Prupe.8G179500_v2.0.a1

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
18036686 .. 18043658
6973 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G179500.1

Sequence Viewer

Length: 3816 bp
ATGAATTCTTCTTCTTCTTCTTCTCTTCCTTTTCCTGCTTCCCTTCAAGAAAAGTACGATGTGTTTCTTAGTTTCAGAGGTGAGGACACACGCGATGCTTTTACCAGCCATCTTCACAAGGCTTTACTTGGGAAGAACATTGACACCTACATAGATAACAGACTTGGGAAAGGAGACGACATTGGACCTACCCTTCTAGAAGCAATCGAGAAATCGAAACTTGCACTAGTCATTTTCTCAAAAGACTATGCTTCTTCCACTTGGTGTTTGAAAGAACTTGTGCATATACTTGGATGCAAGAAAAGCTATGGACAGATTGTTATACCCATTTTTTATCGCATAGATCCATCACATGTACGAAAACAGCAGGGAACTTATGCGCTTGAAGATCGTCCACTTAAGCGCAGCAGGGATGAGGTGGCCAACTGGAGGGCTGCTTTGGAGGAAGCAGCCAATATGTCTGGGTTTCATTATTCCAGCAAAACAGGGACAGAGGCCGATTTTGTTGAGAAAGTTGTTCAAGATGTTTTGACCAAATTGAATCGCGAATCGTCAAGTGATTTAAAGGGTCTGGTTGGGATTGAAAAGAAAATTGAGAAAATTGAGTCGTTATTATGCTTGGATTCACGAGGTGTTTGCTGTGTTGGTATTTGGGGCATGGGTGGTATTGGCAAGACCACCCTTGCTGGTGCTGTATTTCACAGGCACTCCTCTAAATTTGAAGTTTGTTGTTTTCTTGCAAATGTCAGGGAGAACTCCGAACAAACAAATGGACTACATCAGTTGCGAAATAAACTTGTTGGTGAGATATTAAAGCAAAAAGATGTAAATATCGACACTCCGTCTATACCACTTAATATTCTAATTAGGCTCAGGCGTACGAAGGCGCTCATTGTTCTCGATGATGTGAATGCTCGAAAACAACTAGAATATCTTGTTGGTGATCATGATTGGTTTTGCCAAGGAAGTCGAATCATTATAACTGCTAGAGATAAAGGCATACTTGAGCAAAAAGTTGACCATGAAAAGATATATAATGTTGAGGGATTAGGTTCTGATGAAGCTCTTGAGCTCTTTCATTCGCATGCTTTTGGAAATAAGTCTCTAACAACAGATTACACTGAGTTCTCAAGAGAGGTGGTGGATTATATTAAGGGCATTCCATTAGCTCTTAAAGTTATGGGGTCCTCATTCCGTCGTTGCAAGAGCAAACAAGAGTGGGAAGCTCAATGGAAAAAAGTGAAACGAGTTCCAATCGGAGAAATCCAGGAAGTGTTGGGAGTAAGTTACGATGGATTAGATGACAATGGGAAGGAGATATTTCTTGATATAGCATGTTTTCATAAAGGCTGTAGGAGGAATGATGTAGAAAGAATGTTAGATGGTTGTGATTTCTTTGGGGAAGCGGGAATCAATGACCTTATTGATAGGTCTCTCGTATCAATTTCAAAAAATGGGTACTGGAACGGTATGCAGTTAGAGATACATGATTTGGTGCAAGAAATGGGTAGGGCAATTGCTCGAGAACAACGCAGTAGGTTGTTCATTGGAAAGGATGTCTATCAAGTATTGACAAATAACCAGAAAGATGGACATGTTCAAGCAATATCCTTTGACTGGTATGAGATTAAAAAGCTACACTTGGAGTTGGAACATGCAAACTTCGAAAAGATGTATGAACTGAGATTCCTACGTGTCAGTCGTTTTCTTCCATCAATGGTTTCTCTTGATCTTCCCAACTCTCTTAGATTTCTTCAATGGGACGGTTATCCTTTGAAATCTTTGCCATCAAAATTTTCTGCTCAAAACCTTGTTGTCCTTGATATGTCATCCAACGAAGTTGAGGTGCAACTTTGGAATGAAAACCAGAGTCCAGTGAATTTAAAACGGATCAGTCTTCGTTTCTGCGAATATCTAACTGAAGTCCCAAATCTCTCTCGGAGTCTAAATATTGAGCATATAAATCTGCCAGGCTGTAAAAGCTTGGTTGAAATTCCTTCGTATTTTCAACATCTTAACAAGCTTACTTATCTTAACCTTGTGATGTGCAACAAGCTCAAAAATCTTGCCGAGATGCCATGCAATCTTGAATACTTAAATTTGTCTTGGACAGCAATAGAGGAATTGCCTTCATCAATTTGGTCTCACGAAAAAATATCTCACTTAGATATTAAACATTGTAGACACCTGAAGAGTCTTCCAAGCAACAGTTGTAAGCTGAAACTCTCGAATTCTTTTAGTCTAGAAGGCTGCGAATCTCTTTGCGAGTTTTGGGAGCTTCCCTGGAATACAACAGTGCTAGAATTGAGTGGTACAACAATAAAAGAATTGAGGAATAAATCAATAAAGTTTGTTGGTCTCACTGCAATTAAACTGATCAATTGCAAAAGCCTTGTGAGTCTCCCAACGAACATTTGGAAGTTGAAATATCTGGAGAGCCTTGATCTCAGTCGTTGCTCTAACCTTGAACACTTCCCAGAAATCTCGGAGGCTATGGAACATCTGGAGTTTCTAAATTTATCATTTACAGCGGTTAAAGAGCTACCCCCATCAATTGGAAATCTAGTTGAGCTTCGAAAATTAGATCTTGGTGATTGCAACAACCTTGTGAGTCTCCCAACGAACATTTGGAAGTTGAAATCTCTGGAGAGCCTTGATCTCAGTCGTTGCTCTAACCTTGAACACTTCCCAGAAATCTCGGAGGCTATGGAACATCTGGAGTTTCTAAATTTATGGAGCACAGCGGTTAAAGAGGTAACATCATCAATTGGAAATCTAGTTGCACTTCGAAAATTAGATCTCGGTGATTGCAGCATACAAGAAATCCCTGATGACCTTTTTTGCTTAACCTCATTACAAGAGTTAACTCTGAGTTTCACCGAAATTAAGAGCATACCTGCAAGCGTCAAACAAGCTGCTCAACTATCTCGCCTGTTCCTCAACGGTTGCAAGAGCCTTGAATCTTTACCAGAGTTCCCCCCATTGCTGCAACATCTTGAAGCAGATGGTTGCACGTCACTGAAGACAGTGTCAAGTTCAAGCACTGCAATCACACAAGGTTGGGAAGAATATATATTTTATCTAGGGCTTTCTGAGAAACATAATTTTTCTAATTGCCCAAAGTTGGATGAGAATGCACGAAGCAACATAATGGGTGATGCACAGCTCAGAATTATGCGAATGGCAATTGCTTCGTCAGAGTTTAAAGAAGACAAAATTGAACAACCATCATATCATTCAGATAATAGCTATTATGATTTTGAGGAATCTTTACGCAAGAGATCTTTTGTTGCCATTAGATGTTGCGGGAATGAAATTCCAAAATGGTTCAGCCATAAAAGTGAGGGATGTTCAATAAAGATTGAGCTTCCTGGTGATTGGTTTAGCACAGATTTCTTGGGTTTCGCTCTATCTATTGTTGTTGCAAAGGACGGATTCTCTCCTCATGCGATTTCCAGCATTGAATGCAAGTACAACTTCAAAACTAGTAATGGTGAAAGCCATGAAGTCAACCATCCTTTGTGCAATCTGCGCAGGGATACTATGGGGTTTGAAAGCATAGATTCATATGAAGTGTTTGTGTTGTGGTATAATAATGTCTTTGAAGAAGTTGTAGAGGGAGCTCAAAGCCCCACTGCCTTTTTCAAACTTGTTACGGAGGTCAATGTTGACTTCATCATACGGAGTCCTTATGACAGCGAAAGCTATTCGGAGGGGGAGGAGGTGGAGGAGGAGATGGAGGTGAAGGTGGAAAAGTGTGGGATATGTCTGTTGTATGGCAAAGATGCTGAGATGATAAAGCAGAGGGCTTTGTAG

Protein Analysis

1272

Amino Acids

144.47

Weight (kDa)

5.66

Isoelectric Point (pI)

45.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 980
Acc16I TGCGCA 1 cut(s) 3533
Acc36I ACCTGC 1 cut(s) 2905
AccB7I CCANNNNNTGG 1 cut(s) 2555
AccI GTMKAC 1 cut(s) 2182
AccII CGCG 2 cut(s) 93, 546
AciI CCGC 4 cut(s) 1406, 2531, 2744, 3306
AclWI GGATC 2 cut(s) 338, 1898
AcoI YGGCCR 1 cut(s) 420
AcuI CTGAAG 3 cut(s) 1941, 2210, 3041
AdeI CACNNNGTG 2 cut(s) 264, 632
AfaI GTAC 6 cut(s) 56, 357, 880, 1460, 2314, 3473
AfiI CCNNNNNNNGG 4 cut(s) 429, 1617, 2555, 3124
AflII CTTAAG 1 cut(s) 398
AflIII ACRYGT 3 cut(s) 352, 1594, 1693
AhdI GACNNNNNGTC 1 cut(s) 841
AhlI ACTAGT 2 cut(s) 226, 3485
AjiI CACGTC 1 cut(s) 3015
AjnI CCWGG 4 cut(s) 1266, 1969, 2282, 3370
AjuI GAANNNNNNNTTGG 2 cut(s) 921, 953
AloI GAACNNNNNNTCC 2 cut(s) 1671, 1703
Alw21I GWGCWC 3 cut(s) 1074, 2741, 3625
Alw26I GTCTC 7 cut(s) 168, 1107, 1437, 2148, 2363, 2405, 2618
AlwI GGATC 2 cut(s) 338, 1898
Ama87I CYCGRG 1 cut(s) 1521
AoxI GGCC 2 cut(s) 420, 495
ApeKI GCWGC 7 cut(s) 405, 434, 449, 2250, 2811, 2915, 2986
AspLEI GCGC 4 cut(s) 382, 405, 889, 3534
AspS9I GGNCC 2 cut(s) 185, 1185
AsuII TTCGAA 3 cut(s) 1665, 2575, 2788
AvaI CYCGRG 1 cut(s) 1521
AvaII GGWCC 2 cut(s) 185, 1185
BalI TGGCCA 1 cut(s) 422
BanII GRGCYC 2 cut(s) 1074, 3625
BauI CACGAG 1 cut(s) 627
BbsI GAAGAC 4 cut(s) 1889, 2189, 3029, 3216
Bbv12I GWGCWC 3 cut(s) 1074, 2741, 3625
BbvI GCAGC 7 cut(s) 417, 421, 461, 2237, 2823, 2902, 2973
BcgI CGANNNNNNTGC 4 cut(s) 618, 652, 3174, 3208
BciT130I CCWGG 4 cut(s) 1268, 1971, 2284, 3372
BciVI GTATCC 1 cut(s) 3532
BclI TGATCA 2 cut(s) 943, 2376
BcoDI GTCTC 7 cut(s) 168, 1107, 1437, 2148, 2363, 2405, 2618
BcuI ACTAGT 2 cut(s) 226, 3485
BfmI CTRYAG 1 cut(s) 1351
BfoI RGCGCY 1 cut(s) 890
BfrI CTTAAG 1 cut(s) 398
BfuAI ACCTGC 1 cut(s) 2905
BfuI GTATCC 1 cut(s) 3532
BglII AGATCT 3 cut(s) 2584, 2797, 3281
BisI GCNGC 7 cut(s) 406, 435, 450, 2251, 2812, 2916, 2987
BlsI GCNGC 7 cut(s) 407, 436, 451, 2252, 2813, 2917, 2988
Bme1390I CCNGG 4 cut(s) 1268, 1971, 2284, 3372
Bme18I GGWCC 2 cut(s) 185, 1185
BmeRI GACNNNNNGTC 1 cut(s) 841
BmeT110I CYCGRG 1 cut(s) 1521
BmgBI CACGTC 1 cut(s) 3015
BmgT120I GGNCC 2 cut(s) 185, 1185
BmiI GGNNCC 1 cut(s) 1186
BmrFI CCNGG 4 cut(s) 1268, 1971, 2284, 3372
BmsI GCATC 5 cut(s) 85, 284, 2064, 3148, 3775
BpiI GAAGAC 4 cut(s) 1889, 2189, 3029, 3216
BpmI CTGGAG 5 cut(s) 448, 2453, 2525, 2666, 2738
Bpu10I CCTNAGC 1 cut(s) 872
Bpu14I TTCGAA 3 cut(s) 1665, 2575, 2788
BpuEI CTTGAG 3 cut(s) 1025, 1088, 1114
BsaAI YACGTR 1 cut(s) 1694
BsaBI GATNNNNATC 1 cut(s) 1560
BsaI GGTCTC 3 cut(s) 1437, 2148, 2363
BsaJI CCNNGG 2 cut(s) 961, 2282
BsaXI ACNNNNNCTCC 2 cut(s) 692, 722
Bsc4I CCNNNNNNNGG 4 cut(s) 429, 1617, 2555, 3124
Bse1I ACTGG 4 cut(s) 431, 1466, 1622, 1874
Bse3DI GCAATG 1 cut(s) 2981
Bse8I GATNNNNATC 1 cut(s) 1560
BseBI CCWGG 4 cut(s) 1268, 1971, 2284, 3372
BseDI CCNNGG 2 cut(s) 961, 2282
BseGI GGATG 7 cut(s) 299, 418, 1561, 1829, 3133, 3353, 3514
BseJI GATNNNNATC 1 cut(s) 1560
BseLI CCNNNNNNNGG 4 cut(s) 429, 1617, 2555, 3124
BseMI GCAATG 1 cut(s) 2981
BseMII CTCAG 9 cut(s) 886, 1113, 1673, 2461, 2674, 2861, 3084, 3181, 3780
BseNI ACTGG 4 cut(s) 431, 1466, 1622, 1874
BseRI GAGGAG 5 cut(s) 700, 3432, 3734, 3743, 3746
BseXI GCAGC 7 cut(s) 417, 421, 461, 2237, 2823, 2902, 2973
Bsh1236I CGCG 2 cut(s) 93, 546
BshFI GGCC 2 cut(s) 422, 497
BsiHKAI GWGCWC 3 cut(s) 1074, 2741, 3625
BsiHKCI CYCGRG 1 cut(s) 1521
BsiWI CGTACG 1 cut(s) 878
BslFI GGGAC 3 cut(s) 502, 1775, 1910
BslI CCNNNNNNNGG 4 cut(s) 429, 1617, 2555, 3124
BsmAI GTCTC 7 cut(s) 168, 1107, 1437, 2148, 2363, 2405, 2618
BsmBI CGTCTC 1 cut(s) 168
BsmFI GGGAC 3 cut(s) 502, 1775, 1910
BsmI GAATGC 4 cut(s) 916, 1158, 3139, 3470
BsnI GGCC 2 cut(s) 422, 497
Bso31I GGTCTC 3 cut(s) 1437, 2148, 2363
BsoBI CYCGRG 1 cut(s) 1521
Bsp119I TTCGAA 3 cut(s) 1665, 2575, 2788
Bsp1286I GDGCHC 3 cut(s) 1074, 2741, 3625
Bsp68I TCGCGA 1 cut(s) 546
BspACI CCGC 4 cut(s) 1406, 2531, 2744, 3306
BspANI GGCC 2 cut(s) 422, 497
BspCNI CTCAG 9 cut(s) 885, 1114, 1674, 2460, 2673, 2862, 3085, 3180, 3781
BspFNI CGCG 2 cut(s) 93, 546
BspHI TCATGA 1 cut(s) 946
BspLI GGNNCC 1 cut(s) 1186
BspMI ACCTGC 1 cut(s) 2905
BspPI GGATC 2 cut(s) 338, 1898
BspT104I TTCGAA 3 cut(s) 1665, 2575, 2788
BspTI CTTAAG 1 cut(s) 398
BspTNI GGTCTC 3 cut(s) 1437, 2148, 2363
BsrDI GCAATG 1 cut(s) 2981
BsrI ACTGG 4 cut(s) 431, 1466, 1622, 1874
BssECI CCNNGG 2 cut(s) 961, 2282
BssSI CACGAG 1 cut(s) 627
BssT1I CCWWGG 1 cut(s) 961
Bst2BI CACGAG 1 cut(s) 627
Bst2UI CCWGG 4 cut(s) 1268, 1971, 2284, 3372
Bst4CI ACNGT 6 cut(s) 1469, 1766, 2210, 2296, 2945, 3028
Bst6I CTCTTC 2 cut(s) 30, 2186
BstAFI CTTAAG 1 cut(s) 398
BstAPI GCANNNNNTGC 1 cut(s) 3465
BstBAI YACGTR 1 cut(s) 1694
BstBI TTCGAA 3 cut(s) 1665, 2575, 2788
BstC8I GCNNGC 2 cut(s) 1086, 2902
BstF5I GGATG 7 cut(s) 299, 418, 1561, 1829, 3133, 3353, 3514
BstFNI CGCG 2 cut(s) 93, 546
BstH2I RGCGCY 1 cut(s) 890
BstHHI GCGC 4 cut(s) 382, 405, 889, 3534
BstMAI GTCTC 7 cut(s) 168, 1107, 1437, 2148, 2363, 2405, 2618
BstMWI GCNNNNNNNGC 4 cut(s) 303, 1980, 3465, 3531
BstNI CCWGG 4 cut(s) 1268, 1971, 2284, 3372
BstNSI RCATGY 5 cut(s) 356, 1088, 1338, 1598, 1658
BstSCI CCNGG 4 cut(s) 1266, 1969, 2282, 3370
BstSFI CTRYAG 1 cut(s) 1351
BstUI CGCG 2 cut(s) 93, 546
BstV1I GCAGC 7 cut(s) 417, 421, 461, 2237, 2823, 2902, 2973
BstV2I GAAGAC 4 cut(s) 1889, 2189, 3029, 3216
BstX2I RGATCY 4 cut(s) 343, 2584, 2797, 3281
BstXI CCANNNNNNTGG 1 cut(s) 1589
BstYI RGATCY 4 cut(s) 343, 2584, 2797, 3281
BsuI GTATCC 1 cut(s) 3532
BsuRI GGCC 2 cut(s) 422, 497
BtgZI GCGATG 1 cut(s) 108
BtrI CACGTC 1 cut(s) 3015
BtsCI GGATG 7 cut(s) 299, 418, 1561, 1829, 3133, 3353, 3514
BtsI GCAGTG 3 cut(s) 2361, 3042, 3633
BtsIMutI CAGTG 8 cut(s) 1119, 1881, 2301, 2361, 3017, 3033, 3042, 3633
BtuMI TCGCGA 1 cut(s) 546
BveI ACCTGC 1 cut(s) 2905
Cac8I GCNNGC 2 cut(s) 1086, 2902
CciI TCATGA 1 cut(s) 946
CfoI GCGC 4 cut(s) 382, 405, 889, 3534
Cfr13I GGNCC 2 cut(s) 185, 1185
CseI GACGC 1 cut(s) 2893
Csp6I GTAC 6 cut(s) 55, 356, 879, 1459, 2313, 3472
CspCI CAANNNNNGTGG 2 cut(s) 1119, 1154
CviQI GTAC 6 cut(s) 55, 356, 879, 1459, 2313, 3472
DraI TTTAAA 3 cut(s) 564, 1884, 3205
DraIII CACNNNGTG 2 cut(s) 264, 632
DriI GACNNNNNGTC 1 cut(s) 841
EaeI YGGCCR 1 cut(s) 420
Eam1104I CTCTTC 2 cut(s) 30, 2186
Eam1105I GACNNNNNGTC 1 cut(s) 841
EarI CTCTTC 2 cut(s) 30, 2186
Ecl136II GAGCTC 2 cut(s) 1072, 3623
Eco130I CCWWGG 1 cut(s) 961
Eco24I GRGCYC 2 cut(s) 1074, 3625
Eco31I GGTCTC 3 cut(s) 1437, 2148, 2363
Eco47I GGWCC 2 cut(s) 185, 1185
Eco53kI GAGCTC 2 cut(s) 1072, 3623
Eco57I CTGAAG 3 cut(s) 1941, 2210, 3041
Eco88I CYCGRG 1 cut(s) 1521
EcoICRI GAGCTC 2 cut(s) 1072, 3623
EcoO109I RGGNCCY 1 cut(s) 1185
EcoRI GAATTC 2 cut(s) 4, 2230
EcoRII CCWGG 4 cut(s) 1266, 1969, 2282, 3370
EcoT14I CCWWGG 1 cut(s) 961
EcoT38I GRGCYC 2 cut(s) 1074, 3625
ErhI CCWWGG 1 cut(s) 961
Esp3I CGTCTC 1 cut(s) 168
FalI AAGNNNNNCTT 6 cut(s) 987, 1019, 1625, 1657, 3461, 3493
FaqI GGGAC 3 cut(s) 502, 1775, 1910
FauI CCCGC 2 cut(s) 1399, 3299
FauNDI CATATG 1 cut(s) 3568
FbaI TGATCA 2 cut(s) 943, 2376
FblI GTMKAC 1 cut(s) 2182
Fnu4HI GCNGC 7 cut(s) 406, 435, 450, 2251, 2812, 2916, 2987
FokI GGATG 7 cut(s) 306, 425, 1568, 1816, 3140, 3360, 3501
FriOI GRGCYC 2 cut(s) 1074, 3625
Fsp4HI GCNGC 7 cut(s) 406, 435, 450, 2251, 2812, 2916, 2987
FspI TGCGCA 1 cut(s) 3533
GlaI GCGC 4 cut(s) 381, 404, 888, 3533
GluI GCNGC 7 cut(s) 406, 435, 450, 2251, 2812, 2916, 2987
GsuI CTGGAG 5 cut(s) 448, 2453, 2525, 2666, 2738
HaeII RGCGCY 1 cut(s) 890
HaeIII GGCC 2 cut(s) 422, 497
HgaI GACGC 1 cut(s) 2893
HhaI GCGC 4 cut(s) 382, 405, 889, 3534
Hin6I GCGC 4 cut(s) 380, 403, 887, 3532
HinP1I GCGC 4 cut(s) 380, 403, 887, 3532
HincII GTYRAC 4 cut(s) 1018, 2865, 3511, 3670
HindII GTYRAC 4 cut(s) 1018, 2865, 3511, 3670
HindIII AAGCTT 2 cut(s) 1981, 2021
HpaI GTTAAC 1 cut(s) 2865
Hpy166II GTNNAC 6 cut(s) 395, 1018, 2183, 2865, 3511, 3670
Hpy8I GTNNAC 6 cut(s) 395, 1018, 2183, 2865, 3511, 3670
Hpy99I CGWCG 1 cut(s) 1200
HpyAV CCTTC 8 cut(s) 53, 203, 877, 1306, 2007, 2139, 2240, 3739
HpyCH4III ACNGT 6 cut(s) 1469, 1766, 2210, 2296, 2945, 3028
HpyCH4IV ACGT 2 cut(s) 1693, 3014
HpyF10VI GCNNNNNNNGC 4 cut(s) 303, 1980, 3465, 3531
HpySE526I ACGT 2 cut(s) 1693, 3014
HspAI GCGC 4 cut(s) 380, 403, 887, 3532
Ksp22I TGATCA 2 cut(s) 943, 2376
KspAI GTTAAC 1 cut(s) 2865
LmnI GCTCC 3 cut(s) 2275, 2736, 3620
Lsp1109I GCAGC 7 cut(s) 417, 421, 461, 2237, 2823, 2902, 2973
LweI GCATC 5 cut(s) 85, 284, 2064, 3148, 3775
MaeII ACGT 2 cut(s) 1693, 3014
MaeIII GTNAC 4 cut(s) 1286, 2755, 3015, 3652
MfeI CAATTG 5 cut(s) 1515, 2380, 2553, 2766, 3186
MflI RGATCY 4 cut(s) 343, 2584, 2797, 3281
MhlI GDGCHC 3 cut(s) 1074, 2741, 3625
MlsI TGGCCA 1 cut(s) 422
MluNI TGGCCA 1 cut(s) 422
MlyI GAGTC 7 cut(s) 614, 1879, 1951, 2203, 2407, 2620, 3694
MmeI TCCRAC 3 cut(s) 1629, 1857, 3105
Mox20I TGGCCA 1 cut(s) 422
MscI TGGCCA 1 cut(s) 422
MslI CAYNNNNRTG 2 cut(s) 1083, 3339
Msp20I TGGCCA 1 cut(s) 422
MspA1I CMGCKG 2 cut(s) 2531, 2744
MspCI CTTAAG 1 cut(s) 398
MspR9I CCNGG 4 cut(s) 1268, 1971, 2284, 3372
MunI CAATTG 5 cut(s) 1515, 2380, 2553, 2766, 3186
Mva1269I GAATGC 4 cut(s) 916, 1158, 3139, 3470
MvaI CCWGG 4 cut(s) 1268, 1971, 2284, 3372
MvnI CGCG 2 cut(s) 93, 546
MwoI GCNNNNNNNGC 4 cut(s) 303, 1980, 3465, 3531
NdeI CATATG 1 cut(s) 3568
NlaIV GGNNCC 1 cut(s) 1186
NmeAIII GCCGAG 1 cut(s) 2095
NmuCI GTSAC 1 cut(s) 3015
NruI TCGCGA 1 cut(s) 546
NsbI TGCGCA 1 cut(s) 3533
NspI RCATGY 5 cut(s) 356, 1088, 1338, 1598, 1658
NspV TTCGAA 3 cut(s) 1665, 2575, 2788
PaeI GCATGC 1 cut(s) 1088
PaeR7I CTCGAG 1 cut(s) 1521
PagI TCATGA 1 cut(s) 946
PciI ACATGT 2 cut(s) 352, 1594
PcsI WCGNNNNNNNCGW 1 cut(s) 1699
PctI GAATGC 4 cut(s) 916, 1158, 3139, 3470
Pfl23II CGTACG 1 cut(s) 878
PflFI GACNNNGTC 1 cut(s) 3028
PflMI CCANNNNNTGG 1 cut(s) 2555
PfoI TCCNGGA 1 cut(s) 1266
PkrI GCNGC 7 cut(s) 407, 436, 451, 2252, 2813, 2917, 2988
PleI GAGTC 7 cut(s) 613, 1878, 1950, 2202, 2406, 2619, 3693
PpsI GAGTC 7 cut(s) 613, 1878, 1950, 2202, 2406, 2619, 3693
Ppu21I YACGTR 1 cut(s) 1694
PpuMI RGGWCCY 1 cut(s) 1185
PscI ACATGT 2 cut(s) 352, 1594
PsiI TTATAA 1 cut(s) 980
Psp124BI GAGCTC 2 cut(s) 1074, 3625
Psp5II RGGWCCY 1 cut(s) 1185
Psp6I CCWGG 4 cut(s) 1266, 1969, 2282, 3370
PspGI CCWGG 4 cut(s) 1266, 1969, 2282, 3370
PspLI CGTACG 1 cut(s) 878
PspN4I GGNNCC 1 cut(s) 1186
PspPI GGNCC 2 cut(s) 185, 1185
PspPPI RGGWCCY 1 cut(s) 1185
PsuI RGATCY 4 cut(s) 343, 2584, 2797, 3281
PsyI GACNNNGTC 1 cut(s) 3028
RruI TCGCGA 1 cut(s) 546
RsaI GTAC 6 cut(s) 56, 357, 880, 1460, 2314, 3473
RsaNI GTAC 6 cut(s) 55, 356, 879, 1459, 2313, 3472
RseI CAYNNNNRTG 2 cut(s) 1083, 3339
SacI GAGCTC 2 cut(s) 1074, 3625
SatI GCNGC 7 cut(s) 406, 435, 450, 2251, 2812, 2916, 2987
Sau96I GGNCC 2 cut(s) 185, 1185
SchI GAGTC 7 cut(s) 614, 1879, 1951, 2203, 2407, 2620, 3694
ScrFI CCNGG 4 cut(s) 1268, 1971, 2284, 3372
SduI GDGCHC 3 cut(s) 1074, 2741, 3625
SfaNI GCATC 5 cut(s) 85, 284, 2064, 3148, 3775
SfcI CTRYAG 1 cut(s) 1351
Sfr274I CTCGAG 1 cut(s) 1521
SfuI TTCGAA 3 cut(s) 1665, 2575, 2788
SinI GGWCC 2 cut(s) 185, 1185
SlaI CTCGAG 1 cut(s) 1521
SmiMI CAYNNNNRTG 2 cut(s) 1083, 3339
SmlI CTYRAG 5 cut(s) 398, 1004, 1067, 1129, 1521
SmoI CTYRAG 5 cut(s) 398, 1004, 1067, 1129, 1521
SpeI ACTAGT 2 cut(s) 226, 3485
SphI GCATGC 1 cut(s) 1088
SsiI CCGC 4 cut(s) 1406, 2531, 2744, 3306
SspI AATATT 2 cut(s) 859, 1951
SstI GAGCTC 2 cut(s) 1074, 3625
StyD4I CCNGG 4 cut(s) 1266, 1969, 2282, 3370
StyI CCWWGG 1 cut(s) 961
TaaI ACNGT 6 cut(s) 1469, 1766, 2210, 2296, 2945, 3028
TaiI ACGT 2 cut(s) 1696, 3017
TatI WGTACW 1 cut(s) 3471
TscAI CASTG 8 cut(s) 1126, 1881, 2301, 2368, 3024, 3033, 3049, 3640
TseFI GTSAC 1 cut(s) 3015
TseI GCWGC 7 cut(s) 405, 434, 449, 2250, 2811, 2915, 2986
Tsp45I GTSAC 1 cut(s) 3015
TspGWI ACGGA 6 cut(s) 831, 1184, 1903, 3447, 3671, 3697
TspRI CASTG 8 cut(s) 1126, 1881, 2301, 2368, 3024, 3033, 3049, 3640
Tth111I GACNNNGTC 1 cut(s) 3028
Van91I CCANNNNNTGG 1 cut(s) 2555
Vha464I CTTAAG 1 cut(s) 398
VpaK11BI GGWCC 2 cut(s) 185, 1185
XbaI TCTAGA 2 cut(s) 196, 2242
XceI RCATGY 5 cut(s) 356, 1088, 1338, 1598, 1658
XcmI CCANNNNNNNNNTGG 2 cut(s) 2412, 2625
XhoI CTCGAG 1 cut(s) 1521
XmiI GTMKAC 1 cut(s) 2182
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.