Rorug05G0147900

ABC transporter G family member

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
13765048 .. 13770182
5135 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0147900.1

Sequence Viewer

Length: 1122 bp
ATGGGCAGGTCCCTGGTCTTCTCTACTAACTTTGCTCTGAGATTTTCTCAAAAACCCAGATCAATTTTACCCCCTAGTTTACCAAGCCACTCTATTTCCCTCAACTCAAGGCAGCAATTGCAACATGGGTCTCAAAGATTTGGACTTTCAATTTCCAAACCAACAAGAACTCTCTGCACCAAAGCTGTGCTATCTGAATTTCCAAATCAGAAGCAGTATGTGAAAGTGGGTGCCCAATCAGTTGGGCCCATCCCAGCTAGTCAGCTCATCGAAGTGGTTGAGAAGGCTGCTAAGACTGGTGCTGAGGTTGTGATGGATGCTGTTAATCAGCCTCGTAATATTACCTATAAGGGACTTACTGACCTGGTTACTGACACAGATAAAAAGAGTGAAGCAGCAATTTTAGAAGTTGTGAAAAAGAACTTTGGAGATCACCTTATTCTTGGAGAGGAGGGTGGAATTATTGGAGATACATCTTCTGACTATCTGTGGTGCATTGATCCATTAGATGGAACGACAAATTTTGCACATGGTTACCCTAGCTTTGCAGTTTCTGTGGGAGTTCTATTTCGAGGAAAACCTGCTGCTGCTGCTGTGGTAGAGTTTGTCGGAGGCCCAATGTGTTGGAATACTCGCATCTTTTCTGCTAGTGCTGGTGGGGGAGCATTTTGTAATGGCCAAAAGATTCACGTGAGTCAAACGGATAAGGTGGAACGATCTCTTCTTGTTACTGGGTTTGGTTATGAACATGATGATCCATGGGCCACGAACATGGAACTATTCAAAGAGTTCACTGACGTCAGCAGGGGTGTCAGAAGGCTCGGTGCTGCTGCAGTAGACATGTGCCATGTAGCTCTTGGGATCGTAGAAGCATACTGGGAATATCGACTAAAGCCATGGGATATGGCTGCTGGTGTTTTGATAGTTGAGGAAGCTGGAGGAGTGGTTACCTGCATGGATGGTGGAAAATTTTGTGTATTTGATAGATCTGTTTTGGTATCCAACGGAGTGCTGCATGCCAAGCTTTTGGAGAGGATTGCACCAGCAACTGAGAAGTTGAAGAGCAAAGAAATTAATTTCTCATTGTGGTATAAGCCTGAAAATTACATGACAGAACTTTGA

Protein Analysis

373

Amino Acids

40.69

Weight (kDa)

7.07

Isoelectric Point (pI)

29.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Inositol_P PF00459 87 - 351 9.1e-78 Inositol monophosphatase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000231)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr0c21g0500361 RchiOBHm_Chr0c31g0501281 RchiOBHm_Chr0c31g0501361 RchiOBHm_Chr1g0366571 RchiOBHm_Chr1g0368811 RchiOBHm_Chr1g0382111 RchiOBHm_Chr2g0121351 RchiOBHm_Chr2g0121651 RchiOBHm_Chr2g0121971 RchiOBHm_Chr2g0122291 RchiOBHm_Chr2g0122411 RchiOBHm_Chr2g0124731 RchiOBHm_Chr2g0124741 RchiOBHm_Chr2g0125141 RchiOBHm_Chr2g0125201 RchiOBHm_Chr2g0125231 RchiOBHm_Chr2g0125321 RchiOBHm_Chr2g0125571 RchiOBHm_Chr2g0125691 RchiOBHm_Chr2g0125971 RchiOBHm_Chr2g0126271 RchiOBHm_Chr2g0126441 RchiOBHm_Chr2g0127451 RchiOBHm_Chr2g0128391 RchiOBHm_Chr2g0128871 RchiOBHm_Chr2g0129451 RchiOBHm_Chr2g0129741 RchiOBHm_Chr2g0129961 RchiOBHm_Chr2g0131161 RchiOBHm_Chr2g0131871 RchiOBHm_Chr2g0132661 RchiOBHm_Chr2g0134171 RchiOBHm_Chr2g0136421 RchiOBHm_Chr2g0137241 RchiOBHm_Chr2g0138031 RchiOBHm_Chr2g0139031 RchiOBHm_Chr2g0139331 RchiOBHm_Chr2g0139341 RchiOBHm_Chr2g0139441 RchiOBHm_Chr2g0141451 RchiOBHm_Chr2g0146701 RchiOBHm_Chr2g0147781 RchiOBHm_Chr2g0148841 RchiOBHm_Chr2g0148961 RchiOBHm_Chr2g0150261 RchiOBHm_Chr2g0152651 RchiOBHm_Chr2g0155711 RchiOBHm_Chr2g0156101 RchiOBHm_Chr2g0156321 RchiOBHm_Chr2g0157801 RchiOBHm_Chr2g0158491 RchiOBHm_Chr2g0161671 RchiOBHm_Chr2g0164891 RchiOBHm_Chr2g0165241 RchiOBHm_Chr2g0165281 RchiOBHm_Chr2g0165811 RchiOBHm_Chr2g0166781 RchiOBHm_Chr2g0168521 RchiOBHm_Chr2g0170181 RchiOBHm_Chr2g0171501 RchiOBHm_Chr2g0171931 RchiOBHm_Chr2g0172151 RchiOBHm_Chr2g0175071 RchiOBHm_Chr2g0176251 RchiOBHm_Chr2g0176731 RchiOBHm_Chr3g0447841 RchiOBHm_Chr3g0453271 RchiOBHm_Chr3g0456381 RchiOBHm_Chr3g0458661 RchiOBHm_Chr3g0458791 RchiOBHm_Chr3g0461201 RchiOBHm_Chr3g0462241 RchiOBHm_Chr3g0464391 RchiOBHm_Chr3g0465591 RchiOBHm_Chr3g0469851 RchiOBHm_Chr3g0470331 RchiOBHm_Chr4g0402011 RchiOBHm_Chr4g0403391 RchiOBHm_Chr4g0436281 RchiOBHm_Chr6g0247471 RchiOBHm_Chr6g0273091 RchiOBHm_Chr7g0180431 RchiOBHm_Chr7g0182691 RchiOBHm_Chr7g0190741 RchiOBHm_Chr7g0193021 RchiOBHm_Chr7g0193851 RchiOBHm_Chr7g0194191 RchiOBHm_Chr7g0195951 RchiOBHm_Chr7g0196551 RchiOBHm_Chr7g0196831 RchiOBHm_Chr7g0198051 RchiOBHm_Chr7g0198071 RchiOBHm_Chr7g0198081 RchiOBHm_Chr7g0199681
rosa_multiflora Rmu_sc0004153.1_g000005 Rmu_sc0005666.1_g000001
rosa_rugosa Rorug01G0001400 Rorug01G0001400 Rorug01G0077900 Rorug01G0082600 Rorug01G0082600 Rorug01G0096200 Rorug01G0096300 Rorug01G0261400 Rorug01G0448400 Rorug02G0114600 Rorug02G0185400 Rorug02G0201900 Rorug02G0253700 Rorug02G0257600 Rorug02G0282800 Rorug02G0298500 Rorug03G0113800 Rorug03G0158300 Rorug03G0215200 Rorug03G0216900 Rorug03G0265300 Rorug03G0288500 Rorug03G0359900.1 Rorug04G0065400 Rorug04G0066200 Rorug04G0069300 Rorug04G0253100 Rorug04G0361900 Rorug04G0419800 Rorug05G0041900 Rorug05G0147900 Rorug05G0257500 Rorug05G0259100 Rorug05G0304100 Rorug05G0340600 Rorug05G0460500 Rorug05G0583400 Rorug06G0050700 Rorug06G0056300 Rorug06G0065300 Rorug06G0083000 Rorug06G0171200 Rorug06G0451100 Rorug07G0168200 Rorug07G0169100 Rorug07G0197000 Rorug07G0302300 RorugPtG0001500.1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 801
Acc36I ACCTGC 2 cut(s) 589, 959
AccB1I GGYRCC 1 cut(s) 230
AccB7I CCANNNNNTGG 1 cut(s) 509
AccI GTMKAC 1 cut(s) 837
AclWI GGATC 3 cut(s) 494, 749, 869
AcoI YGGCCR 1 cut(s) 676
AcsI RAATTY 3 cut(s) 197, 520, 968
AcvI CACGTG 1 cut(s) 691
AcyI GRCGYC 1 cut(s) 798
AfiI CCNNNNNNNGG 1 cut(s) 509
AflIII ACRYGT 1 cut(s) 840
AgsI TTSAA 3 cut(s) 150, 784, 1060
AjnI CCWGG 2 cut(s) 12, 363
AluBI AGCT 7 cut(s) 185, 257, 265, 543, 854, 935, 1024
AluI AGCT 7 cut(s) 185, 257, 265, 543, 854, 935, 1024
Alw26I GTCTC 1 cut(s) 135
AlwI GGATC 3 cut(s) 494, 749, 869
AlwNI CAGNNNCTG 2 cut(s) 554, 1049
AoxI GGCC 4 cut(s) 245, 613, 676, 762
ApaI GGGCCC 1 cut(s) 249
ApoI RAATTY 3 cut(s) 197, 520, 968
AseI ATTAAT 1 cut(s) 1074
AspS9I GGNCC 5 cut(s) 9, 245, 246, 614, 762
AsuHPI GGTGA 1 cut(s) 425
AvaII GGWCC 1 cut(s) 9
BaeGI GKGCMC 2 cut(s) 235, 249
BalI TGGCCA 1 cut(s) 678
BanI GGYRCC 1 cut(s) 230
BanII GRGCYC 1 cut(s) 249
BbrPI CACGTG 1 cut(s) 691
BbsI GAAGAC 1 cut(s) 10
BbvCI CCTCAGC 1 cut(s) 303
BccI CCATC 4 cut(s) 257, 307, 503, 953
BciT130I CCWGG 2 cut(s) 14, 365
BciVI GTATCC 1 cut(s) 1009
BcoDI GTCTC 1 cut(s) 135
BfaI CTAG 4 cut(s) 75, 258, 540, 648
BfmI CTRYAG 1 cut(s) 831
BfuAI ACCTGC 2 cut(s) 589, 959
BfuI GTATCC 1 cut(s) 1009
BglII AGATCT 1 cut(s) 986
Bme1390I CCNGG 2 cut(s) 14, 365
Bme18I GGWCC 1 cut(s) 9
BmgT120I GGNCC 5 cut(s) 9, 245, 246, 614, 762
BmiI GGNNCC 3 cut(s) 11, 232, 247
BmrFI CCNGG 2 cut(s) 14, 365
BmrI ACTGGG 2 cut(s) 741, 886
BmsI GCATC 2 cut(s) 307, 645
BmuI ACTGGG 2 cut(s) 741, 886
BpiI GAAGAC 1 cut(s) 10
BplI GAGNNNNNCTC 2 cut(s) 31, 63
BpmI CTGGAG 1 cut(s) 957
Bpu10I CCTNAGC 1 cut(s) 303
BpuEI CTTGAG 1 cut(s) 91
BsaAI YACGTR 1 cut(s) 691
BsaHI GRCGYC 1 cut(s) 798
BsaI GGTCTC 1 cut(s) 135
BsaJI CCNNGG 3 cut(s) 12, 758, 896
BsaXI ACNNNNNCTCC 2 cut(s) 930, 960
Bsc4I CCNNNNNNNGG 1 cut(s) 509
Bse1I ACTGG 3 cut(s) 301, 736, 881
BseBI CCWGG 2 cut(s) 14, 365
BseDI CCNNGG 3 cut(s) 12, 758, 896
BseGI GGATG 3 cut(s) 249, 322, 964
BseLI CCNNNNNNNGG 1 cut(s) 509
BseMII CTCAG 3 cut(s) 29, 294, 1041
BseNI ACTGG 3 cut(s) 301, 736, 881
BseRI GAGGAG 2 cut(s) 464, 954
BseSI GKGCMC 2 cut(s) 235, 249
BseYI CCCAGC 1 cut(s) 253
BsgI GTGCAG 1 cut(s) 160
BshFI GGCC 4 cut(s) 247, 615, 678, 764
BshNI GGYRCC 1 cut(s) 230
BslFI GGGAC 1 cut(s) 366
BslI CCNNNNNNNGG 1 cut(s) 509
BsmAI GTCTC 1 cut(s) 135
BsmFI GGGAC 1 cut(s) 366
BsnI GGCC 4 cut(s) 247, 615, 678, 764
Bso31I GGTCTC 1 cut(s) 135
Bsp120I GGGCCC 1 cut(s) 245
Bsp1286I GDGCHC 2 cut(s) 235, 249
Bsp143I GATC 7 cut(s) 59, 430, 499, 716, 754, 861, 986
Bsp19I CCATGG 2 cut(s) 758, 896
BspANI GGCC 4 cut(s) 247, 615, 678, 764
BspCNI CTCAG 3 cut(s) 30, 295, 1042
BspLI GGNNCC 3 cut(s) 11, 232, 247
BspMAI CTGCAG 1 cut(s) 835
BspMI ACCTGC 2 cut(s) 589, 959
BspPI GGATC 3 cut(s) 494, 749, 869
BspQI GCTCTTC 1 cut(s) 1055
BspT107I GGYRCC 1 cut(s) 230
BspTNI GGTCTC 1 cut(s) 135
BsrI ACTGG 3 cut(s) 301, 736, 881
BssECI CCNNGG 3 cut(s) 12, 758, 896
BssMI GATC 7 cut(s) 59, 430, 499, 716, 754, 861, 986
BssNI GRCGYC 1 cut(s) 798
BssT1I CCWWGG 2 cut(s) 758, 896
Bst2UI CCWGG 2 cut(s) 14, 365
Bst6I CTCTTC 2 cut(s) 726, 1055
BstACI GRCGYC 1 cut(s) 798
BstAPI GCANNNNNTGC 1 cut(s) 118
BstBAI YACGTR 1 cut(s) 691
BstC8I GCNNGC 1 cut(s) 1017
BstDEI CTNAG 4 cut(s) 38, 291, 303, 1050
BstDSI CCRYGG 2 cut(s) 758, 896
BstEII GGTNACC 2 cut(s) 533, 946
BstF5I GGATG 3 cut(s) 249, 322, 964
BstKTI GATC 7 cut(s) 62, 433, 502, 719, 757, 864, 989
BstMAI GTCTC 1 cut(s) 135
BstMBI GATC 7 cut(s) 59, 430, 499, 716, 754, 861, 986
BstMWI GCNNNNNNNGC 3 cut(s) 118, 590, 1021
BstNI CCWGG 2 cut(s) 14, 365
BstNSI RCATGY 2 cut(s) 844, 1019
BstPI GGTNACC 2 cut(s) 533, 946
BstSCI CCNGG 2 cut(s) 12, 363
BstSFI CTRYAG 1 cut(s) 831
BstSLI GKGCMC 2 cut(s) 235, 249
BstV2I GAAGAC 1 cut(s) 10
BstX2I RGATCY 1 cut(s) 986
BstXI CCANNNNNNTGG 4 cut(s) 242, 624, 772, 1027
BstYI RGATCY 1 cut(s) 986
BsuI GTATCC 1 cut(s) 1009
BsuRI GGCC 4 cut(s) 247, 615, 678, 764
BtgI CCRYGG 2 cut(s) 758, 896
BtsCI GGATG 3 cut(s) 249, 322, 964
BtsIMutI CAGTG 1 cut(s) 792
BveI ACCTGC 2 cut(s) 589, 959
Cac8I GCNNGC 1 cut(s) 1017
CaiI CAGNNNCTG 2 cut(s) 554, 1049
Cfr13I GGNCC 5 cut(s) 9, 245, 246, 614, 762
CsiI ACCWGGT 1 cut(s) 363
DdeI CTNAG 4 cut(s) 38, 291, 303, 1050
DpnI GATC 7 cut(s) 61, 432, 501, 718, 756, 863, 988
DpnII GATC 7 cut(s) 59, 430, 499, 716, 754, 861, 986
EaeI YGGCCR 1 cut(s) 676
Eam1104I CTCTTC 2 cut(s) 726, 1055
EarI CTCTTC 2 cut(s) 726, 1055
Eco130I CCWWGG 2 cut(s) 758, 896
Eco24I GRGCYC 1 cut(s) 249
Eco31I GGTCTC 1 cut(s) 135
Eco47I GGWCC 1 cut(s) 9
Eco72I CACGTG 1 cut(s) 691
Eco91I GGTNACC 2 cut(s) 533, 946
EcoO109I RGGNCCY 1 cut(s) 9
EcoO65I GGTNACC 2 cut(s) 533, 946
EcoRII CCWGG 2 cut(s) 12, 363
EcoT14I CCWWGG 2 cut(s) 758, 896
EcoT38I GRGCYC 1 cut(s) 249
ErhI CCWWGG 2 cut(s) 758, 896
FaqI GGGAC 1 cut(s) 366
FblI GTMKAC 1 cut(s) 837
FokI GGATG 3 cut(s) 236, 329, 971
FriOI GRGCYC 1 cut(s) 249
FspBI CTAG 4 cut(s) 75, 258, 540, 648
GsaI CCCAGC 1 cut(s) 257
GsuI CTGGAG 1 cut(s) 957
HaeIII GGCC 4 cut(s) 247, 615, 678, 764
Hin1I GRCGYC 1 cut(s) 798
HindIII AAGCTT 1 cut(s) 1022
HinfI GANTC 2 cut(s) 685, 694
HphI GGTGA 1 cut(s) 425
Hpy166II GTNNAC 3 cut(s) 80, 792, 838
Hpy188I TCNGA 6 cut(s) 39, 196, 210, 481, 611, 815
Hpy8I GTNNAC 3 cut(s) 80, 792, 838
HpyAV CCTTC 2 cut(s) 277, 810
HpyCH4IV ACGT 2 cut(s) 690, 798
HpyCH4V TGCA 9 cut(s) 121, 177, 495, 527, 548, 833, 954, 1015, 1040
HpyF10VI GCNNNNNNNGC 3 cut(s) 118, 590, 1021
HpyF3I CTNAG 4 cut(s) 38, 291, 303, 1050
HpySE526I ACGT 2 cut(s) 690, 798
Hsp92I GRCGYC 1 cut(s) 798
Kzo9I GATC 7 cut(s) 59, 430, 499, 716, 754, 861, 986
LguI GCTCTTC 1 cut(s) 1055
LmnI GCTCC 1 cut(s) 662
LweI GCATC 2 cut(s) 307, 645
MabI ACCWGGT 1 cut(s) 363
MaeI CTAG 4 cut(s) 75, 258, 540, 648
MaeII ACGT 2 cut(s) 690, 798
MaeIII GTNAC 4 cut(s) 367, 533, 727, 946
MalI GATC 7 cut(s) 61, 432, 501, 718, 756, 863, 988
MboI GATC 7 cut(s) 59, 430, 499, 716, 754, 861, 986
MboII GAAGA 4 cut(s) 10, 468, 713, 1072
MfeI CAATTG 1 cut(s) 116
MflI RGATCY 1 cut(s) 986
MhlI GDGCHC 2 cut(s) 235, 249
MlsI TGGCCA 1 cut(s) 678
MluNI TGGCCA 1 cut(s) 678
MlyI GAGTC 1 cut(s) 703
MmeI TCCRAC 3 cut(s) 589, 605, 1026
Mox20I TGGCCA 1 cut(s) 678
MscI TGGCCA 1 cut(s) 678
MseI TTAA 2 cut(s) 324, 1074
MslI CAYNNNNRTG 2 cut(s) 272, 770
Msp20I TGGCCA 1 cut(s) 678
MspR9I CCNGG 2 cut(s) 14, 365
MunI CAATTG 1 cut(s) 116
MvaI CCWGG 2 cut(s) 14, 365
MwoI GCNNNNNNNGC 3 cut(s) 118, 590, 1021
NcoI CCATGG 2 cut(s) 758, 896
NdeII GATC 7 cut(s) 59, 430, 499, 716, 754, 861, 986
NlaIV GGNNCC 3 cut(s) 11, 232, 247
NspI RCATGY 2 cut(s) 844, 1019
PaeI GCATGC 1 cut(s) 1019
PciI ACATGT 1 cut(s) 840
PciSI GCTCTTC 1 cut(s) 1055
PfeI GAWTC 1 cut(s) 685
PflMI CCANNNNNTGG 1 cut(s) 509
PleI GAGTC 1 cut(s) 702
PmaCI CACGTG 1 cut(s) 691
PmlI CACGTG 1 cut(s) 691
PpsI GAGTC 1 cut(s) 702
Ppu21I YACGTR 1 cut(s) 691
PpuMI RGGWCCY 1 cut(s) 9
PscI ACATGT 1 cut(s) 840
PshBI ATTAAT 1 cut(s) 1074
Psp5II RGGWCCY 1 cut(s) 9
Psp6I CCWGG 2 cut(s) 12, 363
PspCI CACGTG 1 cut(s) 691
PspEI GGTNACC 2 cut(s) 533, 946
PspFI CCCAGC 1 cut(s) 253
PspGI CCWGG 2 cut(s) 12, 363
PspN4I GGNNCC 3 cut(s) 11, 232, 247
PspOMI GGGCCC 1 cut(s) 245
PspPI GGNCC 5 cut(s) 9, 245, 246, 614, 762
PspPPI RGGWCCY 1 cut(s) 9
PstI CTGCAG 1 cut(s) 835
PstNI CAGNNNCTG 2 cut(s) 554, 1049
PsuI RGATCY 1 cut(s) 986
RseI CAYNNNNRTG 2 cut(s) 272, 770
SapI GCTCTTC 1 cut(s) 1055
SaqAI TTAA 2 cut(s) 324, 1074
Sau3AI GATC 7 cut(s) 59, 430, 499, 716, 754, 861, 986
Sau96I GGNCC 5 cut(s) 9, 245, 246, 614, 762
SchI GAGTC 1 cut(s) 703
ScrFI CCNGG 2 cut(s) 14, 365
SduI GDGCHC 2 cut(s) 235, 249
SexAI ACCWGGT 1 cut(s) 363
SfaNI GCATC 2 cut(s) 307, 645
SfcI CTRYAG 1 cut(s) 831
SinI GGWCC 1 cut(s) 9
SmiMI CAYNNNNRTG 2 cut(s) 272, 770
SmlI CTYRAG 1 cut(s) 106
SmoI CTYRAG 1 cut(s) 106
SphI GCATGC 1 cut(s) 1019
SspI AATATT 1 cut(s) 340
SspMI CTAG 4 cut(s) 75, 258, 540, 648
StyD4I CCNGG 2 cut(s) 12, 363
StyI CCWWGG 2 cut(s) 758, 896
TaiI ACGT 2 cut(s) 693, 801
TaqI TCGA 3 cut(s) 270, 571, 886
TfiI GAWTC 1 cut(s) 685
Tru1I TTAA 2 cut(s) 324, 1074
Tru9I TTAA 2 cut(s) 324, 1074
TscAI CASTG 1 cut(s) 799
TspDTI ATGAA 1 cut(s) 759
TspGWI ACGGA 2 cut(s) 716, 1020
TspRI CASTG 1 cut(s) 799
Van91I CCANNNNNTGG 1 cut(s) 509
VpaK11BI GGWCC 1 cut(s) 9
VspI ATTAAT 1 cut(s) 1074
XapI RAATTY 3 cut(s) 197, 520, 968
XceI RCATGY 2 cut(s) 844, 1019
XcmI CCANNNNNNNNNTGG 1 cut(s) 854
XmiI GTMKAC 1 cut(s) 837
XspI CTAG 4 cut(s) 75, 258, 540, 648
ZraI GACGTC 1 cut(s) 799
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.