Disease resistance protein (TIR-NBS-LRR class)
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1187 |
| AarI | CACCTGC | 1 cut(s) | 1345 |
| AatII | GACGTC | 1 cut(s) | 1782 |
| Acc36I | ACCTGC | 1 cut(s) | 1345 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1705 |
| AccI | GTMKAC | 1 cut(s) | 2143 |
| AccII | CGCG | 1 cut(s) | 266 |
| AccIII | TCCGGA | 1 cut(s) | 1618 |
| AciI | CCGC | 5 cut(s) | 266, 372, 781, 1084, 1268 |
| AclWI | GGATC | 4 cut(s) | 179, 1690, 1859, 1872 |
| AcoI | YGGCCR | 2 cut(s) | 609, 1243 |
| AcsI | RAATTY | 3 cut(s) | 792, 1395, 1635 |
| AcuI | CTGAAG | 3 cut(s) | 795, 1280, 1758 |
| AcyI | GRCGYC | 1 cut(s) | 1779 |
| AdeI | CACNNNGTG | 2 cut(s) | 447, 1693 |
| AfaI | GTAC | 7 cut(s) | 961, 1330, 1496, 1735, 1821, 2015, 2117 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1625, 1705, 2138 |
| AflII | CTTAAG | 1 cut(s) | 1894 |
| AflIII | ACRYGT | 3 cut(s) | 493, 529, 1322 |
| AhlI | ACTAGT | 1 cut(s) | 1225 |
| AjiI | CACGTC | 1 cut(s) | 1117 |
| AjnI | CCWGG | 4 cut(s) | 1168, 1744, 2048, 2082 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 782, 814, 956, 988, 1146, 1178 |
| AleI | CACNNNNGTG | 1 cut(s) | 1770 |
| AluBI | AGCT | 9 cut(s) | 626, 773, 971, 1040, 1241, 1300, 1601, 1874, 2038 |
| AluI | AGCT | 9 cut(s) | 626, 773, 971, 1040, 1241, 1300, 1601, 1874, 2038 |
| Alw26I | GTCTC | 5 cut(s) | 351, 551, 1296, 1656, 2059 |
| AlwI | GGATC | 4 cut(s) | 179, 1690, 1859, 1872 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1444 |
| Ama87I | CYCGRG | 1 cut(s) | 1194 |
| Aor13HI | TCCGGA | 1 cut(s) | 1618 |
| AoxI | GGCC | 4 cut(s) | 609, 1165, 1243, 2080 |
| ApeKI | GCWGC | 6 cut(s) | 21, 302, 638, 968, 1370, 1601 |
| ApoI | RAATTY | 3 cut(s) | 792, 1395, 1635 |
| AseI | ATTAAT | 1 cut(s) | 119 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 329, 519, 825 |
| AspLEI | GCGC | 3 cut(s) | 266, 537, 1354 |
| AspS9I | GGNCC | 3 cut(s) | 143, 368, 1166 |
| AsuC2I | CCSGG | 1 cut(s) | 1724 |
| AsuHPI | GGTGA | 3 cut(s) | 97, 1163, 1784 |
| AvaI | CYCGRG | 1 cut(s) | 1194 |
| AvaII | GGWCC | 2 cut(s) | 143, 368 |
| BalI | TGGCCA | 2 cut(s) | 611, 1245 |
| BamHI | GGATCC | 1 cut(s) | 1864 |
| BbsI | GAAGAC | 2 cut(s) | 783, 1223 |
| BbvI | GCAGC | 6 cut(s) | 33, 289, 650, 980, 1357, 1588 |
| BccI | CCATC | 4 cut(s) | 300, 532, 1505, 2014 |
| BceAI | ACGGC | 1 cut(s) | 1071 |
| BciT130I | CCWGG | 4 cut(s) | 1170, 1746, 2050, 2084 |
| BciVI | GTATCC | 1 cut(s) | 262 |
| BclI | TGATCA | 1 cut(s) | 411 |
| BcnI | CCSGG | 1 cut(s) | 1724 |
| BcoDI | GTCTC | 5 cut(s) | 351, 551, 1296, 1656, 2059 |
| BcuI | ACTAGT | 1 cut(s) | 1225 |
| BfaI | CTAG | 3 cut(s) | 1022, 1226, 1943 |
| BfmI | CTRYAG | 3 cut(s) | 840, 1056, 1371 |
| BfrI | CTTAAG | 1 cut(s) | 1894 |
| BfuAI | ACCTGC | 1 cut(s) | 1345 |
| BfuI | GTATCC | 1 cut(s) | 262 |
| BglII | AGATCT | 1 cut(s) | 134 |
| BisI | GCNGC | 6 cut(s) | 22, 303, 639, 969, 1371, 1602 |
| BlsI | GCNGC | 6 cut(s) | 23, 304, 640, 970, 1372, 1603 |
| BmcAI | AGTACT | 1 cut(s) | 2015 |
| Bme1390I | CCNGG | 5 cut(s) | 1170, 1724, 1746, 2050, 2084 |
| Bme18I | GGWCC | 2 cut(s) | 143, 368 |
| BmeT110I | CYCGRG | 1 cut(s) | 1194 |
| BmgBI | CACGTC | 1 cut(s) | 1117 |
| BmgT120I | GGNCC | 3 cut(s) | 143, 368, 1166 |
| BmiI | GGNNCC | 4 cut(s) | 145, 370, 1082, 1866 |
| BmrFI | CCNGG | 5 cut(s) | 1170, 1724, 1746, 2050, 2084 |
| BmsI | GCATC | 6 cut(s) | 25, 877, 1573, 1674, 1875, 1948 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1782 |
| BpiI | GAAGAC | 2 cut(s) | 783, 1223 |
| BpmI | CTGGAG | 3 cut(s) | 151, 368, 2071 |
| BpuEI | CTTGAG | 2 cut(s) | 1854, 2045 |
| BpuMI | CCSGG | 1 cut(s) | 1724 |
| BsaAI | YACGTR | 1 cut(s) | 959 |
| BsaHI | GRCGYC | 1 cut(s) | 1779 |
| BsaJI | CCNNGG | 3 cut(s) | 147, 1168, 2048 |
| BsaWI | WCCGGW | 1 cut(s) | 1618 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 348, 378 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1625, 1705, 2138 |
| Bse1I | ACTGG | 4 cut(s) | 351, 477, 763, 1208 |
| BseAI | TCCGGA | 1 cut(s) | 1618 |
| BseBI | CCWGG | 4 cut(s) | 1170, 1746, 2050, 2084 |
| BseDI | CCNNGG | 3 cut(s) | 147, 1168, 2048 |
| BseGI | GGATG | 6 cut(s) | 219, 460, 688, 813, 1689, 1890 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1625, 1705, 2138 |
| BseNI | ACTGG | 4 cut(s) | 351, 477, 763, 1208 |
| BseRI | GAGGAG | 1 cut(s) | 190 |
| BseXI | GCAGC | 6 cut(s) | 33, 289, 650, 980, 1357, 1588 |
| Bsh1236I | CGCG | 1 cut(s) | 266 |
| BshFI | GGCC | 4 cut(s) | 611, 1167, 1245, 2082 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1194 |
| BsiSI | CCGG | 4 cut(s) | 18, 599, 1619, 1723 |
| BslFI | GGGAC | 2 cut(s) | 129, 1040 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1625, 1705, 2138 |
| BsmAI | GTCTC | 5 cut(s) | 351, 551, 1296, 1656, 2059 |
| BsmBI | CGTCTC | 1 cut(s) | 351 |
| BsmFI | GGGAC | 2 cut(s) | 129, 1040 |
| BsmI | GAATGC | 1 cut(s) | 482 |
| BsnI | GGCC | 4 cut(s) | 611, 1167, 1245, 2082 |
| BsoBI | CYCGRG | 1 cut(s) | 1194 |
| Bsp13I | TCCGGA | 1 cut(s) | 1618 |
| Bsp1407I | TGTACA | 2 cut(s) | 1328, 1494 |
| BspACI | CCGC | 5 cut(s) | 266, 372, 781, 1084, 1268 |
| BspANI | GGCC | 4 cut(s) | 611, 1167, 1245, 2082 |
| BspEI | TCCGGA | 1 cut(s) | 1618 |
| BspFNI | CGCG | 1 cut(s) | 266 |
| BspLI | GGNNCC | 4 cut(s) | 145, 370, 1082, 1866 |
| BspMAI | CTGCAG | 1 cut(s) | 1375 |
| BspMI | ACCTGC | 1 cut(s) | 1345 |
| BspPI | GGATC | 4 cut(s) | 179, 1690, 1859, 1872 |
| BspQI | GCTCTTC | 2 cut(s) | 1307, 1734 |
| BspTI | CTTAAG | 1 cut(s) | 1894 |
| BsrGI | TGTACA | 2 cut(s) | 1328, 1494 |
| BsrI | ACTGG | 4 cut(s) | 351, 477, 763, 1208 |
| BssECI | CCNNGG | 3 cut(s) | 147, 1168, 2048 |
| BssNI | GRCGYC | 1 cut(s) | 1779 |
| BssT1I | CCWWGG | 1 cut(s) | 147 |
| Bst2UI | CCWGG | 4 cut(s) | 1170, 1746, 2050, 2084 |
| Bst4CI | ACNGT | 5 cut(s) | 315, 676, 929, 987, 1446 |
| Bst6I | CTCTTC | 4 cut(s) | 913, 1299, 1307, 1734 |
| BstACI | GRCGYC | 1 cut(s) | 1779 |
| BstAFI | CTTAAG | 1 cut(s) | 1894 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1367 |
| BstAUI | TGTACA | 2 cut(s) | 1328, 1494 |
| BstBAI | YACGTR | 1 cut(s) | 959 |
| BstC8I | GCNNGC | 5 cut(s) | 157, 882, 1243, 1318, 2111 |
| BstDEI | CTNAG | 3 cut(s) | 251, 1910, 2163 |
| BstF5I | GGATG | 6 cut(s) | 219, 460, 688, 813, 1689, 1890 |
| BstFNI | CGCG | 1 cut(s) | 266 |
| BstHHI | GCGC | 3 cut(s) | 266, 537, 1354 |
| BstMAI | GTCTC | 5 cut(s) | 351, 551, 1296, 1656, 2059 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 183, 1358, 1367, 1833, 2044, 2088 |
| BstNI | CCWGG | 4 cut(s) | 1170, 1746, 2050, 2084 |
| BstNSI | RCATGY | 3 cut(s) | 497, 533, 1557 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1782 |
| BstSCI | CCNGG | 5 cut(s) | 1168, 1722, 1744, 2048, 2082 |
| BstSFI | CTRYAG | 3 cut(s) | 840, 1056, 1371 |
| BstUI | CGCG | 1 cut(s) | 266 |
| BstV1I | GCAGC | 6 cut(s) | 33, 289, 650, 980, 1357, 1588 |
| BstV2I | GAAGAC | 2 cut(s) | 783, 1223 |
| BstX2I | RGATCY | 3 cut(s) | 134, 171, 1864 |
| BstYI | RGATCY | 3 cut(s) | 134, 171, 1864 |
| BsuI | GTATCC | 1 cut(s) | 262 |
| BsuRI | GGCC | 4 cut(s) | 611, 1167, 1245, 2082 |
| BtrI | CACGTC | 1 cut(s) | 1117 |
| BtsCI | GGATG | 6 cut(s) | 219, 460, 688, 813, 1689, 1890 |
| BtsIMutI | CAGTG | 2 cut(s) | 925, 1641 |
| BveI | ACCTGC | 1 cut(s) | 1345 |
| Cac8I | GCNNGC | 5 cut(s) | 157, 882, 1243, 1318, 2111 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1444 |
| CfoI | GCGC | 3 cut(s) | 266, 537, 1354 |
| Cfr13I | GGNCC | 3 cut(s) | 143, 368, 1166 |
| CseI | GACGC | 1 cut(s) | 929 |
| Csp6I | GTAC | 7 cut(s) | 960, 1329, 1495, 1734, 1820, 2014, 2116 |
| CviQI | GTAC | 7 cut(s) | 960, 1329, 1495, 1734, 1820, 2014, 2116 |
| DdeI | CTNAG | 3 cut(s) | 251, 1910, 2163 |
| DraIII | CACNNNGTG | 2 cut(s) | 447, 1693 |
| EaeI | YGGCCR | 2 cut(s) | 609, 1243 |
| Eam1104I | CTCTTC | 4 cut(s) | 913, 1299, 1307, 1734 |
| EarI | CTCTTC | 4 cut(s) | 913, 1299, 1307, 1734 |
| EciI | GGCGGA | 2 cut(s) | 1073, 1283 |
| Eco130I | CCWWGG | 1 cut(s) | 147 |
| Eco47I | GGWCC | 2 cut(s) | 143, 368 |
| Eco57I | CTGAAG | 3 cut(s) | 795, 1280, 1758 |
| Eco88I | CYCGRG | 1 cut(s) | 1194 |
| EcoRII | CCWGG | 4 cut(s) | 1168, 1744, 2048, 2082 |
| EcoT14I | CCWWGG | 1 cut(s) | 147 |
| EcoT22I | ATGCAT | 1 cut(s) | 1890 |
| ErhI | CCWWGG | 1 cut(s) | 147 |
| Esp3I | CGTCTC | 1 cut(s) | 351 |
| FaqI | GGGAC | 2 cut(s) | 129, 1040 |
| FauI | CCCGC | 1 cut(s) | 379 |
| FauNDI | CATATG | 2 cut(s) | 1679, 2043 |
| FbaI | TGATCA | 1 cut(s) | 411 |
| FblI | GTMKAC | 1 cut(s) | 2143 |
| Fnu4HI | GCNGC | 6 cut(s) | 22, 303, 639, 969, 1371, 1602 |
| FokI | GGATG | 6 cut(s) | 206, 467, 695, 800, 1696, 1897 |
| Fsp4HI | GCNGC | 6 cut(s) | 22, 303, 639, 969, 1371, 1602 |
| FspBI | CTAG | 3 cut(s) | 1022, 1226, 1943 |
| GlaI | GCGC | 3 cut(s) | 265, 536, 1353 |
| GluI | GCNGC | 6 cut(s) | 22, 303, 639, 969, 1371, 1602 |
| GsuI | CTGGAG | 3 cut(s) | 151, 368, 2071 |
| HaeIII | GGCC | 4 cut(s) | 611, 1167, 1245, 2082 |
| HapII | CCGG | 4 cut(s) | 18, 599, 1619, 1723 |
| HgaI | GACGC | 1 cut(s) | 929 |
| HhaI | GCGC | 3 cut(s) | 266, 537, 1354 |
| Hin1I | GRCGYC | 1 cut(s) | 1779 |
| Hin6I | GCGC | 3 cut(s) | 264, 535, 1352 |
| HinP1I | GCGC | 3 cut(s) | 264, 535, 1352 |
| HincII | GTYRAC | 3 cut(s) | 1069, 1849, 2144 |
| HindII | GTYRAC | 3 cut(s) | 1069, 1849, 2144 |
| HindIII | AAGCTT | 2 cut(s) | 624, 1872 |
| HpaII | CCGG | 4 cut(s) | 18, 599, 1619, 1723 |
| HphI | GGTGA | 3 cut(s) | 97, 1163, 1784 |
| Hpy166II | GTNNAC | 4 cut(s) | 1069, 1495, 1849, 2144 |
| Hpy188I | TCNGA | 4 cut(s) | 260, 548, 691, 713 |
| Hpy8I | GTNNAC | 4 cut(s) | 1069, 1495, 1849, 2144 |
| Hpy99I | CGWCG | 2 cut(s) | 923, 1118 |
| HpyCH4III | ACNGT | 5 cut(s) | 315, 676, 929, 987, 1446 |
| HpyCH4IV | ACGT | 4 cut(s) | 958, 1116, 1324, 1779 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 183, 1358, 1367, 1833, 2044, 2088 |
| HpyF3I | CTNAG | 3 cut(s) | 251, 1910, 2163 |
| HpySE526I | ACGT | 4 cut(s) | 958, 1116, 1324, 1779 |
| Hsp92I | GRCGYC | 1 cut(s) | 1779 |
| HspAI | GCGC | 3 cut(s) | 264, 535, 1352 |
| Kpn2I | TCCGGA | 1 cut(s) | 1618 |
| Ksp22I | TGATCA | 1 cut(s) | 411 |
| LguI | GCTCTTC | 2 cut(s) | 1307, 1734 |
| LmnI | GCTCC | 3 cut(s) | 770, 1086, 2052 |
| Lsp1109I | GCAGC | 6 cut(s) | 33, 289, 650, 980, 1357, 1588 |
| LweI | GCATC | 6 cut(s) | 25, 877, 1573, 1674, 1875, 1948 |
| MaeI | CTAG | 3 cut(s) | 1022, 1226, 1943 |
| MaeII | ACGT | 4 cut(s) | 958, 1116, 1324, 1779 |
| MaeIII | GTNAC | 2 cut(s) | 69, 1985 |
| MfeI | CAATTG | 1 cut(s) | 1672 |
| MflI | RGATCY | 3 cut(s) | 134, 171, 1864 |
| MlsI | TGGCCA | 2 cut(s) | 611, 1245 |
| MluNI | TGGCCA | 2 cut(s) | 611, 1245 |
| MlyI | GAGTC | 4 cut(s) | 120, 897, 1213, 1298 |
| MmeI | TCCRAC | 2 cut(s) | 346, 1842 |
| MnlI | CCTC | 9 cut(s) | 19, 35, 208, 211, 254, 1071, 1264, 1768, 1878 |
| Mox20I | TGGCCA | 2 cut(s) | 611, 1245 |
| Mph1103I | ATGCAT | 1 cut(s) | 1890 |
| MroI | TCCGGA | 1 cut(s) | 1618 |
| MroXI | GAANNNNTTC | 3 cut(s) | 329, 519, 825 |
| MscI | TGGCCA | 2 cut(s) | 611, 1245 |
| MslI | CAYNNNNRTG | 8 cut(s) | 1311, 1646, 1682, 1770, 1856, 1883, 1926, 2134 |
| Msp20I | TGGCCA | 2 cut(s) | 611, 1245 |
| MspCI | CTTAAG | 1 cut(s) | 1894 |
| MspI | CCGG | 4 cut(s) | 18, 599, 1619, 1723 |
| MspR9I | CCNGG | 5 cut(s) | 1170, 1724, 1746, 2050, 2084 |
| MunI | CAATTG | 1 cut(s) | 1672 |
| Mva1269I | GAATGC | 1 cut(s) | 482 |
| MvaI | CCWGG | 4 cut(s) | 1170, 1746, 2050, 2084 |
| MvnI | CGCG | 1 cut(s) | 266 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 183, 1358, 1367, 1833, 2044, 2088 |
| NciI | CCSGG | 1 cut(s) | 1724 |
| NdeI | CATATG | 2 cut(s) | 1679, 2043 |
| NlaIV | GGNNCC | 4 cut(s) | 145, 370, 1082, 1866 |
| NsiI | ATGCAT | 1 cut(s) | 1890 |
| NspI | RCATGY | 3 cut(s) | 497, 533, 1557 |
| OliI | CACNNNNGTG | 1 cut(s) | 1770 |
| PaeR7I | CTCGAG | 1 cut(s) | 1194 |
| PaqCI | CACCTGC | 1 cut(s) | 1345 |
| PciI | ACATGT | 2 cut(s) | 493, 529 |
| PciSI | GCTCTTC | 2 cut(s) | 1307, 1734 |
| PctI | GAATGC | 1 cut(s) | 482 |
| PdmI | GAANNNNTTC | 3 cut(s) | 329, 519, 825 |
| PfeI | GAWTC | 7 cut(s) | 395, 659, 686, 733, 740, 1124, 1899 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1705 |
| PfoI | TCCNGGA | 1 cut(s) | 1722 |
| PkrI | GCNGC | 6 cut(s) | 23, 304, 640, 970, 1372, 1603 |
| PleI | GAGTC | 4 cut(s) | 120, 897, 1213, 1297 |
| PpsI | GAGTC | 4 cut(s) | 120, 897, 1213, 1297 |
| Ppu21I | YACGTR | 1 cut(s) | 959 |
| PscI | ACATGT | 2 cut(s) | 493, 529 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1782 |
| PshBI | ATTAAT | 1 cut(s) | 119 |
| PsiI | TTATAA | 1 cut(s) | 1187 |
| Psp6I | CCWGG | 4 cut(s) | 1168, 1744, 2048, 2082 |
| PspGI | CCWGG | 4 cut(s) | 1168, 1744, 2048, 2082 |
| PspN4I | GGNNCC | 4 cut(s) | 145, 370, 1082, 1866 |
| PspPI | GGNCC | 3 cut(s) | 143, 368, 1166 |
| PstI | CTGCAG | 1 cut(s) | 1375 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1444 |
| PsuI | RGATCY | 3 cut(s) | 134, 171, 1864 |
| RsaI | GTAC | 7 cut(s) | 961, 1330, 1496, 1735, 1821, 2015, 2117 |
| RsaNI | GTAC | 7 cut(s) | 960, 1329, 1495, 1734, 1820, 2014, 2116 |
| RseI | CAYNNNNRTG | 8 cut(s) | 1311, 1646, 1682, 1770, 1856, 1883, 1926, 2134 |
| SalI | GTCGAC | 1 cut(s) | 2142 |
| SapI | GCTCTTC | 2 cut(s) | 1307, 1734 |
| SatI | GCNGC | 6 cut(s) | 22, 303, 639, 969, 1371, 1602 |
| Sau96I | GGNCC | 3 cut(s) | 143, 368, 1166 |
| ScaI | AGTACT | 1 cut(s) | 2015 |
| SchI | GAGTC | 4 cut(s) | 120, 897, 1213, 1298 |
| ScrFI | CCNGG | 5 cut(s) | 1170, 1724, 1746, 2050, 2084 |
| SfaNI | GCATC | 6 cut(s) | 25, 877, 1573, 1674, 1875, 1948 |
| SfcI | CTRYAG | 3 cut(s) | 840, 1056, 1371 |
| Sfr274I | CTCGAG | 1 cut(s) | 1194 |
| SinI | GGWCC | 2 cut(s) | 143, 368 |
| SlaI | CTCGAG | 1 cut(s) | 1194 |
| SmiMI | CAYNNNNRTG | 8 cut(s) | 1311, 1646, 1682, 1770, 1856, 1883, 1926, 2134 |
| SmlI | CTYRAG | 4 cut(s) | 1194, 1869, 1894, 2060 |
| SmoI | CTYRAG | 4 cut(s) | 1194, 1869, 1894, 2060 |
| SpeI | ACTAGT | 1 cut(s) | 1225 |
| SsiI | CCGC | 5 cut(s) | 266, 372, 781, 1084, 1268 |
| SspI | AATATT | 1 cut(s) | 519 |
| SspMI | CTAG | 3 cut(s) | 1022, 1226, 1943 |
| StyD4I | CCNGG | 5 cut(s) | 1168, 1722, 1744, 2048, 2082 |
| StyI | CCWWGG | 1 cut(s) | 147 |
| TaaI | ACNGT | 5 cut(s) | 315, 676, 929, 987, 1446 |
| TaiI | ACGT | 4 cut(s) | 961, 1119, 1327, 1782 |
| TaqI | TCGA | 4 cut(s) | 101, 918, 1195, 2143 |
| TatI | WGTACW | 6 cut(s) | 1328, 1494, 1733, 1819, 2013, 2115 |
| TfiI | GAWTC | 7 cut(s) | 395, 659, 686, 733, 740, 1124, 1899 |
| TscAI | CASTG | 2 cut(s) | 932, 1648 |
| TseI | GCWGC | 6 cut(s) | 21, 302, 638, 968, 1370, 1601 |
| TspDTI | ATGAA | 7 cut(s) | 322, 471, 591, 1017, 1395, 2030, 2086 |
| TspGWI | ACGGA | 1 cut(s) | 357 |
| TspRI | CASTG | 2 cut(s) | 932, 1648 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1705 |
| Vha464I | CTTAAG | 1 cut(s) | 1894 |
| VpaK11BI | GGWCC | 2 cut(s) | 143, 368 |
| VspI | ATTAAT | 1 cut(s) | 119 |
| XapI | RAATTY | 3 cut(s) | 792, 1395, 1635 |
| XbaI | TCTAGA | 1 cut(s) | 1942 |
| XceI | RCATGY | 3 cut(s) | 497, 533, 1557 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 448 |
| XhoI | CTCGAG | 1 cut(s) | 1194 |
| XmiI | GTMKAC | 1 cut(s) | 2143 |
| XmnI | GAANNNNTTC | 3 cut(s) | 329, 519, 825 |
| XspI | CTAG | 3 cut(s) | 1022, 1226, 1943 |
| ZraI | GACGTC | 1 cut(s) | 1780 |
| ZrmI | AGTACT | 1 cut(s) | 2015 |
| Zsp2I | ATGCAT | 1 cut(s) | 1890 |