Disease resistance protein (TIR-NBS-LRR class)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1043 |
| AarI | CACCTGC | 1 cut(s) | 1201 |
| AbsI | CCTCGAGG | 1 cut(s) | 266 |
| Acc16I | TGCGCA | 1 cut(s) | 2044 |
| Acc36I | ACCTGC | 1 cut(s) | 1201 |
| AccB1I | GGYRCC | 2 cut(s) | 815, 2332 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1417 |
| AccI | GTMKAC | 1 cut(s) | 1944 |
| AccIII | TCCGGA | 1 cut(s) | 1330 |
| AciI | CCGC | 4 cut(s) | 254, 637, 940, 2450 |
| AclWI | GGATC | 7 cut(s) | 245, 300, 441, 1402, 1571, 1584, 1826 |
| AcoI | YGGCCR | 2 cut(s) | 1099, 1845 |
| AcuI | CTGAAG | 4 cut(s) | 53, 651, 1136, 1470 |
| AcvI | CACGTG | 1 cut(s) | 248 |
| AdeI | CACNNNGTG | 1 cut(s) | 1405 |
| AfaI | GTAC | 3 cut(s) | 302, 1447, 1533 |
| AfeI | AGCGCT | 2 cut(s) | 126, 137 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 260, 295, 430, 914, 1337, 1417 |
| AflII | CTTAAG | 2 cut(s) | 1606, 2536 |
| AhlI | ACTAGT | 2 cut(s) | 479, 1081 |
| AjiI | CACGTC | 1 cut(s) | 973 |
| AjnI | CCWGG | 4 cut(s) | 1024, 1456, 1760, 1842 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1002, 1034 |
| AleI | CACNNNNGTG | 1 cut(s) | 1482 |
| Alw21I | GWGCWC | 2 cut(s) | 80, 178 |
| Alw26I | GTCTC | 4 cut(s) | 1152, 2309, 2412, 2483 |
| AlwI | GGATC | 7 cut(s) | 245, 300, 441, 1402, 1571, 1584, 1826 |
| Ama87I | CYCGRG | 2 cut(s) | 266, 1050 |
| Aor13HI | TCCGGA | 1 cut(s) | 1330 |
| Aor51HI | AGCGCT | 2 cut(s) | 126, 137 |
| AoxI | GGCC | 4 cut(s) | 262, 1099, 1792, 1845 |
| ApeKI | GCWGC | 5 cut(s) | 122, 1226, 1313, 2040, 2506 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 89, 121 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2220 |
| AspA2I | CCTAGG | 1 cut(s) | 1966 |
| AspLEI | GCGC | 3 cut(s) | 127, 138, 2045 |
| AspS9I | GGNCC | 2 cut(s) | 336, 1022 |
| AsuC2I | CCSGG | 1 cut(s) | 1436 |
| AsuHPI | GGTGA | 5 cut(s) | 278, 403, 527, 746, 1496 |
| AsuII | TTCGAA | 1 cut(s) | 774 |
| AvaI | CYCGRG | 2 cut(s) | 266, 1050 |
| AvaII | GGWCC | 2 cut(s) | 336, 1022 |
| AvrII | CCTAGG | 1 cut(s) | 1966 |
| BaeGI | GKGCMC | 1 cut(s) | 2337 |
| BalI | TGGCCA | 1 cut(s) | 1101 |
| BamHI | GGATCC | 1 cut(s) | 1576 |
| BanI | GGYRCC | 2 cut(s) | 815, 2332 |
| BanII | GRGCYC | 1 cut(s) | 2367 |
| BbrPI | CACGTG | 1 cut(s) | 248 |
| BbsI | GAAGAC | 4 cut(s) | 39, 116, 639, 1079 |
| Bbv12I | GWGCWC | 2 cut(s) | 80, 178 |
| BbvI | GCAGC | 5 cut(s) | 134, 1213, 1300, 2027, 2493 |
| BccI | CCATC | 6 cut(s) | 164, 254, 368, 1726, 2146, 2206 |
| BceAI | ACGGC | 2 cut(s) | 1507, 2494 |
| BciT130I | CCWGG | 4 cut(s) | 1026, 1458, 1762, 1844 |
| BcnI | CCSGG | 1 cut(s) | 1436 |
| BcoDI | GTCTC | 4 cut(s) | 1152, 2309, 2412, 2483 |
| BcuI | ACTAGT | 2 cut(s) | 479, 1081 |
| BfaI | CTAG | 6 cut(s) | 480, 531, 878, 1082, 1655, 1967 |
| BfmI | CTRYAG | 7 cut(s) | 120, 912, 1185, 1227, 1903, 2178, 2468 |
| BfoI | RGCGCY | 2 cut(s) | 128, 139 |
| BfrI | CTTAAG | 2 cut(s) | 1606, 2536 |
| BfuAI | ACCTGC | 1 cut(s) | 1201 |
| BglII | AGATCT | 1 cut(s) | 1960 |
| BisI | GCNGC | 5 cut(s) | 123, 1227, 1314, 2041, 2507 |
| BlnI | CCTAGG | 1 cut(s) | 1966 |
| BlsI | GCNGC | 5 cut(s) | 124, 1228, 1315, 2042, 2508 |
| Bme1390I | CCNGG | 5 cut(s) | 1026, 1436, 1458, 1762, 1844 |
| Bme18I | GGWCC | 2 cut(s) | 336, 1022 |
| BmeT110I | CYCGRG | 2 cut(s) | 266, 1050 |
| BmgBI | CACGTC | 1 cut(s) | 973 |
| BmgT120I | GGNCC | 2 cut(s) | 336, 1022 |
| BmiI | GGNNCC | 4 cut(s) | 817, 938, 1578, 2334 |
| BmrFI | CCNGG | 5 cut(s) | 1026, 1436, 1458, 1762, 1844 |
| BmrI | ACTGGG | 1 cut(s) | 2370 |
| BmsI | GCATC | 4 cut(s) | 1386, 1587, 1660, 2234 |
| BmuI | ACTGGG | 1 cut(s) | 2370 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1494 |
| BpiI | GAAGAC | 4 cut(s) | 39, 116, 639, 1079 |
| BpmI | CTGGAG | 3 cut(s) | 186, 213, 1783 |
| Bpu14I | TTCGAA | 1 cut(s) | 774 |
| BpuEI | CTTGAG | 4 cut(s) | 62, 327, 1566, 1757 |
| BpuMI | CCSGG | 1 cut(s) | 1436 |
| Bsa29I | ATCGAT | 1 cut(s) | 1821 |
| BsaAI | YACGTR | 1 cut(s) | 248 |
| BsaBI | GATNNNNATC | 1 cut(s) | 8 |
| BsaJI | CCNNGG | 4 cut(s) | 424, 1760, 1966, 2276 |
| BsaWI | WCCGGW | 1 cut(s) | 1330 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 260, 295, 430, 914, 1337, 1417 |
| Bse1I | ACTGG | 5 cut(s) | 61, 498, 619, 1064, 2365 |
| Bse8I | GATNNNNATC | 1 cut(s) | 8 |
| BseAI | TCCGGA | 1 cut(s) | 1330 |
| BseBI | CCWGG | 4 cut(s) | 1026, 1458, 1762, 1844 |
| BseCI | ATCGAT | 1 cut(s) | 1821 |
| BseDI | CCNNGG | 4 cut(s) | 424, 1760, 1966, 2276 |
| BseGI | GGATG | 5 cut(s) | 277, 1339, 1401, 1602, 2249 |
| BseJI | GATNNNNATC | 1 cut(s) | 8 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 260, 295, 430, 914, 1337, 1417 |
| BseMII | CTCAG | 2 cut(s) | 233, 2372 |
| BseNI | ACTGG | 5 cut(s) | 61, 498, 619, 1064, 2365 |
| BseSI | GKGCMC | 1 cut(s) | 2337 |
| BseXI | GCAGC | 5 cut(s) | 134, 1213, 1300, 2027, 2493 |
| BsgI | GTGCAG | 1 cut(s) | 207 |
| BshFI | GGCC | 4 cut(s) | 264, 1101, 1794, 1847 |
| BshNI | GGYRCC | 2 cut(s) | 815, 2332 |
| BshVI | ATCGAT | 1 cut(s) | 1821 |
| BsiHKAI | GWGCWC | 2 cut(s) | 80, 178 |
| BsiHKCI | CYCGRG | 2 cut(s) | 266, 1050 |
| BsiSI | CCGG | 2 cut(s) | 1331, 1435 |
| BslFI | GGGAC | 2 cut(s) | 103, 896 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 260, 295, 430, 914, 1337, 1417 |
| BsmAI | GTCTC | 4 cut(s) | 1152, 2309, 2412, 2483 |
| BsmBI | CGTCTC | 1 cut(s) | 2483 |
| BsmFI | GGGAC | 2 cut(s) | 103, 896 |
| BsmI | GAATGC | 1 cut(s) | 1586 |
| BsnI | GGCC | 4 cut(s) | 264, 1101, 1794, 1847 |
| BsoBI | CYCGRG | 2 cut(s) | 266, 1050 |
| Bsp119I | TTCGAA | 1 cut(s) | 774 |
| Bsp1286I | GDGCHC | 4 cut(s) | 80, 178, 2337, 2367 |
| Bsp13I | TCCGGA | 1 cut(s) | 1330 |
| Bsp1407I | TGTACA | 1 cut(s) | 300 |
| Bsp19I | CCATGG | 1 cut(s) | 2276 |
| BspACI | CCGC | 4 cut(s) | 254, 637, 940, 2450 |
| BspANI | GGCC | 4 cut(s) | 264, 1101, 1794, 1847 |
| BspCNI | CTCAG | 2 cut(s) | 232, 2373 |
| BspDI | ATCGAT | 1 cut(s) | 1821 |
| BspEI | TCCGGA | 1 cut(s) | 1330 |
| BspHI | TCATGA | 1 cut(s) | 436 |
| BspLI | GGNNCC | 4 cut(s) | 817, 938, 1578, 2334 |
| BspMAI | CTGCAG | 4 cut(s) | 124, 1231, 2182, 2472 |
| BspMI | ACCTGC | 1 cut(s) | 1201 |
| BspPI | GGATC | 7 cut(s) | 245, 300, 441, 1402, 1571, 1584, 1826 |
| BspQI | GCTCTTC | 3 cut(s) | 1163, 1446, 2496 |
| BspT104I | TTCGAA | 1 cut(s) | 774 |
| BspT107I | GGYRCC | 2 cut(s) | 815, 2332 |
| BspTI | CTTAAG | 2 cut(s) | 1606, 2536 |
| BsrGI | TGTACA | 1 cut(s) | 300 |
| BsrI | ACTGG | 5 cut(s) | 61, 498, 619, 1064, 2365 |
| BssECI | CCNNGG | 4 cut(s) | 424, 1760, 1966, 2276 |
| BssNAI | GTATAC | 1 cut(s) | 1945 |
| BssT1I | CCWWGG | 3 cut(s) | 424, 1966, 2276 |
| Bst1107I | GTATAC | 1 cut(s) | 1945 |
| Bst2UI | CCWGG | 4 cut(s) | 1026, 1458, 1762, 1844 |
| Bst4CI | ACNGT | 4 cut(s) | 785, 843, 1567, 2332 |
| Bst6I | CTCTTC | 5 cut(s) | 769, 1155, 1163, 1446, 2496 |
| BstAFI | CTTAAG | 2 cut(s) | 1606, 2536 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1223 |
| BstAUI | TGTACA | 1 cut(s) | 300 |
| BstBAI | YACGTR | 1 cut(s) | 248 |
| BstBI | TTCGAA | 1 cut(s) | 774 |
| BstC8I | GCNNGC | 3 cut(s) | 738, 1099, 1174 |
| BstDEI | CTNAG | 5 cut(s) | 219, 1622, 1826, 2161, 2381 |
| BstDSI | CCRYGG | 1 cut(s) | 2276 |
| BstF5I | GGATG | 5 cut(s) | 277, 1339, 1401, 1602, 2249 |
| BstH2I | RGCGCY | 2 cut(s) | 128, 139 |
| BstHHI | GCGC | 3 cut(s) | 127, 138, 2045 |
| BstMAI | GTCTC | 4 cut(s) | 1152, 2309, 2412, 2483 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 133, 214, 824, 1223, 1545, 1756 |
| BstNI | CCWGG | 4 cut(s) | 1026, 1458, 1762, 1844 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1494 |
| BstSCI | CCNGG | 5 cut(s) | 1024, 1434, 1456, 1760, 1842 |
| BstSFI | CTRYAG | 7 cut(s) | 120, 912, 1185, 1227, 1903, 2178, 2468 |
| BstSLI | GKGCMC | 1 cut(s) | 2337 |
| BstV1I | GCAGC | 5 cut(s) | 134, 1213, 1300, 2027, 2493 |
| BstV2I | GAAGAC | 4 cut(s) | 39, 116, 639, 1079 |
| BstX2I | RGATCY | 3 cut(s) | 305, 1576, 1960 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1843 |
| BstYI | RGATCY | 3 cut(s) | 305, 1576, 1960 |
| BstZ17I | GTATAC | 1 cut(s) | 1945 |
| Bsu15I | ATCGAT | 1 cut(s) | 1821 |
| BsuRI | GGCC | 4 cut(s) | 264, 1101, 1794, 1847 |
| BsuTUI | ATCGAT | 1 cut(s) | 1821 |
| BtgI | CCRYGG | 1 cut(s) | 2276 |
| BtrI | CACGTC | 1 cut(s) | 973 |
| BtsCI | GGATG | 5 cut(s) | 277, 1339, 1401, 1602, 2249 |
| BtsIMutI | CAGTG | 3 cut(s) | 505, 781, 1353 |
| BveI | ACCTGC | 1 cut(s) | 1201 |
| Cac8I | GCNNGC | 3 cut(s) | 738, 1099, 1174 |
| CciI | TCATGA | 1 cut(s) | 436 |
| CfoI | GCGC | 3 cut(s) | 127, 138, 2045 |
| Cfr13I | GGNCC | 2 cut(s) | 336, 1022 |
| ClaI | ATCGAT | 1 cut(s) | 1821 |
| Csp6I | GTAC | 3 cut(s) | 301, 1446, 1532 |
| CviAII | CATG | 8 cut(s) | 200, 437, 1103, 1223, 1499, 2240, 2277, 2350 |
| CviQI | GTAC | 3 cut(s) | 301, 1446, 1532 |
| DdeI | CTNAG | 5 cut(s) | 219, 1622, 1826, 2161, 2381 |
| DraI | TTTAAA | 1 cut(s) | 2169 |
| DraIII | CACNNNGTG | 1 cut(s) | 1405 |
| EaeI | YGGCCR | 2 cut(s) | 1099, 1845 |
| Eam1104I | CTCTTC | 5 cut(s) | 769, 1155, 1163, 1446, 2496 |
| EarI | CTCTTC | 5 cut(s) | 769, 1155, 1163, 1446, 2496 |
| Eco130I | CCWWGG | 3 cut(s) | 424, 1966, 2276 |
| Eco24I | GRGCYC | 1 cut(s) | 2367 |
| Eco47I | GGWCC | 2 cut(s) | 336, 1022 |
| Eco47III | AGCGCT | 2 cut(s) | 126, 137 |
| Eco57I | CTGAAG | 4 cut(s) | 53, 651, 1136, 1470 |
| Eco72I | CACGTG | 1 cut(s) | 248 |
| Eco88I | CYCGRG | 2 cut(s) | 266, 1050 |
| EcoRII | CCWGG | 4 cut(s) | 1024, 1456, 1760, 1842 |
| EcoT14I | CCWWGG | 3 cut(s) | 424, 1966, 2276 |
| EcoT22I | ATGCAT | 1 cut(s) | 1602 |
| EcoT38I | GRGCYC | 1 cut(s) | 2367 |
| ErhI | CCWWGG | 3 cut(s) | 424, 1966, 2276 |
| Esp3I | CGTCTC | 1 cut(s) | 2483 |
| FaeI | CATG | 8 cut(s) | 203, 440, 1106, 1226, 1502, 2243, 2280, 2353 |
| FaqI | GGGAC | 2 cut(s) | 103, 896 |
| FatI | CATG | 8 cut(s) | 199, 436, 1102, 1222, 1498, 2239, 2276, 2349 |
| FauNDI | CATATG | 1 cut(s) | 1755 |
| FblI | GTMKAC | 1 cut(s) | 1944 |
| Fnu4HI | GCNGC | 5 cut(s) | 123, 1227, 1314, 2041, 2507 |
| FokI | GGATG | 5 cut(s) | 284, 1346, 1408, 1609, 2256 |
| FriOI | GRGCYC | 1 cut(s) | 2367 |
| Fsp4HI | GCNGC | 5 cut(s) | 123, 1227, 1314, 2041, 2507 |
| FspBI | CTAG | 6 cut(s) | 480, 531, 878, 1082, 1655, 1967 |
| FspI | TGCGCA | 1 cut(s) | 2044 |
| GlaI | GCGC | 3 cut(s) | 126, 137, 2044 |
| GluI | GCNGC | 5 cut(s) | 123, 1227, 1314, 2041, 2507 |
| GsuI | CTGGAG | 3 cut(s) | 186, 213, 1783 |
| HaeII | RGCGCY | 2 cut(s) | 128, 139 |
| HaeIII | GGCC | 4 cut(s) | 264, 1101, 1794, 1847 |
| HapII | CCGG | 2 cut(s) | 1331, 1435 |
| HhaI | GCGC | 3 cut(s) | 127, 138, 2045 |
| Hin1II | CATG | 8 cut(s) | 203, 440, 1106, 1226, 1502, 2243, 2280, 2353 |
| Hin6I | GCGC | 3 cut(s) | 125, 136, 2043 |
| HinP1I | GCGC | 3 cut(s) | 125, 136, 2043 |
| HincII | GTYRAC | 2 cut(s) | 1561, 2377 |
| HindII | GTYRAC | 2 cut(s) | 1561, 2377 |
| HindIII | AAGCTT | 1 cut(s) | 2087 |
| HpaI | GTTAAC | 1 cut(s) | 1561 |
| HpaII | CCGG | 2 cut(s) | 1331, 1435 |
| HphI | GGTGA | 5 cut(s) | 278, 403, 527, 746, 1496 |
| Hpy188I | TCNGA | 7 cut(s) | 72, 222, 283, 447, 508, 547, 2100 |
| Hpy99I | CGWCG | 1 cut(s) | 974 |
| HpyAV | CCTTC | 5 cut(s) | 77, 1081, 1280, 1685, 2073 |
| HpyCH4III | ACNGT | 4 cut(s) | 785, 843, 1567, 2332 |
| HpyCH4IV | ACGT | 2 cut(s) | 247, 972 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 133, 214, 824, 1223, 1545, 1756 |
| HpyF3I | CTNAG | 5 cut(s) | 219, 1622, 1826, 2161, 2381 |
| HpySE526I | ACGT | 2 cut(s) | 247, 972 |
| Hsp92II | CATG | 8 cut(s) | 203, 440, 1106, 1226, 1502, 2243, 2280, 2353 |
| HspAI | GCGC | 3 cut(s) | 125, 136, 2043 |
| Kpn2I | TCCGGA | 1 cut(s) | 1330 |
| KspAI | GTTAAC | 1 cut(s) | 1561 |
| LguI | GCTCTTC | 3 cut(s) | 1163, 1446, 2496 |
| LmnI | GCTCC | 5 cut(s) | 181, 626, 824, 942, 1764 |
| Lsp1109I | GCAGC | 5 cut(s) | 134, 1213, 1300, 2027, 2493 |
| LweI | GCATC | 4 cut(s) | 1386, 1587, 1660, 2234 |
| MaeI | CTAG | 6 cut(s) | 480, 531, 878, 1082, 1655, 1967 |
| MaeII | ACGT | 2 cut(s) | 247, 972 |
| MaeIII | GTNAC | 2 cut(s) | 1697, 2139 |
| MflI | RGATCY | 3 cut(s) | 305, 1576, 1960 |
| MhlI | GDGCHC | 4 cut(s) | 80, 178, 2337, 2367 |
| MlsI | TGGCCA | 1 cut(s) | 1101 |
| MluNI | TGGCCA | 1 cut(s) | 1101 |
| MlyI | GAGTC | 6 cut(s) | 53, 512, 753, 1069, 1154, 2462 |
| MmeI | TCCRAC | 5 cut(s) | 604, 932, 1318, 1554, 1834 |
| Mox20I | TGGCCA | 1 cut(s) | 1101 |
| Mph1103I | ATGCAT | 1 cut(s) | 1602 |
| MroI | TCCGGA | 1 cut(s) | 1330 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2220 |
| MscI | TGGCCA | 1 cut(s) | 1101 |
| MslI | CAYNNNNRTG | 9 cut(s) | 389, 1167, 1358, 1394, 1482, 1568, 1595, 1638, 2354 |
| Msp20I | TGGCCA | 1 cut(s) | 1101 |
| MspCI | CTTAAG | 2 cut(s) | 1606, 2536 |
| MspI | CCGG | 2 cut(s) | 1331, 1435 |
| MspR9I | CCNGG | 5 cut(s) | 1026, 1436, 1458, 1762, 1844 |
| Mva1269I | GAATGC | 1 cut(s) | 1586 |
| MvaI | CCWGG | 4 cut(s) | 1026, 1458, 1762, 1844 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 133, 214, 824, 1223, 1545, 1756 |
| NciI | CCSGG | 1 cut(s) | 1436 |
| NcoI | CCATGG | 1 cut(s) | 2276 |
| NdeI | CATATG | 1 cut(s) | 1755 |
| NlaIII | CATG | 8 cut(s) | 203, 440, 1106, 1226, 1502, 2243, 2280, 2353 |
| NlaIV | GGNNCC | 4 cut(s) | 817, 938, 1578, 2334 |
| NsbI | TGCGCA | 1 cut(s) | 2044 |
| NsiI | ATGCAT | 1 cut(s) | 1602 |
| NspV | TTCGAA | 1 cut(s) | 774 |
| OliI | CACNNNNGTG | 1 cut(s) | 1482 |
| PaeR7I | CTCGAG | 2 cut(s) | 266, 1050 |
| PagI | TCATGA | 1 cut(s) | 436 |
| PaqCI | CACCTGC | 1 cut(s) | 1201 |
| PciSI | GCTCTTC | 3 cut(s) | 1163, 1446, 2496 |
| PctI | GAATGC | 1 cut(s) | 1586 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2220 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1417 |
| PfoI | TCCNGGA | 2 cut(s) | 1024, 1434 |
| PkrI | GCNGC | 5 cut(s) | 124, 1228, 1315, 2042, 2508 |
| PleI | GAGTC | 6 cut(s) | 52, 511, 753, 1069, 1153, 2461 |
| PmaCI | CACGTG | 1 cut(s) | 248 |
| PmlI | CACGTG | 1 cut(s) | 248 |
| PpsI | GAGTC | 6 cut(s) | 52, 511, 753, 1069, 1153, 2461 |
| Ppu21I | YACGTR | 1 cut(s) | 248 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1494 |
| PsiI | TTATAA | 1 cut(s) | 1043 |
| Psp6I | CCWGG | 4 cut(s) | 1024, 1456, 1760, 1842 |
| PspCI | CACGTG | 1 cut(s) | 248 |
| PspGI | CCWGG | 4 cut(s) | 1024, 1456, 1760, 1842 |
| PspN4I | GGNNCC | 4 cut(s) | 817, 938, 1578, 2334 |
| PspPI | GGNCC | 2 cut(s) | 336, 1022 |
| PspXI | VCTCGAGB | 1 cut(s) | 266 |
| PstI | CTGCAG | 4 cut(s) | 124, 1231, 2182, 2472 |
| PsuI | RGATCY | 3 cut(s) | 305, 1576, 1960 |
| RsaI | GTAC | 3 cut(s) | 302, 1447, 1533 |
| RsaNI | GTAC | 3 cut(s) | 301, 1446, 1532 |
| RseI | CAYNNNNRTG | 9 cut(s) | 389, 1167, 1358, 1394, 1482, 1568, 1595, 1638, 2354 |
| SapI | GCTCTTC | 3 cut(s) | 1163, 1446, 2496 |
| SatI | GCNGC | 5 cut(s) | 123, 1227, 1314, 2041, 2507 |
| Sau96I | GGNCC | 2 cut(s) | 336, 1022 |
| SchI | GAGTC | 6 cut(s) | 53, 512, 753, 1069, 1154, 2462 |
| ScrFI | CCNGG | 5 cut(s) | 1026, 1436, 1458, 1762, 1844 |
| SduI | GDGCHC | 4 cut(s) | 80, 178, 2337, 2367 |
| SfaNI | GCATC | 4 cut(s) | 1386, 1587, 1660, 2234 |
| SfcI | CTRYAG | 7 cut(s) | 120, 912, 1185, 1227, 1903, 2178, 2468 |
| Sfr274I | CTCGAG | 2 cut(s) | 266, 1050 |
| SfuI | TTCGAA | 1 cut(s) | 774 |
| SinI | GGWCC | 2 cut(s) | 336, 1022 |
| SlaI | CTCGAG | 2 cut(s) | 266, 1050 |
| SmiI | ATTTAAAT | 1 cut(s) | 2169 |
| SmiMI | CAYNNNNRTG | 9 cut(s) | 389, 1167, 1358, 1394, 1482, 1568, 1595, 1638, 2354 |
| SmlI | CTYRAG | 8 cut(s) | 41, 266, 342, 1050, 1581, 1606, 1772, 2536 |
| SmoI | CTYRAG | 8 cut(s) | 41, 266, 342, 1050, 1581, 1606, 1772, 2536 |
| SpeI | ACTAGT | 2 cut(s) | 479, 1081 |
| SsiI | CCGC | 4 cut(s) | 254, 637, 940, 2450 |
| SspMI | CTAG | 6 cut(s) | 480, 531, 878, 1082, 1655, 1967 |
| StyD4I | CCNGG | 5 cut(s) | 1024, 1434, 1456, 1760, 1842 |
| StyI | CCWWGG | 3 cut(s) | 424, 1966, 2276 |
| SwaI | ATTTAAAT | 1 cut(s) | 2169 |
| TaaI | ACNGT | 4 cut(s) | 785, 843, 1567, 2332 |
| TaiI | ACGT | 2 cut(s) | 250, 975 |
| TaqI | TCGA | 7 cut(s) | 107, 267, 774, 1051, 1821, 2117, 2267 |
| TatI | WGTACW | 3 cut(s) | 300, 1445, 1531 |
| TscAI | CASTG | 3 cut(s) | 505, 788, 1360 |
| TseI | GCWGC | 5 cut(s) | 122, 1226, 1313, 2040, 2506 |
| TspGWI | ACGGA | 1 cut(s) | 1408 |
| TspRI | CASTG | 3 cut(s) | 505, 788, 1360 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1417 |
| Vha464I | CTTAAG | 2 cut(s) | 1606, 2536 |
| VpaK11BI | GGWCC | 2 cut(s) | 336, 1022 |
| XbaI | TCTAGA | 1 cut(s) | 1654 |
| XhoI | CTCGAG | 2 cut(s) | 266, 1050 |
| XmaJI | CCTAGG | 1 cut(s) | 1966 |
| XmiI | GTMKAC | 1 cut(s) | 1944 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2220 |
| XspI | CTAG | 6 cut(s) | 480, 531, 878, 1082, 1655, 1967 |
| Zsp2I | ATGCAT | 1 cut(s) | 1602 |