Disease resistance protein (TIR-NBS-LRR class)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| B56 | PF01603 | 87 - 498 | 2.2e-191 | Protein phosphatase 2A regulatory B subunit (B56 family) |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 1156 |
| AccB1I | GGYRCC | 1 cut(s) | 1156 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1006 |
| AciI | CCGC | 6 cut(s) | 570, 578, 772, 1211, 1363, 1523 |
| AclI | AACGTT | 1 cut(s) | 1477 |
| AcoI | YGGCCR | 2 cut(s) | 575, 1177 |
| AcsI | RAATTY | 5 cut(s) | 125, 235, 283, 758, 1415 |
| AfaI | GTAC | 4 cut(s) | 145, 656, 971, 1158 |
| AfeI | AGCGCT | 1 cut(s) | 1148 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 179, 1006, 1303 |
| AjnI | CCWGG | 4 cut(s) | 207, 1132, 1332, 1419 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 419, 451 |
| Alw21I | GWGCWC | 3 cut(s) | 771, 912, 1222 |
| Alw26I | GTCTC | 3 cut(s) | 153, 623, 714 |
| Alw44I | GTGCAC | 1 cut(s) | 767 |
| Ama87I | CYCGRG | 1 cut(s) | 136 |
| Aor51HI | AGCGCT | 1 cut(s) | 1148 |
| AoxI | GGCC | 5 cut(s) | 157, 531, 575, 1061, 1177 |
| ApaLI | GTGCAC | 1 cut(s) | 767 |
| ApeKI | GCWGC | 2 cut(s) | 979, 1493 |
| ApoI | RAATTY | 5 cut(s) | 125, 235, 283, 758, 1415 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 109 |
| Asp718I | GGTACC | 1 cut(s) | 1156 |
| AspA2I | CCTAGG | 1 cut(s) | 29 |
| AspLEI | GCGC | 1 cut(s) | 1149 |
| AspS9I | GGNCC | 2 cut(s) | 158, 565 |
| AsuHPI | GGTGA | 2 cut(s) | 615, 1112 |
| AsuII | TTCGAA | 1 cut(s) | 1079 |
| AvaI | CYCGRG | 1 cut(s) | 136 |
| AvaII | GGWCC | 1 cut(s) | 565 |
| AvrII | CCTAGG | 1 cut(s) | 29 |
| BaeGI | GKGCMC | 1 cut(s) | 771 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1148, 1181 |
| BanI | GGYRCC | 1 cut(s) | 1156 |
| BanII | GRGCYC | 2 cut(s) | 558, 1222 |
| Bbv12I | GWGCWC | 3 cut(s) | 771, 912, 1222 |
| BbvI | GCAGC | 2 cut(s) | 991, 1480 |
| BccI | CCATC | 3 cut(s) | 463, 981, 1295 |
| BceAI | ACGGC | 1 cut(s) | 1164 |
| BciT130I | CCWGG | 4 cut(s) | 209, 1134, 1334, 1421 |
| BciVI | GTATCC | 1 cut(s) | 973 |
| BclI | TGATCA | 3 cut(s) | 3, 661, 1240 |
| BcoDI | GTCTC | 3 cut(s) | 153, 623, 714 |
| BfaI | CTAG | 4 cut(s) | 30, 264, 527, 1567 |
| BfoI | RGCGCY | 1 cut(s) | 1150 |
| BfuI | GTATCC | 1 cut(s) | 973 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1176 |
| BisI | GCNGC | 3 cut(s) | 578, 980, 1494 |
| BlnI | CCTAGG | 1 cut(s) | 29 |
| BlpI | GCTNAGC | 1 cut(s) | 849 |
| BlsI | GCNGC | 3 cut(s) | 579, 981, 1495 |
| Bme1390I | CCNGG | 4 cut(s) | 209, 1134, 1334, 1421 |
| Bme18I | GGWCC | 1 cut(s) | 565 |
| BmeT110I | CYCGRG | 1 cut(s) | 136 |
| BmgT120I | GGNCC | 2 cut(s) | 158, 565 |
| BmiI | GGNNCC | 4 cut(s) | 67, 567, 1158, 1331 |
| BmrFI | CCNGG | 4 cut(s) | 209, 1134, 1334, 1421 |
| BmsI | GCATC | 3 cut(s) | 625, 629, 751 |
| BpmI | CTGGAG | 1 cut(s) | 1155 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1389 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 849 |
| Bpu14I | TTCGAA | 1 cut(s) | 1079 |
| BpuEI | CTTGAG | 4 cut(s) | 350, 628, 662, 1207 |
| BsaJI | CCNNGG | 3 cut(s) | 29, 1042, 1548 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 179, 1006, 1303 |
| Bse1I | ACTGG | 2 cut(s) | 96, 1331 |
| Bse3DI | GCAATG | 2 cut(s) | 257, 414 |
| BseBI | CCWGG | 4 cut(s) | 209, 1134, 1334, 1421 |
| BseDI | CCNNGG | 3 cut(s) | 29, 1042, 1548 |
| BseGI | GGATG | 2 cut(s) | 217, 709 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 179, 1006, 1303 |
| BseMI | GCAATG | 2 cut(s) | 257, 414 |
| BseMII | CTCAG | 5 cut(s) | 453, 618, 840, 1142, 1380 |
| BseNI | ACTGG | 2 cut(s) | 96, 1331 |
| BseRI | GAGGAG | 1 cut(s) | 78 |
| BseSI | GKGCMC | 1 cut(s) | 771 |
| BseXI | GCAGC | 2 cut(s) | 991, 1480 |
| BshFI | GGCC | 5 cut(s) | 159, 533, 577, 1063, 1179 |
| BshNI | GGYRCC | 1 cut(s) | 1156 |
| BsiHKAI | GWGCWC | 3 cut(s) | 771, 912, 1222 |
| BsiHKCI | CYCGRG | 1 cut(s) | 136 |
| BslFI | GGGAC | 1 cut(s) | 1519 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 179, 1006, 1303 |
| BsmAI | GTCTC | 3 cut(s) | 153, 623, 714 |
| BsmBI | CGTCTC | 1 cut(s) | 153 |
| BsmFI | GGGAC | 1 cut(s) | 1519 |
| BsmI | GAATGC | 2 cut(s) | 223, 1409 |
| BsnI | GGCC | 5 cut(s) | 159, 533, 577, 1063, 1179 |
| BsoBI | CYCGRG | 1 cut(s) | 136 |
| Bsp119I | TTCGAA | 1 cut(s) | 1079 |
| Bsp1286I | GDGCHC | 4 cut(s) | 558, 771, 912, 1222 |
| Bsp143I | GATC | 3 cut(s) | 3, 661, 1240 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 849 |
| Bsp19I | CCATGG | 1 cut(s) | 1548 |
| BspACI | CCGC | 6 cut(s) | 570, 578, 772, 1211, 1363, 1523 |
| BspANI | GGCC | 5 cut(s) | 159, 533, 577, 1063, 1179 |
| BspCNI | CTCAG | 5 cut(s) | 452, 619, 841, 1141, 1381 |
| BspLI | GGNNCC | 4 cut(s) | 67, 567, 1158, 1331 |
| BspQI | GCTCTTC | 1 cut(s) | 900 |
| BspT104I | TTCGAA | 1 cut(s) | 1079 |
| BspT107I | GGYRCC | 1 cut(s) | 1156 |
| BsrDI | GCAATG | 2 cut(s) | 257, 414 |
| BsrI | ACTGG | 2 cut(s) | 96, 1331 |
| BssECI | CCNNGG | 3 cut(s) | 29, 1042, 1548 |
| BssMI | GATC | 3 cut(s) | 3, 661, 1240 |
| BssT1I | CCWWGG | 2 cut(s) | 29, 1548 |
| Bst2UI | CCWGG | 4 cut(s) | 209, 1134, 1334, 1421 |
| Bst4CI | ACNGT | 3 cut(s) | 736, 884, 1019 |
| Bst6I | CTCTTC | 3 cut(s) | 540, 900, 1479 |
| BstBI | TTCGAA | 1 cut(s) | 1079 |
| BstC8I | GCNNGC | 2 cut(s) | 200, 1409 |
| BstDEI | CTNAG | 8 cut(s) | 439, 541, 627, 648, 849, 1096, 1128, 1389 |
| BstDSI | CCRYGG | 2 cut(s) | 1042, 1548 |
| BstF5I | GGATG | 2 cut(s) | 217, 709 |
| BstH2I | RGCGCY | 1 cut(s) | 1150 |
| BstHHI | GCGC | 1 cut(s) | 1149 |
| BstKTI | GATC | 3 cut(s) | 6, 664, 1243 |
| BstMAI | GTCTC | 3 cut(s) | 153, 623, 714 |
| BstMBI | GATC | 3 cut(s) | 3, 661, 1240 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 530, 583, 644, 1176, 1217, 1502 |
| BstNI | CCWGG | 4 cut(s) | 209, 1134, 1334, 1421 |
| BstSCI | CCNGG | 4 cut(s) | 207, 1132, 1332, 1419 |
| BstSLI | GKGCMC | 1 cut(s) | 771 |
| BstV1I | GCAGC | 2 cut(s) | 991, 1480 |
| BsuI | GTATCC | 1 cut(s) | 973 |
| BsuRI | GGCC | 5 cut(s) | 159, 533, 577, 1063, 1179 |
| BtgI | CCRYGG | 2 cut(s) | 1042, 1548 |
| BtsCI | GGATG | 2 cut(s) | 217, 709 |
| BtsIMutI | CAGTG | 2 cut(s) | 345, 1324 |
| Cac8I | GCNNGC | 2 cut(s) | 200, 1409 |
| CfoI | GCGC | 1 cut(s) | 1149 |
| Cfr13I | GGNCC | 2 cut(s) | 158, 565 |
| Csp6I | GTAC | 4 cut(s) | 144, 655, 970, 1157 |
| CviAII | CATG | 6 cut(s) | 191, 512, 573, 1090, 1274, 1549 |
| CviQI | GTAC | 4 cut(s) | 144, 655, 970, 1157 |
| DdeI | CTNAG | 8 cut(s) | 439, 541, 627, 648, 849, 1096, 1128, 1389 |
| DpnI | GATC | 3 cut(s) | 5, 663, 1242 |
| DpnII | GATC | 3 cut(s) | 3, 661, 1240 |
| EaeI | YGGCCR | 2 cut(s) | 575, 1177 |
| Eam1104I | CTCTTC | 3 cut(s) | 540, 900, 1479 |
| EarI | CTCTTC | 3 cut(s) | 540, 900, 1479 |
| EciI | GGCGGA | 1 cut(s) | 1226 |
| Ecl136II | GAGCTC | 1 cut(s) | 1220 |
| Eco130I | CCWWGG | 2 cut(s) | 29, 1548 |
| Eco147I | AGGCCT | 1 cut(s) | 533 |
| Eco24I | GRGCYC | 2 cut(s) | 558, 1222 |
| Eco47I | GGWCC | 1 cut(s) | 565 |
| Eco47III | AGCGCT | 1 cut(s) | 1148 |
| Eco53kI | GAGCTC | 1 cut(s) | 1220 |
| Eco88I | CYCGRG | 1 cut(s) | 136 |
| EcoICRI | GAGCTC | 1 cut(s) | 1220 |
| EcoO109I | RGGNCCY | 1 cut(s) | 158 |
| EcoRI | GAATTC | 2 cut(s) | 235, 283 |
| EcoRII | CCWGG | 4 cut(s) | 207, 1132, 1332, 1419 |
| EcoT14I | CCWWGG | 2 cut(s) | 29, 1548 |
| EcoT38I | GRGCYC | 2 cut(s) | 558, 1222 |
| ErhI | CCWWGG | 2 cut(s) | 29, 1548 |
| Esp3I | CGTCTC | 1 cut(s) | 153 |
| FaeI | CATG | 6 cut(s) | 194, 515, 576, 1093, 1277, 1552 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 284, 316, 305, 337, 1512, 1544 |
| FaqI | GGGAC | 1 cut(s) | 1519 |
| FatI | CATG | 6 cut(s) | 190, 511, 572, 1089, 1273, 1548 |
| FauI | CCCGC | 1 cut(s) | 577 |
| FbaI | TGATCA | 3 cut(s) | 3, 661, 1240 |
| Fnu4HI | GCNGC | 3 cut(s) | 578, 980, 1494 |
| FokI | GGATG | 2 cut(s) | 224, 716 |
| FriOI | GRGCYC | 2 cut(s) | 558, 1222 |
| Fsp4HI | GCNGC | 3 cut(s) | 578, 980, 1494 |
| FspBI | CTAG | 4 cut(s) | 30, 264, 527, 1567 |
| GlaI | GCGC | 1 cut(s) | 1148 |
| GluI | GCNGC | 3 cut(s) | 578, 980, 1494 |
| GsuI | CTGGAG | 1 cut(s) | 1155 |
| HaeII | RGCGCY | 1 cut(s) | 1150 |
| HaeIII | GGCC | 5 cut(s) | 159, 533, 577, 1063, 1179 |
| HhaI | GCGC | 1 cut(s) | 1149 |
| Hin1II | CATG | 6 cut(s) | 194, 515, 576, 1093, 1277, 1552 |
| Hin6I | GCGC | 1 cut(s) | 1147 |
| HinP1I | GCGC | 1 cut(s) | 1147 |
| HindIII | AAGCTT | 2 cut(s) | 200, 1503 |
| HinfI | GANTC | 3 cut(s) | 698, 747, 1267 |
| HphI | GGTGA | 2 cut(s) | 615, 1112 |
| Hpy166II | GTNNAC | 3 cut(s) | 769, 1022, 1196 |
| Hpy188I | TCNGA | 6 cut(s) | 282, 289, 442, 703, 1344, 1378 |
| Hpy188III | TCNNGA | 6 cut(s) | 56, 102, 455, 527, 607, 784 |
| Hpy8I | GTNNAC | 3 cut(s) | 769, 1022, 1196 |
| HpyAV | CCTTC | 4 cut(s) | 53, 1308, 1435, 1569 |
| HpyCH4III | ACNGT | 3 cut(s) | 736, 884, 1019 |
| HpyCH4IV | ACGT | 5 cut(s) | 146, 392, 657, 1459, 1477 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 530, 583, 644, 1176, 1217, 1502 |
| HpyF3I | CTNAG | 8 cut(s) | 439, 541, 627, 648, 849, 1096, 1128, 1389 |
| HpySE526I | ACGT | 5 cut(s) | 146, 392, 657, 1459, 1477 |
| Hsp92II | CATG | 6 cut(s) | 194, 515, 576, 1093, 1277, 1552 |
| HspAI | GCGC | 1 cut(s) | 1147 |
| KpnI | GGTACC | 1 cut(s) | 1160 |
| Ksp22I | TGATCA | 3 cut(s) | 3, 661, 1240 |
| Kzo9I | GATC | 3 cut(s) | 3, 661, 1240 |
| LguI | GCTCTTC | 1 cut(s) | 900 |
| LmnI | GCTCC | 1 cut(s) | 65 |
| Lsp1109I | GCAGC | 2 cut(s) | 991, 1480 |
| LweI | GCATC | 3 cut(s) | 625, 629, 751 |
| MaeI | CTAG | 4 cut(s) | 30, 264, 527, 1567 |
| MaeII | ACGT | 5 cut(s) | 146, 392, 657, 1459, 1477 |
| MaeIII | GTNAC | 2 cut(s) | 1047, 1514 |
| MalI | GATC | 3 cut(s) | 5, 663, 1242 |
| MboI | GATC | 3 cut(s) | 3, 661, 1240 |
| MboII | GAAGA | 7 cut(s) | 72, 557, 796, 917, 1121, 1436, 1496 |
| MhlI | GDGCHC | 4 cut(s) | 558, 771, 912, 1222 |
| MluCI | AATT | 9 cut(s) | 125, 163, 235, 283, 599, 758, 1001, 1415, 1463 |
| MmeI | TCCRAC | 1 cut(s) | 1284 |
| MroXI | GAANNNNTTC | 1 cut(s) | 109 |
| MseI | TTAA | 4 cut(s) | 18, 204, 228, 1256 |
| MspA1I | CMGCKG | 1 cut(s) | 47 |
| MspR9I | CCNGG | 4 cut(s) | 209, 1134, 1334, 1421 |
| Mva1269I | GAATGC | 2 cut(s) | 223, 1409 |
| MvaI | CCWGG | 4 cut(s) | 209, 1134, 1334, 1421 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 530, 583, 644, 1176, 1217, 1502 |
| NcoI | CCATGG | 1 cut(s) | 1548 |
| NdeII | GATC | 3 cut(s) | 3, 661, 1240 |
| NlaIII | CATG | 6 cut(s) | 194, 515, 576, 1093, 1277, 1552 |
| NlaIV | GGNNCC | 4 cut(s) | 67, 567, 1158, 1331 |
| NspV | TTCGAA | 1 cut(s) | 1079 |
| PceI | AGGCCT | 1 cut(s) | 533 |
| PciSI | GCTCTTC | 1 cut(s) | 900 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 143 |
| PctI | GAATGC | 2 cut(s) | 223, 1409 |
| PdmI | GAANNNNTTC | 1 cut(s) | 109 |
| PfeI | GAWTC | 3 cut(s) | 698, 747, 1267 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1006 |
| PfoI | TCCNGGA | 1 cut(s) | 1419 |
| PkrI | GCNGC | 3 cut(s) | 579, 981, 1495 |
| Psp124BI | GAGCTC | 1 cut(s) | 1222 |
| Psp1406I | AACGTT | 1 cut(s) | 1477 |
| Psp6I | CCWGG | 4 cut(s) | 207, 1132, 1332, 1419 |
| PspGI | CCWGG | 4 cut(s) | 207, 1132, 1332, 1419 |
| PspN4I | GGNNCC | 4 cut(s) | 67, 567, 1158, 1331 |
| PspPI | GGNCC | 2 cut(s) | 158, 565 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 587, 619 |
| PvuII | CAGCTG | 1 cut(s) | 47 |
| RsaI | GTAC | 4 cut(s) | 145, 656, 971, 1158 |
| RsaNI | GTAC | 4 cut(s) | 144, 655, 970, 1157 |
| SacI | GAGCTC | 1 cut(s) | 1222 |
| SapI | GCTCTTC | 1 cut(s) | 900 |
| SaqAI | TTAA | 4 cut(s) | 18, 204, 228, 1256 |
| SatI | GCNGC | 3 cut(s) | 578, 980, 1494 |
| Sau3AI | GATC | 3 cut(s) | 3, 661, 1240 |
| Sau96I | GGNCC | 2 cut(s) | 158, 565 |
| ScrFI | CCNGG | 4 cut(s) | 209, 1134, 1334, 1421 |
| SduI | GDGCHC | 4 cut(s) | 558, 771, 912, 1222 |
| SfaNI | GCATC | 3 cut(s) | 625, 629, 751 |
| SfuI | TTCGAA | 1 cut(s) | 1079 |
| SinI | GGWCC | 1 cut(s) | 565 |
| SmlI | CTYRAG | 4 cut(s) | 365, 607, 677, 1186 |
| SmoI | CTYRAG | 4 cut(s) | 365, 607, 677, 1186 |
| Sse9I | AATT | 9 cut(s) | 125, 163, 235, 283, 599, 758, 1001, 1415, 1463 |
| SseBI | AGGCCT | 1 cut(s) | 533 |
| SsiI | CCGC | 6 cut(s) | 570, 578, 772, 1211, 1363, 1523 |
| SspI | AATATT | 1 cut(s) | 1058 |
| SspMI | CTAG | 4 cut(s) | 30, 264, 527, 1567 |
| SstI | GAGCTC | 1 cut(s) | 1222 |
| StuI | AGGCCT | 1 cut(s) | 533 |
| StyD4I | CCNGG | 4 cut(s) | 207, 1132, 1332, 1419 |
| StyI | CCWWGG | 2 cut(s) | 29, 1548 |
| TaaI | ACNGT | 3 cut(s) | 736, 884, 1019 |
| TaiI | ACGT | 5 cut(s) | 149, 395, 660, 1462, 1480 |
| TaqI | TCGA | 5 cut(s) | 71, 696, 745, 928, 1079 |
| TasI | AATT | 9 cut(s) | 125, 163, 235, 283, 599, 758, 1001, 1415, 1463 |
| TauI | GCSGC | 1 cut(s) | 580 |
| TfiI | GAWTC | 3 cut(s) | 698, 747, 1267 |
| Tru1I | TTAA | 4 cut(s) | 18, 204, 228, 1256 |
| Tru9I | TTAA | 4 cut(s) | 18, 204, 228, 1256 |
| TscAI | CASTG | 2 cut(s) | 352, 1331 |
| TseI | GCWGC | 2 cut(s) | 979, 1493 |
| TspDTI | ATGAA | 6 cut(s) | 228, 237, 528, 612, 769, 1443 |
| TspGWI | ACGGA | 1 cut(s) | 1031 |
| TspRI | CASTG | 2 cut(s) | 352, 1331 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1006 |
| VneI | GTGCAC | 1 cut(s) | 767 |
| VpaK11BI | GGWCC | 1 cut(s) | 565 |
| XapI | RAATTY | 5 cut(s) | 125, 235, 283, 758, 1415 |
| XbaI | TCTAGA | 1 cut(s) | 526 |
| XmaJI | CCTAGG | 1 cut(s) | 29 |
| XmnI | GAANNNNTTC | 1 cut(s) | 109 |
| XspI | CTAG | 4 cut(s) | 30, 264, 527, 1567 |