TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 156 |
| Acc36I | ACCTGC | 1 cut(s) | 193 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 944 |
| AciI | CCGC | 1 cut(s) | 88 |
| AclWI | GGATC | 2 cut(s) | 332, 498 |
| AcoI | YGGCCR | 1 cut(s) | 953 |
| AcsI | RAATTY | 2 cut(s) | 656, 737 |
| AcuI | CTGAAG | 1 cut(s) | 702 |
| AcvI | CACGTG | 1 cut(s) | 258 |
| AfaI | GTAC | 1 cut(s) | 53 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 849, 944 |
| AflIII | ACRYGT | 1 cut(s) | 257 |
| AgeI | ACCGGT | 1 cut(s) | 856 |
| AjnI | CCWGG | 1 cut(s) | 519 |
| AluBI | AGCT | 2 cut(s) | 217, 271 |
| AluI | AGCT | 2 cut(s) | 217, 271 |
| AlwI | GGATC | 2 cut(s) | 332, 498 |
| Ama87I | CYCGRG | 1 cut(s) | 905 |
| AoxI | GGCC | 3 cut(s) | 517, 645, 953 |
| ApeKI | GCWGC | 8 cut(s) | 26, 29, 116, 431, 822, 825, 839, 933 |
| ApoI | RAATTY | 2 cut(s) | 656, 737 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 729, 761 |
| AsiGI | ACCGGT | 1 cut(s) | 856 |
| AspS9I | GGNCC | 2 cut(s) | 182, 517 |
| AsuHPI | GGTGA | 1 cut(s) | 235 |
| AvaI | CYCGRG | 1 cut(s) | 905 |
| AvaII | GGWCC | 1 cut(s) | 182 |
| BauI | CACGAG | 1 cut(s) | 576 |
| BbrPI | CACGTG | 1 cut(s) | 258 |
| BbvI | GCAGC | 8 cut(s) | 13, 16, 103, 443, 834, 837, 851, 920 |
| BccI | CCATC | 3 cut(s) | 114, 349, 796 |
| BceAI | ACGGC | 2 cut(s) | 346, 972 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 567, 601 |
| BciT130I | CCWGG | 1 cut(s) | 521 |
| BclI | TGATCA | 1 cut(s) | 225 |
| BfuAI | ACCTGC | 1 cut(s) | 193 |
| BisI | GCNGC | 8 cut(s) | 27, 30, 117, 432, 823, 826, 840, 934 |
| BlsI | GCNGC | 8 cut(s) | 28, 31, 118, 433, 824, 827, 841, 935 |
| Bme1390I | CCNGG | 1 cut(s) | 521 |
| Bme18I | GGWCC | 1 cut(s) | 182 |
| BmeT110I | CYCGRG | 1 cut(s) | 905 |
| BmgT120I | GGNCC | 2 cut(s) | 182, 517 |
| BmiI | GGNNCC | 1 cut(s) | 759 |
| BmrFI | CCNGG | 1 cut(s) | 521 |
| BmrI | ACTGGG | 2 cut(s) | 293, 677 |
| BmsI | GCATC | 4 cut(s) | 278, 342, 406, 718 |
| BmuI | ACTGGG | 2 cut(s) | 293, 677 |
| BpmI | CTGGAG | 1 cut(s) | 461 |
| BpuEI | CTTGAG | 1 cut(s) | 182 |
| Bsa29I | ATCGAT | 1 cut(s) | 336 |
| BsaAI | YACGTR | 1 cut(s) | 258 |
| BsaJI | CCNNGG | 3 cut(s) | 834, 871, 943 |
| BsaWI | WCCGGW | 1 cut(s) | 856 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 960, 990 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 849, 944 |
| Bse118I | RCCGGY | 2 cut(s) | 856, 929 |
| Bse1I | ACTGG | 3 cut(s) | 288, 672, 956 |
| Bse3DI | GCAATG | 1 cut(s) | 916 |
| BseBI | CCWGG | 1 cut(s) | 521 |
| BseCI | ATCGAT | 1 cut(s) | 336 |
| BseDI | CCNNGG | 3 cut(s) | 834, 871, 943 |
| BseGI | GGATG | 3 cut(s) | 293, 421, 807 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 849, 944 |
| BseMI | GCAATG | 1 cut(s) | 916 |
| BseMII | CTCAG | 1 cut(s) | 656 |
| BseNI | ACTGG | 3 cut(s) | 288, 672, 956 |
| BseRI | GAGGAG | 2 cut(s) | 379, 424 |
| BseXI | GCAGC | 8 cut(s) | 13, 16, 103, 443, 834, 837, 851, 920 |
| BseYI | CCCAGC | 1 cut(s) | 921 |
| Bsh1285I | CGRYCG | 3 cut(s) | 857, 861, 952 |
| BshFI | GGCC | 3 cut(s) | 519, 647, 955 |
| BshTI | ACCGGT | 1 cut(s) | 856 |
| BshVI | ATCGAT | 1 cut(s) | 336 |
| BsiEI | CGRYCG | 3 cut(s) | 857, 861, 952 |
| BsiHKCI | CYCGRG | 1 cut(s) | 905 |
| BsiSI | CCGG | 2 cut(s) | 857, 930 |
| BslFI | GGGAC | 1 cut(s) | 652 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 849, 944 |
| BsmFI | GGGAC | 1 cut(s) | 652 |
| BsnI | GGCC | 3 cut(s) | 519, 647, 955 |
| BsoBI | CYCGRG | 1 cut(s) | 905 |
| Bsp143I | GATC | 5 cut(s) | 225, 321, 337, 490, 949 |
| BspACI | CCGC | 1 cut(s) | 88 |
| BspANI | GGCC | 3 cut(s) | 519, 647, 955 |
| BspCNI | CTCAG | 1 cut(s) | 655 |
| BspDI | ATCGAT | 1 cut(s) | 336 |
| BspLI | GGNNCC | 1 cut(s) | 759 |
| BspMI | ACCTGC | 1 cut(s) | 193 |
| BspPI | GGATC | 2 cut(s) | 332, 498 |
| BsrDI | GCAATG | 1 cut(s) | 916 |
| BsrFI | RCCGGY | 2 cut(s) | 856, 929 |
| BsrI | ACTGG | 3 cut(s) | 288, 672, 956 |
| BssAI | RCCGGY | 2 cut(s) | 856, 929 |
| BssECI | CCNNGG | 3 cut(s) | 834, 871, 943 |
| BssMI | GATC | 5 cut(s) | 225, 321, 337, 490, 949 |
| BssSI | CACGAG | 1 cut(s) | 576 |
| BssT1I | CCWWGG | 3 cut(s) | 834, 871, 943 |
| Bst2BI | CACGAG | 1 cut(s) | 576 |
| Bst2UI | CCWGG | 1 cut(s) | 521 |
| Bst4CI | ACNGT | 1 cut(s) | 223 |
| Bst6I | CTCTTC | 1 cut(s) | 45 |
| BstBAI | YACGTR | 1 cut(s) | 258 |
| BstC8I | GCNNGC | 2 cut(s) | 608, 886 |
| BstDEI | CTNAG | 2 cut(s) | 65, 642 |
| BstF5I | GGATG | 3 cut(s) | 293, 421, 807 |
| BstKTI | GATC | 5 cut(s) | 228, 324, 340, 493, 952 |
| BstMBI | GATC | 5 cut(s) | 225, 321, 337, 490, 949 |
| BstMCI | CGRYCG | 3 cut(s) | 857, 861, 952 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 728 |
| BstNI | CCWGG | 1 cut(s) | 521 |
| BstNSI | RCATGY | 1 cut(s) | 610 |
| BstSCI | CCNGG | 1 cut(s) | 519 |
| BstV1I | GCAGC | 8 cut(s) | 13, 16, 103, 443, 834, 837, 851, 920 |
| Bsu15I | ATCGAT | 1 cut(s) | 336 |
| BsuRI | GGCC | 3 cut(s) | 519, 647, 955 |
| BsuTUI | ATCGAT | 1 cut(s) | 336 |
| BtsCI | GGATG | 3 cut(s) | 293, 421, 807 |
| BtsIMutI | CAGTG | 1 cut(s) | 79 |
| BveI | ACCTGC | 1 cut(s) | 193 |
| Cac8I | GCNNGC | 2 cut(s) | 608, 886 |
| Cfr10I | RCCGGY | 2 cut(s) | 856, 929 |
| Cfr13I | GGNCC | 2 cut(s) | 182, 517 |
| ClaI | ATCGAT | 1 cut(s) | 336 |
| Csp6I | GTAC | 1 cut(s) | 52 |
| CspAI | ACCGGT | 1 cut(s) | 856 |
| CviAII | CATG | 6 cut(s) | 113, 292, 504, 607, 725, 748 |
| CviQI | GTAC | 1 cut(s) | 52 |
| DdeI | CTNAG | 2 cut(s) | 65, 642 |
| DpnI | GATC | 5 cut(s) | 227, 323, 339, 492, 951 |
| DpnII | GATC | 5 cut(s) | 225, 321, 337, 490, 949 |
| EaeI | YGGCCR | 1 cut(s) | 953 |
| Eam1104I | CTCTTC | 1 cut(s) | 45 |
| EarI | CTCTTC | 1 cut(s) | 45 |
| Eco130I | CCWWGG | 3 cut(s) | 834, 871, 943 |
| Eco147I | AGGCCT | 1 cut(s) | 647 |
| Eco47I | GGWCC | 1 cut(s) | 182 |
| Eco57I | CTGAAG | 1 cut(s) | 702 |
| Eco72I | CACGTG | 1 cut(s) | 258 |
| Eco88I | CYCGRG | 1 cut(s) | 905 |
| EcoO109I | RGGNCCY | 1 cut(s) | 517 |
| EcoRI | GAATTC | 1 cut(s) | 656 |
| EcoRII | CCWGG | 1 cut(s) | 519 |
| EcoT14I | CCWWGG | 3 cut(s) | 834, 871, 943 |
| EcoT22I | ATGCAT | 1 cut(s) | 293 |
| ErhI | CCWWGG | 3 cut(s) | 834, 871, 943 |
| FaeI | CATG | 6 cut(s) | 116, 295, 507, 610, 728, 751 |
| FaqI | GGGAC | 1 cut(s) | 652 |
| FatI | CATG | 6 cut(s) | 112, 291, 503, 606, 724, 747 |
| FauI | CCCGC | 1 cut(s) | 95 |
| FbaI | TGATCA | 1 cut(s) | 225 |
| Fnu4HI | GCNGC | 8 cut(s) | 27, 30, 117, 432, 823, 826, 840, 934 |
| FokI | GGATG | 3 cut(s) | 300, 428, 814 |
| Fsp4HI | GCNGC | 8 cut(s) | 27, 30, 117, 432, 823, 826, 840, 934 |
| GluI | GCNGC | 8 cut(s) | 27, 30, 117, 432, 823, 826, 840, 934 |
| GsaI | CCCAGC | 1 cut(s) | 925 |
| GsuI | CTGGAG | 1 cut(s) | 461 |
| HaeIII | GGCC | 3 cut(s) | 519, 647, 955 |
| HapII | CCGG | 2 cut(s) | 857, 930 |
| Hin1II | CATG | 6 cut(s) | 116, 295, 507, 610, 728, 751 |
| HincII | GTYRAC | 1 cut(s) | 82 |
| HindII | GTYRAC | 1 cut(s) | 82 |
| HindIII | AAGCTT | 1 cut(s) | 215 |
| HinfI | GANTC | 5 cut(s) | 554, 572, 640, 677, 908 |
| HpaII | CCGG | 2 cut(s) | 857, 930 |
| HphI | GGTGA | 1 cut(s) | 235 |
| Hpy166II | GTNNAC | 1 cut(s) | 82 |
| Hpy188I | TCNGA | 6 cut(s) | 129, 346, 495, 682, 754, 897 |
| Hpy188III | TCNNGA | 7 cut(s) | 44, 194, 235, 406, 440, 576, 905 |
| Hpy8I | GTNNAC | 1 cut(s) | 82 |
| HpyAV | CCTTC | 3 cut(s) | 200, 682, 873 |
| HpyCH4III | ACNGT | 1 cut(s) | 223 |
| HpyCH4IV | ACGT | 1 cut(s) | 257 |
| HpyCH4V | TGCA | 4 cut(s) | 277, 291, 374, 567 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 728 |
| HpyF3I | CTNAG | 2 cut(s) | 65, 642 |
| HpySE526I | ACGT | 1 cut(s) | 257 |
| Hsp92II | CATG | 6 cut(s) | 116, 295, 507, 610, 728, 751 |
| Ksp22I | TGATCA | 1 cut(s) | 225 |
| Kzo9I | GATC | 5 cut(s) | 225, 321, 337, 490, 949 |
| LmnI | GCTCC | 1 cut(s) | 981 |
| Lsp1109I | GCAGC | 8 cut(s) | 13, 16, 103, 443, 834, 837, 851, 920 |
| LweI | GCATC | 4 cut(s) | 278, 342, 406, 718 |
| MaeII | ACGT | 1 cut(s) | 257 |
| MaeIII | GTNAC | 2 cut(s) | 139, 671 |
| MalI | GATC | 5 cut(s) | 227, 323, 339, 492, 951 |
| MboI | GATC | 5 cut(s) | 225, 321, 337, 490, 949 |
| MboII | GAAGA | 9 cut(s) | 32, 101, 142, 243, 250, 407, 785, 794, 828 |
| MluCI | AATT | 9 cut(s) | 135, 177, 485, 509, 528, 540, 549, 656, 737 |
| MlyI | GAGTC | 2 cut(s) | 634, 917 |
| MmeI | TCCRAC | 2 cut(s) | 505, 732 |
| Mph1103I | ATGCAT | 1 cut(s) | 293 |
| MseI | TTAA | 2 cut(s) | 479, 512 |
| MslI | CAYNNNNRTG | 1 cut(s) | 111 |
| MspI | CCGG | 2 cut(s) | 857, 930 |
| MspR9I | CCNGG | 1 cut(s) | 521 |
| MvaI | CCWGG | 1 cut(s) | 521 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 728 |
| NdeII | GATC | 5 cut(s) | 225, 321, 337, 490, 949 |
| NlaIII | CATG | 6 cut(s) | 116, 295, 507, 610, 728, 751 |
| NlaIV | GGNNCC | 1 cut(s) | 759 |
| NmuCI | GTSAC | 1 cut(s) | 139 |
| NsiI | ATGCAT | 1 cut(s) | 293 |
| NspI | RCATGY | 1 cut(s) | 610 |
| PaeI | GCATGC | 1 cut(s) | 610 |
| PceI | AGGCCT | 1 cut(s) | 647 |
| PfeI | GAWTC | 3 cut(s) | 554, 572, 677 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 944 |
| PinAI | ACCGGT | 1 cut(s) | 856 |
| PkrI | GCNGC | 8 cut(s) | 28, 31, 118, 433, 824, 827, 841, 935 |
| Ple19I | CGATCG | 1 cut(s) | 952 |
| PleI | GAGTC | 2 cut(s) | 634, 916 |
| PmaCI | CACGTG | 1 cut(s) | 258 |
| PmlI | CACGTG | 1 cut(s) | 258 |
| PpsI | GAGTC | 2 cut(s) | 634, 916 |
| Ppu21I | YACGTR | 1 cut(s) | 258 |
| PsiI | TTATAA | 1 cut(s) | 156 |
| Psp6I | CCWGG | 1 cut(s) | 519 |
| PspCI | CACGTG | 1 cut(s) | 258 |
| PspFI | CCCAGC | 1 cut(s) | 921 |
| PspGI | CCWGG | 1 cut(s) | 519 |
| PspN4I | GGNNCC | 1 cut(s) | 759 |
| PspPI | GGNCC | 2 cut(s) | 182, 517 |
| PvuI | CGATCG | 1 cut(s) | 952 |
| RsaI | GTAC | 1 cut(s) | 53 |
| RsaNI | GTAC | 1 cut(s) | 52 |
| RseI | CAYNNNNRTG | 1 cut(s) | 111 |
| SaqAI | TTAA | 2 cut(s) | 479, 512 |
| SatI | GCNGC | 8 cut(s) | 27, 30, 117, 432, 823, 826, 840, 934 |
| Sau3AI | GATC | 5 cut(s) | 225, 321, 337, 490, 949 |
| Sau96I | GGNCC | 2 cut(s) | 182, 517 |
| SchI | GAGTC | 2 cut(s) | 634, 917 |
| ScrFI | CCNGG | 1 cut(s) | 521 |
| SfaNI | GCATC | 4 cut(s) | 278, 342, 406, 718 |
| SinI | GGWCC | 1 cut(s) | 182 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 111 |
| SmlI | CTYRAG | 1 cut(s) | 161 |
| SmoI | CTYRAG | 1 cut(s) | 161 |
| SphI | GCATGC | 1 cut(s) | 610 |
| Sse9I | AATT | 9 cut(s) | 135, 177, 485, 509, 528, 540, 549, 656, 737 |
| SseBI | AGGCCT | 1 cut(s) | 647 |
| SsiI | CCGC | 1 cut(s) | 88 |
| StuI | AGGCCT | 1 cut(s) | 647 |
| StyD4I | CCNGG | 1 cut(s) | 519 |
| StyI | CCWWGG | 3 cut(s) | 834, 871, 943 |
| TaaI | ACNGT | 1 cut(s) | 223 |
| TaiI | ACGT | 1 cut(s) | 260 |
| TaqI | TCGA | 4 cut(s) | 204, 236, 336, 861 |
| TasI | AATT | 9 cut(s) | 135, 177, 485, 509, 528, 540, 549, 656, 737 |
| TfiI | GAWTC | 3 cut(s) | 554, 572, 677 |
| Tru1I | TTAA | 2 cut(s) | 479, 512 |
| Tru9I | TTAA | 2 cut(s) | 479, 512 |
| TscAI | CASTG | 1 cut(s) | 79 |
| TseFI | GTSAC | 1 cut(s) | 139 |
| TseI | GCWGC | 8 cut(s) | 26, 29, 116, 431, 822, 825, 839, 933 |
| Tsp45I | GTSAC | 1 cut(s) | 139 |
| TspDTI | ATGAA | 1 cut(s) | 101 |
| TspRI | CASTG | 1 cut(s) | 79 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 944 |
| VpaK11BI | GGWCC | 1 cut(s) | 182 |
| XapI | RAATTY | 2 cut(s) | 656, 737 |
| XceI | RCATGY | 1 cut(s) | 610 |
| Zsp2I | ATGCAT | 1 cut(s) | 293 |