Prupe.8G176400_v2.0.a1

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
17850620 .. 17856250
5631 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G176400.1

Sequence Viewer

Length: 3600 bp
ATGAATTCTTCTTCTTCTTCTGTTCCTTTTTCTGCTCCTCTTCAAGAAAAGTACGATGTGTTTCTTAGTTTCAGAGGTGAAGACACACGCGATACTTTTACCAGCCATCTTCACAAGGATTTACTTCGGAAGAACATTGACACCTACATAGATCGCAGGCTCGAGAGAGGAGATGAAATTGCTCCTGCCCTTCTAAAAGCAATCGAGAGATCGAAAATTGCACTAGTCATTTTCTCAAAAGACTATGCTTCTTCCGCATGGTGTTTGAAAGAACTTGTGCATATACTTGGATGCAAGAAAAGCCATGGACAGATTGTTATACCCATTTTTTATCGCATAGATCCATCACATGTACGAAAACAGCAGGGAACTTGTGCACTTGAAGATCGTCCACTTAAGCGCAGCAGTAGGGATGAGGATGAGGTGGCCAACTGGAGGGCTGCTTTGGAGGAAGCAGCCAATATGTCTGGGTTTCATTATTCCAGCAAAACAGGGAGGACAGAGGCCGATTTTGTTGAGGAAGTTGTCCAAGATGTTTTGACCAAATTGAATCGGGAATCGTCAAGTGATTTGAGGGGCCTGTTTGGAATTCAAAGGAAAATTGACAAAATTGAGTCGTTATTATGCTTGGATTCACCAGGTGTTTGCTGTGTAGGTATTTGGGGCATGGGTGGTATTGGCAAGACTACCCTTGCTGATGCTGTATTTCACAGGCAGTGGCAGTCCTCAAAATTTGAAGCTGCTTGTTTTCTCGCAAATGTCAGGGAGAAATCCGAAAAAACGGATGGACTAAATGAGTTGCGAAATACACTTGTTCGTGAATTATTGAAGGATAAAGATGTAAATATCAACACTCCGTCTGTTCCACCTCATATTCAAGATAGGCTCAGGCGTACAAAGGCGTTCATTGTTCTTGATGACGTGAATGCTCGAGAACACCTAGAAGTTCTTGTTGGTGATGATGATCGGTTTTGCCAAGGAAGTCGAATCATGGTAACTGCTAGAGATAAAGGCCTGCTTGAGCAAAAAATTGACCTTGAAAAGATATACAATGTTGAGGGATTAGGTTCTGATGAAGCTCTTGAGCTCTTTCACTCGCATGCTTTTGGAAATAAGTCCCCAACAACAGATTACACTGAGTTGTCAAGAGAGGTGGTGGATTATATTAAGGGCATTCCATTAGCTCTTAAAGTTATGGGGTCCTCATTCCGTCGTTGCAAGAGCAAACAAGAGTGGGAAGTTCAATGGAAAAAAGTGAAACGAGTTCCAATCGGAGAAATTCAGAAAGTGTTGAGAGTAAGTTACGATGGATTAGACGACAATGAGAAGGAGATATTTCTTGATGTAGCATGTTTTCATAAAGGCTATTTGAGGAAAAGTGTAGAAAAAATGTTAGATGGTTGTGATTTCTTTGGGGAAGCGGGAATCAATGACCTTATTGATAGGTCTCTCATATCAATTTCACAAGATATGGTGTTAAAAAAAGCGAAAGAGGAATACTCAGGACGGATAGTAGAGATGCAGTCAGTAGAACGGATAGGGATGCATGATTTGGTGCAGGAAATGGGTAGGGCAATTGCTCAAAAACAAGGCAGTAGGTTGTTTAATGCAGATGATGTCTATAAAGCGTTGACAAATAACCAGAGAGATGGACATGTTCAAGCCATATCCTTTGACTTGAATATGATTGGAAAGCCACACTTGAAAGATGCGAACTTCAAAAAGATGTATCAACTCAGATGGCTACGTGTTAGTTATCCATATCTTTTGAGTGGTTCTCTTCATCTTCCCAATTCTCTTAGATATCTTTACTGGCAGGGATATCCTTTAGAATCTTTGCCATCAAAATTTTCTGCTCAAAATCTTCTTGTCCTTGATACGCCGTACAGTGAATTTGGGGTGCCACTGTGGAATGAAGACCAGAGTCCAGTGAATTTAAAACGTATCAATCTTTTTTGGTCCAAACGTCTAACTGAAGTCCCAAATCTCTCTCGGAGTCTAAATATTGAGCATATAAATCTGCGAGGCTGTGAAAGTTTGGTTGAAATTCCTTCGTATTTTCAACATCTTGGCAAGCTTACTTATCTTCGCCTTGGGCTGTGCGCAAATCTCAAAAATCTTCCCGAGATGCCATGCAATCTTGAATTCTTAGATTTGTCTAGGACAGCAATAGAGGAATTGCCTTCATCAGTTTGGTCTCACGAAAAAATATCTCGCTTAGATATTAAATATTGTAAACACCTTAAGAGTCTTCCAAGCAACACTTGTAAACTGAAACTCTCGAGTTCTTTTAGTCTAGAGGGCTGCGTATCTCTTTGCGAGTTTTGGGAGCTTCCCAGGGGTACAACAGTGCTAGAGTTGAGTAGTACAACAATAAAAGAATTGAGGAATGAATCAATAGAGTCTGTTATTGGTCTCACTGCAATTAACCTGAACGATTGCGAAAGCCTTGTGAGTCTCCCAACGAACATTTGGAAGTTGAAATCTCTGGAGAGTCTTGATCTCATTCGTTGCTCCAAATTTCAATTCTTCCCAGAAATCTCAGAGGCTATGGAACATCTGGAGTTTCTAAATTTATCAGGTACAATGGTTAAAGAGGTACCCAAATCAATTGGAAATCTAGTTGCGCTTCGAAAATTACACATGGTTGAGTGCAGTATACAAGAAATCCCTGATGACCTTTTTAGCTTAACCTCATTACAAGAGTTAGATCTAAGTTTGACCGAAATTAAGAGCATACCTGCAAGCATCAAACAAGCTGCTCAGCTGTCTCACCTGTGCCTCAATGGTTGCAAGAGCCTTGAATCTTTACCAGAGCTCCCCCCATTATTGCAATGTCTTGAAGCAAAAGATTGCGTGTCACTGAGGACAGTGTCAAGTTCAAGCACTGCACTCGCACAAGGTTGGGAAAAATATATATTTTCTCAAGGGCTTCATGAGAAACATATATTTTCTGATTGCAGAAAGTTGGATGAGAATGCACGAAGCAACATATTCGGTGATGCACAACTCAGAATTATGCGAATGGCAACTGCGTCGTCGAAGTTTAAAGAAGACAAAATTGAACAACCATCATATGATTCGGATGATAGCTATGATGATTTTGAAGAGGGATTTTTACGCAAGAGATCTTTCGTTGCCATTAGATGTTCAGGGAGTGAAATTCCAAATTGGTTCAGCCATAAAAGTGAGGGATGTTCAATAAAGATTGAGCTTCCTCGTGATTGGTTTAGCACAGATTTCTTGGGTTTCGCTCTATCTCTTGTTGTTGACTTTGCTCCATGGGGTATGCAGCTTTTATGCAAGTTCAACTTCAAAACTAGTAATGGTGAAAGCCATGAAGTCAACCATCCTTTGTCTAGTCTGCACCCGAAAAATTTCATTACAAGGGAGTTATTTTCTTGTGATGAGGTGTTTGTGTGGTGGCATGATAATTTCTTTGAAGAAGTTGTAGAGGGAGCTCAAAGCCCCACTGCGTTTTACAAACTTGTTACTGAGGTCAATGTGGACTTCACCGTATGGACTTCACCGTTGAAAAAGTGTGGGATATGTCTGTTGTATGGCAAAGATGCTGAGATGATAAAGCAGAGGGCTTTGTAG

Protein Analysis

1200

Amino Acids

136.48

Weight (kDa)

6.08

Isoelectric Point (pI)

46.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 2104
Acc36I ACCTGC 1 cut(s) 2749
Acc65I GGTACC 1 cut(s) 2599
AccB1I GGYRCC 2 cut(s) 1900, 2599
AccI GTMKAC 1 cut(s) 2659
AccII CGCG 1 cut(s) 90
AciI CCGC 2 cut(s) 255, 1421
AclWI GGATC 1 cut(s) 335
AcoI YGGCCR 1 cut(s) 426
AcuI CTGAAG 1 cut(s) 1995
AdeI CACNNNGTG 1 cut(s) 641
AfaI GTAC 8 cut(s) 53, 354, 895, 1886, 2344, 2368, 2584, 2601
AfiI CCNNNNNNNGG 1 cut(s) 435
AflII CTTAAG 2 cut(s) 395, 2243
AflIII ACRYGT 3 cut(s) 349, 1654, 1747
AhlI ACTAGT 2 cut(s) 223, 3320
AjiI CACGTC 1 cut(s) 922
AjnI CCWGG 2 cut(s) 637, 2336
AjuI GAANNNNNNNTTGG 4 cut(s) 936, 968, 2510, 2542
Alw21I GWGCWC 4 cut(s) 379, 1089, 2820, 3463
Alw26I GTCTC 5 cut(s) 1452, 2202, 2420, 2462, 2775
Alw44I GTGCAC 1 cut(s) 375
AlwI GGATC 1 cut(s) 335
Ama87I CYCGRG 4 cut(s) 161, 930, 2123, 2281
AoxI GGCC 4 cut(s) 426, 504, 577, 1012
ApaLI GTGCAC 1 cut(s) 375
ApeKI GCWGC 7 cut(s) 402, 440, 455, 740, 2304, 2759, 3292
Asp700I GAANNNNTTC 1 cut(s) 3377
Asp718I GGTACC 1 cut(s) 2599
AspLEI GCGC 3 cut(s) 402, 2105, 2629
AspS9I GGNCC 3 cut(s) 577, 1200, 1959
AsuHPI GGTGA 8 cut(s) 89, 627, 968, 2765, 3011, 3341, 3505, 3519
AsuII TTCGAA 1 cut(s) 2632
AvaI CYCGRG 4 cut(s) 161, 930, 2123, 2281
AvaII GGWCC 2 cut(s) 1200, 1959
BaeGI GKGCMC 1 cut(s) 379
BaeI ACNNNNGTAYC 4 cut(s) 2334, 2367, 2574, 2607
BalI TGGCCA 1 cut(s) 428
BanI GGYRCC 2 cut(s) 1900, 2599
BanII GRGCYC 3 cut(s) 1089, 2820, 3463
BauI CACGAG 1 cut(s) 3219
BbsI GAAGAC 4 cut(s) 87, 1923, 2243, 3060
Bbv12I GWGCWC 4 cut(s) 379, 1089, 2820, 3463
BbvI GCAGC 7 cut(s) 414, 427, 467, 727, 2291, 2746, 3304
BceAI ACGGC 1 cut(s) 1867
BcgI CGANNNNNNTGC 6 cut(s) 2875, 2909, 2977, 3011, 3018, 3052
BciT130I CCWGG 2 cut(s) 639, 2338
BcoDI GTCTC 5 cut(s) 1452, 2202, 2420, 2462, 2775
BcuI ACTAGT 2 cut(s) 223, 3320
BfaI CTAG 9 cut(s) 224, 941, 1002, 2160, 2297, 2354, 2621, 3321, 3360
BfrI CTTAAG 2 cut(s) 395, 2243
BfuAI ACCTGC 1 cut(s) 2749
BglII AGATCT 2 cut(s) 2710, 3128
BisI GCNGC 7 cut(s) 403, 441, 456, 741, 2305, 2760, 3293
BlpI GCTNAGC 1 cut(s) 2763
BlsI GCNGC 7 cut(s) 404, 442, 457, 742, 2306, 2761, 3294
Bme1390I CCNGG 2 cut(s) 639, 2338
Bme18I GGWCC 2 cut(s) 1200, 1959
BmeT110I CYCGRG 4 cut(s) 161, 930, 2123, 2281
BmgBI CACGTC 1 cut(s) 922
BmgT120I GGNCC 3 cut(s) 577, 1200, 1959
BmiI GGNNCC 4 cut(s) 578, 1201, 1902, 2601
BmrFI CCNGG 2 cut(s) 639, 2338
BmsI GCATC 9 cut(s) 281, 688, 1509, 1533, 1699, 2118, 2757, 2992, 3559
BoxI GACNNNNGTC 1 cut(s) 1923
BpiI GAAGAC 4 cut(s) 87, 1923, 2243, 3060
BplI GAGNNNNNCTC 4 cut(s) 1484, 1516, 1762, 1794
BpmI CTGGAG 3 cut(s) 454, 2510, 2582
Bpu10I CCTNAGC 1 cut(s) 887
Bpu1102I GCTNAGC 1 cut(s) 2763
Bpu14I TTCGAA 1 cut(s) 2632
BpuEI CTTGAG 3 cut(s) 1040, 1103, 2910
BsaAI YACGTR 1 cut(s) 1748
BsaBI GATNNNNATC 1 cut(s) 963
BsaI GGTCTC 3 cut(s) 1452, 2202, 2420
BsaJI CCNNGG 6 cut(s) 304, 976, 2092, 2336, 2337, 3281
BsaXI ACNNNNNCTCC 2 cut(s) 2802, 2832
Bsc4I CCNNNNNNNGG 1 cut(s) 435
Bse1I ACTGG 3 cut(s) 437, 1817, 1928
Bse3DI GCAATG 1 cut(s) 2840
Bse8I GATNNNNATC 1 cut(s) 963
BseBI CCWGG 2 cut(s) 639, 2338
BseDI CCNNGG 6 cut(s) 304, 976, 2092, 2336, 2337, 3281
BseGI GGATG 9 cut(s) 296, 418, 424, 790, 1548, 2977, 3091, 3200, 3349
BseJI GATNNNNATC 1 cut(s) 963
BseLI CCNNNNNNNGG 1 cut(s) 435
BseMI GCAATG 1 cut(s) 2840
BseNI ACTGG 3 cut(s) 437, 1817, 1928
BseRI GAGGAG 2 cut(s) 27, 183
BseSI GKGCMC 1 cut(s) 379
BseXI GCAGC 7 cut(s) 414, 427, 467, 727, 2291, 2746, 3304
BsgI GTGCAG 4 cut(s) 1577, 2674, 2874, 3350
Bsh1236I CGCG 1 cut(s) 90
BshFI GGCC 4 cut(s) 428, 506, 579, 1014
BshNI GGYRCC 2 cut(s) 1900, 2599
BsiHKAI GWGCWC 4 cut(s) 379, 1089, 2820, 3463
BsiHKCI CYCGRG 4 cut(s) 161, 930, 2123, 2281
BslFI GGGAC 2 cut(s) 1102, 1964
BslI CCNNNNNNNGG 1 cut(s) 435
BsmAI GTCTC 5 cut(s) 1452, 2202, 2420, 2462, 2775
BsmFI GGGAC 2 cut(s) 1102, 1964
BsmI GAATGC 3 cut(s) 931, 1173, 2983
BsnI GGCC 4 cut(s) 428, 506, 579, 1014
Bso31I GGTCTC 3 cut(s) 1452, 2202, 2420
BsoBI CYCGRG 4 cut(s) 161, 930, 2123, 2281
Bsp119I TTCGAA 1 cut(s) 2632
Bsp1286I GDGCHC 4 cut(s) 379, 1089, 2820, 3463
Bsp143I GATC 8 cut(s) 151, 209, 340, 385, 964, 2500, 2710, 3128
Bsp1720I GCTNAGC 1 cut(s) 2763
Bsp19I CCATGG 2 cut(s) 304, 3281
BspACI CCGC 2 cut(s) 255, 1421
BspANI GGCC 4 cut(s) 428, 506, 579, 1014
BspFNI CGCG 1 cut(s) 90
BspHI TCATGA 1 cut(s) 2935
BspLI GGNNCC 4 cut(s) 578, 1201, 1902, 2601
BspMI ACCTGC 1 cut(s) 2749
BspPI GGATC 1 cut(s) 335
BspT104I TTCGAA 1 cut(s) 2632
BspT107I GGYRCC 2 cut(s) 1900, 2599
BspTI CTTAAG 2 cut(s) 395, 2243
BspTNI GGTCTC 3 cut(s) 1452, 2202, 2420
BsrDI GCAATG 1 cut(s) 2840
BsrI ACTGG 3 cut(s) 437, 1817, 1928
BssECI CCNNGG 6 cut(s) 304, 976, 2092, 2336, 2337, 3281
BssMI GATC 8 cut(s) 151, 209, 340, 385, 964, 2500, 2710, 3128
BssNAI GTATAC 1 cut(s) 2660
BssSI CACGAG 1 cut(s) 3219
BssT1I CCWWGG 4 cut(s) 304, 976, 2092, 3281
Bst1107I GTATAC 1 cut(s) 2660
Bst2BI CACGAG 1 cut(s) 3219
Bst2UI CCWGG 2 cut(s) 639, 2338
Bst4CI ACNGT 6 cut(s) 1889, 1908, 2350, 2872, 3517, 3531
Bst6I CTCTTC 3 cut(s) 45, 1785, 3102
BstAFI CTTAAG 2 cut(s) 395, 2243
BstBAI YACGTR 1 cut(s) 1748
BstBI TTCGAA 1 cut(s) 2632
BstC8I GCNNGC 5 cut(s) 158, 1016, 1101, 2075, 2746
BstDSI CCRYGG 2 cut(s) 304, 3281
BstF5I GGATG 9 cut(s) 296, 418, 424, 790, 1548, 2977, 3091, 3200, 3349
BstFNI CGCG 1 cut(s) 90
BstHHI GCGC 3 cut(s) 402, 2105, 2629
BstKTI GATC 8 cut(s) 154, 212, 343, 388, 967, 2503, 2713, 3131
BstMAI GTCTC 5 cut(s) 1452, 2202, 2420, 2462, 2775
BstMBI GATC 8 cut(s) 151, 209, 340, 385, 964, 2500, 2710, 3128
BstMWI GCNNNNNNNGC 2 cut(s) 254, 300
BstNI CCWGG 2 cut(s) 639, 2338
BstNSI RCATGY 4 cut(s) 353, 1103, 1353, 1658
BstPAI GACNNNNGTC 1 cut(s) 1923
BstSCI CCNGG 2 cut(s) 637, 2336
BstSLI GKGCMC 1 cut(s) 379
BstUI CGCG 1 cut(s) 90
BstV1I GCAGC 7 cut(s) 414, 427, 467, 727, 2291, 2746, 3304
BstV2I GAAGAC 4 cut(s) 87, 1923, 2243, 3060
BstX2I RGATCY 3 cut(s) 340, 2710, 3128
BstXI CCANNNNNNTGG 1 cut(s) 1649
BstYI RGATCY 3 cut(s) 340, 2710, 3128
BstZ17I GTATAC 1 cut(s) 2660
BsuRI GGCC 4 cut(s) 428, 506, 579, 1014
BtgI CCRYGG 2 cut(s) 304, 3281
BtrI CACGTC 1 cut(s) 922
BtsCI GGATG 9 cut(s) 296, 418, 424, 790, 1548, 2977, 3091, 3200, 3349
BtsI GCAGTG 4 cut(s) 722, 2418, 2886, 3471
BveI ACCTGC 1 cut(s) 2749
Cac8I GCNNGC 5 cut(s) 158, 1016, 1101, 2075, 2746
CciI TCATGA 1 cut(s) 2935
CfoI GCGC 3 cut(s) 402, 2105, 2629
Cfr13I GGNCC 3 cut(s) 577, 1200, 1959
CseI GACGC 1 cut(s) 3024
CsiI ACCWGGT 1 cut(s) 637
Csp6I GTAC 8 cut(s) 52, 353, 894, 1885, 2343, 2367, 2583, 2600
CspCI CAANNNNNGTGG 2 cut(s) 1134, 1169
CviQI GTAC 8 cut(s) 52, 353, 894, 1885, 2343, 2367, 2583, 2600
DpnI GATC 8 cut(s) 153, 211, 342, 387, 966, 2502, 2712, 3130
DpnII GATC 8 cut(s) 151, 209, 340, 385, 964, 2500, 2710, 3128
DraI TTTAAA 2 cut(s) 1938, 3049
DraIII CACNNNGTG 1 cut(s) 641
EaeI YGGCCR 1 cut(s) 426
Eam1104I CTCTTC 3 cut(s) 45, 1785, 3102
EarI CTCTTC 3 cut(s) 45, 1785, 3102
Ecl136II GAGCTC 3 cut(s) 1087, 2818, 3461
Eco130I CCWWGG 4 cut(s) 304, 976, 2092, 3281
Eco147I AGGCCT 1 cut(s) 1014
Eco24I GRGCYC 3 cut(s) 1089, 2820, 3463
Eco31I GGTCTC 3 cut(s) 1452, 2202, 2420
Eco32I GATATC 2 cut(s) 1805, 1823
Eco47I GGWCC 2 cut(s) 1200, 1959
Eco53kI GAGCTC 3 cut(s) 1087, 2818, 3461
Eco57I CTGAAG 1 cut(s) 1995
Eco88I CYCGRG 4 cut(s) 161, 930, 2123, 2281
EcoICRI GAGCTC 3 cut(s) 1087, 2818, 3461
EcoO109I RGGNCCY 2 cut(s) 577, 1200
EcoRI GAATTC 3 cut(s) 4, 588, 2144
EcoRII CCWGG 2 cut(s) 637, 2336
EcoRV GATATC 2 cut(s) 1805, 1823
EcoT14I CCWWGG 4 cut(s) 304, 976, 2092, 3281
EcoT22I ATGCAT 1 cut(s) 1548
EcoT38I GRGCYC 3 cut(s) 1089, 2820, 3463
ErhI CCWWGG 4 cut(s) 304, 976, 2092, 3281
FalI AAGNNNNNCTT 8 cut(s) 1002, 1034, 1685, 1717, 2248, 2280, 3296, 3328
FaqI GGGAC 2 cut(s) 1102, 1964
FauI CCCGC 1 cut(s) 1414
FauNDI CATATG 1 cut(s) 3076
FblI GTMKAC 1 cut(s) 2659
Fnu4HI GCNGC 7 cut(s) 403, 441, 456, 741, 2305, 2760, 3293
FokI GGATG 9 cut(s) 303, 425, 431, 797, 1555, 2984, 3098, 3207, 3336
FriOI GRGCYC 3 cut(s) 1089, 2820, 3463
Fsp4HI GCNGC 7 cut(s) 403, 441, 456, 741, 2305, 2760, 3293
FspBI CTAG 9 cut(s) 224, 941, 1002, 2160, 2297, 2354, 2621, 3321, 3360
FspI TGCGCA 1 cut(s) 2104
GlaI GCGC 3 cut(s) 401, 2104, 2628
GluI GCNGC 7 cut(s) 403, 441, 456, 741, 2305, 2760, 3293
GsuI CTGGAG 3 cut(s) 454, 2510, 2582
HaeIII GGCC 4 cut(s) 428, 506, 579, 1014
HgaI GACGC 1 cut(s) 3024
HhaI GCGC 3 cut(s) 402, 2105, 2629
Hin6I GCGC 3 cut(s) 400, 2103, 2627
HinP1I GCGC 3 cut(s) 400, 2103, 2627
HincII GTYRAC 3 cut(s) 1632, 3271, 3346
HindII GTYRAC 3 cut(s) 1632, 3271, 3346
HindIII AAGCTT 1 cut(s) 2075
HphI GGTGA 8 cut(s) 89, 627, 968, 2765, 3011, 3341, 3505, 3519
Hpy166II GTNNAC 9 cut(s) 377, 392, 1632, 2237, 2270, 2660, 3271, 3346, 3508
Hpy8I GTNNAC 9 cut(s) 377, 392, 1632, 2237, 2270, 2660, 3271, 3346, 3508
Hpy99I CGWCG 3 cut(s) 1215, 3040, 3043
HpyAV CCTTC 5 cut(s) 200, 823, 1321, 2061, 2193
HpyCH4III ACNGT 6 cut(s) 1889, 1908, 2350, 2872, 3517, 3531
HpyCH4IV ACGT 4 cut(s) 921, 1747, 1942, 1966
HpyF10VI GCNNNNNNNGC 2 cut(s) 254, 300
HpySE526I ACGT 4 cut(s) 921, 1747, 1942, 1966
HspAI GCGC 3 cut(s) 400, 2103, 2627
KpnI GGTACC 1 cut(s) 2603
Kzo9I GATC 8 cut(s) 151, 209, 340, 385, 964, 2500, 2710, 3128
LmnI GCTCC 7 cut(s) 40, 187, 2329, 2519, 2823, 3283, 3458
Lsp1109I GCAGC 7 cut(s) 414, 427, 467, 727, 2291, 2746, 3304
LweI GCATC 9 cut(s) 281, 688, 1509, 1533, 1699, 2118, 2757, 2992, 3559
MabI ACCWGGT 1 cut(s) 637
MaeI CTAG 9 cut(s) 224, 941, 1002, 2160, 2297, 2354, 2621, 3321, 3360
MaeII ACGT 4 cut(s) 921, 1747, 1942, 1966
MaeIII GTNAC 4 cut(s) 994, 1301, 2859, 3490
MalI GATC 8 cut(s) 153, 211, 342, 387, 966, 2502, 2712, 3130
MboI GATC 8 cut(s) 151, 209, 340, 385, 964, 2500, 2710, 3128
MfeI CAATTG 2 cut(s) 1575, 2610
MflI RGATCY 3 cut(s) 340, 2710, 3128
MhlI GDGCHC 4 cut(s) 379, 1089, 2820, 3463
MlsI TGGCCA 1 cut(s) 428
MluNI TGGCCA 1 cut(s) 428
MlyI GAGTC 7 cut(s) 623, 1933, 2005, 2257, 2411, 2464, 2503
MmeI TCCRAC 1 cut(s) 2949
Mox20I TGGCCA 1 cut(s) 428
Mph1103I ATGCAT 1 cut(s) 1548
MroXI GAANNNNTTC 1 cut(s) 3377
MscI TGGCCA 1 cut(s) 428
MslI CAYNNNNRTG 2 cut(s) 1098, 3186
Msp20I TGGCCA 1 cut(s) 428
MspA1I CMGCKG 1 cut(s) 2767
MspCI CTTAAG 2 cut(s) 395, 2243
MspR9I CCNGG 2 cut(s) 639, 2338
MunI CAATTG 2 cut(s) 1575, 2610
Mva1269I GAATGC 3 cut(s) 931, 1173, 2983
MvaI CCWGG 2 cut(s) 639, 2338
MvnI CGCG 1 cut(s) 90
MwoI GCNNNNNNNGC 2 cut(s) 254, 300
NcoI CCATGG 2 cut(s) 304, 3281
NdeI CATATG 1 cut(s) 3076
NdeII GATC 8 cut(s) 151, 209, 340, 385, 964, 2500, 2710, 3128
NlaIV GGNNCC 4 cut(s) 578, 1201, 1902, 2601
NmuCI GTSAC 1 cut(s) 2859
NsbI TGCGCA 1 cut(s) 2104
NsiI ATGCAT 1 cut(s) 1548
NspI RCATGY 4 cut(s) 353, 1103, 1353, 1658
NspV TTCGAA 1 cut(s) 2632
PaeI GCATGC 1 cut(s) 1103
PaeR7I CTCGAG 3 cut(s) 161, 930, 2281
PagI TCATGA 1 cut(s) 2935
PasI CCCWGGG 1 cut(s) 2337
PceI AGGCCT 1 cut(s) 1014
PciI ACATGT 2 cut(s) 349, 1654
PctI GAATGC 3 cut(s) 931, 1173, 2983
PdmI GAANNNNTTC 1 cut(s) 3377
PfeI GAWTC 9 cut(s) 550, 557, 632, 987, 1425, 1832, 2393, 2804, 3080
PflFI GACNNNGTC 1 cut(s) 2872
PkrI GCNGC 7 cut(s) 404, 442, 457, 742, 2306, 2761, 3294
PleI GAGTC 7 cut(s) 622, 1932, 2004, 2256, 2410, 2463, 2502
PpsI GAGTC 7 cut(s) 622, 1932, 2004, 2256, 2410, 2463, 2502
Ppu21I YACGTR 1 cut(s) 1748
PpuMI RGGWCCY 1 cut(s) 1200
PscI ACATGT 2 cut(s) 349, 1654
PshAI GACNNNNGTC 1 cut(s) 1923
Psp124BI GAGCTC 3 cut(s) 1089, 2820, 3463
Psp5II RGGWCCY 1 cut(s) 1200
Psp6I CCWGG 2 cut(s) 637, 2336
PspGI CCWGG 2 cut(s) 637, 2336
PspN4I GGNNCC 4 cut(s) 578, 1201, 1902, 2601
PspPI GGNCC 3 cut(s) 577, 1200, 1959
PspPPI RGGWCCY 1 cut(s) 1200
PsuI RGATCY 3 cut(s) 340, 2710, 3128
PsyI GACNNNGTC 1 cut(s) 2872
PvuII CAGCTG 1 cut(s) 2767
RsaI GTAC 8 cut(s) 53, 354, 895, 1886, 2344, 2368, 2584, 2601
RsaNI GTAC 8 cut(s) 52, 353, 894, 1885, 2343, 2367, 2583, 2600
RseI CAYNNNNRTG 2 cut(s) 1098, 3186
SacI GAGCTC 3 cut(s) 1089, 2820, 3463
SatI GCNGC 7 cut(s) 403, 441, 456, 741, 2305, 2760, 3293
Sau3AI GATC 8 cut(s) 151, 209, 340, 385, 964, 2500, 2710, 3128
Sau96I GGNCC 3 cut(s) 577, 1200, 1959
SchI GAGTC 7 cut(s) 623, 1933, 2005, 2257, 2411, 2464, 2503
ScrFI CCNGG 2 cut(s) 639, 2338
SduI GDGCHC 4 cut(s) 379, 1089, 2820, 3463
SexAI ACCWGGT 1 cut(s) 637
SfaNI GCATC 9 cut(s) 281, 688, 1509, 1533, 1699, 2118, 2757, 2992, 3559
Sfr274I CTCGAG 3 cut(s) 161, 930, 2281
SfuI TTCGAA 1 cut(s) 2632
SinI GGWCC 2 cut(s) 1200, 1959
SlaI CTCGAG 3 cut(s) 161, 930, 2281
SmiMI CAYNNNNRTG 2 cut(s) 1098, 3186
SmlI CTYRAG 8 cut(s) 161, 395, 930, 1019, 1082, 2243, 2281, 2925
SmoI CTYRAG 8 cut(s) 161, 395, 930, 1019, 1082, 2243, 2281, 2925
SpeI ACTAGT 2 cut(s) 223, 3320
SphI GCATGC 1 cut(s) 1103
SseBI AGGCCT 1 cut(s) 1014
SsiI CCGC 2 cut(s) 255, 1421
SspI AATATT 2 cut(s) 2005, 2231
SspMI CTAG 9 cut(s) 224, 941, 1002, 2160, 2297, 2354, 2621, 3321, 3360
SstI GAGCTC 3 cut(s) 1089, 2820, 3463
StuI AGGCCT 1 cut(s) 1014
StyD4I CCNGG 2 cut(s) 637, 2336
StyI CCWWGG 4 cut(s) 304, 976, 2092, 3281
TaaI ACNGT 6 cut(s) 1889, 1908, 2350, 2872, 3517, 3531
TaiI ACGT 4 cut(s) 924, 1750, 1945, 1969
TaqI TCGA 8 cut(s) 162, 204, 212, 931, 985, 2282, 2632, 3041
TaqII GACCGA 1 cut(s) 2738
TatI WGTACW 1 cut(s) 2366
TfiI GAWTC 9 cut(s) 550, 557, 632, 987, 1425, 1832, 2393, 2804, 3080
TseFI GTSAC 1 cut(s) 2859
TseI GCWGC 7 cut(s) 402, 440, 455, 740, 2304, 2759, 3292
Tsp45I GTSAC 1 cut(s) 2859
TspGWI ACGGA 5 cut(s) 797, 846, 1199, 1522, 1549
Tth111I GACNNNGTC 1 cut(s) 2872
Vha464I CTTAAG 2 cut(s) 395, 2243
VneI GTGCAC 1 cut(s) 375
VpaK11BI GGWCC 2 cut(s) 1200, 1959
XbaI TCTAGA 1 cut(s) 2296
XceI RCATGY 4 cut(s) 353, 1103, 1353, 1658
XcmI CCANNNNNNNNNTGG 1 cut(s) 2469
XhoI CTCGAG 3 cut(s) 161, 930, 2281
XmiI GTMKAC 1 cut(s) 2659
XmnI GAANNNNTTC 1 cut(s) 3377
XspI CTAG 9 cut(s) 224, 941, 1002, 2160, 2297, 2354, 2621, 3321, 3360
Zsp2I ATGCAT 1 cut(s) 1548
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.