Disease resistance protein (TIR-NBS-LRR class)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 16 - 192 | 1.4e-53 | TIR domain |
| TIR_2 | PF13676 | 18 - 140 | 1.9e-14 | TIR domain |
| NB-ARC | PF00931 | 219 - 373 | 8e-16 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 445 - 514 | 5.3e-20 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_13 | PF23286 | 804 - 985 | 5.3e-14 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 810 - 879 | 4.3e-09 | Leucine-rich repeat region |
| C-JID | PF20160 | 1064 - 1198 | 3.8e-16 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 629, 792 |
| Acc36I | ACCTGC | 2 cut(s) | 187, 3175 |
| AccB1I | GGYRCC | 1 cut(s) | 2583 |
| AccBSI | CCGCTC | 1 cut(s) | 162 |
| AccI | GTMKAC | 3 cut(s) | 29, 1489, 1580 |
| AciI | CCGC | 6 cut(s) | 82, 162, 635, 1433, 3192, 3234 |
| AclI | AACGTT | 2 cut(s) | 397, 835 |
| AclWI | GGATC | 7 cut(s) | 329, 549, 871, 1946, 2116, 2536, 2991 |
| AcsI | RAATTY | 9 cut(s) | 1209, 1258, 1721, 2138, 2548, 2635, 3046, 3128, 3201 |
| AcuI | CTGAAG | 5 cut(s) | 916, 1170, 1283, 1572, 3156 |
| AfaI | GTAC | 6 cut(s) | 655, 1754, 2026, 2158, 2366, 2706 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 860, 898, 2580, 3484 |
| AflII | CTTAAG | 6 cut(s) | 107, 155, 425, 1922, 2105, 2492 |
| AhlI | ACTAGT | 1 cut(s) | 485 |
| AjnI | CCWGG | 6 cut(s) | 903, 1558, 1676, 2579, 2979, 3325 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 954, 986 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 948, 980, 1434, 1466 |
| Alw26I | GTCTC | 8 cut(s) | 800, 1470, 1888, 2196, 2393, 2419, 2423, 3016 |
| AlwI | GGATC | 7 cut(s) | 329, 549, 871, 1946, 2116, 2536, 2991 |
| Ama87I | CYCGRG | 3 cut(s) | 2098, 2420, 2594 |
| AoxI | GGCC | 2 cut(s) | 1808, 2977 |
| ApeKI | GCWGC | 7 cut(s) | 371, 374, 1960, 2652, 2655, 2727, 2928 |
| ApoI | RAATTY | 9 cut(s) | 1209, 1258, 1721, 2138, 2548, 2635, 3046, 3128, 3201 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 810, 929, 963, 1296, 1533, 1632 |
| AspLEI | GCGC | 3 cut(s) | 1569, 1664, 2877 |
| AspS9I | GGNCC | 6 cut(s) | 176, 901, 1809, 2851, 2893, 3492 |
| AsuHPI | GGTGA | 6 cut(s) | 472, 1714, 2395, 3386, 3449, 3499 |
| AsuII | TTCGAA | 2 cut(s) | 3094, 3715 |
| AvaI | CYCGRG | 3 cut(s) | 2098, 2420, 2594 |
| AvaII | GGWCC | 5 cut(s) | 176, 901, 2851, 2893, 3492 |
| BanI | GGYRCC | 1 cut(s) | 2583 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 38, 70 |
| BbsI | GAAGAC | 1 cut(s) | 46 |
| BbvCI | CCTCAGC | 1 cut(s) | 2846 |
| BbvI | GCAGC | 7 cut(s) | 361, 383, 1972, 2639, 2642, 2714, 2915 |
| BceAI | ACGGC | 1 cut(s) | 640 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 221, 255, 524, 558, 3587, 3621 |
| BciT130I | CCWGG | 6 cut(s) | 905, 1560, 1678, 2581, 2981, 3327 |
| BciVI | GTATCC | 1 cut(s) | 1293 |
| BclI | TGATCA | 2 cut(s) | 2805, 3628 |
| BcoDI | GTCTC | 8 cut(s) | 800, 1470, 1888, 2196, 2393, 2419, 2423, 3016 |
| BcuI | ACTAGT | 1 cut(s) | 485 |
| BfaI | CTAG | 8 cut(s) | 486, 1002, 1412, 1964, 2448, 2714, 2841, 3672 |
| BfmI | CTRYAG | 5 cut(s) | 858, 1103, 1889, 2656, 2761 |
| BfoI | RGCGCY | 2 cut(s) | 1665, 2878 |
| BfrI | CTTAAG | 6 cut(s) | 107, 155, 425, 1922, 2105, 2492 |
| BfuAI | ACCTGC | 2 cut(s) | 187, 3175 |
| BfuI | GTATCC | 1 cut(s) | 1293 |
| BglII | AGATCT | 3 cut(s) | 1768, 1978, 2011 |
| BisI | GCNGC | 7 cut(s) | 372, 375, 1961, 2653, 2656, 2728, 2929 |
| BlsI | GCNGC | 7 cut(s) | 373, 376, 1962, 2654, 2657, 2729, 2930 |
| BmcAI | AGTACT | 2 cut(s) | 1754, 2158 |
| Bme1390I | CCNGG | 6 cut(s) | 905, 1560, 1678, 2581, 2981, 3327 |
| Bme18I | GGWCC | 5 cut(s) | 176, 901, 2851, 2893, 3492 |
| BmeT110I | CYCGRG | 3 cut(s) | 2098, 2420, 2594 |
| BmgT120I | GGNCC | 6 cut(s) | 176, 901, 1809, 2851, 2893, 3492 |
| BmiI | GGNNCC | 4 cut(s) | 1219, 2478, 2585, 2852 |
| BmrFI | CCNGG | 6 cut(s) | 905, 1560, 1678, 2581, 2981, 3327 |
| BpiI | GAAGAC | 1 cut(s) | 46 |
| BplI | GAGNNNNNCTC | 8 cut(s) | 2321, 2353, 2416, 2448, 2519, 2551, 3481, 3513 |
| BpmI | CTGGAG | 1 cut(s) | 1164 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2846 |
| Bpu14I | TTCGAA | 2 cut(s) | 3094, 3715 |
| BpuEI | CTTGAG | 3 cut(s) | 1677, 1793, 3573 |
| Bsa29I | ATCGAT | 3 cut(s) | 132, 144, 1941 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1596, 3087, 3381 |
| BsaI | GGTCTC | 1 cut(s) | 2196 |
| BsaJI | CCNNGG | 3 cut(s) | 1665, 1698, 3326 |
| BsaWI | WCCGGW | 1 cut(s) | 2890 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 948, 978 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 860, 898, 2580, 3484 |
| Bse1I | ACTGG | 1 cut(s) | 3648 |
| Bse3DI | GCAATG | 3 cut(s) | 2092, 3419, 3514 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1596, 3087, 3381 |
| BseBI | CCWGG | 6 cut(s) | 905, 1560, 1678, 2581, 2981, 3327 |
| BseCI | ATCGAT | 3 cut(s) | 132, 144, 1941 |
| BseDI | CCNNGG | 3 cut(s) | 1665, 1698, 3326 |
| BseGI | GGATG | 6 cut(s) | 268, 1503, 2803, 3058, 3085, 3336 |
| BseJI | GATNNNNATC | 3 cut(s) | 1596, 3087, 3381 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 860, 898, 2580, 3484 |
| BseMI | GCAATG | 3 cut(s) | 2092, 3419, 3514 |
| BseMII | CTCAG | 5 cut(s) | 1028, 1033, 1122, 2783, 2837 |
| BseNI | ACTGG | 1 cut(s) | 3648 |
| BseRI | GAGGAG | 1 cut(s) | 1682 |
| BseXI | GCAGC | 7 cut(s) | 361, 383, 1972, 2639, 2642, 2714, 2915 |
| BsgI | GTGCAG | 3 cut(s) | 2914, 2949, 3525 |
| BshFI | GGCC | 2 cut(s) | 1810, 2979 |
| BshNI | GGYRCC | 1 cut(s) | 2583 |
| BshVI | ATCGAT | 3 cut(s) | 132, 144, 1941 |
| BsiHKCI | CYCGRG | 3 cut(s) | 2098, 2420, 2594 |
| BsiSI | CCGG | 1 cut(s) | 2891 |
| BslFI | GGGAC | 6 cut(s) | 617, 874, 1762, 2588, 3620, 3636 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 860, 898, 2580, 3484 |
| BsmAI | GTCTC | 8 cut(s) | 800, 1470, 1888, 2196, 2393, 2419, 2423, 3016 |
| BsmBI | CGTCTC | 1 cut(s) | 800 |
| BsmFI | GGGAC | 6 cut(s) | 617, 874, 1762, 2588, 3620, 3636 |
| BsmI | GAATGC | 6 cut(s) | 290, 377, 591, 1126, 1191, 3064 |
| BsnI | GGCC | 2 cut(s) | 1810, 2979 |
| Bso31I | GGTCTC | 1 cut(s) | 2196 |
| BsoBI | CYCGRG | 3 cut(s) | 2098, 2420, 2594 |
| Bsp119I | TTCGAA | 2 cut(s) | 3094, 3715 |
| Bsp1407I | TGTACA | 1 cut(s) | 2024 |
| BspACI | CCGC | 6 cut(s) | 82, 162, 635, 1433, 3192, 3234 |
| BspANI | GGCC | 2 cut(s) | 1810, 2979 |
| BspCNI | CTCAG | 5 cut(s) | 1029, 1032, 1123, 2784, 2838 |
| BspDI | ATCGAT | 3 cut(s) | 132, 144, 1941 |
| BspLI | GGNNCC | 4 cut(s) | 1219, 2478, 2585, 2852 |
| BspMAI | CTGCAG | 2 cut(s) | 1893, 2660 |
| BspMI | ACCTGC | 2 cut(s) | 187, 3175 |
| BspPI | GGATC | 7 cut(s) | 329, 549, 871, 1946, 2116, 2536, 2991 |
| BspQI | GCTCTTC | 3 cut(s) | 22, 1115, 1548 |
| BspT104I | TTCGAA | 2 cut(s) | 3094, 3715 |
| BspT107I | GGYRCC | 1 cut(s) | 2583 |
| BspTI | CTTAAG | 6 cut(s) | 107, 155, 425, 1922, 2105, 2492 |
| BspTNI | GGTCTC | 1 cut(s) | 2196 |
| BsrBI | CCGCTC | 1 cut(s) | 162 |
| BsrDI | GCAATG | 3 cut(s) | 2092, 3419, 3514 |
| BsrGI | TGTACA | 1 cut(s) | 2024 |
| BsrI | ACTGG | 1 cut(s) | 3648 |
| BssECI | CCNNGG | 3 cut(s) | 1665, 1698, 3326 |
| BssNAI | GTATAC | 1 cut(s) | 1581 |
| BssT1I | CCWWGG | 1 cut(s) | 1698 |
| Bst1107I | GTATAC | 1 cut(s) | 1581 |
| Bst2UI | CCWGG | 6 cut(s) | 905, 1560, 1678, 2581, 2981, 3327 |
| Bst4CI | ACNGT | 7 cut(s) | 658, 1752, 1757, 2031, 2364, 2913, 2947 |
| Bst6I | CTCTTC | 5 cut(s) | 22, 730, 1115, 1548, 2542 |
| BstAFI | CTTAAG | 6 cut(s) | 107, 155, 425, 1922, 2105, 2492 |
| BstAUI | TGTACA | 1 cut(s) | 2024 |
| BstBI | TTCGAA | 2 cut(s) | 3094, 3715 |
| BstC8I | GCNNGC | 3 cut(s) | 438, 1808, 2873 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 2578, 3482 |
| BstF5I | GGATG | 6 cut(s) | 268, 1503, 2803, 3058, 3085, 3336 |
| BstH2I | RGCGCY | 2 cut(s) | 1665, 2878 |
| BstHHI | GCGC | 3 cut(s) | 1569, 1664, 2877 |
| BstMAI | GTCTC | 8 cut(s) | 800, 1470, 1888, 2196, 2393, 2419, 2423, 3016 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 380, 624, 1564, 1873, 2763, 3176, 3302 |
| BstNI | CCWGG | 6 cut(s) | 905, 1560, 1678, 2581, 2981, 3327 |
| BstNSI | RCATGY | 4 cut(s) | 347, 440, 1371, 1422 |
| BstSCI | CCNGG | 6 cut(s) | 903, 1558, 1676, 2579, 2979, 3325 |
| BstSFI | CTRYAG | 5 cut(s) | 858, 1103, 1889, 2656, 2761 |
| BstV1I | GCAGC | 7 cut(s) | 361, 383, 1972, 2639, 2642, 2714, 2915 |
| BstV2I | GAAGAC | 1 cut(s) | 46 |
| BstX2I | RGATCY | 5 cut(s) | 334, 1768, 1978, 2011, 2121 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2648 |
| BstYI | RGATCY | 5 cut(s) | 334, 1768, 1978, 2011, 2121 |
| BstZ17I | GTATAC | 1 cut(s) | 1581 |
| Bsu15I | ATCGAT | 3 cut(s) | 132, 144, 1941 |
| BsuI | GTATCC | 1 cut(s) | 1293 |
| BsuRI | GGCC | 2 cut(s) | 1810, 2979 |
| BsuTUI | ATCGAT | 3 cut(s) | 132, 144, 1941 |
| BtgZI | GCGATG | 1 cut(s) | 324 |
| BtsCI | GGATG | 6 cut(s) | 268, 1503, 2803, 3058, 3085, 3336 |
| BtsIMutI | CAGTG | 2 cut(s) | 1128, 2952 |
| BveI | ACCTGC | 2 cut(s) | 187, 3175 |
| Cac8I | GCNNGC | 3 cut(s) | 438, 1808, 2873 |
| CfoI | GCGC | 3 cut(s) | 1569, 1664, 2877 |
| Cfr13I | GGNCC | 6 cut(s) | 176, 901, 1809, 2851, 2893, 3492 |
| ClaI | ATCGAT | 3 cut(s) | 132, 144, 1941 |
| CseI | GACGC | 2 cut(s) | 2335, 2826 |
| Csp6I | GTAC | 6 cut(s) | 654, 1753, 2025, 2157, 2365, 2705 |
| CviQI | GTAC | 6 cut(s) | 654, 1753, 2025, 2157, 2365, 2705 |
| DraI | TTTAAA | 1 cut(s) | 1824 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 629, 792 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 629, 792 |
| Eam1104I | CTCTTC | 5 cut(s) | 22, 730, 1115, 1548, 2542 |
| EarI | CTCTTC | 5 cut(s) | 22, 730, 1115, 1548, 2542 |
| Eco130I | CCWWGG | 1 cut(s) | 1698 |
| Eco147I | AGGCCT | 1 cut(s) | 2979 |
| Eco31I | GGTCTC | 1 cut(s) | 2196 |
| Eco32I | GATATC | 2 cut(s) | 299, 1799 |
| Eco47I | GGWCC | 5 cut(s) | 176, 901, 2851, 2893, 3492 |
| Eco57I | CTGAAG | 5 cut(s) | 916, 1170, 1283, 1572, 3156 |
| Eco88I | CYCGRG | 3 cut(s) | 2098, 2420, 2594 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 2578, 3482 |
| EcoO109I | RGGNCCY | 2 cut(s) | 901, 2851 |
| EcoRII | CCWGG | 6 cut(s) | 903, 1558, 1676, 2579, 2979, 3325 |
| EcoRV | GATATC | 2 cut(s) | 299, 1799 |
| EcoT14I | CCWWGG | 1 cut(s) | 1698 |
| EcoT22I | ATGCAT | 3 cut(s) | 620, 1420, 1503 |
| ErhI | CCWWGG | 1 cut(s) | 1698 |
| Esp3I | CGTCTC | 1 cut(s) | 800 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 633, 665 |
| FaqI | GGGAC | 6 cut(s) | 617, 874, 1762, 2588, 3620, 3636 |
| FauI | CCCGC | 2 cut(s) | 89, 642 |
| FbaI | TGATCA | 2 cut(s) | 2805, 3628 |
| FblI | GTMKAC | 3 cut(s) | 29, 1489, 1580 |
| Fnu4HI | GCNGC | 7 cut(s) | 372, 375, 1961, 2653, 2656, 2728, 2929 |
| FokI | GGATG | 6 cut(s) | 275, 1510, 2810, 3065, 3092, 3343 |
| Fsp4HI | GCNGC | 7 cut(s) | 372, 375, 1961, 2653, 2656, 2728, 2929 |
| FspBI | CTAG | 8 cut(s) | 486, 1002, 1412, 1964, 2448, 2714, 2841, 3672 |
| GlaI | GCGC | 3 cut(s) | 1568, 1663, 2876 |
| GluI | GCNGC | 7 cut(s) | 372, 375, 1961, 2653, 2656, 2728, 2929 |
| GsuI | CTGGAG | 1 cut(s) | 1164 |
| HaeII | RGCGCY | 2 cut(s) | 1665, 2878 |
| HaeIII | GGCC | 2 cut(s) | 1810, 2979 |
| HapII | CCGG | 1 cut(s) | 2891 |
| HgaI | GACGC | 2 cut(s) | 2335, 2826 |
| HhaI | GCGC | 3 cut(s) | 1569, 1664, 2877 |
| Hin6I | GCGC | 3 cut(s) | 1567, 1662, 2875 |
| HinP1I | GCGC | 3 cut(s) | 1567, 1662, 2875 |
| HindIII | AAGCTT | 4 cut(s) | 1295, 2069, 2264, 3251 |
| HpaII | CCGG | 1 cut(s) | 2891 |
| HphI | GGTGA | 6 cut(s) | 472, 1714, 2395, 3386, 3449, 3499 |
| Hpy166II | GTNNAC | 8 cut(s) | 30, 548, 785, 1490, 1581, 2027, 3415, 3495 |
| Hpy8I | GTNNAC | 8 cut(s) | 30, 548, 785, 1490, 1581, 2027, 3415, 3495 |
| Hpy99I | CGWCG | 2 cut(s) | 626, 2351 |
| HpyCH4III | ACNGT | 7 cut(s) | 658, 1752, 1757, 2031, 2364, 2913, 2947 |
| HpyCH4IV | ACGT | 4 cut(s) | 397, 835, 1280, 2859 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 380, 624, 1564, 1873, 2763, 3176, 3302 |
| HpySE526I | ACGT | 4 cut(s) | 397, 835, 1280, 2859 |
| HspAI | GCGC | 3 cut(s) | 1567, 1662, 2875 |
| Ksp22I | TGATCA | 2 cut(s) | 2805, 3628 |
| LguI | GCTCTTC | 3 cut(s) | 22, 1115, 1548 |
| LmnI | GCTCC | 4 cut(s) | 943, 1669, 2476, 3066 |
| Lsp1109I | GCAGC | 7 cut(s) | 361, 383, 1972, 2639, 2642, 2714, 2915 |
| MaeI | CTAG | 8 cut(s) | 486, 1002, 1412, 1964, 2448, 2714, 2841, 3672 |
| MaeII | ACGT | 4 cut(s) | 397, 835, 1280, 2859 |
| MaeIII | GTNAC | 5 cut(s) | 350, 1949, 3310, 3347, 3553 |
| MbiI | CCGCTC | 1 cut(s) | 162 |
| MfeI | CAATTG | 3 cut(s) | 938, 2866, 3037 |
| MflI | RGATCY | 5 cut(s) | 334, 1768, 1978, 2011, 2121 |
| MlyI | GAGTC | 9 cut(s) | 371, 467, 714, 1675, 1784, 1946, 2110, 2395, 2606 |
| MmeI | TCCRAC | 6 cut(s) | 519, 556, 934, 1587, 2276, 3126 |
| Mph1103I | ATGCAT | 3 cut(s) | 620, 1420, 1503 |
| MroXI | GAANNNNTTC | 6 cut(s) | 810, 929, 963, 1296, 1533, 1632 |
| MslI | CAYNNNNRTG | 6 cut(s) | 279, 1119, 1133, 1460, 2185, 3461 |
| MspA1I | CMGCKG | 1 cut(s) | 374 |
| MspCI | CTTAAG | 6 cut(s) | 107, 155, 425, 1922, 2105, 2492 |
| MspI | CCGG | 1 cut(s) | 2891 |
| MspR9I | CCNGG | 6 cut(s) | 905, 1560, 1678, 2581, 2981, 3327 |
| MunI | CAATTG | 3 cut(s) | 938, 2866, 3037 |
| Mva1269I | GAATGC | 6 cut(s) | 290, 377, 591, 1126, 1191, 3064 |
| MvaI | CCWGG | 6 cut(s) | 905, 1560, 1678, 2581, 2981, 3327 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 380, 624, 1564, 1873, 2763, 3176, 3302 |
| NlaIV | GGNNCC | 4 cut(s) | 1219, 2478, 2585, 2852 |
| NmeAIII | GCCGAG | 1 cut(s) | 1690 |
| NmuCI | GTSAC | 2 cut(s) | 1949, 3553 |
| NsiI | ATGCAT | 3 cut(s) | 620, 1420, 1503 |
| NspI | RCATGY | 4 cut(s) | 347, 440, 1371, 1422 |
| NspV | TTCGAA | 2 cut(s) | 3094, 3715 |
| PaeI | GCATGC | 1 cut(s) | 440 |
| PaeR7I | CTCGAG | 3 cut(s) | 2098, 2420, 2594 |
| PceI | AGGCCT | 1 cut(s) | 2979 |
| PciSI | GCTCTTC | 3 cut(s) | 22, 1115, 1548 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 982 |
| PctI | GAATGC | 6 cut(s) | 290, 377, 591, 1126, 1191, 3064 |
| PdmI | GAANNNNTTC | 6 cut(s) | 810, 929, 963, 1296, 1533, 1632 |
| PkrI | GCNGC | 7 cut(s) | 373, 376, 1962, 2654, 2657, 2729, 2930 |
| PleI | GAGTC | 9 cut(s) | 370, 467, 714, 1675, 1783, 1946, 2109, 2394, 2605 |
| PpsI | GAGTC | 9 cut(s) | 370, 467, 714, 1675, 1783, 1946, 2109, 2394, 2605 |
| PpuMI | RGGWCCY | 2 cut(s) | 901, 2851 |
| Psp1406I | AACGTT | 2 cut(s) | 397, 835 |
| Psp5II | RGGWCCY | 2 cut(s) | 901, 2851 |
| Psp6I | CCWGG | 6 cut(s) | 903, 1558, 1676, 2579, 2979, 3325 |
| PspGI | CCWGG | 6 cut(s) | 903, 1558, 1676, 2579, 2979, 3325 |
| PspN4I | GGNNCC | 4 cut(s) | 1219, 2478, 2585, 2852 |
| PspPI | GGNCC | 6 cut(s) | 176, 901, 1809, 2851, 2893, 3492 |
| PspPPI | RGGWCCY | 2 cut(s) | 901, 2851 |
| PspXI | VCTCGAGB | 2 cut(s) | 2098, 2594 |
| PstI | CTGCAG | 2 cut(s) | 1893, 2660 |
| PsuI | RGATCY | 5 cut(s) | 334, 1768, 1978, 2011, 2121 |
| PvuII | CAGCTG | 1 cut(s) | 374 |
| RsaI | GTAC | 6 cut(s) | 655, 1754, 2026, 2158, 2366, 2706 |
| RsaNI | GTAC | 6 cut(s) | 654, 1753, 2025, 2157, 2365, 2705 |
| RseI | CAYNNNNRTG | 6 cut(s) | 279, 1119, 1133, 1460, 2185, 3461 |
| SapI | GCTCTTC | 3 cut(s) | 22, 1115, 1548 |
| SatI | GCNGC | 7 cut(s) | 372, 375, 1961, 2653, 2656, 2728, 2929 |
| Sau96I | GGNCC | 6 cut(s) | 176, 901, 1809, 2851, 2893, 3492 |
| ScaI | AGTACT | 2 cut(s) | 1754, 2158 |
| SchI | GAGTC | 9 cut(s) | 371, 467, 714, 1675, 1784, 1946, 2110, 2395, 2606 |
| ScrFI | CCNGG | 6 cut(s) | 905, 1560, 1678, 2581, 2981, 3327 |
| SfcI | CTRYAG | 5 cut(s) | 858, 1103, 1889, 2656, 2761 |
| Sfr274I | CTCGAG | 3 cut(s) | 2098, 2420, 2594 |
| SfuI | TTCGAA | 2 cut(s) | 3094, 3715 |
| SinI | GGWCC | 5 cut(s) | 176, 901, 2851, 2893, 3492 |
| SlaI | CTCGAG | 3 cut(s) | 2098, 2420, 2594 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 279, 1119, 1133, 1460, 2185, 3461 |
| SpeI | ACTAGT | 1 cut(s) | 485 |
| SphI | GCATGC | 1 cut(s) | 440 |
| SseBI | AGGCCT | 1 cut(s) | 2979 |
| SsiI | CCGC | 6 cut(s) | 82, 162, 635, 1433, 3192, 3234 |
| SspI | AATATT | 1 cut(s) | 1999 |
| SspMI | CTAG | 8 cut(s) | 486, 1002, 1412, 1964, 2448, 2714, 2841, 3672 |
| StuI | AGGCCT | 1 cut(s) | 2979 |
| StyD4I | CCNGG | 6 cut(s) | 903, 1558, 1676, 2579, 2979, 3325 |
| StyI | CCWWGG | 1 cut(s) | 1698 |
| TaaI | ACNGT | 7 cut(s) | 658, 1752, 1757, 2031, 2364, 2913, 2947 |
| TaiI | ACGT | 4 cut(s) | 400, 838, 1283, 2862 |
| TaqII | GACCGA | 1 cut(s) | 862 |
| TatI | WGTACW | 4 cut(s) | 1752, 2024, 2156, 2364 |
| TscAI | CASTG | 2 cut(s) | 1135, 2952 |
| TseFI | GTSAC | 2 cut(s) | 1949, 3553 |
| TseI | GCWGC | 7 cut(s) | 371, 374, 1960, 2652, 2655, 2727, 2928 |
| Tsp45I | GTSAC | 2 cut(s) | 1949, 3553 |
| TspGWI | ACGGA | 4 cut(s) | 1185, 1217, 1636, 1752 |
| TspRI | CASTG | 2 cut(s) | 1135, 2952 |
| Vha464I | CTTAAG | 6 cut(s) | 107, 155, 425, 1922, 2105, 2492 |
| VpaK11BI | GGWCC | 5 cut(s) | 176, 901, 2851, 2893, 3492 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 2578, 3482 |
| XapI | RAATTY | 9 cut(s) | 1209, 1258, 1721, 2138, 2548, 2635, 3046, 3128, 3201 |
| XbaI | TCTAGA | 1 cut(s) | 2713 |
| XceI | RCATGY | 4 cut(s) | 347, 440, 1371, 1422 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2256, 2552 |
| XhoI | CTCGAG | 3 cut(s) | 2098, 2420, 2594 |
| XmiI | GTMKAC | 3 cut(s) | 29, 1489, 1580 |
| XmnI | GAANNNNTTC | 6 cut(s) | 810, 929, 963, 1296, 1533, 1632 |
| XspI | CTAG | 8 cut(s) | 486, 1002, 1412, 1964, 2448, 2714, 2841, 3672 |
| ZrmI | AGTACT | 2 cut(s) | 1754, 2158 |
| Zsp2I | ATGCAT | 3 cut(s) | 620, 1420, 1503 |