Disease resistance protein (TIR-NBS-LRR class)
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 665 |
| AccBSI | CCGCTC | 1 cut(s) | 1468 |
| AccI | GTMKAC | 1 cut(s) | 591 |
| AccIII | TCCGGA | 2 cut(s) | 571, 1129 |
| AclI | AACGTT | 1 cut(s) | 1717 |
| AclWI | GGATC | 7 cut(s) | 215, 228, 473, 1019, 1451, 1587, 1801 |
| AcoI | YGGCCR | 1 cut(s) | 2295 |
| AcsI | RAATTY | 6 cut(s) | 298, 724, 748, 1338, 1761, 2186 |
| AcvI | CACGTG | 1 cut(s) | 2020 |
| AdeI | CACNNNGTG | 1 cut(s) | 46 |
| AfaI | GTAC | 4 cut(s) | 88, 174, 553, 1985 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 665, 2256, 2304, 2352, 2400 |
| AflIII | ACRYGT | 1 cut(s) | 2019 |
| AhlI | ACTAGT | 1 cut(s) | 2219 |
| AjnI | CCWGG | 1 cut(s) | 645 |
| AleI | CACNNNNGTG | 1 cut(s) | 1522 |
| Alw21I | GWGCWC | 1 cut(s) | 1491 |
| AlwI | GGATC | 7 cut(s) | 215, 228, 473, 1019, 1451, 1587, 1801 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1559 |
| Ama87I | CYCGRG | 3 cut(s) | 97, 1298, 1907 |
| Aor13HI | TCCGGA | 2 cut(s) | 571, 1129 |
| AoxI | GGCC | 5 cut(s) | 439, 1608, 2041, 2164, 2295 |
| ApeKI | GCWGC | 3 cut(s) | 1195, 2342, 2390 |
| ApoI | RAATTY | 6 cut(s) | 298, 724, 748, 1338, 1761, 2186 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1558, 1590, 2415, 2447 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 699, 867, 1338, 2196 |
| AspLEI | GCGC | 1 cut(s) | 108 |
| AspS9I | GGNCC | 4 cut(s) | 487, 1602, 1609, 1989 |
| AsuC2I | CCSGG | 4 cut(s) | 315, 1752, 1908, 1909 |
| AsuHPI | GGTGA | 2 cut(s) | 1034, 1958 |
| AsuII | TTCGAA | 1 cut(s) | 2516 |
| AvaI | CYCGRG | 3 cut(s) | 97, 1298, 1907 |
| AvaII | GGWCC | 3 cut(s) | 487, 1602, 1989 |
| BaeGI | GKGCMC | 1 cut(s) | 984 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 813, 846 |
| BamHI | GGATCC | 1 cut(s) | 220 |
| BanII | GRGCYC | 2 cut(s) | 1227, 1440 |
| BbrPI | CACGTG | 1 cut(s) | 2020 |
| BbsI | GAAGAC | 3 cut(s) | 1490, 1512, 2064 |
| Bbv12I | GWGCWC | 1 cut(s) | 1491 |
| BbvI | GCAGC | 3 cut(s) | 1182, 2354, 2377 |
| BccI | CCATC | 4 cut(s) | 373, 793, 853, 1427 |
| BceAI | ACGGC | 2 cut(s) | 1183, 2028 |
| BciT130I | CCWGG | 1 cut(s) | 647 |
| BcnI | CCSGG | 4 cut(s) | 315, 1752, 1908, 1909 |
| BcuI | ACTAGT | 1 cut(s) | 2219 |
| BfaI | CTAG | 9 cut(s) | 491, 1331, 1454, 1502, 2220, 2234, 2267, 2315, 2363 |
| BfmI | CTRYAG | 2 cut(s) | 825, 892 |
| BglII | AGATCT | 3 cut(s) | 607, 676, 1894 |
| BmcAI | AGTACT | 1 cut(s) | 88 |
| Bme1390I | CCNGG | 5 cut(s) | 315, 647, 1752, 1908, 1909 |
| Bme18I | GGWCC | 3 cut(s) | 487, 1602, 1989 |
| BmeT110I | CYCGRG | 3 cut(s) | 97, 1298, 1907 |
| BmgT120I | GGNCC | 4 cut(s) | 487, 1602, 1609, 1989 |
| BmiI | GGNNCC | 2 cut(s) | 222, 2239 |
| BmrFI | CCNGG | 5 cut(s) | 315, 647, 1752, 1908, 1909 |
| BmrI | ACTGGG | 1 cut(s) | 1017 |
| BmsI | GCATC | 5 cut(s) | 27, 231, 289, 1660, 2167 |
| BmuI | ACTGGG | 1 cut(s) | 1017 |
| BpiI | GAAGAC | 3 cut(s) | 1490, 1512, 2064 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1292, 1324 |
| BpmI | CTGGAG | 2 cut(s) | 363, 1178 |
| Bpu14I | TTCGAA | 1 cut(s) | 2516 |
| BpuEI | CTTGAG | 9 cut(s) | 210, 271, 404, 430, 1043, 1106, 1211, 1424, 1556 |
| BpuMI | CCSGG | 4 cut(s) | 315, 1752, 1908, 1909 |
| Bsa29I | ATCGAT | 1 cut(s) | 468 |
| BsaAI | YACGTR | 1 cut(s) | 2020 |
| BsaBI | GATNNNNATC | 3 cut(s) | 606, 1038, 1899 |
| BsaI | GGTCTC | 1 cut(s) | 1397 |
| BsaJI | CCNNGG | 5 cut(s) | 483, 923, 1605, 1907, 2161 |
| BsaWI | WCCGGW | 3 cut(s) | 571, 1129, 1986 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1396, 1426 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 665, 2256, 2304, 2352, 2400 |
| Bse1I | ACTGG | 3 cut(s) | 1012, 1484, 2448 |
| Bse3DI | GCAATG | 2 cut(s) | 1367, 2512 |
| Bse8I | GATNNNNATC | 3 cut(s) | 606, 1038, 1899 |
| BseAI | TCCGGA | 2 cut(s) | 571, 1129 |
| BseBI | CCWGG | 1 cut(s) | 647 |
| BseCI | ATCGAT | 1 cut(s) | 468 |
| BseDI | CCNNGG | 5 cut(s) | 483, 923, 1605, 1907, 2161 |
| BseGI | GGATG | 8 cut(s) | 42, 136, 246, 1672, 2265, 2313, 2361, 2409 |
| BseJI | GATNNNNATC | 3 cut(s) | 606, 1038, 1899 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 665, 2256, 2304, 2352, 2400 |
| BseMI | GCAATG | 2 cut(s) | 1367, 2512 |
| BseMII | CTCAG | 1 cut(s) | 1019 |
| BseNI | ACTGG | 3 cut(s) | 1012, 1484, 2448 |
| BseRI | GAGGAG | 1 cut(s) | 2285 |
| BseSI | GKGCMC | 1 cut(s) | 984 |
| BseX3I | CGGCCG | 1 cut(s) | 2295 |
| BseXI | GCAGC | 3 cut(s) | 1182, 2354, 2377 |
| BsgI | GTGCAG | 3 cut(s) | 711, 1234, 1545 |
| Bsh1285I | CGRYCG | 2 cut(s) | 2004, 2298 |
| BshFI | GGCC | 5 cut(s) | 441, 1610, 2043, 2166, 2297 |
| BshVI | ATCGAT | 1 cut(s) | 468 |
| BsiEI | CGRYCG | 2 cut(s) | 2004, 2298 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1491 |
| BsiHKCI | CYCGRG | 3 cut(s) | 97, 1298, 1907 |
| BsiSI | CCGG | 6 cut(s) | 315, 572, 1130, 1751, 1908, 1987 |
| BslFI | GGGAC | 3 cut(s) | 976, 1192, 1983 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 665, 2256, 2304, 2352, 2400 |
| BsmFI | GGGAC | 3 cut(s) | 976, 1192, 1983 |
| BsnI | GGCC | 5 cut(s) | 441, 1610, 2043, 2166, 2297 |
| Bso31I | GGTCTC | 1 cut(s) | 1397 |
| BsoBI | CYCGRG | 3 cut(s) | 97, 1298, 1907 |
| Bsp119I | TTCGAA | 1 cut(s) | 2516 |
| Bsp1286I | GDGCHC | 4 cut(s) | 984, 1227, 1440, 1491 |
| Bsp13I | TCCGGA | 2 cut(s) | 571, 1129 |
| Bsp1407I | TGTACA | 1 cut(s) | 551 |
| Bsp19I | CCATGG | 1 cut(s) | 923 |
| BspANI | GGCC | 5 cut(s) | 441, 1610, 2043, 2166, 2297 |
| BspCNI | CTCAG | 1 cut(s) | 1020 |
| BspDI | ATCGAT | 1 cut(s) | 468 |
| BspEI | TCCGGA | 2 cut(s) | 571, 1129 |
| BspLI | GGNNCC | 2 cut(s) | 222, 2239 |
| BspMAI | CTGCAG | 1 cut(s) | 829 |
| BspPI | GGATC | 7 cut(s) | 215, 228, 473, 1019, 1451, 1587, 1801 |
| BspQI | GCTCTTC | 1 cut(s) | 1185 |
| BspT104I | TTCGAA | 1 cut(s) | 2516 |
| BspTNI | GGTCTC | 1 cut(s) | 1397 |
| BsrBI | CCGCTC | 1 cut(s) | 1468 |
| BsrDI | GCAATG | 2 cut(s) | 1367, 2512 |
| BsrGI | TGTACA | 1 cut(s) | 551 |
| BsrI | ACTGG | 3 cut(s) | 1012, 1484, 2448 |
| BssECI | CCNNGG | 5 cut(s) | 483, 923, 1605, 1907, 2161 |
| BssNAI | GTATAC | 1 cut(s) | 592 |
| BssT1I | CCWWGG | 3 cut(s) | 483, 923, 2161 |
| Bst1107I | GTATAC | 1 cut(s) | 592 |
| Bst2UI | CCWGG | 1 cut(s) | 647 |
| Bst4CI | ACNGT | 6 cut(s) | 122, 893, 979, 1943, 1960, 2118 |
| Bst6I | CTCTTC | 2 cut(s) | 991, 1185 |
| BstAUI | TGTACA | 1 cut(s) | 551 |
| BstBAI | YACGTR | 1 cut(s) | 2020 |
| BstBI | TTCGAA | 1 cut(s) | 2516 |
| BstC8I | GCNNGC | 1 cut(s) | 1466 |
| BstDEI | CTNAG | 6 cut(s) | 450, 473, 808, 1028, 1378, 2466 |
| BstDSI | CCRYGG | 1 cut(s) | 923 |
| BstF5I | GGATG | 8 cut(s) | 42, 136, 246, 1672, 2265, 2313, 2361, 2409 |
| BstHHI | GCGC | 1 cut(s) | 108 |
| BstMCI | CGRYCG | 2 cut(s) | 2004, 2298 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 186, 403, 1356, 1819, 1869, 2246, 2249 |
| BstNI | CCWGG | 1 cut(s) | 647 |
| BstSCI | CCNGG | 5 cut(s) | 313, 645, 1750, 1906, 1907 |
| BstSFI | CTRYAG | 2 cut(s) | 825, 892 |
| BstSLI | GKGCMC | 1 cut(s) | 984 |
| BstV1I | GCAGC | 3 cut(s) | 1182, 2354, 2377 |
| BstV2I | GAAGAC | 3 cut(s) | 1490, 1512, 2064 |
| BstX2I | RGATCY | 6 cut(s) | 220, 607, 676, 1456, 1793, 1894 |
| BstYI | RGATCY | 6 cut(s) | 220, 607, 676, 1456, 1793, 1894 |
| BstZ17I | GTATAC | 1 cut(s) | 592 |
| BstZI | CGGCCG | 1 cut(s) | 2295 |
| Bsu15I | ATCGAT | 1 cut(s) | 468 |
| BsuRI | GGCC | 5 cut(s) | 441, 1610, 2043, 2166, 2297 |
| BsuTUI | ATCGAT | 1 cut(s) | 468 |
| BtgI | CCRYGG | 1 cut(s) | 923 |
| BtgZI | GCGATG | 1 cut(s) | 2323 |
| BtsCI | GGATG | 8 cut(s) | 42, 136, 246, 1672, 2265, 2313, 2361, 2409 |
| BtsI | GCAGTG | 1 cut(s) | 2289 |
| BtsIMutI | CAGTG | 6 cut(s) | 127, 984, 1491, 1560, 1948, 2289 |
| Cac8I | GCNNGC | 1 cut(s) | 1466 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1559 |
| CciNI | GCGGCCGC | 1 cut(s) | 2295 |
| CfoI | GCGC | 1 cut(s) | 108 |
| Cfr13I | GGNCC | 4 cut(s) | 487, 1602, 1609, 1989 |
| Cfr9I | CCCGGG | 1 cut(s) | 1907 |
| ClaI | ATCGAT | 1 cut(s) | 468 |
| CpoI | CGGWCCG | 1 cut(s) | 1989 |
| Csp6I | GTAC | 4 cut(s) | 87, 173, 552, 1984 |
| CspI | CGGWCCG | 1 cut(s) | 1989 |
| CviAII | CATG | 6 cut(s) | 140, 924, 1396, 1494, 1733, 2128 |
| CviQI | GTAC | 4 cut(s) | 87, 173, 552, 1984 |
| DdeI | CTNAG | 6 cut(s) | 450, 473, 808, 1028, 1378, 2466 |
| DraI | TTTAAA | 1 cut(s) | 1290 |
| DraIII | CACNNNGTG | 1 cut(s) | 46 |
| EaeI | YGGCCR | 1 cut(s) | 2295 |
| EagI | CGGCCG | 1 cut(s) | 2295 |
| Eam1104I | CTCTTC | 2 cut(s) | 991, 1185 |
| EarI | CTCTTC | 2 cut(s) | 991, 1185 |
| EciI | GGCGGA | 1 cut(s) | 65 |
| EclXI | CGGCCG | 1 cut(s) | 2295 |
| Eco130I | CCWWGG | 3 cut(s) | 483, 923, 2161 |
| Eco24I | GRGCYC | 2 cut(s) | 1227, 1440 |
| Eco31I | GGTCTC | 1 cut(s) | 1397 |
| Eco47I | GGWCC | 3 cut(s) | 487, 1602, 1989 |
| Eco52I | CGGCCG | 1 cut(s) | 2295 |
| Eco72I | CACGTG | 1 cut(s) | 2020 |
| Eco88I | CYCGRG | 3 cut(s) | 97, 1298, 1907 |
| EcoRII | CCWGG | 1 cut(s) | 645 |
| EcoT14I | CCWWGG | 3 cut(s) | 483, 923, 2161 |
| EcoT22I | ATGCAT | 2 cut(s) | 246, 282 |
| EcoT38I | GRGCYC | 2 cut(s) | 1227, 1440 |
| ErhI | CCWWGG | 3 cut(s) | 483, 923, 2161 |
| FaeI | CATG | 6 cut(s) | 143, 927, 1399, 1497, 1736, 2131 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 2439, 2471, 2469, 2501 |
| FaqI | GGGAC | 3 cut(s) | 976, 1192, 1983 |
| FatI | CATG | 6 cut(s) | 139, 923, 1395, 1493, 1732, 2127 |
| FauNDI | CATATG | 4 cut(s) | 32, 276, 402, 1726 |
| FblI | GTMKAC | 1 cut(s) | 591 |
| FokI | GGATG | 8 cut(s) | 49, 143, 253, 1679, 2272, 2320, 2368, 2416 |
| FriOI | GRGCYC | 2 cut(s) | 1227, 1440 |
| FspBI | CTAG | 9 cut(s) | 491, 1331, 1454, 1502, 2220, 2234, 2267, 2315, 2363 |
| GlaI | GCGC | 1 cut(s) | 107 |
| GsuI | CTGGAG | 2 cut(s) | 363, 1178 |
| HaeIII | GGCC | 5 cut(s) | 441, 1610, 2043, 2166, 2297 |
| HapII | CCGG | 6 cut(s) | 315, 572, 1130, 1751, 1908, 1987 |
| HhaI | GCGC | 1 cut(s) | 108 |
| Hin1II | CATG | 6 cut(s) | 143, 927, 1399, 1497, 1736, 2131 |
| Hin6I | GCGC | 1 cut(s) | 106 |
| HinP1I | GCGC | 1 cut(s) | 106 |
| HindIII | AAGCTT | 4 cut(s) | 228, 734, 1357, 1811 |
| HpaII | CCGG | 6 cut(s) | 315, 572, 1130, 1751, 1908, 1987 |
| HphI | GGTGA | 2 cut(s) | 1034, 1958 |
| Hpy166II | GTNNAC | 5 cut(s) | 343, 523, 592, 2114, 2225 |
| Hpy188I | TCNGA | 7 cut(s) | 614, 747, 1682, 1831, 2056, 2077, 2184 |
| Hpy8I | GTNNAC | 5 cut(s) | 343, 523, 592, 2114, 2225 |
| HpyAV | CCTTC | 2 cut(s) | 332, 720 |
| HpyCH4III | ACNGT | 6 cut(s) | 122, 893, 979, 1943, 1960, 2118 |
| HpyCH4IV | ACGT | 3 cut(s) | 334, 1717, 2019 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 186, 403, 1356, 1819, 1869, 2246, 2249 |
| HpyF3I | CTNAG | 6 cut(s) | 450, 473, 808, 1028, 1378, 2466 |
| HpySE526I | ACGT | 3 cut(s) | 334, 1717, 2019 |
| Hsp92II | CATG | 6 cut(s) | 143, 927, 1399, 1497, 1736, 2131 |
| HspAI | GCGC | 1 cut(s) | 106 |
| Kpn2I | TCCGGA | 2 cut(s) | 571, 1129 |
| LguI | GCTCTTC | 1 cut(s) | 1185 |
| LmnI | GCTCC | 3 cut(s) | 1494, 2237, 2510 |
| Lsp1109I | GCAGC | 3 cut(s) | 1182, 2354, 2377 |
| LweI | GCATC | 5 cut(s) | 27, 231, 289, 1660, 2167 |
| MaeI | CTAG | 9 cut(s) | 491, 1331, 1454, 1502, 2220, 2234, 2267, 2315, 2363 |
| MaeII | ACGT | 3 cut(s) | 334, 1717, 2019 |
| MaeIII | GTNAC | 7 cut(s) | 476, 786, 887, 1555, 1655, 2431, 2461 |
| MbiI | CCGCTC | 1 cut(s) | 1468 |
| MflI | RGATCY | 6 cut(s) | 220, 607, 676, 1456, 1793, 1894 |
| MhlI | GDGCHC | 4 cut(s) | 984, 1227, 1440, 1491 |
| MlyI | GAGTC | 2 cut(s) | 664, 1829 |
| MmeI | TCCRAC | 2 cut(s) | 198, 481 |
| Mph1103I | ATGCAT | 2 cut(s) | 246, 282 |
| MroI | TCCGGA | 2 cut(s) | 571, 1129 |
| MroXI | GAANNNNTTC | 4 cut(s) | 699, 867, 1338, 2196 |
| MslI | CAYNNNNRTG | 6 cut(s) | 35, 123, 239, 285, 997, 1522 |
| MspA1I | CMGCKG | 2 cut(s) | 2006, 2390 |
| MspI | CCGG | 6 cut(s) | 315, 572, 1130, 1751, 1908, 1987 |
| MspR9I | CCNGG | 5 cut(s) | 315, 647, 1752, 1908, 1909 |
| MvaI | CCWGG | 1 cut(s) | 647 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 186, 403, 1356, 1819, 1869, 2246, 2249 |
| NciI | CCSGG | 4 cut(s) | 315, 1752, 1908, 1909 |
| NcoI | CCATGG | 1 cut(s) | 923 |
| NdeI | CATATG | 4 cut(s) | 32, 276, 402, 1726 |
| NlaIII | CATG | 6 cut(s) | 143, 927, 1399, 1497, 1736, 2131 |
| NlaIV | GGNNCC | 2 cut(s) | 222, 2239 |
| NmuCI | GTSAC | 2 cut(s) | 1555, 2431 |
| NotI | GCGGCCGC | 1 cut(s) | 2295 |
| NsiI | ATGCAT | 2 cut(s) | 246, 282 |
| NspV | TTCGAA | 1 cut(s) | 2516 |
| OliI | CACNNNNGTG | 1 cut(s) | 1522 |
| PaeR7I | CTCGAG | 1 cut(s) | 1298 |
| PciSI | GCTCTTC | 1 cut(s) | 1185 |
| PdmI | GAANNNNTTC | 4 cut(s) | 699, 867, 1338, 2196 |
| PfeI | GAWTC | 9 cut(s) | 49, 207, 255, 445, 880, 907, 1213, 1262, 1927 |
| PflFI | GACNNNGTC | 1 cut(s) | 1543 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 665 |
| PfoI | TCCNGGA | 1 cut(s) | 1750 |
| PleI | GAGTC | 2 cut(s) | 663, 1829 |
| PmaCI | CACGTG | 1 cut(s) | 2020 |
| PmlI | CACGTG | 1 cut(s) | 2020 |
| PpsI | GAGTC | 2 cut(s) | 663, 1829 |
| Ppu21I | YACGTR | 1 cut(s) | 2020 |
| Psp1406I | AACGTT | 1 cut(s) | 1717 |
| Psp6I | CCWGG | 1 cut(s) | 645 |
| PspCI | CACGTG | 1 cut(s) | 2020 |
| PspGI | CCWGG | 1 cut(s) | 645 |
| PspN4I | GGNNCC | 2 cut(s) | 222, 2239 |
| PspPI | GGNCC | 4 cut(s) | 487, 1602, 1609, 1989 |
| PstI | CTGCAG | 1 cut(s) | 829 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1559 |
| PsuI | RGATCY | 6 cut(s) | 220, 607, 676, 1456, 1793, 1894 |
| PsyI | GACNNNGTC | 1 cut(s) | 1543 |
| RsaI | GTAC | 4 cut(s) | 88, 174, 553, 1985 |
| RsaNI | GTAC | 4 cut(s) | 87, 173, 552, 1984 |
| RseI | CAYNNNNRTG | 6 cut(s) | 35, 123, 239, 285, 997, 1522 |
| Rsr2I | CGGWCCG | 1 cut(s) | 1989 |
| RsrII | CGGWCCG | 1 cut(s) | 1989 |
| SapI | GCTCTTC | 1 cut(s) | 1185 |
| Sau96I | GGNCC | 4 cut(s) | 487, 1602, 1609, 1989 |
| ScaI | AGTACT | 1 cut(s) | 88 |
| SchI | GAGTC | 2 cut(s) | 664, 1829 |
| ScrFI | CCNGG | 5 cut(s) | 315, 647, 1752, 1908, 1909 |
| SduI | GDGCHC | 4 cut(s) | 984, 1227, 1440, 1491 |
| SfaNI | GCATC | 5 cut(s) | 27, 231, 289, 1660, 2167 |
| SfcI | CTRYAG | 2 cut(s) | 825, 892 |
| Sfr274I | CTCGAG | 1 cut(s) | 1298 |
| SfuI | TTCGAA | 1 cut(s) | 2516 |
| SinI | GGWCC | 3 cut(s) | 487, 1602, 1989 |
| SlaI | CTCGAG | 1 cut(s) | 1298 |
| SmaI | CCCGGG | 1 cut(s) | 1909 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 35, 123, 239, 285, 997, 1522 |
| SpeI | ACTAGT | 1 cut(s) | 2219 |
| SspI | AATATT | 1 cut(s) | 1807 |
| SspMI | CTAG | 9 cut(s) | 491, 1331, 1454, 1502, 2220, 2234, 2267, 2315, 2363 |
| StyD4I | CCNGG | 5 cut(s) | 313, 645, 1750, 1906, 1907 |
| StyI | CCWWGG | 3 cut(s) | 483, 923, 2161 |
| TaaI | ACNGT | 6 cut(s) | 122, 893, 979, 1943, 1960, 2118 |
| TaiI | ACGT | 3 cut(s) | 337, 1720, 2022 |
| TaqI | TCGA | 7 cut(s) | 468, 544, 703, 764, 1299, 1783, 2516 |
| TaqII | GACCGA | 2 cut(s) | 1619, 2006 |
| TatI | WGTACW | 3 cut(s) | 86, 172, 551 |
| TauI | GCSGC | 7 cut(s) | 1471, 2243, 2252, 2297, 2300, 2348, 2396 |
| TfiI | GAWTC | 9 cut(s) | 49, 207, 255, 445, 880, 907, 1213, 1262, 1927 |
| TscAI | CASTG | 6 cut(s) | 127, 984, 1491, 1560, 1948, 2296 |
| TseFI | GTSAC | 2 cut(s) | 1555, 2431 |
| TseI | GCWGC | 3 cut(s) | 1195, 2342, 2390 |
| Tsp45I | GTSAC | 2 cut(s) | 1555, 2431 |
| TspGWI | ACGGA | 4 cut(s) | 125, 1449, 1679, 1802 |
| TspMI | CCCGGG | 1 cut(s) | 1907 |
| TspRI | CASTG | 6 cut(s) | 127, 984, 1491, 1560, 1948, 2296 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1543 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 665 |
| VpaK11BI | GGWCC | 3 cut(s) | 487, 1602, 1989 |
| XapI | RAATTY | 6 cut(s) | 298, 724, 748, 1338, 1761, 2186 |
| XbaI | TCTAGA | 1 cut(s) | 1501 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1619 |
| XhoI | CTCGAG | 1 cut(s) | 1298 |
| XmaI | CCCGGG | 1 cut(s) | 1907 |
| XmiI | GTMKAC | 1 cut(s) | 591 |
| XmnI | GAANNNNTTC | 4 cut(s) | 699, 867, 1338, 2196 |
| XspI | CTAG | 9 cut(s) | 491, 1331, 1454, 1502, 2220, 2234, 2267, 2315, 2363 |
| ZrmI | AGTACT | 1 cut(s) | 88 |
| Zsp2I | ATGCAT | 2 cut(s) | 246, 282 |