Inactive beta-amylase 4
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G27420 |
| fragaria_vesca | FvH4_3g20680 FvH4_3g29210 |
| malus_domestica | MD03G1138200.v1.1 MD03G1177900.v1.1 MD03G1180300.v1.1 MD03G1181200.v1.1 MD03G1182200.v1.1 MD03G1222900.v1.1 MD11G1240300.v1.1 |
| prunus_persica | Prupe.4G186700_v2.0.a1 Prupe.8G022900_v2.0.a1 |
| pyrus_communis | pycom03g13470 pycom11g21230 |
| rosa_chinensis | RchiOBHm_Chr5g0034741 RchiOBHm_Chr5g0053511 RchiOBHm_Chr5g0053631 |
| rosa_laevigata | RLG00000033574 RLG00000034891 |
| rosa_multiflora | Rmu_sc0002460.1_g000057 Rmu_sc0003228.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00045590 |
| rosa_rugosa | Rorug05G0147900 |
| rosa_samantha | Rh5AG240600 Rh5AG351700 Rh5AG352400 Rh5BG240700 Rh5BG364000 Rh5CG271700 Rh5DG249000 Rh5DG378600 |
| rosa_wichuraiana | Rw5G021980 Rw5G033270 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 317 |
| Acc16I | TGCGCA | 1 cut(s) | 2346 |
| Acc36I | ACCTGC | 1 cut(s) | 317 |
| Acc65I | GGTACC | 2 cut(s) | 1125, 2284 |
| AccB1I | GGYRCC | 3 cut(s) | 1125, 2284, 3067 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 902, 2998 |
| AccBSI | CCGCTC | 1 cut(s) | 1999 |
| AccIII | TCCGGA | 1 cut(s) | 1676 |
| AclI | AACGTT | 1 cut(s) | 373 |
| AclWI | GGATC | 4 cut(s) | 533, 1190, 3022, 3095 |
| AcoI | YGGCCR | 6 cut(s) | 634, 849, 1583, 1726, 2507, 3000 |
| AcsI | RAATTY | 6 cut(s) | 102, 213, 686, 720, 1050, 1653 |
| AcuI | CTGAAG | 1 cut(s) | 46 |
| AfaI | GTAC | 5 cut(s) | 827, 1127, 2286, 3095, 3119 |
| AflIII | ACRYGT | 1 cut(s) | 2181 |
| AjnI | CCWGG | 3 cut(s) | 44, 793, 1645 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 684, 711, 716, 743, 1797, 1829 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3042, 3074 |
| Alw21I | GWGCWC | 3 cut(s) | 166, 934, 2751 |
| Alw44I | GTGCAC | 1 cut(s) | 162 |
| AlwI | GGATC | 4 cut(s) | 533, 1190, 3022, 3095 |
| Aor13HI | TCCGGA | 1 cut(s) | 1676 |
| ApaLI | GTGCAC | 1 cut(s) | 162 |
| ApeKI | GCWGC | 4 cut(s) | 1043, 1229, 1290, 2524 |
| ApoI | RAATTY | 6 cut(s) | 102, 213, 686, 720, 1050, 1653 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2255, 2287 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 94, 960, 2841 |
| Asp718I | GGTACC | 2 cut(s) | 1125, 2284 |
| AspLEI | GCGC | 1 cut(s) | 2347 |
| AspS9I | GGNCC | 5 cut(s) | 737, 890, 1670, 2471, 2989 |
| AsuHPI | GGTGA | 7 cut(s) | 136, 551, 758, 785, 1277, 1661, 2020 |
| AsuII | TTCGAA | 1 cut(s) | 1328 |
| AvaII | GGWCC | 5 cut(s) | 737, 890, 1670, 2471, 2989 |
| AxyI | CCTNAGG | 1 cut(s) | 1976 |
| BaeGI | GKGCMC | 1 cut(s) | 166 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 740, 773 |
| BalI | TGGCCA | 2 cut(s) | 1728, 3002 |
| BanI | GGYRCC | 3 cut(s) | 1125, 2284, 3067 |
| BanII | GRGCYC | 1 cut(s) | 934 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 3110, 3142 |
| BauI | CACGAG | 2 cut(s) | 157, 3346 |
| BbsI | GAAGAC | 6 cut(s) | 506, 911, 1077, 2484, 2766, 3013 |
| Bbv12I | GWGCWC | 3 cut(s) | 166, 934, 2751 |
| BbvI | GCAGC | 4 cut(s) | 1055, 1216, 1302, 2536 |
| BceAI | ACGGC | 2 cut(s) | 1701, 1771 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 3327 |
| BciT130I | CCWGG | 3 cut(s) | 46, 795, 1647 |
| BciVI | GTATCC | 4 cut(s) | 768, 1157, 1912, 3044 |
| BclI | TGATCA | 1 cut(s) | 2368 |
| BfaI | CTAG | 7 cut(s) | 605, 1658, 1709, 1847, 2040, 3041, 3072 |
| BfmI | CTRYAG | 2 cut(s) | 1288, 2241 |
| BfuAI | ACCTGC | 1 cut(s) | 317 |
| BfuI | GTATCC | 4 cut(s) | 768, 1157, 1912, 3044 |
| BisI | GCNGC | 7 cut(s) | 121, 852, 1044, 1230, 1291, 1586, 2525 |
| BlsI | GCNGC | 7 cut(s) | 122, 853, 1045, 1231, 1292, 1587, 2526 |
| Bme1390I | CCNGG | 3 cut(s) | 46, 795, 1647 |
| Bme18I | GGWCC | 5 cut(s) | 737, 890, 1670, 2471, 2989 |
| BmgT120I | GGNCC | 5 cut(s) | 737, 890, 1670, 2471, 2989 |
| BmiI | GGNNCC | 4 cut(s) | 891, 1127, 2286, 3069 |
| BmrFI | CCNGG | 3 cut(s) | 46, 795, 1647 |
| BmrI | ACTGGG | 1 cut(s) | 1936 |
| BmsI | GCATC | 8 cut(s) | 222, 232, 311, 1015, 2106, 2391, 2745, 3163 |
| BmuI | ACTGGG | 1 cut(s) | 1936 |
| BpiI | GAAGAC | 6 cut(s) | 506, 911, 1077, 2484, 2766, 3013 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1704, 1736, 2564, 2596 |
| BpmI | CTGGAG | 2 cut(s) | 948, 3198 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2959 |
| Bpu14I | TTCGAA | 1 cut(s) | 1328 |
| BpuEI | CTTGAG | 4 cut(s) | 272, 302, 2573, 2937 |
| Bsa29I | ATCGAT | 1 cut(s) | 1502 |
| BsaBI | GATNNNNATC | 2 cut(s) | 594, 1550 |
| BsaI | GGTCTC | 3 cut(s) | 405, 2242, 3141 |
| BsaJI | CCNNGG | 6 cut(s) | 272, 334, 793, 1887, 2361, 2832 |
| BsaWI | WCCGGW | 1 cut(s) | 1676 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1451, 1481, 3174, 3204 |
| Bse1I | ACTGG | 9 cut(s) | 401, 672, 811, 1511, 1795, 1942, 2124, 2166, 2879 |
| Bse21I | CCTNAGG | 1 cut(s) | 1976 |
| Bse3DI | GCAATG | 3 cut(s) | 12, 1782, 2991 |
| Bse8I | GATNNNNATC | 2 cut(s) | 594, 1550 |
| BseAI | TCCGGA | 1 cut(s) | 1676 |
| BseBI | CCWGG | 3 cut(s) | 46, 795, 1647 |
| BseCI | ATCGAT | 1 cut(s) | 1502 |
| BseDI | CCNNGG | 6 cut(s) | 272, 334, 793, 1887, 2361, 2832 |
| BseGI | GGATG | 5 cut(s) | 1192, 1267, 1673, 2062, 2371 |
| BseJI | GATNNNNATC | 2 cut(s) | 594, 1550 |
| BseMI | GCAATG | 3 cut(s) | 12, 1782, 2991 |
| BseMII | CTCAG | 7 cut(s) | 166, 423, 1172, 1596, 1967, 2106, 2950 |
| BseNI | ACTGG | 9 cut(s) | 401, 672, 811, 1511, 1795, 1942, 2124, 2166, 2879 |
| BseRI | GAGGAG | 7 cut(s) | 64, 1606, 2507, 2560, 2565, 2574, 3195 |
| BseSI | GKGCMC | 1 cut(s) | 166 |
| BseXI | GCAGC | 4 cut(s) | 1055, 1216, 1302, 2536 |
| BsgI | GTGCAG | 1 cut(s) | 747 |
| BshNI | GGYRCC | 3 cut(s) | 1125, 2284, 3067 |
| BshVI | ATCGAT | 1 cut(s) | 1502 |
| BsiHKAI | GWGCWC | 3 cut(s) | 166, 934, 2751 |
| BsiSI | CCGG | 5 cut(s) | 135, 637, 1677, 1737, 2070 |
| BslFI | GGGAC | 1 cut(s) | 903 |
| BsmBI | CGTCTC | 1 cut(s) | 1724 |
| BsmFI | GGGAC | 1 cut(s) | 903 |
| BsmI | GAATGC | 1 cut(s) | 245 |
| Bso31I | GGTCTC | 3 cut(s) | 405, 2242, 3141 |
| Bsp119I | TTCGAA | 1 cut(s) | 1328 |
| Bsp1286I | GDGCHC | 3 cut(s) | 166, 934, 2751 |
| Bsp13I | TCCGGA | 1 cut(s) | 1676 |
| Bsp143I | GATC | 7 cut(s) | 525, 1195, 1350, 1545, 2368, 3014, 3087 |
| Bsp19I | CCATGG | 3 cut(s) | 334, 2361, 2832 |
| BspCNI | CTCAG | 8 cut(s) | 4, 165, 424, 1173, 1597, 1968, 2107, 2949 |
| BspDI | ATCGAT | 1 cut(s) | 1502 |
| BspEI | TCCGGA | 1 cut(s) | 1676 |
| BspHI | TCATGA | 2 cut(s) | 1966, 3303 |
| BspLI | GGNNCC | 4 cut(s) | 891, 1127, 2286, 3069 |
| BspMAI | CTGCAG | 2 cut(s) | 1292, 2245 |
| BspMI | ACCTGC | 1 cut(s) | 317 |
| BspPI | GGATC | 4 cut(s) | 533, 1190, 3022, 3095 |
| BspT104I | TTCGAA | 1 cut(s) | 1328 |
| BspT107I | GGYRCC | 3 cut(s) | 1125, 2284, 3067 |
| BspTNI | GGTCTC | 3 cut(s) | 405, 2242, 3141 |
| BsrBI | CCGCTC | 1 cut(s) | 1999 |
| BsrDI | GCAATG | 3 cut(s) | 12, 1782, 2991 |
| BsrI | ACTGG | 9 cut(s) | 401, 672, 811, 1511, 1795, 1942, 2124, 2166, 2879 |
| BssECI | CCNNGG | 6 cut(s) | 272, 334, 793, 1887, 2361, 2832 |
| BssMI | GATC | 7 cut(s) | 525, 1195, 1350, 1545, 2368, 3014, 3087 |
| BssSI | CACGAG | 2 cut(s) | 157, 3346 |
| BssT1I | CCWWGG | 5 cut(s) | 272, 334, 1887, 2361, 2832 |
| Bst2BI | CACGAG | 2 cut(s) | 157, 3346 |
| Bst2UI | CCWGG | 3 cut(s) | 46, 795, 1647 |
| Bst4CI | ACNGT | 5 cut(s) | 1135, 1314, 1412, 1834, 2772 |
| Bst6I | CTCTTC | 5 cut(s) | 116, 490, 939, 1887, 3131 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 1145, 2026, 2755 |
| BstBI | TTCGAA | 1 cut(s) | 1328 |
| BstDSI | CCRYGG | 3 cut(s) | 334, 2361, 2832 |
| BstF5I | GGATG | 5 cut(s) | 1192, 1267, 1673, 2062, 2371 |
| BstHHI | GCGC | 1 cut(s) | 2347 |
| BstKTI | GATC | 7 cut(s) | 528, 1198, 1353, 1548, 2371, 3017, 3090 |
| BstMBI | GATC | 7 cut(s) | 525, 1195, 1350, 1545, 2368, 3014, 3087 |
| BstNI | CCWGG | 3 cut(s) | 46, 795, 1647 |
| BstNSI | RCATGY | 8 cut(s) | 455, 832, 858, 1241, 2185, 2351, 2377, 2918 |
| BstSCI | CCNGG | 3 cut(s) | 44, 793, 1645 |
| BstSFI | CTRYAG | 2 cut(s) | 1288, 2241 |
| BstSLI | GKGCMC | 1 cut(s) | 166 |
| BstV1I | GCAGC | 4 cut(s) | 1055, 1216, 1302, 2536 |
| BstV2I | GAAGAC | 6 cut(s) | 506, 911, 1077, 2484, 2766, 3013 |
| Bsu15I | ATCGAT | 1 cut(s) | 1502 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1976 |
| BsuI | GTATCC | 4 cut(s) | 768, 1157, 1912, 3044 |
| BsuTUI | ATCGAT | 1 cut(s) | 1502 |
| BtgI | CCRYGG | 3 cut(s) | 334, 2361, 2832 |
| BtsCI | GGATG | 5 cut(s) | 1192, 1267, 1673, 2062, 2371 |
| BtsI | GCAGTG | 2 cut(s) | 1173, 1854 |
| BtsIMutI | CAGTG | 9 cut(s) | 818, 1173, 1788, 1839, 1854, 1949, 2131, 2539, 2944 |
| BveI | ACCTGC | 1 cut(s) | 317 |
| CciI | TCATGA | 2 cut(s) | 1966, 3303 |
| CfoI | GCGC | 1 cut(s) | 2347 |
| Cfr13I | GGNCC | 5 cut(s) | 737, 890, 1670, 2471, 2989 |
| ClaI | ATCGAT | 1 cut(s) | 1502 |
| CsiI | ACCWGGT | 1 cut(s) | 1645 |
| Csp6I | GTAC | 5 cut(s) | 826, 1126, 2285, 3094, 3118 |
| CviQI | GTAC | 5 cut(s) | 826, 1126, 2285, 3094, 3118 |
| DpnI | GATC | 7 cut(s) | 527, 1197, 1352, 1547, 2370, 3016, 3089 |
| DpnII | GATC | 7 cut(s) | 525, 1195, 1350, 1545, 2368, 3014, 3087 |
| EaeI | YGGCCR | 6 cut(s) | 634, 849, 1583, 1726, 2507, 3000 |
| Eam1104I | CTCTTC | 5 cut(s) | 116, 490, 939, 1887, 3131 |
| EarI | CTCTTC | 5 cut(s) | 116, 490, 939, 1887, 3131 |
| EciI | GGCGGA | 1 cut(s) | 1442 |
| Ecl136II | GAGCTC | 1 cut(s) | 932 |
| Eco130I | CCWWGG | 5 cut(s) | 272, 334, 1887, 2361, 2832 |
| Eco147I | AGGCCT | 3 cut(s) | 181, 293, 2886 |
| Eco24I | GRGCYC | 1 cut(s) | 934 |
| Eco31I | GGTCTC | 3 cut(s) | 405, 2242, 3141 |
| Eco47I | GGWCC | 5 cut(s) | 737, 890, 1670, 2471, 2989 |
| Eco53kI | GAGCTC | 1 cut(s) | 932 |
| Eco57I | CTGAAG | 1 cut(s) | 46 |
| Eco81I | CCTNAGG | 1 cut(s) | 1976 |
| EcoICRI | GAGCTC | 1 cut(s) | 932 |
| EcoRI | GAATTC | 2 cut(s) | 102, 213 |
| EcoRII | CCWGG | 3 cut(s) | 44, 793, 1645 |
| EcoT14I | CCWWGG | 5 cut(s) | 272, 334, 1887, 2361, 2832 |
| EcoT22I | ATGCAT | 2 cut(s) | 247, 2099 |
| EcoT38I | GRGCYC | 1 cut(s) | 934 |
| ErhI | CCWWGG | 5 cut(s) | 272, 334, 1887, 2361, 2832 |
| Esp3I | CGTCTC | 1 cut(s) | 1724 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 2013, 2045, 2391, 2423 |
| FaqI | GGGAC | 1 cut(s) | 903 |
| FauNDI | CATATG | 1 cut(s) | 391 |
| FbaI | TGATCA | 1 cut(s) | 2368 |
| Fnu4HI | GCNGC | 7 cut(s) | 121, 852, 1044, 1230, 1291, 1586, 2525 |
| FokI | GGATG | 5 cut(s) | 1199, 1274, 1660, 2069, 2378 |
| FriOI | GRGCYC | 1 cut(s) | 934 |
| Fsp4HI | GCNGC | 7 cut(s) | 121, 852, 1044, 1230, 1291, 1586, 2525 |
| FspAI | RTGCGCAY | 1 cut(s) | 2346 |
| FspBI | CTAG | 7 cut(s) | 605, 1658, 1709, 1847, 2040, 3041, 3072 |
| FspI | TGCGCA | 1 cut(s) | 2346 |
| GlaI | GCGC | 1 cut(s) | 2346 |
| GluI | GCNGC | 7 cut(s) | 121, 852, 1044, 1230, 1291, 1586, 2525 |
| GsuI | CTGGAG | 2 cut(s) | 948, 3198 |
| HapII | CCGG | 5 cut(s) | 135, 637, 1677, 1737, 2070 |
| HhaI | GCGC | 1 cut(s) | 2347 |
| Hin6I | GCGC | 1 cut(s) | 2345 |
| HinP1I | GCGC | 1 cut(s) | 2345 |
| HincII | GTYRAC | 1 cut(s) | 2331 |
| HindII | GTYRAC | 1 cut(s) | 2331 |
| HindIII | AAGCTT | 1 cut(s) | 958 |
| HpaII | CCGG | 5 cut(s) | 135, 637, 1677, 1737, 2070 |
| HphI | GGTGA | 7 cut(s) | 136, 551, 758, 785, 1277, 1661, 2020 |
| Hpy166II | GTNNAC | 5 cut(s) | 164, 481, 749, 2035, 2331 |
| Hpy8I | GTNNAC | 5 cut(s) | 164, 481, 749, 2035, 2331 |
| HpyCH4III | ACNGT | 5 cut(s) | 1135, 1314, 1412, 1834, 2772 |
| HpyCH4IV | ACGT | 3 cut(s) | 373, 1533, 2316 |
| HpySE526I | ACGT | 3 cut(s) | 373, 1533, 2316 |
| HspAI | GCGC | 1 cut(s) | 2345 |
| Kpn2I | TCCGGA | 1 cut(s) | 1676 |
| KpnI | GGTACC | 2 cut(s) | 1129, 2288 |
| Ksp22I | TGATCA | 1 cut(s) | 2368 |
| Kzo9I | GATC | 7 cut(s) | 525, 1195, 1350, 1545, 2368, 3014, 3087 |
| LmnI | GCTCC | 7 cut(s) | 929, 937, 1226, 1472, 1593, 2763, 3248 |
| Lsp1109I | GCAGC | 4 cut(s) | 1055, 1216, 1302, 2536 |
| LweI | GCATC | 8 cut(s) | 222, 232, 311, 1015, 2106, 2391, 2745, 3163 |
| MabI | ACCWGGT | 1 cut(s) | 1645 |
| MaeI | CTAG | 7 cut(s) | 605, 1658, 1709, 1847, 2040, 3041, 3072 |
| MaeII | ACGT | 3 cut(s) | 373, 1533, 2316 |
| MaeIII | GTNAC | 8 cut(s) | 539, 1412, 1513, 1627, 2931, 3167, 3275, 3316 |
| MalI | GATC | 7 cut(s) | 527, 1197, 1352, 1547, 2370, 3016, 3089 |
| MbiI | CCGCTC | 1 cut(s) | 1999 |
| MboI | GATC | 7 cut(s) | 525, 1195, 1350, 1545, 2368, 3014, 3087 |
| MhlI | GDGCHC | 3 cut(s) | 166, 934, 2751 |
| MlsI | TGGCCA | 2 cut(s) | 1728, 3002 |
| MluNI | TGGCCA | 2 cut(s) | 1728, 3002 |
| MlyI | GAGTC | 4 cut(s) | 279, 443, 1687, 2582 |
| Mox20I | TGGCCA | 2 cut(s) | 1728, 3002 |
| Mph1103I | ATGCAT | 2 cut(s) | 247, 2099 |
| MroI | TCCGGA | 1 cut(s) | 1676 |
| MroXI | GAANNNNTTC | 3 cut(s) | 94, 960, 2841 |
| MscI | TGGCCA | 2 cut(s) | 1728, 3002 |
| MseI | TTAA | 5 cut(s) | 296, 443, 681, 1494, 1937 |
| MslI | CAYNNNNRTG | 7 cut(s) | 224, 474, 771, 1023, 2352, 2387, 3163 |
| Msp20I | TGGCCA | 2 cut(s) | 1728, 3002 |
| MspA1I | CMGCKG | 1 cut(s) | 1160 |
| MspI | CCGG | 5 cut(s) | 135, 637, 1677, 1737, 2070 |
| MspR9I | CCNGG | 3 cut(s) | 46, 795, 1647 |
| Mva1269I | GAATGC | 1 cut(s) | 245 |
| MvaI | CCWGG | 3 cut(s) | 46, 795, 1647 |
| NcoI | CCATGG | 3 cut(s) | 334, 2361, 2832 |
| NdeI | CATATG | 1 cut(s) | 391 |
| NdeII | GATC | 7 cut(s) | 525, 1195, 1350, 1545, 2368, 3014, 3087 |
| NlaIV | GGNNCC | 4 cut(s) | 891, 1127, 2286, 3069 |
| NmuCI | GTSAC | 4 cut(s) | 539, 1513, 1627, 3167 |
| NsbI | TGCGCA | 1 cut(s) | 2346 |
| NsiI | ATGCAT | 2 cut(s) | 247, 2099 |
| NspI | RCATGY | 8 cut(s) | 455, 832, 858, 1241, 2185, 2351, 2377, 2918 |
| NspV | TTCGAA | 1 cut(s) | 1328 |
| PaeI | GCATGC | 2 cut(s) | 2351, 2918 |
| PagI | TCATGA | 2 cut(s) | 1966, 3303 |
| PaqCI | CACCTGC | 1 cut(s) | 317 |
| PceI | AGGCCT | 3 cut(s) | 181, 293, 2886 |
| PciI | ACATGT | 1 cut(s) | 2181 |
| PctI | GAATGC | 1 cut(s) | 245 |
| PdmI | GAANNNNTTC | 3 cut(s) | 94, 960, 2841 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 902, 2998 |
| PkrI | GCNGC | 7 cut(s) | 122, 853, 1045, 1231, 1292, 1587, 2526 |
| PleI | GAGTC | 4 cut(s) | 279, 442, 1687, 2581 |
| PpsI | GAGTC | 4 cut(s) | 279, 442, 1687, 2581 |
| PscI | ACATGT | 1 cut(s) | 2181 |
| Psp124BI | GAGCTC | 1 cut(s) | 934 |
| Psp1406I | AACGTT | 1 cut(s) | 373 |
| Psp6I | CCWGG | 3 cut(s) | 44, 793, 1645 |
| PspGI | CCWGG | 3 cut(s) | 44, 793, 1645 |
| PspN4I | GGNNCC | 4 cut(s) | 891, 1127, 2286, 3069 |
| PspPI | GGNCC | 5 cut(s) | 737, 890, 1670, 2471, 2989 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 3086, 3118 |
| PstI | CTGCAG | 2 cut(s) | 1292, 2245 |
| PvuII | CAGCTG | 1 cut(s) | 1160 |
| RsaI | GTAC | 5 cut(s) | 827, 1127, 2286, 3095, 3119 |
| RsaNI | GTAC | 5 cut(s) | 826, 1126, 2285, 3094, 3118 |
| RseI | CAYNNNNRTG | 7 cut(s) | 224, 474, 771, 1023, 2352, 2387, 3163 |
| SacI | GAGCTC | 1 cut(s) | 934 |
| SaqAI | TTAA | 5 cut(s) | 296, 443, 681, 1494, 1937 |
| SatI | GCNGC | 7 cut(s) | 121, 852, 1044, 1230, 1291, 1586, 2525 |
| Sau3AI | GATC | 7 cut(s) | 525, 1195, 1350, 1545, 2368, 3014, 3087 |
| Sau96I | GGNCC | 5 cut(s) | 737, 890, 1670, 2471, 2989 |
| SchI | GAGTC | 4 cut(s) | 279, 443, 1687, 2582 |
| ScrFI | CCNGG | 3 cut(s) | 46, 795, 1647 |
| SduI | GDGCHC | 3 cut(s) | 166, 934, 2751 |
| SexAI | ACCWGGT | 1 cut(s) | 1645 |
| SfaNI | GCATC | 8 cut(s) | 222, 232, 311, 1015, 2106, 2391, 2745, 3163 |
| SfcI | CTRYAG | 2 cut(s) | 1288, 2241 |
| SfuI | TTCGAA | 1 cut(s) | 1328 |
| SinI | GGWCC | 5 cut(s) | 737, 890, 1670, 2471, 2989 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 224, 474, 771, 1023, 2352, 2387, 3163 |
| SmlI | CTYRAG | 4 cut(s) | 287, 317, 2588, 2952 |
| SmoI | CTYRAG | 4 cut(s) | 287, 317, 2588, 2952 |
| SphI | GCATGC | 2 cut(s) | 2351, 2918 |
| SseBI | AGGCCT | 3 cut(s) | 181, 293, 2886 |
| SspI | AATATT | 1 cut(s) | 1578 |
| SspMI | CTAG | 7 cut(s) | 605, 1658, 1709, 1847, 2040, 3041, 3072 |
| SstI | GAGCTC | 1 cut(s) | 934 |
| StuI | AGGCCT | 3 cut(s) | 181, 293, 2886 |
| StyD4I | CCNGG | 3 cut(s) | 44, 793, 1645 |
| StyI | CCWWGG | 5 cut(s) | 272, 334, 1887, 2361, 2832 |
| TaaI | ACNGT | 5 cut(s) | 1135, 1314, 1412, 1834, 2772 |
| TaiI | ACGT | 3 cut(s) | 376, 1536, 2319 |
| TaqI | TCGA | 5 cut(s) | 565, 1328, 1502, 1507, 1839 |
| TatI | WGTACW | 1 cut(s) | 825 |
| TauI | GCSGC | 3 cut(s) | 123, 854, 1588 |
| Tru1I | TTAA | 5 cut(s) | 296, 443, 681, 1494, 1937 |
| Tru9I | TTAA | 5 cut(s) | 296, 443, 681, 1494, 1937 |
| TscAI | CASTG | 9 cut(s) | 818, 1180, 1795, 1839, 1861, 1949, 2131, 2539, 2944 |
| TseFI | GTSAC | 4 cut(s) | 539, 1513, 1627, 3167 |
| TseI | GCWGC | 4 cut(s) | 1043, 1229, 1290, 2524 |
| Tsp45I | GTSAC | 4 cut(s) | 539, 1513, 1627, 3167 |
| TspGWI | ACGGA | 2 cut(s) | 1477, 3235 |
| TspRI | CASTG | 9 cut(s) | 818, 1180, 1795, 1839, 1861, 1949, 2131, 2539, 2944 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 902, 2998 |
| VneI | GTGCAC | 1 cut(s) | 162 |
| VpaK11BI | GGWCC | 5 cut(s) | 737, 890, 1670, 2471, 2989 |
| XapI | RAATTY | 6 cut(s) | 102, 213, 686, 720, 1050, 1653 |
| XceI | RCATGY | 8 cut(s) | 455, 832, 858, 1241, 2185, 2351, 2377, 2918 |
| XmnI | GAANNNNTTC | 3 cut(s) | 94, 960, 2841 |
| XspI | CTAG | 7 cut(s) | 605, 1658, 1709, 1847, 2040, 3041, 3072 |
| Zsp2I | ATGCAT | 2 cut(s) | 247, 2099 |