Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0006347

Physical Location & Seq

Genomic Coordinates Forward (+)

8426291 .. 8433491

Gene Structure 7201 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG092200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1683 bp

ATGGATGGCCATGGAACCCACACGACCTCCACTGTGGCAGGCCGAGTCGTTCCCAATGCCTCAGCCATTGGCGGGTTCGCTCGTGGCTCTGCCTCCGGGGGTGCCCCATTGGCACGCGTTGCTGTGTACAAAGTGTGCTGGGCTATACCGGGCGCATCCAAGGCTGAAGGGAACACATGCTTTGAGGAGGACATGTTTGCAGCCATAGATGATGCCATAGCGGACGGTGTGGATGTGCTGAGCATATCAATTGGCACAACTCGACCTATGAATTTCACCGAGGACGGTATTGCTCTCGGTGCATTGCATGCCGCCAAGAAGAACATTGTGGTGGCATGTAGTGCTGGCAACTCAGGCCCTGCCCCATCTACATTATCAAACCCAGCTCCATGGATCATCACGGTTGGTGCCAGCAGCTTGGACCGAACTTTTGTGTCACCCGTTGTGCTTGGAAATGGCTTGAGCATTGAGGGAGAAACAGTGACCCCAAGCAAGCTGGAAGAGAATAAGATGTACCCTTTAGTATATGCAGGGGATGTTGTTAACCCTGGTGTAGCCCAAAATCTGACAGGACAATGCCTCGCAGGCTCTCTTTCACCTGACAAAGTTAAGGGAAAGATAGTGTTCTGCCGGAGAGGTGCTGGGATGAGAGTTTCAAAAGGCATGGAAGTGAAAAGGGCGGGTGGTGTTGGTTTTATCTTAGGAAACAGCAAAGCAAATGGCGTTGAAATCTCGTGTGACGCTCATGTTCTTCCTGCCACTGCAATGACATACAGTAATGCGAATAGAATCATGGAATACATCAACTCTACCAAAAATCCAAAGGCAACTATTATACCAGCAAGGACAGTGTTGAATACAAAGCCAGCTCCATACATGACTGCTTTCACTAGTAGAGGTCCAAGTACGATTGATCCTAACATTCTCAAGCCTGATATCACAGCTCCTGGACTGAATATATTGGCAGCATGGACTGAGGCTGATCCCCCTACCAAGTTGTCAATGGATCACCGAGTAGCTCAGTATAACATCGAGTCTGGAACTTCAATGTCTTGCCCTCACATTGCTGCAGCGGCAGCACTTCTTAAAGCCATCCACCCTACTTGGAGCAGTGCTGCCATCAAATCGGCTCTAATGACCACAGCGGGGATACGAAACAACCTAGATAAGCTATTGAACGATGAATCGGGCAATGCTGCAACTCCCTTTGCATATGGTGCTGGCCACTTCCGACCCACCAAGGCAGCAGACCCTGGCCTTGTGTACGATGCTTCATACAAAGACTATCTTCTCTACTTCTGCGGTACTGGAGTCAAGAATTTCGATCCAAATTTCAAGTGTCCAAGATCACCACCAACAGCAATCAACCTGAACTATCCTTCCATTGCAATCCCCAAACTGAATGGCACCATCACGATTAAGAGGACAGTCACAAATGTTGGTGACCCCAAAAGCGTTTACTTCTTTACCTCCAAACCGCCTCTTGGAATCTCGGTTAAGGCCTCTCCGAGTATATTGTTCTTTGATCAAGTTGGCCAGAGGAAGAGCTTCACCATTACTGTCAAAGCAAGGACGTCAGAGATGCTTAACGAGAATCAGTTGAAAGATGAGTATGCATTTGGGTGGTACACATGGACTGATGGACGTCATATTGTAAGGAGTCCAATTGCAGTCTCTCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0016787 GO:0017171 GO:0019538 GO:0043170 GO:0044238 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

560

Amino Acids

59.05

Weight (kDa)

9.08

Isoelectric Point (pI)

33.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_S8	PF00082	2 - 408	1.5e-34	Subtilase family
PA	PF02225	173 - 264	3.8e-11	PA domain
fn3_6	PF17766	456 - 558	6.3e-30	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006347)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G45650 AT5G45650
fragaria_vesca	FvH4_3g06570 FvH4_3g06570 FvH4_3g06570 FvH4_3g06570 FvH4_3g06570 FvH4_3g06570 FvH4_3g33200
malus_domestica	MD00G1093400.v1.1 MD10G1270100.v1.1
prunus_persica	Prupe.4G071500_v2.0.a1
pyrus_communis	pycom05g27040 pycom10g22620
rosa_chinensis	RchiOBHm_Chr5g0012581
rosa_laevigata	RLG00000031926
rosa_multiflora	Rmu_co8464651.1_g000001 Rmu_sc0002639.1_g000013 Rmu_sc0003577.1_g000010
rosa_roxburghii	Rroxscaffold_1G00064090
rosa_rugosa	Rorug05G0002700 Rorug05G0002700 Rorug05G0002700
rosa_samantha	Rh5AG096500 Rh5CG105600 Rh5DG092200
rosa_wichuraiana	Rw5G008450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	1577, 1648
AccB1I	GGYRCC	3 cut(s)	101, 407, 1406
AccII	CGCG	1 cut(s)	117
AciI	CCGC	8 cut(s)	72, 221, 312, 680, 1073, 1145, 1302, 1478
AclWI	GGATC	5 cut(s)	401, 908, 977, 1014, 1319
AcoI	YGGCCR	3 cut(s)	7, 1222, 1534
AcsI	RAATTY	3 cut(s)	271, 1318, 1330
AcuI	CTGAAG	1 cut(s)	186
AcyI	GRCGYC	2 cut(s)	1574, 1645
AfaI	GTAC	6 cut(s)	128, 515, 907, 1265, 1306, 1628
AfiI	CCNNNNNNNGG	3 cut(s)	72, 1146, 1484
AflIII	ACRYGT	2 cut(s)	115, 192
AgsI	TTSAA	7 cut(s)	657, 728, 856, 1047, 1177, 1336, 1603
AhlI	ACTAGT	1 cut(s)	890
AjnI	CCWGG	3 cut(s)	547, 946, 1252
AloI	GAACNNNNNNTCC	2 cut(s)	1364, 1396
AluBI	AGCT	8 cut(s)	386, 417, 496, 869, 944, 1019, 1171, 1548
AluI	AGCT	8 cut(s)	386, 417, 496, 869, 944, 1019, 1171, 1548
Alw26I	GTCTC	1 cut(s)	1678
AlwI	GGATC	5 cut(s)	401, 908, 977, 1014, 1319
AlwNI	CAGNNNCTG	3 cut(s)	359, 947, 1253
AoxI	GGCC	7 cut(s)	7, 40, 355, 1222, 1255, 1500, 1534
ApeKI	GCWGC	9 cut(s)	200, 414, 965, 1067, 1070, 1076, 1115, 1196, 1244
ApoI	RAATTY	3 cut(s)	271, 1318, 1330
ArsI	GACNNNNNNTTYG	2 cut(s)	413, 445
Asp700I	GAANNNNTTC	1 cut(s)	1547
AspLEI	GCGC	1 cut(s)	155
AspS9I	GGNCC	3 cut(s)	356, 421, 899
AsuC2I	CCSGG	2 cut(s)	97, 150
AsuHPI	GGTGA	7 cut(s)	268, 429, 588, 1001, 1341, 1454, 1543
AvaII	GGWCC	2 cut(s)	421, 899
BaeGI	GKGCMC	1 cut(s)	106
BaeI	ACNNNNGTAYC	2 cut(s)	1296, 1329
BalI	TGGCCA	3 cut(s)	9, 1224, 1536
BanI	GGYRCC	3 cut(s)	101, 407, 1406
BauI	CACGAG	2 cut(s)	81, 733
BbvCI	CCTCAGC	1 cut(s)	61
BbvI	GCAGC	9 cut(s)	212, 426, 977, 1054, 1082, 1088, 1102, 1183, 1256
BccI	CCATC	5 cut(s)	373, 1100, 1127, 1418, 1634
BciT130I	CCWGG	3 cut(s)	549, 948, 1254
BciVI	GTATCC	1 cut(s)	1143
BclI	TGATCA	1 cut(s)	1525
BcnI	CCSGG	2 cut(s)	97, 150
BcoDI	GTCTC	1 cut(s)	1678
BcuI	ACTAGT	1 cut(s)	890
BfaI	CTAG	2 cut(s)	891, 1163
BfmI	CTRYAG	1 cut(s)	1068
BfuI	GTATCC	1 cut(s)	1143
BglI	GCCNNNNNGGC	2 cut(s)	110, 585
BlpI	GCTNAGC	1 cut(s)	239
Bme1390I	CCNGG	5 cut(s)	97, 150, 549, 948, 1254
Bme18I	GGWCC	2 cut(s)	421, 899
BmgT120I	GGNCC	3 cut(s)	356, 421, 899
BmiI	GGNNCC	4 cut(s)	16, 103, 409, 1408
BmrFI	CCNGG	5 cut(s)	97, 150, 549, 948, 1254
BmsI	GCATC	4 cut(s)	164, 202, 1258, 1572
BpmI	CTGGAG	1 cut(s)	1329
Bpu10I	CCTNAGC	1 cut(s)	61
Bpu1102I	GCTNAGC	1 cut(s)	239
BpuEI	CTTGAG	2 cut(s)	481, 911
BpuMI	CCSGG	2 cut(s)	97, 150
BsaHI	GRCGYC	2 cut(s)	1574, 1645
BsaJI	CCNNGG	8 cut(s)	10, 96, 159, 279, 389, 547, 1239, 1252
BsaXI	ACNNNNNCTCC	6 cut(s)	11, 41, 179, 209, 465, 495
Bsc4I	CCNNNNNNNGG	3 cut(s)	72, 1146, 1484
Bse1I	ACTGG	1 cut(s)	1312
Bse3DI	GCAATG	5 cut(s)	302, 771, 1062, 1198, 1383
BseBI	CCWGG	3 cut(s)	549, 948, 1254
BseDI	CCNNGG	8 cut(s)	10, 96, 159, 279, 389, 547, 1239, 1252
BseGI	GGATG	6 cut(s)	10, 155, 238, 541, 651, 1092
BseLI	CCNNNNNNNGG	3 cut(s)	72, 1146, 1484
BseMI	GCAATG	5 cut(s)	302, 771, 1062, 1198, 1383
BseMII	CTCAG	5 cut(s)	75, 230, 366, 966, 1034
BseNI	ACTGG	1 cut(s)	1312
BseRI	GAGGAG	1 cut(s)	200
BseSI	GKGCMC	1 cut(s)	106
BseXI	GCAGC	9 cut(s)	212, 426, 977, 1054, 1082, 1088, 1102, 1183, 1256
BseYI	CCCAGC	3 cut(s)	138, 382, 641
Bsh1236I	CGCG	1 cut(s)	117
BshFI	GGCC	7 cut(s)	9, 42, 357, 1224, 1257, 1502, 1536
BshNI	GGYRCC	3 cut(s)	101, 407, 1406
BsiSI	CCGG	3 cut(s)	96, 149, 631
BslI	CCNNNNNNNGG	3 cut(s)	72, 1146, 1484
BsmAI	GTCTC	1 cut(s)	1678
BsnI	GGCC	7 cut(s)	9, 42, 357, 1224, 1257, 1502, 1536
Bsp1286I	GDGCHC	1 cut(s)	106
Bsp1407I	TGTACA	1 cut(s)	126
Bsp143I	GATC	7 cut(s)	393, 913, 982, 1006, 1324, 1346, 1525
Bsp1720I	GCTNAGC	1 cut(s)	239
Bsp19I	CCATGG	2 cut(s)	10, 389
BspACI	CCGC	8 cut(s)	72, 221, 312, 680, 1073, 1145, 1302, 1478
BspANI	GGCC	7 cut(s)	9, 42, 357, 1224, 1257, 1502, 1536
BspCNI	CTCAG	5 cut(s)	74, 231, 365, 967, 1033
BspFNI	CGCG	1 cut(s)	117
BspLI	GGNNCC	4 cut(s)	16, 103, 409, 1408
BspMAI	CTGCAG	1 cut(s)	1072
BspPI	GGATC	5 cut(s)	401, 908, 977, 1014, 1319
BspQI	GCTCTTC	1 cut(s)	1538
BspT107I	GGYRCC	3 cut(s)	101, 407, 1406
BsrDI	GCAATG	5 cut(s)	302, 771, 1062, 1198, 1383
BsrGI	TGTACA	1 cut(s)	126
BsrI	ACTGG	1 cut(s)	1312
BssECI	CCNNGG	8 cut(s)	10, 96, 159, 279, 389, 547, 1239, 1252
BssMI	GATC	7 cut(s)	393, 913, 982, 1006, 1324, 1346, 1525
BssNI	GRCGYC	2 cut(s)	1574, 1645
BssSI	CACGAG	2 cut(s)	81, 733
BssT1I	CCWWGG	4 cut(s)	10, 159, 389, 1239
Bst2BI	CACGAG	2 cut(s)	81, 733
Bst2UI	CCWGG	3 cut(s)	549, 948, 1254
Bst4CI	ACNGT	9 cut(s)	34, 227, 287, 403, 481, 776, 850, 1429, 1561
Bst6I	CTCTTC	2 cut(s)	495, 1538
BstACI	GRCGYC	2 cut(s)	1574, 1645
BstAPI	GCANNNNNTGC	4 cut(s)	119, 308, 341, 1217
BstAUI	TGTACA	1 cut(s)	126
BstC8I	GCNNGC	9 cut(s)	40, 115, 309, 346, 412, 494, 586, 867, 1222
BstDEI	CTNAG	6 cut(s)	61, 239, 352, 700, 975, 1020
BstDSI	CCRYGG	2 cut(s)	10, 389
BstEII	GGTNACC	1 cut(s)	1442
BstF5I	GGATG	6 cut(s)	10, 155, 238, 541, 651, 1092
BstFNI	CGCG	1 cut(s)	117
BstHHI	GCGC	1 cut(s)	155
BstKTI	GATC	7 cut(s)	396, 916, 985, 1009, 1327, 1349, 1528
BstMAI	GTCTC	1 cut(s)	1678
BstMBI	GATC	7 cut(s)	393, 913, 982, 1006, 1324, 1346, 1525
BstNI	CCWGG	3 cut(s)	549, 948, 1254
BstNSI	RCATGY	4 cut(s)	180, 196, 311, 339
BstPI	GGTNACC	1 cut(s)	1442
BstSCI	CCNGG	5 cut(s)	95, 148, 547, 946, 1252
BstSFI	CTRYAG	1 cut(s)	1068
BstSLI	GKGCMC	1 cut(s)	106
BstUI	CGCG	1 cut(s)	117
BstV1I	GCAGC	9 cut(s)	212, 426, 977, 1054, 1082, 1088, 1102, 1183, 1256
BstXI	CCANNNNNNTGG	2 cut(s)	390, 418
BsuI	GTATCC	1 cut(s)	1143
BsuRI	GGCC	7 cut(s)	9, 42, 357, 1224, 1257, 1502, 1536
BtgI	CCRYGG	2 cut(s)	10, 389
BtsCI	GGATG	6 cut(s)	10, 155, 238, 541, 651, 1092
BtsI	GCAGTG	2 cut(s)	759, 1117
BtsIMutI	CAGTG	5 cut(s)	30, 486, 759, 855, 1117
Cac8I	GCNNGC	9 cut(s)	40, 115, 309, 346, 412, 494, 586, 867, 1222
CaiI	CAGNNNCTG	3 cut(s)	359, 947, 1253
CfoI	GCGC	1 cut(s)	155
Cfr13I	GGNCC	3 cut(s)	356, 421, 899
CseI	GACGC	1 cut(s)	749
Csp6I	GTAC	6 cut(s)	127, 514, 906, 1264, 1305, 1627
CspCI	CAANNNNNGTGG	2 cut(s)	1085, 1120
CviQI	GTAC	6 cut(s)	127, 514, 906, 1264, 1305, 1627
DdeI	CTNAG	6 cut(s)	61, 239, 352, 700, 975, 1020
DpnI	GATC	7 cut(s)	395, 915, 984, 1008, 1326, 1348, 1527
DpnII	GATC	7 cut(s)	393, 913, 982, 1006, 1324, 1346, 1525
EaeI	YGGCCR	3 cut(s)	7, 1222, 1534
Eam1104I	CTCTTC	2 cut(s)	495, 1538
EarI	CTCTTC	2 cut(s)	495, 1538
Eco130I	CCWWGG	4 cut(s)	10, 159, 389, 1239
Eco147I	AGGCCT	1 cut(s)	1502
Eco32I	GATATC	1 cut(s)	937
Eco47I	GGWCC	2 cut(s)	421, 899
Eco57I	CTGAAG	1 cut(s)	186
Eco91I	GGTNACC	1 cut(s)	1442
EcoO109I	RGGNCCY	1 cut(s)	356
EcoO65I	GGTNACC	1 cut(s)	1442
EcoRII	CCWGG	3 cut(s)	547, 946, 1252
EcoRV	GATATC	1 cut(s)	937
EcoT14I	CCWWGG	4 cut(s)	10, 159, 389, 1239
EcoT22I	ATGCAT	1 cut(s)	1618
ErhI	CCWWGG	4 cut(s)	10, 159, 389, 1239
FalI	AAGNNNNNCTT	2 cut(s)	1272, 1304
FauI	CCCGC	3 cut(s)	65, 673, 1138
FauNDI	CATATG	1 cut(s)	1213
FbaI	TGATCA	1 cut(s)	1525
FokI	GGATG	6 cut(s)	17, 142, 245, 548, 658, 1079
FspBI	CTAG	2 cut(s)	891, 1163
GlaI	GCGC	1 cut(s)	154
GsaI	CCCAGC	3 cut(s)	142, 386, 645
GsuI	CTGGAG	1 cut(s)	1329
HaeIII	GGCC	7 cut(s)	9, 42, 357, 1224, 1257, 1502, 1536
HapII	CCGG	3 cut(s)	96, 149, 631
HgaI	GACGC	1 cut(s)	749
HhaI	GCGC	1 cut(s)	155
Hin1I	GRCGYC	2 cut(s)	1574, 1645
Hin6I	GCGC	1 cut(s)	153
HinP1I	GCGC	1 cut(s)	153
HincII	GTYRAC	1 cut(s)	544
HindII	GTYRAC	1 cut(s)	544
HinfI	GANTC	8 cut(s)	45, 789, 1034, 1184, 1311, 1488, 1594, 1660
HpaI	GTTAAC	1 cut(s)	544
HpaII	CCGG	3 cut(s)	96, 149, 631
HphI	GGTGA	7 cut(s)	268, 429, 588, 1001, 1341, 1454, 1543
Hpy166II	GTNNAC	5 cut(s)	127, 544, 1264, 1459, 1629
Hpy188I	TCNGA	4 cut(s)	567, 1232, 1509, 1579
Hpy188III	TCNNGA	3 cut(s)	1038, 1315, 1414
Hpy8I	GTNNAC	5 cut(s)	127, 544, 1264, 1459, 1629
HpyAV	CCTTC	2 cut(s)	161, 1389
HpyCH4III	ACNGT	9 cut(s)	34, 227, 287, 403, 481, 776, 850, 1429, 1561
HpyCH4IV	ACGT	2 cut(s)	1574, 1645
HpyF3I	CTNAG	6 cut(s)	61, 239, 352, 700, 975, 1020
HpySE526I	ACGT	2 cut(s)	1574, 1645
Hsp92I	GRCGYC	2 cut(s)	1574, 1645
HspAI	GCGC	1 cut(s)	153
Ksp22I	TGATCA	1 cut(s)	1525
KspAI	GTTAAC	1 cut(s)	544
Kzo9I	GATC	7 cut(s)	393, 913, 982, 1006, 1324, 1346, 1525
LguI	GCTCTTC	1 cut(s)	1538
LmnI	GCTCC	4 cut(s)	391, 874, 949, 1107
Lsp1109I	GCAGC	9 cut(s)	212, 426, 977, 1054, 1082, 1088, 1102, 1183, 1256
LweI	GCATC	4 cut(s)	164, 202, 1258, 1572
MaeI	CTAG	2 cut(s)	891, 1163
MaeII	ACGT	2 cut(s)	1574, 1645
MaeIII	GTNAC	5 cut(s)	435, 481, 737, 1429, 1442
MalI	GATC	7 cut(s)	395, 915, 984, 1008, 1326, 1348, 1527
MboI	GATC	7 cut(s)	393, 913, 982, 1006, 1324, 1346, 1525
MboII	GAAGA	5 cut(s)	331, 512, 743, 1280, 1555
MfeI	CAATTG	2 cut(s)	249, 1665
MhlI	GDGCHC	1 cut(s)	106
MlsI	TGGCCA	3 cut(s)	9, 1224, 1536
MluCI	AATT	5 cut(s)	249, 271, 1318, 1330, 1665
MluI	ACGCGT	1 cut(s)	115
MluNI	TGGCCA	3 cut(s)	9, 1224, 1536
MlyI	GAGTC	4 cut(s)	54, 1043, 1320, 1669
MmeI	TCCRAC	1 cut(s)	1255
Mox20I	TGGCCA	3 cut(s)	9, 1224, 1536
Mph1103I	ATGCAT	1 cut(s)	1618
MroXI	GAANNNNTTC	1 cut(s)	1547
MscI	TGGCCA	3 cut(s)	9, 1224, 1536
MseI	TTAA	6 cut(s)	543, 609, 1086, 1419, 1497, 1587
MslI	CAYNNNNRTG	4 cut(s)	329, 668, 764, 1621
Msp20I	TGGCCA	3 cut(s)	9, 1224, 1536
MspA1I	CMGCKG	2 cut(s)	1073, 1145
MspI	CCGG	3 cut(s)	96, 149, 631
MspR9I	CCNGG	5 cut(s)	97, 150, 549, 948, 1254
MunI	CAATTG	2 cut(s)	249, 1665
MvaI	CCWGG	3 cut(s)	549, 948, 1254
MvnI	CGCG	1 cut(s)	117
NciI	CCSGG	2 cut(s)	97, 150
NcoI	CCATGG	2 cut(s)	10, 389
NdeI	CATATG	1 cut(s)	1213
NdeII	GATC	7 cut(s)	393, 913, 982, 1006, 1324, 1346, 1525
NlaIV	GGNNCC	4 cut(s)	16, 103, 409, 1408
NmeAIII	GCCGAG	1 cut(s)	68
NmuCI	GTSAC	5 cut(s)	435, 481, 737, 1429, 1442
NsiI	ATGCAT	1 cut(s)	1618
NspI	RCATGY	4 cut(s)	180, 196, 311, 339
PaeI	GCATGC	1 cut(s)	311
PceI	AGGCCT	1 cut(s)	1502
PciI	ACATGT	1 cut(s)	192
PciSI	GCTCTTC	1 cut(s)	1538
PdmI	GAANNNNTTC	1 cut(s)	1547
PfeI	GAWTC	4 cut(s)	789, 1184, 1488, 1594
PfoI	TCCNGGA	1 cut(s)	946
PleI	GAGTC	4 cut(s)	53, 1042, 1319, 1668
PpsI	GAGTC	4 cut(s)	53, 1042, 1319, 1668
PscI	ACATGT	1 cut(s)	192
Psp6I	CCWGG	3 cut(s)	547, 946, 1252
PspEI	GGTNACC	1 cut(s)	1442
PspFI	CCCAGC	3 cut(s)	138, 382, 641
PspGI	CCWGG	3 cut(s)	547, 946, 1252
PspN4I	GGNNCC	4 cut(s)	16, 103, 409, 1408
PspPI	GGNCC	3 cut(s)	356, 421, 899
PstI	CTGCAG	1 cut(s)	1072
PstNI	CAGNNNCTG	3 cut(s)	359, 947, 1253
RsaI	GTAC	6 cut(s)	128, 515, 907, 1265, 1306, 1628
RsaNI	GTAC	6 cut(s)	127, 514, 906, 1264, 1305, 1627
RseI	CAYNNNNRTG	4 cut(s)	329, 668, 764, 1621
SapI	GCTCTTC	1 cut(s)	1538
SaqAI	TTAA	6 cut(s)	543, 609, 1086, 1419, 1497, 1587
Sau3AI	GATC	7 cut(s)	393, 913, 982, 1006, 1324, 1346, 1525
Sau96I	GGNCC	3 cut(s)	356, 421, 899
SchI	GAGTC	4 cut(s)	54, 1043, 1320, 1669
ScrFI	CCNGG	5 cut(s)	97, 150, 549, 948, 1254
SduI	GDGCHC	1 cut(s)	106
SfaNI	GCATC	4 cut(s)	164, 202, 1258, 1572
SfcI	CTRYAG	1 cut(s)	1068
SinI	GGWCC	2 cut(s)	421, 899
SmiMI	CAYNNNNRTG	4 cut(s)	329, 668, 764, 1621
SmlI	CTYRAG	2 cut(s)	460, 926
SmoI	CTYRAG	2 cut(s)	460, 926
SpeI	ACTAGT	1 cut(s)	890
SphI	GCATGC	1 cut(s)	311
Sse9I	AATT	5 cut(s)	249, 271, 1318, 1330, 1665
SseBI	AGGCCT	1 cut(s)	1502
SsiI	CCGC	8 cut(s)	72, 221, 312, 680, 1073, 1145, 1302, 1478
SspMI	CTAG	2 cut(s)	891, 1163
StuI	AGGCCT	1 cut(s)	1502
StyD4I	CCNGG	5 cut(s)	95, 148, 547, 946, 1252
StyI	CCWWGG	4 cut(s)	10, 159, 389, 1239
TaaI	ACNGT	9 cut(s)	34, 227, 287, 403, 481, 776, 850, 1429, 1561
TaiI	ACGT	2 cut(s)	1577, 1648
TaqI	TCGA	3 cut(s)	262, 1032, 1323
TaqII	GACCGA	1 cut(s)	438
TasI	AATT	5 cut(s)	249, 271, 1318, 1330, 1665
TatI	WGTACW	1 cut(s)	126
TauI	GCSGC	2 cut(s)	314, 1076
TfiI	GAWTC	4 cut(s)	789, 1184, 1488, 1594
Tru1I	TTAA	6 cut(s)	543, 609, 1086, 1419, 1497, 1587
Tru9I	TTAA	6 cut(s)	543, 609, 1086, 1419, 1497, 1587
TscAI	CASTG	5 cut(s)	37, 486, 766, 855, 1117
TseFI	GTSAC	5 cut(s)	435, 481, 737, 1429, 1442
TseI	GCWGC	9 cut(s)	200, 414, 965, 1067, 1070, 1076, 1115, 1196, 1244
Tsp45I	GTSAC	5 cut(s)	435, 481, 737, 1429, 1442
TspDTI	ATGAA	3 cut(s)	284, 1197, 1263
TspRI	CASTG	5 cut(s)	37, 486, 766, 855, 1117
VpaK11BI	GGWCC	2 cut(s)	421, 899
XapI	RAATTY	3 cut(s)	271, 1318, 1330
XceI	RCATGY	4 cut(s)	180, 196, 311, 339
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1000
XmnI	GAANNNNTTC	1 cut(s)	1547
XspI	CTAG	2 cut(s)	891, 1163
ZraI	GACGTC	2 cut(s)	1575, 1646
Zsp2I	ATGCAT	1 cut(s)	1618

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.