Disease resistance protein (TIR-NBS-LRR class)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 57 - 234 | 1e-53 | TIR domain |
| TIR_2 | PF13676 | 60 - 155 | 6e-14 | TIR domain |
| NB-ARC | PF00931 | 255 - 418 | 3.9e-09 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 488 - 558 | 1.7e-22 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_8 | PF13855 | 840 - 897 | 6.5e-06 | Leucine rich repeat |
| LRR_13 | PF23286 | 886 - 1066 | 4.3e-15 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 892 - 972 | 6.6e-13 | Leucine-rich repeat region |
| C-JID | PF20160 | 1137 - 1268 | 3.6e-12 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 495, 1127 |
| AarI | CACCTGC | 1 cut(s) | 1285 |
| Acc16I | TGCGCA | 1 cut(s) | 3324 |
| Acc36I | ACCTGC | 2 cut(s) | 1285, 2264 |
| Acc65I | GGTACC | 1 cut(s) | 899 |
| AccB1I | GGYRCC | 2 cut(s) | 899, 3174 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1645 |
| AccBSI | CCGCTC | 1 cut(s) | 3118 |
| AccI | GTMKAC | 1 cut(s) | 2172 |
| AccII | CGCG | 2 cut(s) | 200, 1665 |
| AccIII | TCCGGA | 2 cut(s) | 2152, 2710 |
| AciI | CCGC | 9 cut(s) | 200, 306, 375, 721, 1663, 3118, 3900, 3928, 3976 |
| AclI | AACGTT | 2 cut(s) | 1799, 3367 |
| AcoI | YGGCCR | 3 cut(s) | 549, 3805, 3925 |
| AcuI | CTGAAG | 6 cut(s) | 735, 1220, 1409, 2097, 3313, 3659 |
| AcvI | CACGTG | 1 cut(s) | 3661 |
| AcyI | GRCGYC | 1 cut(s) | 3871 |
| AdeI | CACNNNGTG | 1 cut(s) | 1633 |
| AfaI | GTAC | 8 cut(s) | 474, 901, 1436, 1675, 1761, 2297, 2356, 3613 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 1565, 1645, 3538, 3630, 3934, 3982 |
| AflII | CTTAAG | 2 cut(s) | 1834, 2807 |
| AflIII | ACRYGT | 4 cut(s) | 433, 469, 3660, 3850 |
| AhlI | ACTAGT | 1 cut(s) | 1165 |
| AjiI | CACGTC | 1 cut(s) | 1057 |
| AjnI | CCWGG | 6 cut(s) | 1108, 1807, 1988, 2070, 3220, 4015 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 722, 754, 1086, 1118 |
| AleI | CACNNNNGTG | 1 cut(s) | 1710 |
| Alw21I | GWGCWC | 2 cut(s) | 2945, 3141 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1384, 3097, 3209 |
| Ama87I | CYCGRG | 2 cut(s) | 618, 1134 |
| Aor13HI | TCCGGA | 2 cut(s) | 2152, 2710 |
| AoxI | GGCC | 6 cut(s) | 549, 1105, 2020, 3805, 3925, 3973 |
| ApeKI | GCWGC | 8 cut(s) | 236, 578, 1256, 1310, 1541, 2776, 2970, 3879 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 3009, 3041, 3208, 3240, 3988, 4020 |
| AseI | ATTAAT | 1 cut(s) | 53 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 765, 1233, 3837 |
| Asp718I | GGTACC | 1 cut(s) | 899 |
| AspLEI | GCGC | 3 cut(s) | 200, 1695, 3325 |
| AspS9I | GGNCC | 7 cut(s) | 37, 77, 302, 1106, 2478, 3252, 3973 |
| AsuC2I | CCSGG | 1 cut(s) | 3971 |
| AsuHPI | GGTGA | 3 cut(s) | 1724, 3302, 3596 |
| AsuNHI | GCTAGC | 1 cut(s) | 3896 |
| AvaI | CYCGRG | 2 cut(s) | 618, 1134 |
| AvaII | GGWCC | 5 cut(s) | 37, 77, 302, 2478, 3252 |
| BaeGI | GKGCMC | 2 cut(s) | 2565, 3179 |
| BalI | TGGCCA | 2 cut(s) | 551, 3807 |
| BamHI | GGATCC | 1 cut(s) | 1804 |
| BanI | GGYRCC | 2 cut(s) | 899, 3174 |
| BanII | GRGCYC | 1 cut(s) | 3090 |
| BbrPI | CACGTG | 1 cut(s) | 3661 |
| BbsI | GAAGAC | 2 cut(s) | 723, 3140 |
| Bbv12I | GWGCWC | 2 cut(s) | 2945, 3141 |
| BbvI | GCAGC | 8 cut(s) | 223, 590, 1243, 1297, 1528, 2763, 2957, 3891 |
| BciT130I | CCWGG | 6 cut(s) | 1110, 1809, 1990, 2072, 3222, 4017 |
| BciVI | GTATCC | 1 cut(s) | 196 |
| BclI | TGATCA | 1 cut(s) | 345 |
| BcnI | CCSGG | 1 cut(s) | 3971 |
| BcuI | ACTAGT | 1 cut(s) | 1165 |
| BfmI | CTRYAG | 4 cut(s) | 780, 996, 1311, 2738 |
| BfrI | CTTAAG | 2 cut(s) | 1834, 2807 |
| BfuAI | ACCTGC | 2 cut(s) | 1285, 2264 |
| BfuI | GTATCC | 1 cut(s) | 196 |
| BmcAI | AGTACT | 2 cut(s) | 1675, 2356 |
| Bme1390I | CCNGG | 7 cut(s) | 1110, 1809, 1990, 2072, 3222, 3971, 4017 |
| Bme18I | GGWCC | 5 cut(s) | 37, 77, 302, 2478, 3252 |
| BmeT110I | CYCGRG | 2 cut(s) | 618, 1134 |
| BmgBI | CACGTC | 1 cut(s) | 1057 |
| BmgT120I | GGNCC | 7 cut(s) | 37, 77, 302, 1106, 2478, 3252, 3973 |
| BmiI | GGNNCC | 9 cut(s) | 39, 304, 901, 1022, 1806, 2724, 3089, 3176, 3974 |
| BmrFI | CCNGG | 7 cut(s) | 1110, 1809, 1990, 2072, 3222, 3971, 4017 |
| BmrI | ACTGGG | 2 cut(s) | 2598, 3639 |
| BmsI | GCATC | 8 cut(s) | 377, 817, 1614, 1888, 2884, 2957, 3078, 3310 |
| BmtI | GCTAGC | 1 cut(s) | 3900 |
| BmuI | ACTGGG | 2 cut(s) | 2598, 3639 |
| BpiI | GAAGAC | 2 cut(s) | 723, 3140 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2873, 2905 |
| BpuEI | CTTGAG | 5 cut(s) | 302, 1985, 2051, 2900, 3206 |
| BpuMI | CCSGG | 1 cut(s) | 3971 |
| Bsa29I | ATCGAT | 1 cut(s) | 2049 |
| BsaAI | YACGTR | 1 cut(s) | 3661 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1722 |
| BsaHI | GRCGYC | 1 cut(s) | 3871 |
| BsaI | GGTCTC | 4 cut(s) | 2442, 3047, 3625, 3790 |
| BsaWI | WCCGGW | 3 cut(s) | 2152, 2710, 3377 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 282, 312, 3046, 3076, 3626, 3656 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 1565, 1645, 3538, 3630, 3934, 3982 |
| Bse1I | ACTGG | 7 cut(s) | 411, 703, 1148, 2593, 3091, 3134, 3634 |
| Bse3DI | GCAATG | 1 cut(s) | 2467 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1722 |
| BseAI | TCCGGA | 2 cut(s) | 2152, 2710 |
| BseBI | CCWGG | 6 cut(s) | 1110, 1809, 1990, 2072, 3222, 4017 |
| BseCI | ATCGAT | 1 cut(s) | 2049 |
| BseJI | GATNNNNATC | 1 cut(s) | 1722 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 1565, 1645, 3538, 3630, 3934, 3982 |
| BseMI | GCAATG | 1 cut(s) | 2467 |
| BseMII | CTCAG | 5 cut(s) | 199, 2536, 2600, 3089, 3277 |
| BseNI | ACTGG | 7 cut(s) | 411, 703, 1148, 2593, 3091, 3134, 3634 |
| BseRI | GAGGAG | 3 cut(s) | 303, 921, 2735 |
| BseSI | GKGCMC | 2 cut(s) | 2565, 3179 |
| BseXI | GCAGC | 8 cut(s) | 223, 590, 1243, 1297, 1528, 2763, 2957, 3891 |
| BseYI | CCCAGC | 1 cut(s) | 3065 |
| BsgI | GTGCAG | 2 cut(s) | 2292, 3195 |
| Bsh1236I | CGCG | 2 cut(s) | 200, 1665 |
| BshFI | GGCC | 6 cut(s) | 551, 1107, 2022, 3807, 3927, 3975 |
| BshNI | GGYRCC | 2 cut(s) | 899, 3174 |
| BshVI | ATCGAT | 1 cut(s) | 2049 |
| BsiHKAI | GWGCWC | 2 cut(s) | 2945, 3141 |
| BsiHKCI | CYCGRG | 2 cut(s) | 618, 1134 |
| BsiSI | CCGG | 5 cut(s) | 1685, 2153, 2711, 3378, 3970 |
| BslFI | GGGAC | 4 cut(s) | 23, 980, 2773, 3668 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 1565, 1645, 3538, 3630, 3934, 3982 |
| BsmBI | CGTCTC | 1 cut(s) | 3862 |
| BsmFI | GGGAC | 4 cut(s) | 23, 980, 2773, 3668 |
| BsmI | GAATGC | 2 cut(s) | 416, 1317 |
| BsnI | GGCC | 6 cut(s) | 551, 1107, 2022, 3807, 3927, 3975 |
| Bso31I | GGTCTC | 4 cut(s) | 2442, 3047, 3625, 3790 |
| BsoBI | CYCGRG | 2 cut(s) | 618, 1134 |
| Bsp1286I | GDGCHC | 5 cut(s) | 2565, 2945, 3090, 3141, 3179 |
| Bsp13I | TCCGGA | 2 cut(s) | 2152, 2710 |
| Bsp1407I | TGTACA | 2 cut(s) | 1434, 3611 |
| Bsp19I | CCATGG | 3 cut(s) | 2504, 3748, 3802 |
| BspACI | CCGC | 9 cut(s) | 200, 306, 375, 721, 1663, 3118, 3900, 3928, 3976 |
| BspANI | GGCC | 6 cut(s) | 551, 1107, 2022, 3807, 3927, 3975 |
| BspCNI | CTCAG | 5 cut(s) | 198, 2535, 2601, 3090, 3276 |
| BspDI | ATCGAT | 1 cut(s) | 2049 |
| BspEI | TCCGGA | 2 cut(s) | 2152, 2710 |
| BspFNI | CGCG | 2 cut(s) | 200, 1665 |
| BspLI | GGNNCC | 9 cut(s) | 39, 304, 901, 1022, 1806, 2724, 3089, 3176, 3974 |
| BspMAI | CTGCAG | 2 cut(s) | 1315, 2742 |
| BspMI | ACCTGC | 2 cut(s) | 1285, 2264 |
| BspOI | GCTAGC | 1 cut(s) | 3900 |
| BspQI | GCTCTTC | 3 cut(s) | 1247, 1683, 2766 |
| BspT107I | GGYRCC | 2 cut(s) | 899, 3174 |
| BspTI | CTTAAG | 2 cut(s) | 1834, 2807 |
| BspTNI | GGTCTC | 4 cut(s) | 2442, 3047, 3625, 3790 |
| BsrBI | CCGCTC | 1 cut(s) | 3118 |
| BsrDI | GCAATG | 1 cut(s) | 2467 |
| BsrGI | TGTACA | 2 cut(s) | 1434, 3611 |
| BsrI | ACTGG | 7 cut(s) | 411, 703, 1148, 2593, 3091, 3134, 3634 |
| BssNAI | GTATAC | 1 cut(s) | 2173 |
| BssNI | GRCGYC | 1 cut(s) | 3871 |
| BssT1I | CCWWGG | 4 cut(s) | 2194, 2504, 3748, 3802 |
| Bst1107I | GTATAC | 1 cut(s) | 2173 |
| Bst2UI | CCWGG | 6 cut(s) | 1110, 1809, 1990, 2072, 3222, 4017 |
| Bst4CI | ACNGT | 8 cut(s) | 869, 927, 1028, 1386, 2560, 3193, 3923, 4034 |
| Bst6I | CTCTTC | 7 cut(s) | 139, 853, 1239, 1247, 1683, 2766, 3242 |
| BstACI | GRCGYC | 1 cut(s) | 3871 |
| BstAFI | CTTAAG | 2 cut(s) | 1834, 2807 |
| BstAUI | TGTACA | 2 cut(s) | 1434, 3611 |
| BstBAI | YACGTR | 1 cut(s) | 3661 |
| BstC8I | GCNNGC | 5 cut(s) | 91, 822, 1315, 3529, 3898 |
| BstDEI | CTNAG | 8 cut(s) | 185, 1850, 2054, 2389, 2522, 2609, 3098, 3263 |
| BstDSI | CCRYGG | 4 cut(s) | 2504, 3748, 3802, 3922 |
| BstFNI | CGCG | 2 cut(s) | 200, 1665 |
| BstHHI | GCGC | 3 cut(s) | 200, 1695, 3325 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 117, 374, 1690, 1773, 1984, 3006, 3429, 3472, 3879 |
| BstNI | CCWGG | 6 cut(s) | 1110, 1809, 1990, 2072, 3222, 4017 |
| BstNSI | RCATGY | 4 cut(s) | 437, 473, 1497, 3854 |
| BstSCI | CCNGG | 7 cut(s) | 1108, 1807, 1988, 2070, 3220, 3969, 4015 |
| BstSFI | CTRYAG | 4 cut(s) | 780, 996, 1311, 2738 |
| BstSLI | GKGCMC | 2 cut(s) | 2565, 3179 |
| BstUI | CGCG | 2 cut(s) | 200, 1665 |
| BstV1I | GCAGC | 8 cut(s) | 223, 590, 1243, 1297, 1528, 2763, 2957, 3891 |
| BstV2I | GAAGAC | 2 cut(s) | 723, 3140 |
| BstX2I | RGATCY | 3 cut(s) | 460, 1804, 3446 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 2071, 2433 |
| BstYI | RGATCY | 3 cut(s) | 460, 1804, 3446 |
| BstZ17I | GTATAC | 1 cut(s) | 2173 |
| Bsu15I | ATCGAT | 1 cut(s) | 2049 |
| BsuI | GTATCC | 1 cut(s) | 196 |
| BsuRI | GGCC | 6 cut(s) | 551, 1107, 2022, 3807, 3927, 3975 |
| BsuTUI | ATCGAT | 1 cut(s) | 2049 |
| BtgI | CCRYGG | 4 cut(s) | 2504, 3748, 3802, 3922 |
| BtrI | CACGTC | 1 cut(s) | 1057 |
| BtsIMutI | CAGTG | 5 cut(s) | 865, 2565, 3141, 3198, 3210 |
| BveI | ACCTGC | 2 cut(s) | 1285, 2264 |
| Cac8I | GCNNGC | 5 cut(s) | 91, 822, 1315, 3529, 3898 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1384, 3097, 3209 |
| CfoI | GCGC | 3 cut(s) | 200, 1695, 3325 |
| Cfr13I | GGNCC | 7 cut(s) | 37, 77, 302, 1106, 2478, 3252, 3973 |
| ClaI | ATCGAT | 1 cut(s) | 2049 |
| CseI | GACGC | 1 cut(s) | 3879 |
| Csp6I | GTAC | 8 cut(s) | 473, 900, 1435, 1674, 1760, 2296, 2355, 3612 |
| CviQI | GTAC | 8 cut(s) | 473, 900, 1435, 1674, 1760, 2296, 2355, 3612 |
| DdeI | CTNAG | 8 cut(s) | 185, 1850, 2054, 2389, 2522, 2609, 3098, 3263 |
| DraI | TTTAAA | 1 cut(s) | 1935 |
| DraIII | CACNNNGTG | 1 cut(s) | 1633 |
| EaeI | YGGCCR | 3 cut(s) | 549, 3805, 3925 |
| Eam1104I | CTCTTC | 7 cut(s) | 139, 853, 1239, 1247, 1683, 2766, 3242 |
| EarI | CTCTTC | 7 cut(s) | 139, 853, 1239, 1247, 1683, 2766, 3242 |
| Eco130I | CCWWGG | 4 cut(s) | 2194, 2504, 3748, 3802 |
| Eco24I | GRGCYC | 1 cut(s) | 3090 |
| Eco31I | GGTCTC | 4 cut(s) | 2442, 3047, 3625, 3790 |
| Eco47I | GGWCC | 5 cut(s) | 37, 77, 302, 2478, 3252 |
| Eco57I | CTGAAG | 6 cut(s) | 735, 1220, 1409, 2097, 3313, 3659 |
| Eco72I | CACGTG | 1 cut(s) | 3661 |
| Eco88I | CYCGRG | 2 cut(s) | 618, 1134 |
| EcoO109I | RGGNCCY | 1 cut(s) | 37 |
| EcoRI | GAATTC | 1 cut(s) | 2384 |
| EcoRII | CCWGG | 6 cut(s) | 1108, 1807, 1988, 2070, 3220, 4015 |
| EcoT14I | CCWWGG | 4 cut(s) | 2194, 2504, 3748, 3802 |
| EcoT22I | ATGCAT | 2 cut(s) | 370, 3301 |
| EcoT38I | GRGCYC | 1 cut(s) | 3090 |
| ErhI | CCWWGG | 4 cut(s) | 2194, 2504, 3748, 3802 |
| Esp3I | CGTCTC | 1 cut(s) | 3862 |
| FaqI | GGGAC | 4 cut(s) | 23, 980, 2773, 3668 |
| FauI | CCCGC | 1 cut(s) | 313 |
| FauNDI | CATATG | 2 cut(s) | 1619, 1983 |
| FbaI | TGATCA | 1 cut(s) | 345 |
| FblI | GTMKAC | 1 cut(s) | 2172 |
| FriOI | GRGCYC | 1 cut(s) | 3090 |
| FspAI | RTGCGCAY | 1 cut(s) | 3324 |
| FspI | TGCGCA | 1 cut(s) | 3324 |
| GlaI | GCGC | 3 cut(s) | 199, 1694, 3324 |
| GsaI | CCCAGC | 1 cut(s) | 3069 |
| HaeIII | GGCC | 6 cut(s) | 551, 1107, 2022, 3807, 3927, 3975 |
| HapII | CCGG | 5 cut(s) | 1685, 2153, 2711, 3378, 3970 |
| HgaI | GACGC | 1 cut(s) | 3879 |
| HhaI | GCGC | 3 cut(s) | 200, 1695, 3325 |
| Hin1I | GRCGYC | 1 cut(s) | 3871 |
| Hin6I | GCGC | 3 cut(s) | 198, 1693, 3323 |
| HinP1I | GCGC | 3 cut(s) | 198, 1693, 3323 |
| HincII | GTYRAC | 2 cut(s) | 1009, 1789 |
| HindII | GTYRAC | 2 cut(s) | 1009, 1789 |
| HindIII | AAGCTT | 3 cut(s) | 564, 2315, 3464 |
| HpaI | GTTAAC | 1 cut(s) | 1789 |
| HpaII | CCGG | 5 cut(s) | 1685, 2153, 2711, 3378, 3970 |
| HphI | GGTGA | 3 cut(s) | 1724, 3302, 3596 |
| Hpy99I | CGWCG | 2 cut(s) | 1055, 1058 |
| HpyCH4III | ACNGT | 8 cut(s) | 869, 927, 1028, 1386, 2560, 3193, 3923, 4034 |
| HpyCH4IV | ACGT | 4 cut(s) | 1056, 1799, 3367, 3660 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 117, 374, 1690, 1773, 1984, 3006, 3429, 3472, 3879 |
| HpyF3I | CTNAG | 8 cut(s) | 185, 1850, 2054, 2389, 2522, 2609, 3098, 3263 |
| HpySE526I | ACGT | 4 cut(s) | 1056, 1799, 3367, 3660 |
| Hsp92I | GRCGYC | 1 cut(s) | 3871 |
| HspAI | GCGC | 3 cut(s) | 198, 1693, 3323 |
| Kpn2I | TCCGGA | 2 cut(s) | 2152, 2710 |
| KpnI | GGTACC | 1 cut(s) | 903 |
| Ksp22I | TGATCA | 1 cut(s) | 345 |
| KspAI | GTTAAC | 1 cut(s) | 1789 |
| LguI | GCTCTTC | 3 cut(s) | 1247, 1683, 2766 |
| Lsp1109I | GCAGC | 8 cut(s) | 223, 590, 1243, 1297, 1528, 2763, 2957, 3891 |
| LweI | GCATC | 8 cut(s) | 377, 817, 1614, 1888, 2884, 2957, 3078, 3310 |
| MaeII | ACGT | 4 cut(s) | 1056, 1799, 3367, 3660 |
| MaeIII | GTNAC | 4 cut(s) | 1925, 3205, 3853, 4004 |
| MbiI | CCGCTC | 1 cut(s) | 3118 |
| MfeI | CAATTG | 1 cut(s) | 2787 |
| MflI | RGATCY | 3 cut(s) | 460, 1804, 3446 |
| MhlI | GDGCHC | 5 cut(s) | 2565, 2945, 3090, 3141, 3179 |
| MlsI | TGGCCA | 2 cut(s) | 551, 3807 |
| MluNI | TGGCCA | 2 cut(s) | 551, 3807 |
| MlyI | GAGTC | 5 cut(s) | 54, 837, 1153, 2001, 3211 |
| MmeI | TCCRAC | 3 cut(s) | 280, 1782, 2062 |
| Mox20I | TGGCCA | 2 cut(s) | 551, 3807 |
| Mph1103I | ATGCAT | 2 cut(s) | 370, 3301 |
| MroI | TCCGGA | 2 cut(s) | 2152, 2710 |
| MroXI | GAANNNNTTC | 3 cut(s) | 765, 1233, 3837 |
| MscI | TGGCCA | 2 cut(s) | 551, 3807 |
| MslI | CAYNNNNRTG | 9 cut(s) | 231, 1251, 1586, 1622, 1710, 1823, 1866, 2582, 3555 |
| Msp20I | TGGCCA | 2 cut(s) | 551, 3807 |
| MspCI | CTTAAG | 2 cut(s) | 1834, 2807 |
| MspI | CCGG | 5 cut(s) | 1685, 2153, 2711, 3378, 3970 |
| MspR9I | CCNGG | 7 cut(s) | 1110, 1809, 1990, 2072, 3222, 3971, 4017 |
| MunI | CAATTG | 1 cut(s) | 2787 |
| Mva1269I | GAATGC | 2 cut(s) | 416, 1317 |
| MvaI | CCWGG | 6 cut(s) | 1110, 1809, 1990, 2072, 3222, 4017 |
| MvnI | CGCG | 2 cut(s) | 200, 1665 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 117, 374, 1690, 1773, 1984, 3006, 3429, 3472, 3879 |
| NciI | CCSGG | 1 cut(s) | 3971 |
| NcoI | CCATGG | 3 cut(s) | 2504, 3748, 3802 |
| NdeI | CATATG | 2 cut(s) | 1619, 1983 |
| NheI | GCTAGC | 1 cut(s) | 3896 |
| NlaIV | GGNNCC | 9 cut(s) | 39, 304, 901, 1022, 1806, 2724, 3089, 3176, 3974 |
| NmeAIII | GCCGAG | 1 cut(s) | 3855 |
| NmuCI | GTSAC | 2 cut(s) | 3205, 4004 |
| NsbI | TGCGCA | 1 cut(s) | 3324 |
| NsiI | ATGCAT | 2 cut(s) | 370, 3301 |
| NspI | RCATGY | 4 cut(s) | 437, 473, 1497, 3854 |
| OliI | CACNNNNGTG | 1 cut(s) | 1710 |
| PaeR7I | CTCGAG | 1 cut(s) | 1134 |
| PaqCI | CACCTGC | 1 cut(s) | 1285 |
| PciI | ACATGT | 3 cut(s) | 433, 469, 3850 |
| PciSI | GCTCTTC | 3 cut(s) | 1247, 1683, 2766 |
| PctI | GAATGC | 2 cut(s) | 416, 1317 |
| PdmI | GAANNNNTTC | 3 cut(s) | 765, 1233, 3837 |
| PflFI | GACNNNGTC | 1 cut(s) | 3193 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1645 |
| PfoI | TCCNGGA | 2 cut(s) | 1807, 4015 |
| PleI | GAGTC | 5 cut(s) | 54, 837, 1153, 2001, 3211 |
| PmaCI | CACGTG | 1 cut(s) | 3661 |
| PmlI | CACGTG | 1 cut(s) | 3661 |
| PpsI | GAGTC | 5 cut(s) | 54, 837, 1153, 2001, 3211 |
| Ppu21I | YACGTR | 1 cut(s) | 3661 |
| PpuMI | RGGWCCY | 1 cut(s) | 37 |
| PscI | ACATGT | 3 cut(s) | 433, 469, 3850 |
| PshBI | ATTAAT | 1 cut(s) | 53 |
| PsiI | TTATAA | 2 cut(s) | 495, 1127 |
| Psp1406I | AACGTT | 2 cut(s) | 1799, 3367 |
| Psp5II | RGGWCCY | 1 cut(s) | 37 |
| Psp6I | CCWGG | 6 cut(s) | 1108, 1807, 1988, 2070, 3220, 4015 |
| PspCI | CACGTG | 1 cut(s) | 3661 |
| PspFI | CCCAGC | 1 cut(s) | 3065 |
| PspGI | CCWGG | 6 cut(s) | 1108, 1807, 1988, 2070, 3220, 4015 |
| PspN4I | GGNNCC | 9 cut(s) | 39, 304, 901, 1022, 1806, 2724, 3089, 3176, 3974 |
| PspPI | GGNCC | 7 cut(s) | 37, 77, 302, 1106, 2478, 3252, 3973 |
| PspPPI | RGGWCCY | 1 cut(s) | 37 |
| PstI | CTGCAG | 2 cut(s) | 1315, 2742 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1384, 3097, 3209 |
| PsuI | RGATCY | 3 cut(s) | 460, 1804, 3446 |
| PsyI | GACNNNGTC | 1 cut(s) | 3193 |
| RsaI | GTAC | 8 cut(s) | 474, 901, 1436, 1675, 1761, 2297, 2356, 3613 |
| RsaNI | GTAC | 8 cut(s) | 473, 900, 1435, 1674, 1760, 2296, 2355, 3612 |
| RseI | CAYNNNNRTG | 9 cut(s) | 231, 1251, 1586, 1622, 1710, 1823, 1866, 2582, 3555 |
| SapI | GCTCTTC | 3 cut(s) | 1247, 1683, 2766 |
| Sau96I | GGNCC | 7 cut(s) | 37, 77, 302, 1106, 2478, 3252, 3973 |
| ScaI | AGTACT | 2 cut(s) | 1675, 2356 |
| SchI | GAGTC | 5 cut(s) | 54, 837, 1153, 2001, 3211 |
| ScrFI | CCNGG | 7 cut(s) | 1110, 1809, 1990, 2072, 3222, 3971, 4017 |
| SduI | GDGCHC | 5 cut(s) | 2565, 2945, 3090, 3141, 3179 |
| SfaNI | GCATC | 8 cut(s) | 377, 817, 1614, 1888, 2884, 2957, 3078, 3310 |
| SfcI | CTRYAG | 4 cut(s) | 780, 996, 1311, 2738 |
| Sfr274I | CTCGAG | 1 cut(s) | 1134 |
| SinI | GGWCC | 5 cut(s) | 37, 77, 302, 2478, 3252 |
| SlaI | CTCGAG | 1 cut(s) | 1134 |
| SmiMI | CAYNNNNRTG | 9 cut(s) | 231, 1251, 1586, 1622, 1710, 1823, 1866, 2582, 3555 |
| SmlI | CTYRAG | 8 cut(s) | 281, 1134, 1834, 2000, 2030, 2807, 2879, 3185 |
| SmoI | CTYRAG | 8 cut(s) | 281, 1134, 1834, 2000, 2030, 2807, 2879, 3185 |
| SpeI | ACTAGT | 1 cut(s) | 1165 |
| SsiI | CCGC | 9 cut(s) | 200, 306, 375, 721, 1663, 3118, 3900, 3928, 3976 |
| StyD4I | CCNGG | 7 cut(s) | 1108, 1807, 1988, 2070, 3220, 3969, 4015 |
| StyI | CCWWGG | 4 cut(s) | 2194, 2504, 3748, 3802 |
| TaaI | ACNGT | 8 cut(s) | 869, 927, 1028, 1386, 2560, 3193, 3923, 4034 |
| TaiI | ACGT | 4 cut(s) | 1059, 1802, 3370, 3663 |
| TaqI | TCGA | 7 cut(s) | 324, 991, 1050, 1117, 1135, 2049, 2495 |
| TaqII | GACCGA | 1 cut(s) | 3269 |
| TatI | WGTACW | 5 cut(s) | 1434, 1673, 1759, 2354, 3611 |
| TauI | GCSGC | 3 cut(s) | 3121, 3930, 3978 |
| TscAI | CASTG | 5 cut(s) | 872, 2565, 3141, 3198, 3210 |
| TseFI | GTSAC | 2 cut(s) | 3205, 4004 |
| TseI | GCWGC | 8 cut(s) | 236, 578, 1256, 1310, 1541, 2776, 2970, 3879 |
| Tsp45I | GTSAC | 2 cut(s) | 3205, 4004 |
| TspGWI | ACGGA | 5 cut(s) | 127, 262, 331, 554, 855 |
| TspRI | CASTG | 5 cut(s) | 872, 2565, 3141, 3198, 3210 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3193 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1645 |
| Vha464I | CTTAAG | 2 cut(s) | 1834, 2807 |
| VpaK11BI | GGWCC | 5 cut(s) | 37, 77, 302, 2478, 3252 |
| VspI | ATTAAT | 1 cut(s) | 53 |
| XceI | RCATGY | 4 cut(s) | 437, 473, 1497, 3854 |
| XhoI | CTCGAG | 1 cut(s) | 1134 |
| XmiI | GTMKAC | 1 cut(s) | 2172 |
| XmnI | GAANNNNTTC | 3 cut(s) | 765, 1233, 3837 |
| ZrmI | AGTACT | 2 cut(s) | 1675, 2356 |
| Zsp2I | ATGCAT | 2 cut(s) | 370, 3301 |