Disease resistance protein (TIR-NBS-LRR class)
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 902 |
| AarI | CACCTGC | 1 cut(s) | 1054 |
| Acc36I | ACCTGC | 1 cut(s) | 1054 |
| Acc65I | GGTACC | 1 cut(s) | 683 |
| AccB1I | GGYRCC | 2 cut(s) | 683, 792 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2018 |
| AccBSI | CCGCTC | 1 cut(s) | 2701 |
| AccI | GTMKAC | 2 cut(s) | 280, 1944 |
| AccII | CGCG | 2 cut(s) | 77, 3614 |
| AccIII | TCCGGA | 3 cut(s) | 1324, 1924, 2361 |
| AclI | AACGTT | 1 cut(s) | 2950 |
| AclWI | GGATC | 6 cut(s) | 1568, 1581, 1826, 2684, 2820, 3034 |
| AcoI | YGGCCR | 4 cut(s) | 333, 3477, 3525, 3615 |
| AcuI | CTGAAG | 3 cut(s) | 519, 989, 1175 |
| AcvI | CACGTG | 1 cut(s) | 3253 |
| AdeI | CACNNNGTG | 1 cut(s) | 1399 |
| AfaI | GTAC | 7 cut(s) | 685, 802, 1202, 1441, 1527, 1906, 3218 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 1331, 2018, 3486, 3624 |
| AflIII | ACRYGT | 1 cut(s) | 3252 |
| AhlI | ACTAGT | 2 cut(s) | 940, 3449 |
| AjnI | CCWGG | 3 cut(s) | 883, 1842, 1998 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 506, 538 |
| AleI | CACNNNNGTG | 1 cut(s) | 2755 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 855, 887 |
| Alw21I | GWGCWC | 1 cut(s) | 2724 |
| AlwI | GGATC | 6 cut(s) | 1568, 1581, 1826, 2684, 2820, 3034 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1150, 2792 |
| Ama87I | CYCGRG | 4 cut(s) | 909, 1450, 2531, 3140 |
| Aor13HI | TCCGGA | 3 cut(s) | 1324, 1924, 2361 |
| ApeKI | GCWGC | 6 cut(s) | 113, 362, 1079, 1307, 2428, 3569 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2791, 2823 |
| Asp700I | GAANNNNTTC | 7 cut(s) | 140, 1002, 1188, 2052, 2220, 2571, 3429 |
| Asp718I | GGTACC | 1 cut(s) | 683 |
| AspLEI | GCGC | 2 cut(s) | 77, 1461 |
| AspS9I | GGNCC | 8 cut(s) | 179, 841, 881, 1125, 1840, 2835, 2842, 3222 |
| AsuC2I | CCSGG | 6 cut(s) | 1451, 1452, 1668, 2985, 3141, 3142 |
| AsuHPI | GGTGA | 1 cut(s) | 1288 |
| AsuII | TTCGAA | 1 cut(s) | 642 |
| AvaI | CYCGRG | 4 cut(s) | 909, 1450, 2531, 3140 |
| AvaII | GGWCC | 6 cut(s) | 179, 841, 1125, 1840, 2835, 3222 |
| BaeGI | GKGCMC | 1 cut(s) | 2335 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 784, 817, 2166, 2199 |
| BalI | TGGCCA | 1 cut(s) | 335 |
| BamHI | GGATCC | 1 cut(s) | 1573 |
| BanI | GGYRCC | 2 cut(s) | 683, 792 |
| BanII | GRGCYC | 2 cut(s) | 2460, 2673 |
| BbrPI | CACGTG | 1 cut(s) | 3253 |
| BbsI | GAAGAC | 5 cut(s) | 507, 549, 2723, 2745, 3297 |
| Bbv12I | GWGCWC | 1 cut(s) | 2724 |
| BbvI | GCAGC | 6 cut(s) | 100, 374, 1066, 1294, 2415, 3556 |
| BccI | CCATC | 7 cut(s) | 111, 1211, 1325, 1726, 2146, 2206, 2660 |
| BceAI | ACGGC | 4 cut(s) | 2416, 3252, 3261, 3492 |
| BciT130I | CCWGG | 3 cut(s) | 885, 1844, 2000 |
| BciVI | GTATCC | 1 cut(s) | 73 |
| BclI | TGATCA | 1 cut(s) | 222 |
| BcnI | CCSGG | 6 cut(s) | 1451, 1452, 1668, 2985, 3141, 3142 |
| BcuI | ACTAGT | 2 cut(s) | 940, 3449 |
| BfaI | CTAG | 8 cut(s) | 941, 2564, 2687, 2735, 3450, 3464, 3497, 3587 |
| BfmI | CTRYAG | 6 cut(s) | 564, 768, 1038, 1080, 2178, 2245 |
| BfuAI | ACCTGC | 1 cut(s) | 1054 |
| BfuI | GTATCC | 1 cut(s) | 73 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 3476, 3533 |
| BglII | AGATCT | 3 cut(s) | 1960, 2029, 3127 |
| BmcAI | AGTACT | 1 cut(s) | 1441 |
| Bme1390I | CCNGG | 9 cut(s) | 885, 1451, 1452, 1668, 1844, 2000, 2985, 3141, 3142 |
| Bme18I | GGWCC | 6 cut(s) | 179, 841, 1125, 1840, 2835, 3222 |
| BmeT110I | CYCGRG | 4 cut(s) | 909, 1450, 2531, 3140 |
| BmgT120I | GGNCC | 8 cut(s) | 179, 841, 881, 1125, 1840, 2835, 2842, 3222 |
| BmiI | GGNNCC | 5 cut(s) | 181, 685, 794, 1575, 3469 |
| BmrFI | CCNGG | 9 cut(s) | 885, 1451, 1452, 1668, 1844, 2000, 2985, 3141, 3142 |
| BmsI | GCATC | 6 cut(s) | 601, 1380, 1584, 1642, 3400, 3755 |
| BpiI | GAAGAC | 5 cut(s) | 507, 549, 2723, 2745, 3297 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2525, 2557 |
| BpmI | CTGGAG | 2 cut(s) | 179, 1716 |
| Bpu14I | TTCGAA | 1 cut(s) | 642 |
| BpuEI | CTTGAG | 8 cut(s) | 454, 1563, 1624, 1757, 1783, 2444, 2657, 2789 |
| BpuMI | CCSGG | 6 cut(s) | 1451, 1452, 1668, 2985, 3141, 3142 |
| Bsa29I | ATCGAT | 2 cut(s) | 1350, 1821 |
| BsaAI | YACGTR | 1 cut(s) | 3253 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1959, 3132 |
| BsaI | GGTCTC | 1 cut(s) | 2630 |
| BsaJI | CCNNGG | 9 cut(s) | 883, 1450, 1836, 2276, 2838, 3140, 3394, 3474, 3612 |
| BsaWI | WCCGGW | 4 cut(s) | 1324, 1924, 2361, 3219 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 159, 189, 855, 885, 1139, 1169, 2629, 2659 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 1331, 2018, 3486, 3624 |
| Bse1I | ACTGG | 7 cut(s) | 162, 288, 487, 923, 2717, 3672, 3725 |
| Bse3DI | GCAATG | 1 cut(s) | 2600 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1959, 3132 |
| BseAI | TCCGGA | 3 cut(s) | 1324, 1924, 2361 |
| BseBI | CCWGG | 3 cut(s) | 885, 1844, 2000 |
| BseCI | ATCGAT | 2 cut(s) | 1350, 1821 |
| BseDI | CCNNGG | 9 cut(s) | 883, 1450, 1836, 2276, 2838, 3140, 3394, 3474, 3612 |
| BseJI | GATNNNNATC | 2 cut(s) | 1959, 3132 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 1331, 2018, 3486, 3624 |
| BseMI | GCAATG | 1 cut(s) | 2600 |
| BseMII | CTCAG | 1 cut(s) | 76 |
| BseNI | ACTGG | 7 cut(s) | 162, 288, 487, 923, 2717, 3672, 3725 |
| BseRI | GAGGAG | 1 cut(s) | 180 |
| BseSI | GKGCMC | 1 cut(s) | 2335 |
| BseX3I | CGGCCG | 3 cut(s) | 3477, 3525, 3615 |
| BseXI | GCAGC | 6 cut(s) | 100, 374, 1066, 1294, 2415, 3556 |
| BsgI | GTGCAG | 3 cut(s) | 2064, 2467, 2778 |
| Bsh1236I | CGCG | 2 cut(s) | 77, 3614 |
| Bsh1285I | CGRYCG | 3 cut(s) | 3480, 3528, 3618 |
| BshNI | GGYRCC | 2 cut(s) | 683, 792 |
| BshVI | ATCGAT | 2 cut(s) | 1350, 1821 |
| BsiEI | CGRYCG | 3 cut(s) | 3480, 3528, 3618 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2724 |
| BsiHKCI | CYCGRG | 4 cut(s) | 909, 1450, 2531, 3140 |
| BsiSI | CCGG | 9 cut(s) | 861, 1325, 1451, 1668, 1925, 2362, 2984, 3141, 3220 |
| BslFI | GGGAC | 4 cut(s) | 752, 2329, 2425, 3216 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 1331, 2018, 3486, 3624 |
| BsmFI | GGGAC | 4 cut(s) | 752, 2329, 2425, 3216 |
| BsmI | GAATGC | 2 cut(s) | 293, 1086 |
| Bso31I | GGTCTC | 1 cut(s) | 2630 |
| BsoBI | CYCGRG | 4 cut(s) | 909, 1450, 2531, 3140 |
| Bsp119I | TTCGAA | 1 cut(s) | 642 |
| Bsp1286I | GDGCHC | 4 cut(s) | 2335, 2460, 2673, 2724 |
| Bsp13I | TCCGGA | 3 cut(s) | 1324, 1924, 2361 |
| Bsp1407I | TGTACA | 2 cut(s) | 1200, 1904 |
| Bsp19I | CCATGG | 1 cut(s) | 2276 |
| BspCNI | CTCAG | 1 cut(s) | 75 |
| BspDI | ATCGAT | 2 cut(s) | 1350, 1821 |
| BspEI | TCCGGA | 3 cut(s) | 1324, 1924, 2361 |
| BspFNI | CGCG | 2 cut(s) | 77, 3614 |
| BspLI | GGNNCC | 5 cut(s) | 181, 685, 794, 1575, 3469 |
| BspMAI | CTGCAG | 2 cut(s) | 1084, 2182 |
| BspMI | ACCTGC | 1 cut(s) | 1054 |
| BspPI | GGATC | 6 cut(s) | 1568, 1581, 1826, 2684, 2820, 3034 |
| BspQI | GCTCTTC | 2 cut(s) | 1016, 2418 |
| BspT104I | TTCGAA | 1 cut(s) | 642 |
| BspT107I | GGYRCC | 2 cut(s) | 683, 792 |
| BspTNI | GGTCTC | 1 cut(s) | 2630 |
| BsrBI | CCGCTC | 1 cut(s) | 2701 |
| BsrDI | GCAATG | 1 cut(s) | 2600 |
| BsrGI | TGTACA | 2 cut(s) | 1200, 1904 |
| BsrI | ACTGG | 7 cut(s) | 162, 288, 487, 923, 2717, 3672, 3725 |
| BssECI | CCNNGG | 9 cut(s) | 883, 1450, 1836, 2276, 2838, 3140, 3394, 3474, 3612 |
| BssNAI | GTATAC | 2 cut(s) | 281, 1945 |
| BssT1I | CCWWGG | 3 cut(s) | 1836, 2276, 3394 |
| Bst1107I | GTATAC | 2 cut(s) | 281, 1945 |
| Bst2UI | CCWGG | 3 cut(s) | 885, 1844, 2000 |
| Bst4CI | ACNGT | 8 cut(s) | 126, 653, 1475, 2246, 3176, 3193, 3351, 3715 |
| Bst6I | CTCTTC | 5 cut(s) | 637, 1008, 1016, 2342, 2418 |
| BstAUI | TGTACA | 2 cut(s) | 1200, 1904 |
| BstBAI | YACGTR | 1 cut(s) | 3253 |
| BstBI | TTCGAA | 1 cut(s) | 642 |
| BstC8I | GCNNGC | 4 cut(s) | 367, 606, 1084, 2699 |
| BstDEI | CTNAG | 6 cut(s) | 62, 1803, 1826, 2161, 2611, 3538 |
| BstDSI | CCRYGG | 3 cut(s) | 2276, 3474, 3612 |
| BstFNI | CGCG | 2 cut(s) | 77, 3614 |
| BstHHI | GCGC | 2 cut(s) | 77, 1461 |
| BstMCI | CGRYCG | 3 cut(s) | 3480, 3528, 3618 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 251, 1539, 1756, 2589, 3052, 3102, 3476, 3479, 3533 |
| BstNI | CCWGG | 3 cut(s) | 885, 1844, 2000 |
| BstNSI | RCATGY | 1 cut(s) | 1263 |
| BstSCI | CCNGG | 9 cut(s) | 883, 1449, 1450, 1666, 1842, 1998, 2983, 3139, 3140 |
| BstSFI | CTRYAG | 6 cut(s) | 564, 768, 1038, 1080, 2178, 2245 |
| BstSLI | GKGCMC | 1 cut(s) | 2335 |
| BstUI | CGCG | 2 cut(s) | 77, 3614 |
| BstV1I | GCAGC | 6 cut(s) | 100, 374, 1066, 1294, 2415, 3556 |
| BstV2I | GAAGAC | 5 cut(s) | 507, 549, 2723, 2745, 3297 |
| BstX2I | RGATCY | 6 cut(s) | 1573, 1960, 2029, 2689, 3026, 3127 |
| BstYI | RGATCY | 6 cut(s) | 1573, 1960, 2029, 2689, 3026, 3127 |
| BstZ17I | GTATAC | 2 cut(s) | 281, 1945 |
| BstZI | CGGCCG | 3 cut(s) | 3477, 3525, 3615 |
| Bsu15I | ATCGAT | 2 cut(s) | 1350, 1821 |
| BsuI | GTATCC | 1 cut(s) | 73 |
| BsuTUI | ATCGAT | 2 cut(s) | 1350, 1821 |
| BtgI | CCRYGG | 3 cut(s) | 2276, 3474, 3612 |
| BtsI | GCAGTG | 1 cut(s) | 3519 |
| BtsIMutI | CAGTG | 6 cut(s) | 649, 1480, 2724, 2793, 3181, 3519 |
| BveI | ACCTGC | 1 cut(s) | 1054 |
| Cac8I | GCNNGC | 4 cut(s) | 367, 606, 1084, 2699 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1150, 2792 |
| CciNI | GCGGCCGC | 2 cut(s) | 3525, 3615 |
| CfoI | GCGC | 2 cut(s) | 77, 1461 |
| Cfr13I | GGNCC | 8 cut(s) | 179, 841, 881, 1125, 1840, 2835, 2842, 3222 |
| Cfr42I | CCGCGG | 1 cut(s) | 3615 |
| Cfr9I | CCCGGG | 2 cut(s) | 1450, 3140 |
| ClaI | ATCGAT | 2 cut(s) | 1350, 1821 |
| CpoI | CGGWCCG | 1 cut(s) | 3222 |
| Csp6I | GTAC | 7 cut(s) | 684, 801, 1201, 1440, 1526, 1905, 3217 |
| CspI | CGGWCCG | 1 cut(s) | 3222 |
| CviQI | GTAC | 7 cut(s) | 684, 801, 1201, 1440, 1526, 1905, 3217 |
| DdeI | CTNAG | 6 cut(s) | 62, 1803, 1826, 2161, 2611, 3538 |
| DraI | TTTAAA | 1 cut(s) | 2523 |
| DraIII | CACNNNGTG | 1 cut(s) | 1399 |
| EaeI | YGGCCR | 4 cut(s) | 333, 3477, 3525, 3615 |
| EagI | CGGCCG | 3 cut(s) | 3477, 3525, 3615 |
| Eam1104I | CTCTTC | 5 cut(s) | 637, 1008, 1016, 2342, 2418 |
| EarI | CTCTTC | 5 cut(s) | 637, 1008, 1016, 2342, 2418 |
| EciI | GGCGGA | 1 cut(s) | 1418 |
| EclXI | CGGCCG | 3 cut(s) | 3477, 3525, 3615 |
| Eco130I | CCWWGG | 3 cut(s) | 1836, 2276, 3394 |
| Eco24I | GRGCYC | 2 cut(s) | 2460, 2673 |
| Eco31I | GGTCTC | 1 cut(s) | 2630 |
| Eco47I | GGWCC | 6 cut(s) | 179, 841, 1125, 1840, 2835, 3222 |
| Eco52I | CGGCCG | 3 cut(s) | 3477, 3525, 3615 |
| Eco57I | CTGAAG | 3 cut(s) | 519, 989, 1175 |
| Eco72I | CACGTG | 1 cut(s) | 3253 |
| Eco88I | CYCGRG | 4 cut(s) | 909, 1450, 2531, 3140 |
| EcoRI | GAATTC | 1 cut(s) | 1341 |
| EcoRII | CCWGG | 3 cut(s) | 883, 1842, 1998 |
| EcoT14I | CCWWGG | 3 cut(s) | 1836, 2276, 3394 |
| EcoT22I | ATGCAT | 4 cut(s) | 293, 1535, 1599, 1635 |
| EcoT38I | GRGCYC | 2 cut(s) | 2460, 2673 |
| ErhI | CCWWGG | 3 cut(s) | 1836, 2276, 3394 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 3663, 3695 |
| FaqI | GGGAC | 4 cut(s) | 752, 2329, 2425, 3216 |
| FauI | CCCGC | 1 cut(s) | 190 |
| FauNDI | CATATG | 4 cut(s) | 1385, 1629, 1755, 2959 |
| FbaI | TGATCA | 1 cut(s) | 222 |
| FblI | GTMKAC | 2 cut(s) | 280, 1944 |
| FriOI | GRGCYC | 2 cut(s) | 2460, 2673 |
| FspBI | CTAG | 8 cut(s) | 941, 2564, 2687, 2735, 3450, 3464, 3497, 3587 |
| GlaI | GCGC | 2 cut(s) | 76, 1460 |
| GsuI | CTGGAG | 2 cut(s) | 179, 1716 |
| HapII | CCGG | 9 cut(s) | 861, 1325, 1451, 1668, 1925, 2362, 2984, 3141, 3220 |
| HhaI | GCGC | 2 cut(s) | 77, 1461 |
| Hin6I | GCGC | 2 cut(s) | 75, 1459 |
| HinP1I | GCGC | 2 cut(s) | 75, 1459 |
| HincII | GTYRAC | 1 cut(s) | 3718 |
| HindII | GTYRAC | 1 cut(s) | 3718 |
| HindIII | AAGCTT | 5 cut(s) | 348, 1581, 2087, 2590, 3044 |
| HpaII | CCGG | 9 cut(s) | 861, 1325, 1451, 1668, 1925, 2362, 2984, 3141, 3220 |
| HphI | GGTGA | 1 cut(s) | 1288 |
| Hpy99I | CGWCG | 1 cut(s) | 3238 |
| HpyAV | CCTTC | 6 cut(s) | 151, 197, 337, 1130, 1685, 2073 |
| HpyCH4III | ACNGT | 8 cut(s) | 126, 653, 1475, 2246, 3176, 3193, 3351, 3715 |
| HpyCH4IV | ACGT | 2 cut(s) | 2950, 3252 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 251, 1539, 1756, 2589, 3052, 3102, 3476, 3479, 3533 |
| HpyF3I | CTNAG | 6 cut(s) | 62, 1803, 1826, 2161, 2611, 3538 |
| HpySE526I | ACGT | 2 cut(s) | 2950, 3252 |
| HspAI | GCGC | 2 cut(s) | 75, 1459 |
| Kpn2I | TCCGGA | 3 cut(s) | 1324, 1924, 2361 |
| KpnI | GGTACC | 1 cut(s) | 687 |
| Ksp22I | TGATCA | 1 cut(s) | 222 |
| KspI | CCGCGG | 1 cut(s) | 3615 |
| LguI | GCTCTTC | 2 cut(s) | 1016, 2418 |
| LmnI | GCTCC | 6 cut(s) | 424, 494, 1147, 2373, 2727, 3467 |
| Lsp1109I | GCAGC | 6 cut(s) | 100, 374, 1066, 1294, 2415, 3556 |
| LweI | GCATC | 6 cut(s) | 601, 1380, 1584, 1642, 3400, 3755 |
| MaeI | CTAG | 8 cut(s) | 941, 2564, 2687, 2735, 3450, 3464, 3497, 3587 |
| MaeII | ACGT | 2 cut(s) | 2950, 3252 |
| MaeIII | GTNAC | 7 cut(s) | 1829, 2139, 2240, 2788, 2888, 3445, 3655 |
| MbiI | CCGCTC | 1 cut(s) | 2701 |
| MflI | RGATCY | 6 cut(s) | 1573, 1960, 2029, 2689, 3026, 3127 |
| MhlI | GDGCHC | 4 cut(s) | 2335, 2460, 2673, 2724 |
| MlsI | TGGCCA | 1 cut(s) | 335 |
| MluNI | TGGCCA | 1 cut(s) | 335 |
| MlyI | GAGTC | 6 cut(s) | 621, 769, 928, 2017, 3224, 3384 |
| MmeI | TCCRAC | 4 cut(s) | 157, 788, 1551, 1834 |
| Mox20I | TGGCCA | 1 cut(s) | 335 |
| Mph1103I | ATGCAT | 4 cut(s) | 293, 1535, 1599, 1635 |
| MroI | TCCGGA | 3 cut(s) | 1324, 1924, 2361 |
| MroXI | GAANNNNTTC | 7 cut(s) | 140, 1002, 1188, 2052, 2220, 2571, 3429 |
| MscI | TGGCCA | 1 cut(s) | 335 |
| MslI | CAYNNNNRTG | 6 cut(s) | 1352, 1388, 1476, 1592, 1638, 2755 |
| Msp20I | TGGCCA | 1 cut(s) | 335 |
| MspA1I | CMGCKG | 3 cut(s) | 365, 3569, 3614 |
| MspI | CCGG | 9 cut(s) | 861, 1325, 1451, 1668, 1925, 2362, 2984, 3141, 3220 |
| MspR9I | CCNGG | 9 cut(s) | 885, 1451, 1452, 1668, 1844, 2000, 2985, 3141, 3142 |
| Mva1269I | GAATGC | 2 cut(s) | 293, 1086 |
| MvaI | CCWGG | 3 cut(s) | 885, 1844, 2000 |
| MvnI | CGCG | 2 cut(s) | 77, 3614 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 251, 1539, 1756, 2589, 3052, 3102, 3476, 3479, 3533 |
| NciI | CCSGG | 6 cut(s) | 1451, 1452, 1668, 2985, 3141, 3142 |
| NcoI | CCATGG | 1 cut(s) | 2276 |
| NdeI | CATATG | 4 cut(s) | 1385, 1629, 1755, 2959 |
| NlaIV | GGNNCC | 5 cut(s) | 181, 685, 794, 1575, 3469 |
| NmuCI | GTSAC | 2 cut(s) | 2788, 3655 |
| NotI | GCGGCCGC | 2 cut(s) | 3525, 3615 |
| NsiI | ATGCAT | 4 cut(s) | 293, 1535, 1599, 1635 |
| NspI | RCATGY | 1 cut(s) | 1263 |
| NspV | TTCGAA | 1 cut(s) | 642 |
| OliI | CACNNNNGTG | 1 cut(s) | 2755 |
| PaeR7I | CTCGAG | 2 cut(s) | 909, 2531 |
| PaqCI | CACCTGC | 1 cut(s) | 1054 |
| PciSI | GCTCTTC | 2 cut(s) | 1016, 2418 |
| PctI | GAATGC | 2 cut(s) | 293, 1086 |
| PdmI | GAANNNNTTC | 7 cut(s) | 140, 1002, 1188, 2052, 2220, 2571, 3429 |
| PflFI | GACNNNGTC | 1 cut(s) | 2776 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2018 |
| PfoI | TCCNGGA | 1 cut(s) | 2983 |
| PleI | GAGTC | 6 cut(s) | 621, 768, 928, 2016, 3224, 3383 |
| PmaCI | CACGTG | 1 cut(s) | 3253 |
| PmlI | CACGTG | 1 cut(s) | 3253 |
| PpsI | GAGTC | 6 cut(s) | 621, 768, 928, 2016, 3224, 3383 |
| Ppu21I | YACGTR | 1 cut(s) | 3253 |
| PsiI | TTATAA | 1 cut(s) | 902 |
| Psp1406I | AACGTT | 1 cut(s) | 2950 |
| Psp6I | CCWGG | 3 cut(s) | 883, 1842, 1998 |
| PspCI | CACGTG | 1 cut(s) | 3253 |
| PspGI | CCWGG | 3 cut(s) | 883, 1842, 1998 |
| PspN4I | GGNNCC | 5 cut(s) | 181, 685, 794, 1575, 3469 |
| PspPI | GGNCC | 8 cut(s) | 179, 841, 881, 1125, 1840, 2835, 2842, 3222 |
| PstI | CTGCAG | 2 cut(s) | 1084, 2182 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1150, 2792 |
| PsuI | RGATCY | 6 cut(s) | 1573, 1960, 2029, 2689, 3026, 3127 |
| PsyI | GACNNNGTC | 1 cut(s) | 2776 |
| PvuII | CAGCTG | 1 cut(s) | 365 |
| RsaI | GTAC | 7 cut(s) | 685, 802, 1202, 1441, 1527, 1906, 3218 |
| RsaNI | GTAC | 7 cut(s) | 684, 801, 1201, 1440, 1526, 1905, 3217 |
| RseI | CAYNNNNRTG | 6 cut(s) | 1352, 1388, 1476, 1592, 1638, 2755 |
| Rsr2I | CGGWCCG | 1 cut(s) | 3222 |
| RsrII | CGGWCCG | 1 cut(s) | 3222 |
| SacII | CCGCGG | 1 cut(s) | 3615 |
| SapI | GCTCTTC | 2 cut(s) | 1016, 2418 |
| Sau96I | GGNCC | 8 cut(s) | 179, 841, 881, 1125, 1840, 2835, 2842, 3222 |
| ScaI | AGTACT | 1 cut(s) | 1441 |
| SchI | GAGTC | 6 cut(s) | 621, 769, 928, 2017, 3224, 3384 |
| ScrFI | CCNGG | 9 cut(s) | 885, 1451, 1452, 1668, 1844, 2000, 2985, 3141, 3142 |
| SduI | GDGCHC | 4 cut(s) | 2335, 2460, 2673, 2724 |
| SfaNI | GCATC | 6 cut(s) | 601, 1380, 1584, 1642, 3400, 3755 |
| SfcI | CTRYAG | 6 cut(s) | 564, 768, 1038, 1080, 2178, 2245 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 3533 |
| Sfr274I | CTCGAG | 2 cut(s) | 909, 2531 |
| Sfr303I | CCGCGG | 1 cut(s) | 3615 |
| SfuI | TTCGAA | 1 cut(s) | 642 |
| SgrBI | CCGCGG | 1 cut(s) | 3615 |
| SinI | GGWCC | 6 cut(s) | 179, 841, 1125, 1840, 2835, 3222 |
| SlaI | CTCGAG | 2 cut(s) | 909, 2531 |
| SmaI | CCCGGG | 2 cut(s) | 1452, 3142 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 1352, 1388, 1476, 1592, 1638, 2755 |
| SpeI | ACTAGT | 2 cut(s) | 940, 3449 |
| SspI | AATATT | 1 cut(s) | 3040 |
| SspMI | CTAG | 8 cut(s) | 941, 2564, 2687, 2735, 3450, 3464, 3497, 3587 |
| StyD4I | CCNGG | 9 cut(s) | 883, 1449, 1450, 1666, 1842, 1998, 2983, 3139, 3140 |
| StyI | CCWWGG | 3 cut(s) | 1836, 2276, 3394 |
| TaaI | ACNGT | 8 cut(s) | 126, 653, 1475, 2246, 3176, 3193, 3351, 3715 |
| TaiI | ACGT | 2 cut(s) | 2953, 3255 |
| TaqII | GACCGA | 4 cut(s) | 829, 1113, 2852, 3239 |
| TatI | WGTACW | 4 cut(s) | 1200, 1439, 1525, 1904 |
| TauI | GCSGC | 8 cut(s) | 2704, 3473, 3482, 3527, 3530, 3569, 3617, 3620 |
| TscAI | CASTG | 6 cut(s) | 656, 1480, 2724, 2793, 3181, 3526 |
| TseFI | GTSAC | 2 cut(s) | 2788, 3655 |
| TseI | GCWGC | 6 cut(s) | 113, 362, 1079, 1307, 2428, 3569 |
| Tsp45I | GTSAC | 2 cut(s) | 2788, 3655 |
| TspGWI | ACGGA | 6 cut(s) | 168, 208, 338, 1004, 2682, 3035 |
| TspMI | CCCGGG | 2 cut(s) | 1450, 3140 |
| TspRI | CASTG | 6 cut(s) | 656, 1480, 2724, 2793, 3181, 3526 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2776 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2018 |
| VpaK11BI | GGWCC | 6 cut(s) | 179, 841, 1125, 1840, 2835, 3222 |
| XbaI | TCTAGA | 1 cut(s) | 2734 |
| XceI | RCATGY | 1 cut(s) | 1263 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2852 |
| XhoI | CTCGAG | 2 cut(s) | 909, 2531 |
| XmaI | CCCGGG | 2 cut(s) | 1450, 3140 |
| XmiI | GTMKAC | 2 cut(s) | 280, 1944 |
| XmnI | GAANNNNTTC | 7 cut(s) | 140, 1002, 1188, 2052, 2220, 2571, 3429 |
| XspI | CTAG | 8 cut(s) | 941, 2564, 2687, 2735, 3450, 3464, 3497, 3587 |
| ZrmI | AGTACT | 1 cut(s) | 1441 |
| Zsp2I | ATGCAT | 4 cut(s) | 293, 1535, 1599, 1635 |