TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PPDK_N | PF01326 | 19 - 95 | 3.8e-14 | Pyruvate phosphate dikinase, AMP/ATP-binding domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 547 |
| AccII | CGCG | 1 cut(s) | 564 |
| AciI | CCGC | 1 cut(s) | 476 |
| AclWI | GGATC | 1 cut(s) | 399 |
| AcuI | CTGAAG | 2 cut(s) | 97, 207 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 26, 224 |
| AflII | CTTAAG | 1 cut(s) | 304 |
| AgeI | ACCGGT | 1 cut(s) | 367 |
| AgsI | TTSAA | 3 cut(s) | 90, 170, 431 |
| AjiI | CACGTC | 1 cut(s) | 299 |
| AjnI | CCWGG | 2 cut(s) | 25, 292 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 264, 296 |
| AluBI | AGCT | 1 cut(s) | 287 |
| AluI | AGCT | 1 cut(s) | 287 |
| Alw26I | GTCTC | 1 cut(s) | 222 |
| AlwI | GGATC | 1 cut(s) | 399 |
| AoxI | GGCC | 3 cut(s) | 23, 373, 448 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 179, 211 |
| AsiGI | ACCGGT | 1 cut(s) | 367 |
| AspLEI | GCGC | 1 cut(s) | 566 |
| AspS9I | GGNCC | 1 cut(s) | 390 |
| AsuHPI | GGTGA | 3 cut(s) | 41, 50, 431 |
| AvaII | GGWCC | 1 cut(s) | 390 |
| AxyI | CCTNAGG | 1 cut(s) | 342 |
| BccI | CCATC | 3 cut(s) | 42, 226, 518 |
| BciT130I | CCWGG | 2 cut(s) | 27, 294 |
| BcoDI | GTCTC | 1 cut(s) | 222 |
| BfaI | CTAG | 1 cut(s) | 360 |
| BfrI | CTTAAG | 1 cut(s) | 304 |
| BglII | AGATCT | 1 cut(s) | 424 |
| Bme1390I | CCNGG | 2 cut(s) | 27, 294 |
| Bme18I | GGWCC | 1 cut(s) | 390 |
| BmgBI | CACGTC | 1 cut(s) | 299 |
| BmgT120I | GGNCC | 1 cut(s) | 390 |
| BmrFI | CCNGG | 2 cut(s) | 27, 294 |
| BmsI | GCATC | 1 cut(s) | 463 |
| BsaJI | CCNNGG | 2 cut(s) | 20, 249 |
| BsaWI | WCCGGW | 1 cut(s) | 367 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 26, 224 |
| Bse118I | RCCGGY | 1 cut(s) | 367 |
| Bse21I | CCTNAGG | 1 cut(s) | 342 |
| Bse3DI | GCAATG | 1 cut(s) | 555 |
| BseBI | CCWGG | 2 cut(s) | 27, 294 |
| BseDI | CCNNGG | 2 cut(s) | 20, 249 |
| BseGI | GGATG | 1 cut(s) | 478 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 26, 224 |
| BseMI | GCAATG | 1 cut(s) | 555 |
| BseMII | CTCAG | 1 cut(s) | 356 |
| BseRI | GAGGAG | 1 cut(s) | 330 |
| BsgI | GTGCAG | 1 cut(s) | 465 |
| Bsh1236I | CGCG | 1 cut(s) | 564 |
| BshFI | GGCC | 3 cut(s) | 25, 375, 450 |
| BshTI | ACCGGT | 1 cut(s) | 367 |
| BsiSI | CCGG | 1 cut(s) | 368 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 26, 224 |
| BsmAI | GTCTC | 1 cut(s) | 222 |
| BsmI | GAATGC | 2 cut(s) | 21, 194 |
| BsnI | GGCC | 3 cut(s) | 25, 375, 450 |
| Bsp143I | GATC | 2 cut(s) | 404, 424 |
| BspACI | CCGC | 1 cut(s) | 476 |
| BspANI | GGCC | 3 cut(s) | 25, 375, 450 |
| BspCNI | CTCAG | 1 cut(s) | 355 |
| BspFNI | CGCG | 1 cut(s) | 564 |
| BspPI | GGATC | 1 cut(s) | 399 |
| BspTI | CTTAAG | 1 cut(s) | 304 |
| BsrDI | GCAATG | 1 cut(s) | 555 |
| BsrFI | RCCGGY | 1 cut(s) | 367 |
| BssAI | RCCGGY | 1 cut(s) | 367 |
| BssECI | CCNNGG | 2 cut(s) | 20, 249 |
| BssMI | GATC | 2 cut(s) | 404, 424 |
| BssT1I | CCWWGG | 1 cut(s) | 20 |
| Bst2UI | CCWGG | 2 cut(s) | 27, 294 |
| Bst4CI | ACNGT | 2 cut(s) | 390, 461 |
| Bst6I | CTCTTC | 1 cut(s) | 474 |
| BstAFI | CTTAAG | 1 cut(s) | 304 |
| BstC8I | GCNNGC | 2 cut(s) | 448, 562 |
| BstDEI | CTNAG | 2 cut(s) | 277, 342 |
| BstEII | GGTNACC | 1 cut(s) | 353 |
| BstF5I | GGATG | 1 cut(s) | 478 |
| BstFNI | CGCG | 1 cut(s) | 564 |
| BstHHI | GCGC | 1 cut(s) | 566 |
| BstKTI | GATC | 2 cut(s) | 407, 427 |
| BstMAI | GTCTC | 1 cut(s) | 222 |
| BstMBI | GATC | 2 cut(s) | 404, 424 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 65, 191, 561 |
| BstNI | CCWGG | 2 cut(s) | 27, 294 |
| BstPI | GGTNACC | 1 cut(s) | 353 |
| BstSCI | CCNGG | 2 cut(s) | 25, 292 |
| BstUI | CGCG | 1 cut(s) | 564 |
| BstX2I | RGATCY | 1 cut(s) | 424 |
| BstYI | RGATCY | 1 cut(s) | 424 |
| Bsu36I | CCTNAGG | 1 cut(s) | 342 |
| BsuRI | GGCC | 3 cut(s) | 25, 375, 450 |
| BtrI | CACGTC | 1 cut(s) | 299 |
| BtsCI | GGATG | 1 cut(s) | 478 |
| BtsIMutI | CAGTG | 1 cut(s) | 466 |
| Cac8I | GCNNGC | 2 cut(s) | 448, 562 |
| CfoI | GCGC | 1 cut(s) | 566 |
| Cfr10I | RCCGGY | 1 cut(s) | 367 |
| Cfr13I | GGNCC | 1 cut(s) | 390 |
| CspAI | ACCGGT | 1 cut(s) | 367 |
| CviAII | CATG | 4 cut(s) | 60, 140, 154, 567 |
| CviJI | RGCY | 7 cut(s) | 25, 68, 86, 158, 287, 375, 450 |
| CviKI_1 | RGCY | 7 cut(s) | 25, 68, 86, 158, 287, 375, 450 |
| DdeI | CTNAG | 2 cut(s) | 277, 342 |
| DpnI | GATC | 2 cut(s) | 406, 426 |
| DpnII | GATC | 2 cut(s) | 404, 424 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 547 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 547 |
| Eam1104I | CTCTTC | 1 cut(s) | 474 |
| EarI | CTCTTC | 1 cut(s) | 474 |
| Eco130I | CCWWGG | 1 cut(s) | 20 |
| Eco147I | AGGCCT | 1 cut(s) | 450 |
| Eco47I | GGWCC | 1 cut(s) | 390 |
| Eco57I | CTGAAG | 2 cut(s) | 97, 207 |
| Eco81I | CCTNAGG | 1 cut(s) | 342 |
| Eco91I | GGTNACC | 1 cut(s) | 353 |
| EcoO65I | GGTNACC | 1 cut(s) | 353 |
| EcoRII | CCWGG | 2 cut(s) | 25, 292 |
| EcoT14I | CCWWGG | 1 cut(s) | 20 |
| EcoT22I | ATGCAT | 1 cut(s) | 196 |
| ErhI | CCWWGG | 1 cut(s) | 20 |
| FaeI | CATG | 4 cut(s) | 63, 143, 157, 570 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 477, 509 |
| FatI | CATG | 4 cut(s) | 59, 139, 153, 566 |
| FokI | GGATG | 1 cut(s) | 485 |
| FspBI | CTAG | 1 cut(s) | 360 |
| GlaI | GCGC | 1 cut(s) | 565 |
| HaeIII | GGCC | 3 cut(s) | 25, 375, 450 |
| HapII | CCGG | 1 cut(s) | 368 |
| HhaI | GCGC | 1 cut(s) | 566 |
| Hin1II | CATG | 4 cut(s) | 63, 143, 157, 570 |
| Hin6I | GCGC | 1 cut(s) | 564 |
| HinP1I | GCGC | 1 cut(s) | 564 |
| HinfI | GANTC | 3 cut(s) | 230, 335, 410 |
| HpaII | CCGG | 1 cut(s) | 368 |
| HphI | GGTGA | 3 cut(s) | 41, 50, 431 |
| Hpy166II | GTNNAC | 1 cut(s) | 41 |
| Hpy188I | TCNGA | 5 cut(s) | 238, 386, 404, 409, 508 |
| Hpy188III | TCNNGA | 5 cut(s) | 12, 170, 225, 332, 428 |
| Hpy8I | GTNNAC | 1 cut(s) | 41 |
| Hpy99I | CGWCG | 1 cut(s) | 238 |
| HpyAV | CCTTC | 1 cut(s) | 425 |
| HpyCH4III | ACNGT | 2 cut(s) | 390, 461 |
| HpyCH4IV | ACGT | 1 cut(s) | 298 |
| HpyCH4V | TGCA | 4 cut(s) | 4, 153, 194, 446 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 65, 191, 561 |
| HpyF3I | CTNAG | 2 cut(s) | 277, 342 |
| HpySE526I | ACGT | 1 cut(s) | 298 |
| Hsp92II | CATG | 4 cut(s) | 63, 143, 157, 570 |
| HspAI | GCGC | 1 cut(s) | 564 |
| Kzo9I | GATC | 2 cut(s) | 404, 424 |
| LmnI | GCTCC | 1 cut(s) | 284 |
| LweI | GCATC | 1 cut(s) | 463 |
| MaeI | CTAG | 1 cut(s) | 360 |
| MaeII | ACGT | 1 cut(s) | 298 |
| MaeIII | GTNAC | 2 cut(s) | 353, 517 |
| MalI | GATC | 2 cut(s) | 406, 426 |
| MboI | GATC | 2 cut(s) | 404, 424 |
| MboII | GAAGA | 4 cut(s) | 213, 391, 434, 491 |
| MflI | RGATCY | 1 cut(s) | 424 |
| MluCI | AATT | 2 cut(s) | 131, 543 |
| MlyI | GAGTC | 2 cut(s) | 224, 329 |
| MmeI | TCCRAC | 2 cut(s) | 216, 262 |
| MnlI | CCTC | 5 cut(s) | 28, 244, 351, 386, 475 |
| Mph1103I | ATGCAT | 1 cut(s) | 196 |
| MseI | TTAA | 1 cut(s) | 305 |
| MspCI | CTTAAG | 1 cut(s) | 304 |
| MspI | CCGG | 1 cut(s) | 368 |
| MspR9I | CCNGG | 2 cut(s) | 27, 294 |
| Mva1269I | GAATGC | 2 cut(s) | 21, 194 |
| MvaI | CCWGG | 2 cut(s) | 27, 294 |
| MvnI | CGCG | 1 cut(s) | 564 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 65, 191, 561 |
| NdeII | GATC | 2 cut(s) | 404, 424 |
| NlaIII | CATG | 4 cut(s) | 63, 143, 157, 570 |
| NmeAIII | GCCGAG | 1 cut(s) | 274 |
| NsiI | ATGCAT | 1 cut(s) | 196 |
| PceI | AGGCCT | 1 cut(s) | 450 |
| PctI | GAATGC | 2 cut(s) | 21, 194 |
| PfeI | GAWTC | 1 cut(s) | 410 |
| PfoI | TCCNGGA | 1 cut(s) | 292 |
| PinAI | ACCGGT | 1 cut(s) | 367 |
| PleI | GAGTC | 2 cut(s) | 224, 329 |
| PpsI | GAGTC | 2 cut(s) | 224, 329 |
| Psp6I | CCWGG | 2 cut(s) | 25, 292 |
| PspEI | GGTNACC | 1 cut(s) | 353 |
| PspGI | CCWGG | 2 cut(s) | 25, 292 |
| PspPI | GGNCC | 1 cut(s) | 390 |
| PsuI | RGATCY | 1 cut(s) | 424 |
| SaqAI | TTAA | 1 cut(s) | 305 |
| Sau3AI | GATC | 2 cut(s) | 404, 424 |
| Sau96I | GGNCC | 1 cut(s) | 390 |
| SchI | GAGTC | 2 cut(s) | 224, 329 |
| ScrFI | CCNGG | 2 cut(s) | 27, 294 |
| SetI | ASST | 9 cut(s) | 81, 255, 265, 278, 289, 301, 348, 355, 436 |
| SfaNI | GCATC | 1 cut(s) | 463 |
| SinI | GGWCC | 1 cut(s) | 390 |
| SmlI | CTYRAG | 1 cut(s) | 304 |
| SmoI | CTYRAG | 1 cut(s) | 304 |
| Sse9I | AATT | 2 cut(s) | 131, 543 |
| SseBI | AGGCCT | 1 cut(s) | 450 |
| SsiI | CCGC | 1 cut(s) | 476 |
| SspMI | CTAG | 1 cut(s) | 360 |
| StuI | AGGCCT | 1 cut(s) | 450 |
| StyD4I | CCNGG | 2 cut(s) | 25, 292 |
| StyI | CCWWGG | 1 cut(s) | 20 |
| TaaI | ACNGT | 2 cut(s) | 390, 461 |
| TaiI | ACGT | 1 cut(s) | 301 |
| TasI | AATT | 2 cut(s) | 131, 543 |
| TfiI | GAWTC | 1 cut(s) | 410 |
| Tru1I | TTAA | 1 cut(s) | 305 |
| Tru9I | TTAA | 1 cut(s) | 305 |
| TscAI | CASTG | 1 cut(s) | 466 |
| TspRI | CASTG | 1 cut(s) | 466 |
| Vha464I | CTTAAG | 1 cut(s) | 304 |
| VpaK11BI | GGWCC | 1 cut(s) | 390 |
| XspI | CTAG | 1 cut(s) | 360 |
| Zsp2I | ATGCAT | 1 cut(s) | 196 |