| BtgI | CCRYGG | 4 cut(s) | 574, 943, 2099, 3945 |
| BtgZI | GCGATG | 3 cut(s) | 14, 4431, 4466 |
| BtrI | CACGTC | 1 cut(s) | 351 |
| BtsI | GCAGTG | 2 cut(s) | 1646, 1927 |
| BtsIMutI | CAGTG | 9 cut(s) | 51, 1031, 1646, 1927, 2342, 2931, 4546, 4931, 6084 |
| BveI | ACCTGC | 3 cut(s) | 1216, 2752, 5002 |
| CaiI | CAGNNNCTG | 4 cut(s) | 174, 1796, 4075, 5091 |
| CciI | TCATGA | 1 cut(s) | 1609 |
| CfoI | GCGC | 3 cut(s) | 397, 4546, 6023 |
| Cfr13I | GGNCC | 7 cut(s) | 4, 1768, 2553, 4551, 4860, 5101, 5102 |
| Cfr9I | CCCGGG | 1 cut(s) | 4883 |
| CseI | GACGC | 3 cut(s) | 11, 5332, 5447 |
| DraI | TTTAAA | 4 cut(s) | 2476, 3195, 3849, 4386 |
| EaeI | YGGCCR | 2 cut(s) | 1698, 3948 |
| Eam1104I | CTCTTC | 8 cut(s) | 1070, 1953, 2460, 4125, 5412, 5546, 5820, 6054 |
| EarI | CTCTTC | 8 cut(s) | 1070, 1953, 2460, 4125, 5412, 5546, 5820, 6054 |
| Eco130I | CCWWGG | 6 cut(s) | 574, 671, 726, 943, 3945, 4965 |
| Eco147I | AGGCCT | 1 cut(s) | 3397 |
| Eco24I | GRGCYC | 2 cut(s) | 794, 5105 |
| Eco31I | GGTCTC | 1 cut(s) | 1192 |
| Eco32I | GATATC | 3 cut(s) | 427, 1216, 5160 |
| Eco47I | GGWCC | 3 cut(s) | 1768, 2553, 4860 |
| Eco57I | CTGAAG | 5 cut(s) | 3231, 4995, 5231, 5472, 6108 |
| Eco81I | CCTNAGG | 2 cut(s) | 120, 4343 |
| Eco88I | CYCGRG | 3 cut(s) | 408, 4883, 5217 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1768, 5102 |
| EcoRII | CCWGG | 8 cut(s) | 1935, 2004, 2238, 2839, 3234, 3807, 4203, 5338 |
| EcoRV | GATATC | 3 cut(s) | 427, 1216, 5160 |
| EcoT14I | CCWWGG | 6 cut(s) | 574, 671, 726, 943, 3945, 4965 |
| EcoT22I | ATGCAT | 3 cut(s) | 1596, 3446, 3938 |
| EcoT38I | GRGCYC | 2 cut(s) | 794, 5105 |
| ErhI | CCWWGG | 6 cut(s) | 574, 671, 726, 943, 3945, 4965 |
| Esp3I | CGTCTC | 2 cut(s) | 29, 5350 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 3498, 3530, 6030, 6062 |
| FaqI | GGGAC | 4 cut(s) | 191, 3712, 4086, 4846 |
| FauI | CCCGC | 4 cut(s) | 2727, 5192, 5730, 6044 |
| FauNDI | CATATG | 5 cut(s) | 2410, 3558, 4096, 4675, 5547 |
| FbaI | TGATCA | 5 cut(s) | 838, 1528, 2965, 3502, 4144 |
| FblI | GTMKAC | 2 cut(s) | 1645, 5436 |
| FriOI | GRGCYC | 2 cut(s) | 794, 5105 |
| FspI | TGCGCA | 1 cut(s) | 4545 |
| GlaI | GCGC | 3 cut(s) | 396, 4545, 6022 |
| GsaI | CCCAGC | 3 cut(s) | 10, 288, 5678 |
| GsuI | CTGGAG | 5 cut(s) | 2027, 2595, 2850, 4234, 4612 |
| HaeII | RGCGCY | 1 cut(s) | 6024 |
| HapII | CCGG | 4 cut(s) | 996, 1705, 4884, 5984 |
| HgaI | GACGC | 3 cut(s) | 11, 5332, 5447 |
| HhaI | GCGC | 3 cut(s) | 397, 4546, 6023 |
| Hin1I | GRCGYC | 2 cut(s) | 490, 5343 |
| Hin6I | GCGC | 3 cut(s) | 395, 4544, 6021 |
| HinP1I | GCGC | 3 cut(s) | 395, 4544, 6021 |
| HincII | GTYRAC | 2 cut(s) | 1274, 5437 |
| HindII | GTYRAC | 2 cut(s) | 1274, 5437 |
| HindIII | AAGCTT | 9 cut(s) | 361, 2504, 3049, 3671, 4397, 4712, 5297, 5616, 6119 |
| HpaII | CCGG | 4 cut(s) | 996, 1705, 4884, 5984 |
| HphI | GGTGA | 6 cut(s) | 1147, 1876, 5182, 5205, 5303, 5551 |
| Hpy166II | GTNNAC | 8 cut(s) | 1169, 1274, 1562, 1646, 3027, 3061, 5141, 5437 |
| Hpy8I | GTNNAC | 8 cut(s) | 1169, 1274, 1562, 1646, 3027, 3061, 5141, 5437 |
| Hpy99I | CGWCG | 6 cut(s) | 355, 492, 495, 4472, 5037, 5441 |
| Hsp92I | GRCGYC | 2 cut(s) | 490, 5343 |
| HspAI | GCGC | 3 cut(s) | 395, 4544, 6021 |
| Kpn2I | TCCGGA | 1 cut(s) | 5983 |
| Ksp22I | TGATCA | 5 cut(s) | 838, 1528, 2965, 3502, 4144 |
| LguI | GCTCTTC | 1 cut(s) | 6054 |
| LmnI | GCTCC | 9 cut(s) | 1300, 1546, 2331, 3832, 3977, 4105, 4631, 4982, 5716 |
| MfeI | CAATTG | 6 cut(s) | 204, 213, 1113, 4793, 5637, 5921 |
| MflI | RGATCY | 5 cut(s) | 1375, 3448, 3781, 4948, 5629 |
| MhlI | GDGCHC | 7 cut(s) | 769, 794, 1564, 4987, 5105, 5721, 5764 |
| MlsI | TGGCCA | 2 cut(s) | 1700, 3950 |
| MluNI | TGGCCA | 2 cut(s) | 1700, 3950 |
| MlyI | GAGTC | 8 cut(s) | 2476, 2525, 3005, 3164, 3734, 5192, 5300, 5490 |
| MmeI | TCCRAC | 3 cut(s) | 1622, 2853, 4491 |
| Mox20I | TGGCCA | 2 cut(s) | 1700, 3950 |
| Mph1103I | ATGCAT | 3 cut(s) | 1596, 3446, 3938 |
| MroI | TCCGGA | 1 cut(s) | 5983 |
| MroXI | GAANNNNTTC | 4 cut(s) | 1461, 1716, 2059, 3336 |
| MscI | TGGCCA | 2 cut(s) | 1700, 3950 |
| Msp20I | TGGCCA | 2 cut(s) | 1700, 3950 |
| MspA1I | CMGCKG | 5 cut(s) | 83, 2657, 2722, 2758, 3353 |
| MspI | CCGG | 4 cut(s) | 996, 1705, 4884, 5984 |
| MunI | CAATTG | 6 cut(s) | 204, 213, 1113, 4793, 5637, 5921 |
| Mva1269I | GAATGC | 6 cut(s) | 261, 1435, 1855, 3898, 4765, 5896 |
| MvaI | CCWGG | 8 cut(s) | 1937, 2006, 2240, 2841, 3236, 3809, 4205, 5340 |
| MvnI | CGCG | 1 cut(s) | 22 |
| NciI | CCSGG | 2 cut(s) | 4884, 4885 |
| NcoI | CCATGG | 3 cut(s) | 574, 943, 3945 |
| NdeI | CATATG | 5 cut(s) | 2410, 3558, 4096, 4675, 5547 |
| NmeAIII | GCCGAG | 1 cut(s) | 67 |
| NmuCI | GTSAC | 7 cut(s) | 4015, 4136, 4165, 4336, 5093, 5226, 5557 |
| NsbI | TGCGCA | 1 cut(s) | 4545 |
| NsiI | ATGCAT | 3 cut(s) | 1596, 3446, 3938 |
| NspI | RCATGY | 6 cut(s) | 919, 1594, 3444, 4051, 4751, 5147 |
| NspV | TTCGAA | 1 cut(s) | 2942 |
| OliI | CACNNNNGTG | 1 cut(s) | 2104 |
| PacI | TTAATTAA | 1 cut(s) | 3420 |
| PaeI | GCATGC | 1 cut(s) | 4051 |
| PaeR7I | CTCGAG | 1 cut(s) | 408 |
| PagI | TCATGA | 1 cut(s) | 1609 |
| PceI | AGGCCT | 1 cut(s) | 3397 |
| PciI | ACATGT | 3 cut(s) | 915, 4747, 5143 |
| PciSI | GCTCTTC | 1 cut(s) | 6054 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2216 |
| PctI | GAATGC | 6 cut(s) | 261, 1435, 1855, 3898, 4765, 5896 |
| PdmI | GAANNNNTTC | 4 cut(s) | 1461, 1716, 2059, 3336 |
| Pfl23II | CGTACG | 1 cut(s) | 1546 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 732, 4229 |
| PleI | GAGTC | 8 cut(s) | 2475, 2524, 3004, 3163, 3733, 5191, 5300, 5489 |
| PpsI | GAGTC | 8 cut(s) | 2475, 2524, 3004, 3163, 3733, 5191, 5300, 5489 |
| Ppu21I | YACGTR | 2 cut(s) | 611, 1550 |
| PpuMI | RGGWCCY | 1 cut(s) | 1768 |
| PscI | ACATGT | 3 cut(s) | 915, 4747, 5143 |
| PshBI | ATTAAT | 3 cut(s) | 588, 3072, 5880 |
| PsiI | TTATAA | 1 cut(s) | 3752 |
| Psp1406I | AACGTT | 2 cut(s) | 4390, 5599 |
| Psp5II | RGGWCCY | 1 cut(s) | 1768 |
| Psp6I | CCWGG | 8 cut(s) | 1935, 2004, 2238, 2839, 3234, 3807, 4203, 5338 |
| PspFI | CCCAGC | 3 cut(s) | 6, 284, 5674 |
| PspGI | CCWGG | 8 cut(s) | 1935, 2004, 2238, 2839, 3234, 3807, 4203, 5338 |
| PspLI | CGTACG | 1 cut(s) | 1546 |
| PspOMI | GGGCCC | 1 cut(s) | 5101 |
| PspPI | GGNCC | 7 cut(s) | 4, 1768, 2553, 4551, 4860, 5101, 5102 |
| PspPPI | RGGWCCY | 1 cut(s) | 1768 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 4074, 4106 |
| PstI | CTGCAG | 4 cut(s) | 1801, 3475, 3742, 5191 |
| PstNI | CAGNNNCTG | 4 cut(s) | 174, 1796, 4075, 5091 |
| PsuI | RGATCY | 5 cut(s) | 1375, 3448, 3781, 4948, 5629 |
| PvuII | CAGCTG | 2 cut(s) | 83, 3353 |
| SalI | GTCGAC | 1 cut(s) | 5435 |
| SapI | GCTCTTC | 1 cut(s) | 6054 |
| Sau96I | GGNCC | 7 cut(s) | 4, 1768, 2553, 4551, 4860, 5101, 5102 |
| ScaI | AGTACT | 2 cut(s) | 2215, 5252 |
| SchI | GAGTC | 8 cut(s) | 2476, 2525, 3005, 3164, 3734, 5192, 5300, 5490 |
| SduI | GDGCHC | 7 cut(s) | 769, 794, 1564, 4987, 5105, 5721, 5764 |
| SfcI | CTRYAG | 6 cut(s) | 1797, 3471, 3738, 3822, 5187, 5862 |
| Sfr274I | CTCGAG | 1 cut(s) | 408 |
| SfuI | TTCGAA | 1 cut(s) | 2942 |
| SinI | GGWCC | 3 cut(s) | 1768, 2553, 4860 |
| SlaI | CTCGAG | 1 cut(s) | 408 |
| SmaI | CCCGGG | 1 cut(s) | 4885 |
| SmlI | CTYRAG | 3 cut(s) | 408, 1015, 3052 |
| SmoI | CTYRAG | 3 cut(s) | 408, 1015, 3052 |
| SphI | GCATGC | 1 cut(s) | 4051 |
| SseBI | AGGCCT | 1 cut(s) | 3397 |
| SspI | AATATT | 2 cut(s) | 616, 3427 |
| StuI | AGGCCT | 1 cut(s) | 3397 |
| StyI | CCWWGG | 6 cut(s) | 574, 671, 726, 943, 3945, 4965 |
| TatI | WGTACW | 7 cut(s) | 1334, 1587, 2213, 4322, 4569, 5107, 5250 |
| TauI | GCSGC | 5 cut(s) | 2660, 2761, 3245, 3898, 5572 |
| TscAI | CASTG | 9 cut(s) | 58, 1038, 1646, 1927, 2342, 2938, 4553, 4938, 6091 |
| TseFI | GTSAC | 7 cut(s) | 4015, 4136, 4165, 4336, 5093, 5226, 5557 |
| Tsp45I | GTSAC | 7 cut(s) | 4015, 4136, 4165, 4336, 5093, 5226, 5557 |
| TspGWI | ACGGA | 3 cut(s) | 2129, 3713, 4573 |
| TspMI | CCCGGG | 1 cut(s) | 4883 |
| TspRI | CASTG | 9 cut(s) | 58, 1038, 1646, 1927, 2342, 2938, 4553, 4938, 6091 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 732, 4229 |
| VneI | GTGCAC | 1 cut(s) | 1560 |
| VpaK11BI | GGWCC | 3 cut(s) | 1768, 2553, 4860 |
| VspI | ATTAAT | 3 cut(s) | 588, 3072, 5880 |
| XapI | RAATTY | 9 cut(s) | 824, 833, 969, 1099, 1457, 1659, 2269, 2295, 3036 |
| XbaI | TCTAGA | 3 cut(s) | 2681, 3929, 4276 |
| XceI | RCATGY | 6 cut(s) | 919, 1594, 3444, 4051, 4751, 5147 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 2606, 4003, 4919 |
| XhoI | CTCGAG | 1 cut(s) | 408 |
| XmaI | CCCGGG | 1 cut(s) | 4883 |
| XmiI | GTMKAC | 2 cut(s) | 1645, 5436 |
| XmnI | GAANNNNTTC | 4 cut(s) | 1461, 1716, 2059, 3336 |
| ZraI | GACGTC | 1 cut(s) | 491 |
| ZrmI | AGTACT | 2 cut(s) | 2215, 5252 |
| Zsp2I | ATGCAT | 3 cut(s) | 1596, 3446, 3938 |